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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13447#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 3329 fasta sequence
[CTTCCTCTCCTCATCAGTCCTCACGGTCTCTCTCGCTCGCTCACGCAGTCTCTCACCACGACTCTCACGACCTCCCCCTGACCTGACCCAGAGGAGCAGGAGAGAGCATAGCACGGCCTGCACGGATCGAGCAGCGGCAGCAGGAGCTCGTCGCCTCTGCTTAAACCCCCCCCC-CCCCCCAATATCGGTCTCTCGCCTTGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACAGCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGCTTCTCTCTCTCTTTGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGAAGGAGGAAGGGGGGTGACGAGGGTGCTGCTGGTGGACGACTCGCCGGTGGACAGGAGGGTGGTGCAGCTCCTCCTCAGCAGCAGCGCATGCGCCGGCTCATTCCACGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGAGCAGGCCATCGACATGGTGCTCACCGACTACTGCATGCCTGAGATGACTGGTTATGAGCTTCTCAAAGCCATCAAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGATGCATGAATGCTGGTGCTGAAGATTTCATCGTAAAGCCTCTTCAAAGCAAGGACGTACAGCGTCTCAGGAACTGCTCGCCGGCGAACACGCAGTGCTGCGACGCCGGGAGCGACGGCAAGCCGCCGCTGCTGCTGCTGCCATCGGACCACGTCGTCGTCGACGCCACCGCCGCGTCGCCGCCGCCGCCGCCGTCCCGGCGTCGGGCGCACTTCGCTGGAGTTGCCATGGTCCTGCACTCGTCGAGCGTCGAGCTGTCACATTACTTCCCTTTCCTCTTCAAGTTCATCCTGCTGGTGTACGCCATCCTGTGCCTGGGTGAGCTGCTGCACAGATGGTCAAACGGCTGCTT-CCTCAACC-TGTGGTGTGCTTGACGAATG-AAGCAACCGGTGCAGTCCAAATGC-AAAGGCAGGCTGCAACTGGC-AAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCACTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGAAGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTTTGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATGAGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCAGAGAGCTTTTTCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTTCAGATCCCATGAGAAAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTGATGGGAAAAGAAACAAAAATTGCAGATATCATAGTACACTTTCGCCTCATTTTTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAATTCGTTCAGTATATCTTCCTTGTATGGGCCGGAATCATGCAGGACCTTAATAACATGTTTAACCTGAGCCGTCTCATGTACAAGATAATTTCCTATAGCTGCCCCAAAACCAGGATCTAAGAAGTAGTGGCAGCTGTATGTTGTCACTGGGAGGTAACCACGCTGGATCTTGTGCTCTCCTTGAGCACCTGCCTCCACCTTACTCAGGTTCAGTTCTATAGCTGCTTCAATTGCCTGATAATAGCAAGCTTCAAAATGCAAATTGGGGAAATAAGCATCTGGCAGACAGCCCCATAAGCGGCCAAACAATGTGTCACCTCCAATAAGGGTAAGAGNCCCGGCAACAT-GGTTATCGGCATG-TTCAGCAACAA-TAAGCATCACCTTGTCACCCATCNTTTCTCCCAAGCGGTGAAAGAATTCCCTTGTCAAGTATGGTCTGCCCCAGTGATTAT-CAGTTGT-GTTG-CGGTAGGACTTAT-AAAAGGTGT-CCC-AATGCTCGCTCTTTATCT-CATCT-CCAC-GAAGTCGCTT-CATTTT-C-AAATTTT-GAG-CAGGAATCTTTTTACGTTCTTGTCT-GATATTCTTCCGTTT-GGGTTGCTT-CAAATCC-ATTAAAAACTC-GT-CAAAACTTCTGTAATCTCGATTTCT-CCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTAGTATTCGAGTCCATAGCTATAGTAAGCTTCTGCCCATGATTGATCAAATACAAACTCTCCCCTTGAATGGCTTTTCAGGTAAAGTGGGACAACACCAACGACAGTTTCATTCTCATCCCGTGCAACAACATGCAGAGGTAACCACCCTGTTTCCTTCACTGCAGAACCCGATTCCTCTAAGCTTGAGAGGAATGCGTGGGTCAGAAAAGGATTAAAATTGTCAGGATCAACTGAATCAACCGCACAGGCATCCCAATCTGCTGAAGGAATGTCCATAATAGAAGAAACAACAGCAACAGAAACCTCACGTGGCTTGGTGTCTGCCTCTGAGGCTGACCCTGTAAGCGTATATGATTCAGCAGATGGGTTCAATTCACGTGTTCTTGTGTCTCCCTTAATCCACCCAAAAATTGCAGTAACCTTTAACTGCAATCCCGATCTTCGGAAGCCTAGATTCGAAGGCGAATGCCCGCGGCGGCGGCGAGGGTCCGGGCCGAAGAAGGAGGGGGAAGGGTGCCGCGTCGCCACCGCCGGCGAGGCCATCCCCACCTTGCCTCCGGTGAGAGGGAGAGAGAGAGGCTTGGGTGAGGATCGGAGACGAGCAGTGGGTGGTGTTGCGCAACCGACTGACACCT]
[+] EMBL AK072736 [CTTCCTCTCCTCATCAGTCCTCACGGTCTCTCTCGCTCGCTCACGCAGTCTCTCACCACGACTCTCACGACCTCCCCCTGACCTGACCCAGAGGAGCAGGAGAGAGCATAGCACGGCCTGCACGGATCGAGCAGCGGCAGCAGGAGCTCGTCGCCTCTGCTTAAACCCCCCCCC CCCCCCAATATCGGTCTCTCGCCTTGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACAGCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGCTTCTCTCTCTCTTTGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGAAGGAGGAAGGGGGGTGACGAGGGTGCTGCTGGTGGACGACTCGCCGGTGGACAGGAGGGTGGTGCAGCTCCTCCTCAGCAGCAGCGCATGCGCCGGCTCATTCCACGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGAGCAGGCCATCGACATGGTGCTCACCGACTACTGCATGCCTGAGATGACTGGTTATGAGCTTCTCAAAGCCATCAAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGATGCATGAATGCTGGTGCTGAAGATTTCATCGTAAAGCCTCTTCAAAGCAAGGACGTACAGCGTCTCAGGAACTGCTCGCCGGCGAACACGCAGTGCTGCGACGCCGGGAGCGACGGCAAGCCGCCGCTGCTGCTGCTGCCATCGGACCACGTCGTCGTCGACGCCACCGCCGCGTCGCCGCCGCCGCCGCCGTCCCGGCGTCGGGCGCACTTCGCTGGAGTTGCCATGGTCCTGCACTCGTCGAGCGTCGAGCTGTCACATTACTTCCCTTTCCTCTTCAAGTTCATCCTGCTGGTGTACGCCATCCTGTGCCTGGGTGAGCTGCTGCACAGATGGTCAAACGGCTGCTT CCTCAACC TGTGGTGTGCTTGACGAATG AAGCAACCGGTGCAGTCCAAATGC AAAGGCAGGCTGCAACTGGC AAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCACTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGAAGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTTTGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATGAGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCAGAGAGCTTTTTCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTTCAGATCCCATGAGAAAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTGATGGGAAAAGAAACAAAAATTGCAGATATCATAGTACACTTTCGCCTCAACGGTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCT ]
[+] EMBL C72545 [ CACCACGACTCTCACGACCTCCCCCTGACCTGACCCAGAGGAGCAGGAGAGAGCATAGCACGGCCTGCACGGATCGAGCAGCGGCAG AGGAGCTCGTCGCCTCTGCTTAAACCCCCCCCCNNNCCCCAATATCGGTCTCTCGCCTTGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACAGCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGTTTCTCTCTCTCTTTGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGAAGGAGGAAGGGGGtna ]
[+] EMBL AK105815 [ TGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACAGCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGCTTCTCTCTCTCTTTGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGAAGGAGGAAGGGGGGTGACGAGGGTGCTGCTGGTGGACGACTCGCCGGTGGACAGGAGGGTGGTGCAGCTCCTCCTCAGCAGCAGCGCATGCGCCGGCTCATTCCACGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGAGCAGGCCATCGACATGGTGCTCACCGACTACTGCATGCCTGAGATGACTGGTTATGAGCTTCTCAAAGCCATCAAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGATGCATGAATGCTGGTGCTGAAGATTTCATCGTAAAGCCTCTTCAAAGCAAGGACGTACAGCGTCTCAGGAACTGCTCGCCGGCGAACACGCAGTGCTGCGACGCCGGGAGCGACGGCAAGCCGCCGCTGCTGCTGCTGCCATCGGACCACGTCGTCGTCGACGCCACCGCCGCGTCGCCGCCGCCGCCGCCGTCCCGGCGTCGGGCGCACTTCGCTGGAGTTGCCATGGTCCTGCACTCGTCGAGCGTCGAGCTGTCACATTACTTCCCTTTCCTCTTCAAGTTCATCCTGCTGGTGTACGCCATCCTGTGCCTGGGTGAGCTGCTGCACAGATGGTCAAACGGCTGCTT CCTCAACC TGTGGTGTGCTTGACGAATG AAGCAACCGGTGCAGTCCAAATGC AAAGGCAGGCTGCAACTGGC AAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCACTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGAAGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTTTGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATGAGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCAGAGAGCTTTTTCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTTCAGATCCCATGAGAAAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTG ]
[+] EMBL AU093996 [ gtcCAAACGGCTGCTTCCCTCANCCTTGTGGTGTNCTTGACGAATGAAAGCAACCGGTGCAGTCCAAATGCAAAAGGCAGGCTGCAACTGGCAAAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCACTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGAAGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTTTGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATGAGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCAGAGAGCTTTTNCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTTCAGATCCCATGAGNNAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTGATGGGAAAAGAAACAAAAATTGCAGATATCATAGTACACTTTCGCCTCAACGGTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCTTAGTAATGTACAACTGTGGGTTTACATAaaaa ]
[-] EMBL AU093952 [ TTTTTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAATTCGTTCAGTATATCTTCCTTGTATGGGCCGGAATCATGCAGGACCTTAATAACATGTTTAACCTGAGCCGTCTCATGTACAAGATAATTTCCTATAGCTGCCCCAAAACCAGGATCTAAGAAGTAGTGGCAGCTGTATGTTGTCACTGGGAGGTAACCACGCTGGATCTTGTGCTCTCCTTGAGCACCTGCCTCCACCTTACTCAGGTTCAGTTCTATAGCTGCTTCAATTGCCTGATAATAGCAAGCTTCAAAATGCAAATTGGGGAAATAAGCATCTGGCAGACAGCCCCATAAGCGGCCAAACAATGTGTCACCTCCAATAAGGGTAAGAGNCCCGGCAACATGGGTTATCGGCATGTTTCAGCAACAATTAAGCATCACCTTGTCACCCATCNTTTCTCCCA ]
[-] EMBL C98871 [ TTTTTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAA TCGTTCAGTATA CTTCCTTGTATGGGCCGGAATCATGCAGGACC TAATAACA GGTTAACCTGAGCCGTCTCATGTACAAGATAA TTCCNATAGCTGGCCCAAAACCAGGATCTAAGAAGTAGg ]
[-] EMBL C98870 [ TTTTTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAA TCG TCAGTATA CTNCC TGTATGGGGCGGAATCA GCAGGACC TAATAACAGGTTaa ]
[-] EMBL AK073492 [ ATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAATTCGTTCAGTATATCTTCCTTGTATGGGCCGGAATCATGCAGGACCTTAATAACATGTTTAACCTGAGCCGTCTCATGTACAAGATAATTTCCTATAGCTGCCCCAAAACCAGGATCTAAGAAGTAGTGGCAGCTGTATGTTGTCACTGGGAGGTAACCACGCTGGATCTTGTGCTCTCCTTGAGCACCTGCCTCCACCTTACTCAGGTTCAGTTCTATAGCTGCTTCAATTGCCTGATAATAGCAAGCTTCAAAATGCAAATTGGGGAAATAAGCATCTGGCAGACAGCCCCATAAGCGGCCAAACAATGTGTCACCTCCAATAAGGTTAAGAGCCCCGGCAACAT GTTTATCGTCATG TTCAGCAACAA TAAGCATCACCTTGTCACCCATCTTTTCTCCCAAGCGGTGAAAGAATTCCCTTGTCAAGTATGGTCTGCCCCAGTGATTAT CAGTTGT GTTG CGGTAGAACTTAT AAAAGGTGT CCC AATGCTCGCTCTTTATCT CATCT CCAC GAAGTCGCTT CATTTT C AAATTTT GAG CAGGAATCTTTTTACGTTCTTGTCT GATATTCTTCCGTTT GGGTTGCTT CAAATCC ATTAAAAACTC GT CAAAACTTCTGTAATCTCGATTTCT CCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTAGTATTCGAGTCCATAGCTATAGTAAGCTTCTGCCCATGATTGATCAAATACAAACTCTCCCCTTGAATGGCTTTTCAGGTAAAGTGGGACAACACCAACGACAGTTTCATTCTCATCCCGTGCAACAACATGCAGAGGTAACCACCCTGTTTCCTTCACTGCAGAACCCGATTCCTCTAAGCTTGAGAGGAATGCGTGGGTCAGAAAAGGATTAAAATTGTCAGGATCAACTGAATCAACCGCACAGGCATCCCAATCTGCTGAAGGAATGTCCATAATAGAAGAAACAACAGCAACAGAAACCTCACGTGGCTTGGTGTCTGCCTCTGAGGCTGACCCTGTAAGCGTATATGATTCAGCAGATGGGTTCAATTCACGTGTTCTTGTGTCTCCCTTAATCCACCCAAAAATTGCAGTAACCTTTAACTGCAATCCCGATCTTCGGAAGCCTAGATTCGAAGGCGAATGCCCGCGGCGGCGGCGAGGGTCCGGGCCGAAGAAGGAGGGGGAAGGGTGCCGCGTCGCCACCGCCGGCGAGGCCATCCCCACCTTGCCTCCGGTGAGAGGGAGAGAGAGAGGCTTGGGTGAGGATCGGAGACGAGCAGTGGGTGGTGTTGCGCAACCGACTGACACCT]
[-] EMBL AU091895 [ ctggaactgGATTNTCCAGTGGTGGTTGCCGGTAGGACTTATAAAAAGGTGTCCCC AATGCTCGCTCTTTATCT CATCTCCCAC GAAGTCGCTTCCATTTT CAAAATTTTGGAG CAGGAATCTTTTTACGTTCTTGTCTGGATATTCTTCCGTTT GGGTTGCTT CAAATCC ATT AAAACTC GT C AAACTTCTGTAATCTCGATTTCT CCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTAGTATTCGAGTCCATAGCT ]
[-] EMBL AU163620 [ CGGTAGGACTTATAAAAAGGTGC CCCNAATGCTCGCTCTTNATCTCCATCTCCCACGGAAGTCGCTTCCATTTTCC AAATTTTGGAGCCAGGAATCTTTTTACGTTCTTGTCTGGATATTCTCCCGTTTGGGGTTGCTTCCAAATCC ATTAAAAACTC GTCCAAAACTTCTGTAATCTCGATTTCTCCCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTAGTATTCGAGTCCATAGCT ]
[-] EMBL C72312 [ T GGG TGCTT CAAATCCNATTAAAAACTCGGT CAAAACTTCTGNAATCTCGATTTCT CCAGTGA ACTGCATCCCGATTNTCTGCAAGGACTAACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTNTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAANAGGCACACAANACTGCAACTTGGGGTAGTATTCGAGTCCATAGCT ]
consensusID : consensus_13447#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 339 fasta sequence
[CGTTTTTTTTTTTTTTTTTTAATCTGAAAGACTGAAACTCGGCTCAATTTCGTGCAGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGTAAAAAAAAAAAAAAAGTCTCTGCTAATCATACCACTTAAACCAACGCCATTACCGTCCATAATCGCCGCCGATGCCCTGCTGCTGCTGCAAGCCTGATGTGTGATTGGCTCATGGCTTCATTGGATGTTTGCAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGGTGAGGCAGAGAG]
[-] EMBL AU174811 [CGTTTTTTTTTTTTTTTTTTAATCTGAAAGACTGAAACTCGGCTCAATTTCGTGCAGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGTAAAAAAAAAAAAAAAGTCTCTGCTAATCATACCACTTAAACCAACGCCATTACCGTCCATAATCGCCGCCGATGCCCTGCTGCTGCTGCAAGCCTGATGTGTGATTGGCTCATGGCTTCATTGGATGTTTGCAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGGTGAG ]
[-] EMBL AU174810 [ TTTTTTTTAATCTGAAAGACTGAAACTCGGCTCAATTTCGTGCAGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGTAAAAAAAAAAAAAAAGTCTCTGCTAATCATACCACTTAAACCAACGCCATTACCGTCCATAATCGCCGCCGATGCCCTGCTGCTGCTGCAAGCCTGATGTGTGATTGGCTCATGGCTTCATTGGATGTTTGCAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGGTGAGGCAGAGAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13447#0 CTTCCTCTCCTCATCAGTCCTCACGGTCTCTCTCGCTCGCTCACGCAGTCTCTCACCACG 60
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 ACTCTCACGACCTCCCCCTGACCTGACCCAGAGGAGCAGGAGAGAGCATAGCACGGCCTG 120
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CACGGATCGAGCAGCGGCAGCAGGAGCTCGTCGCCTCTGCTTAAACCCCCCCCCCCCCCC 180
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 AATATCGGTCTCTCGCCTTGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACA 240
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGCTTCTCTCTCTCTT 300
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 TGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGA 360
consensus_13447#1 --------------------------------CGTTTTTTTTTTTTTTTTTTAATCTGAA 28
* * ** ** * * ** *
consensus_13447#0 AGGAGGAAGGGGGGTGACGAGGGTGCTGCTGGTGGACGAC-TCGCCGGTGGACAGGAGGG 419
consensus_13447#1 AGACTGAAACTCGGC--TCAATTTCGTGC-AGTAATCGCCGTCGACAGCGC-CAAGAAGG 84
** *** ** * * *** ** ** * *** * * * ** ** **
consensus_13447#0 TGGTGCAGCTCCTCCTCAGCAGCAGCGCATGC--GCCGGCTCATTCCACGTAATCGCCGT 477
consensus_13447#1 CCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGTAAAAAAAAAAAAAAAGTCTCTGC 144
** ** ***** * ** * * ** * * * * ** * *
consensus_13447#0 CGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGAGCAGGC 537
consensus_13447#1 TAATCATACCACTTAAACCAACGCCATTACCGTCCATAATC-----------------GC 187
* *** * *** * * ** ** ** **
consensus_13447#0 CATCGACATGGTGCTCACCGACTACTGCATGCCTGAGATG--ACTGGTTATGAGCTTC-T 594
consensus_13447#1 CGCCGATGCCCTGCT-----GCTGCTGCAAGCCTGATGTGTGATTGGCTCATGGCTTCAT 242
* *** **** ** ***** ****** ** * *** * ***** *
consensus_13447#0 CAAAGCCATCAAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGA 654
consensus_13447#1 TGGATGTTTGCAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGA 302
* * *************************************************
consensus_13447#0 AAACGAGCCCCAGAGGATCAGCAGATGCATGAATGCTGGTGCTGAAGATTTCATCGTAAA 714
consensus_13447#1 AAACGAGCCCCAGAGGATCAGCAGGTGAGGCAGAGAG----------------------- 339
************************ ** * *
consensus_13447#0 GCCTCTTCAAAGCAAGGACGTACAGCGTCTCAGGAACTGCTCGCCGGCGAACACGCAGTG 774
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CTGCGACGCCGGGAGCGACGGCAAGCCGCCGCTGCTGCTGCTGCCATCGGACCACGTCGT 834
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CGTCGACGCCACCGCCGCGTCGCCGCCGCCGCCGCCGTCCCGGCGTCGGGCGCACTTCGC 894
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 TGGAGTTGCCATGGTCCTGCACTCGTCGAGCGTCGAGCTGTCACATTACTTCCCTTTCCT 954
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CTTCAAGTTCATCCTGCTGGTGTACGCCATCCTGTGCCTGGGTGAGCTGCTGCACAGATG 1014
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GTCAAACGGCTGCTTCCTCAACCTGTGGTGTGCTTGACGAATGAAGCAACCGGTGCAGTC 1074
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CAAATGCAAAGGCAGGCTGCAACTGGCAAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCA 1134
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGA 1194
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 AGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTT 1254
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 TGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATG 1314
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 AGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCA 1374
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GAGAGCTTTTTCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTT 1434
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CAGATCCCATGAGAAAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTGATG 1494
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GGAAAAGAAACAAAAATTGCAGATATCATAGTACACTTTCGCCTCATTTTTTGTAAACTT 1554
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTC 1614
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 ACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGT 1674
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 ACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCAT 1734
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 ATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGAT 1794
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GTTCTACACTCCATCCCCTTGTGTAAGCAAAAATTCGTTCAGTATATCTTCCTTGTATGG 1854
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GCCGGAATCATGCAGGACCTTAATAACATGTTTAACCTGAGCCGTCTCATGTACAAGATA 1914
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 ATTTCCTATAGCTGCCCCAAAACCAGGATCTAAGAAGTAGTGGCAGCTGTATGTTGTCAC 1974
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 TGGGAGGTAACCACGCTGGATCTTGTGCTCTCCTTGAGCACCTGCCTCCACCTTACTCAG 2034
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GTTCAGTTCTATAGCTGCTTCAATTGCCTGATAATAGCAAGCTTCAAAATGCAAATTGGG 2094
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GAAATAAGCATCTGGCAGACAGCCCCATAAGCGGCCAAACAATGTGTCACCTCCAATAAG 2154
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GGTAAGAGNCCCGGCAACATGGTTATCGGCATGTTCAGCAACAATAAGCATCACCTTGTC 2214
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 ACCCATCNTTTCTCCCAAGCGGTGAAAGAATTCCCTTGTCAAGTATGGTCTGCCCCAGTG 2274
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 ATTATCAGTTGTGTTGCGGTAGGACTTATAAAAGGTGTCCCAATGCTCGCTCTTTATCTC 2334
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 ATCTCCACGAAGTCGCTTCATTTTCAAATTTTGAGCAGGAATCTTTTTACGTTCTTGTCT 2394
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GATATTCTTCCGTTTGGGTTGCTTCAAATCCATTAAAAACTCGTCAAAACTTCTGTAATC 2454
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 TCGATTTCTCCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTT 2514
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGT 2574
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCG 2634
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 AACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTA 2694
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GTATTCGAGTCCATAGCTATAGTAAGCTTCTGCCCATGATTGATCAAATACAAACTCTCC 2754
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CCTTGAATGGCTTTTCAGGTAAAGTGGGACAACACCAACGACAGTTTCATTCTCATCCCG 2814
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 TGCAACAACATGCAGAGGTAACCACCCTGTTTCCTTCACTGCAGAACCCGATTCCTCTAA 2874
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GCTTGAGAGGAATGCGTGGGTCAGAAAAGGATTAAAATTGTCAGGATCAACTGAATCAAC 2934
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CGCACAGGCATCCCAATCTGCTGAAGGAATGTCCATAATAGAAGAAACAACAGCAACAGA 2994
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 AACCTCACGTGGCTTGGTGTCTGCCTCTGAGGCTGACCCTGTAAGCGTATATGATTCAGC 3054
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 AGATGGGTTCAATTCACGTGTTCTTGTGTCTCCCTTAATCCACCCAAAAATTGCAGTAAC 3114
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CTTTAACTGCAATCCCGATCTTCGGAAGCCTAGATTCGAAGGCGAATGCCCGCGGCGGCG 3174
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 GCGAGGGTCCGGGCCGAAGAAGGAGGGGGAAGGGTGCCGCGTCGCCACCGCCGGCGAGGC 3234
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 CATCCCCACCTTGCCTCCGGTGAGAGGGAGAGAGAGAGGCTTGGGTGAGGATCGGAGACG 3294
consensus_13447#1 ------------------------------------------------------------
consensus_13447#0 AGCAGTGGGTGGTGTTGCGCAACCGACTGACACCT 3329
consensus_13447#1 -----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||