These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13447#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 3329 fasta sequence [CTTCCTCTCCTCATCAGTCCTCACGGTCTCTCTCGCTCGCTCACGCAGTCTCTCACCACGACTCTCACGACCTCCCCCTGACCTGACCCAGAGGAGCAGGAGAGAGCATAGCACGGCCTGCACGGATCGAGCAGCGGCAGCAGGAGCTCGTCGCCTCTGCTTAAACCCCCCCCC-CCCCCCAATATCGGTCTCTCGCCTTGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACAGCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGCTTCTCTCTCTCTTTGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGAAGGAGGAAGGGGGGTGACGAGGGTGCTGCTGGTGGACGACTCGCCGGTGGACAGGAGGGTGGTGCAGCTCCTCCTCAGCAGCAGCGCATGCGCCGGCTCATTCCACGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGAGCAGGCCATCGACATGGTGCTCACCGACTACTGCATGCCTGAGATGACTGGTTATGAGCTTCTCAAAGCCATCAAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGATGCATGAATGCTGGTGCTGAAGATTTCATCGTAAAGCCTCTTCAAAGCAAGGACGTACAGCGTCTCAGGAACTGCTCGCCGGCGAACACGCAGTGCTGCGACGCCGGGAGCGACGGCAAGCCGCCGCTGCTGCTGCTGCCATCGGACCACGTCGTCGTCGACGCCACCGCCGCGTCGCCGCCGCCGCCGCCGTCCCGGCGTCGGGCGCACTTCGCTGGAGTTGCCATGGTCCTGCACTCGTCGAGCGTCGAGCTGTCACATTACTTCCCTTTCCTCTTCAAGTTCATCCTGCTGGTGTACGCCATCCTGTGCCTGGGTGAGCTGCTGCACAGATGGTCAAACGGCTGCTT-CCTCAACC-TGTGGTGTGCTTGACGAATG-AAGCAACCGGTGCAGTCCAAATGC-AAAGGCAGGCTGCAACTGGC-AAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCACTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGAAGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTTTGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATGAGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCAGAGAGCTTTTTCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTTCAGATCCCATGAGAAAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTGATGGGAAAAGAAACAAAAATTGCAGATATCATAGTACACTTTCGCCTCATTTTTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAATTCGTTCAGTATATCTTCCTTGTATGGGCCGGAATCATGCAGGACCTTAATAACATGTTTAACCTGAGCCGTCTCATGTACAAGATAATTTCCTATAGCTGCCCCAAAACCAGGATCTAAGAAGTAGTGGCAGCTGTATGTTGTCACTGGGAGGTAACCACGCTGGATCTTGTGCTCTCCTTGAGCACCTGCCTCCACCTTACTCAGGTTCAGTTCTATAGCTGCTTCAATTGCCTGATAATAGCAAGCTTCAAAATGCAAATTGGGGAAATAAGCATCTGGCAGACAGCCCCATAAGCGGCCAAACAATGTGTCACCTCCAATAAGGGTAAGAGNCCCGGCAACAT-GGTTATCGGCATG-TTCAGCAACAA-TAAGCATCACCTTGTCACCCATCNTTTCTCCCAAGCGGTGAAAGAATTCCCTTGTCAAGTATGGTCTGCCCCAGTGATTAT-CAGTTGT-GTTG-CGGTAGGACTTAT-AAAAGGTGT-CCC-AATGCTCGCTCTTTATCT-CATCT-CCAC-GAAGTCGCTT-CATTTT-C-AAATTTT-GAG-CAGGAATCTTTTTACGTTCTTGTCT-GATATTCTTCCGTTT-GGGTTGCTT-CAAATCC-ATTAAAAACTC-GT-CAAAACTTCTGTAATCTCGATTTCT-CCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTAGTATTCGAGTCCATAGCTATAGTAAGCTTCTGCCCATGATTGATCAAATACAAACTCTCCCCTTGAATGGCTTTTCAGGTAAAGTGGGACAACACCAACGACAGTTTCATTCTCATCCCGTGCAACAACATGCAGAGGTAACCACCCTGTTTCCTTCACTGCAGAACCCGATTCCTCTAAGCTTGAGAGGAATGCGTGGGTCAGAAAAGGATTAAAATTGTCAGGATCAACTGAATCAACCGCACAGGCATCCCAATCTGCTGAAGGAATGTCCATAATAGAAGAAACAACAGCAACAGAAACCTCACGTGGCTTGGTGTCTGCCTCTGAGGCTGACCCTGTAAGCGTATATGATTCAGCAGATGGGTTCAATTCACGTGTTCTTGTGTCTCCCTTAATCCACCCAAAAATTGCAGTAACCTTTAACTGCAATCCCGATCTTCGGAAGCCTAGATTCGAAGGCGAATGCCCGCGGCGGCGGCGAGGGTCCGGGCCGAAGAAGGAGGGGGAAGGGTGCCGCGTCGCCACCGCCGGCGAGGCCATCCCCACCTTGCCTCCGGTGAGAGGGAGAGAGAGAGGCTTGGGTGAGGATCGGAGACGAGCAGTGGGTGGTGTTGCGCAACCGACTGACACCT] [+] EMBL AK072736 [CTTCCTCTCCTCATCAGTCCTCACGGTCTCTCTCGCTCGCTCACGCAGTCTCTCACCACGACTCTCACGACCTCCCCCTGACCTGACCCAGAGGAGCAGGAGAGAGCATAGCACGGCCTGCACGGATCGAGCAGCGGCAGCAGGAGCTCGTCGCCTCTGCTTAAACCCCCCCCC CCCCCCAATATCGGTCTCTCGCCTTGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACAGCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGCTTCTCTCTCTCTTTGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGAAGGAGGAAGGGGGGTGACGAGGGTGCTGCTGGTGGACGACTCGCCGGTGGACAGGAGGGTGGTGCAGCTCCTCCTCAGCAGCAGCGCATGCGCCGGCTCATTCCACGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGAGCAGGCCATCGACATGGTGCTCACCGACTACTGCATGCCTGAGATGACTGGTTATGAGCTTCTCAAAGCCATCAAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGATGCATGAATGCTGGTGCTGAAGATTTCATCGTAAAGCCTCTTCAAAGCAAGGACGTACAGCGTCTCAGGAACTGCTCGCCGGCGAACACGCAGTGCTGCGACGCCGGGAGCGACGGCAAGCCGCCGCTGCTGCTGCTGCCATCGGACCACGTCGTCGTCGACGCCACCGCCGCGTCGCCGCCGCCGCCGCCGTCCCGGCGTCGGGCGCACTTCGCTGGAGTTGCCATGGTCCTGCACTCGTCGAGCGTCGAGCTGTCACATTACTTCCCTTTCCTCTTCAAGTTCATCCTGCTGGTGTACGCCATCCTGTGCCTGGGTGAGCTGCTGCACAGATGGTCAAACGGCTGCTT CCTCAACC TGTGGTGTGCTTGACGAATG AAGCAACCGGTGCAGTCCAAATGC AAAGGCAGGCTGCAACTGGC AAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCACTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGAAGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTTTGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATGAGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCAGAGAGCTTTTTCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTTCAGATCCCATGAGAAAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTGATGGGAAAAGAAACAAAAATTGCAGATATCATAGTACACTTTCGCCTCAACGGTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCT ] [+] EMBL C72545 [ CACCACGACTCTCACGACCTCCCCCTGACCTGACCCAGAGGAGCAGGAGAGAGCATAGCACGGCCTGCACGGATCGAGCAGCGGCAG AGGAGCTCGTCGCCTCTGCTTAAACCCCCCCCCNNNCCCCAATATCGGTCTCTCGCCTTGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACAGCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGTTTCTCTCTCTCTTTGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGAAGGAGGAAGGGGGtna ] [+] EMBL AK105815 [ TGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACAGCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGCTTCTCTCTCTCTTTGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGAAGGAGGAAGGGGGGTGACGAGGGTGCTGCTGGTGGACGACTCGCCGGTGGACAGGAGGGTGGTGCAGCTCCTCCTCAGCAGCAGCGCATGCGCCGGCTCATTCCACGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGAGCAGGCCATCGACATGGTGCTCACCGACTACTGCATGCCTGAGATGACTGGTTATGAGCTTCTCAAAGCCATCAAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGATGCATGAATGCTGGTGCTGAAGATTTCATCGTAAAGCCTCTTCAAAGCAAGGACGTACAGCGTCTCAGGAACTGCTCGCCGGCGAACACGCAGTGCTGCGACGCCGGGAGCGACGGCAAGCCGCCGCTGCTGCTGCTGCCATCGGACCACGTCGTCGTCGACGCCACCGCCGCGTCGCCGCCGCCGCCGCCGTCCCGGCGTCGGGCGCACTTCGCTGGAGTTGCCATGGTCCTGCACTCGTCGAGCGTCGAGCTGTCACATTACTTCCCTTTCCTCTTCAAGTTCATCCTGCTGGTGTACGCCATCCTGTGCCTGGGTGAGCTGCTGCACAGATGGTCAAACGGCTGCTT CCTCAACC TGTGGTGTGCTTGACGAATG AAGCAACCGGTGCAGTCCAAATGC AAAGGCAGGCTGCAACTGGC AAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCACTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGAAGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTTTGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATGAGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCAGAGAGCTTTTTCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTTCAGATCCCATGAGAAAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTG ] [+] EMBL AU093996 [ gtcCAAACGGCTGCTTCCCTCANCCTTGTGGTGTNCTTGACGAATGAAAGCAACCGGTGCAGTCCAAATGCAAAAGGCAGGCTGCAACTGGCAAAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCACTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGAAGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTTTGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATGAGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCAGAGAGCTTTTNCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTTCAGATCCCATGAGNNAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTGATGGGAAAAGAAACAAAAATTGCAGATATCATAGTACACTTTCGCCTCAACGGTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCTTAGTAATGTACAACTGTGGGTTTACATAaaaa ] [-] EMBL AU093952 [ TTTTTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAATTCGTTCAGTATATCTTCCTTGTATGGGCCGGAATCATGCAGGACCTTAATAACATGTTTAACCTGAGCCGTCTCATGTACAAGATAATTTCCTATAGCTGCCCCAAAACCAGGATCTAAGAAGTAGTGGCAGCTGTATGTTGTCACTGGGAGGTAACCACGCTGGATCTTGTGCTCTCCTTGAGCACCTGCCTCCACCTTACTCAGGTTCAGTTCTATAGCTGCTTCAATTGCCTGATAATAGCAAGCTTCAAAATGCAAATTGGGGAAATAAGCATCTGGCAGACAGCCCCATAAGCGGCCAAACAATGTGTCACCTCCAATAAGGGTAAGAGNCCCGGCAACATGGGTTATCGGCATGTTTCAGCAACAATTAAGCATCACCTTGTCACCCATCNTTTCTCCCA ] [-] EMBL C98871 [ TTTTTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAA TCGTTCAGTATA CTTCCTTGTATGGGCCGGAATCATGCAGGACC TAATAACA GGTTAACCTGAGCCGTCTCATGTACAAGATAA TTCCNATAGCTGGCCCAAAACCAGGATCTAAGAAGTAGg ] [-] EMBL C98870 [ TTTTTTGTAAACTTGTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTCACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAA TCG TCAGTATA CTNCC TGTATGGGGCGGAATCA GCAGGACC TAATAACAGGTTaa ] [-] EMBL AK073492 [ ATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGTACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCATATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGATGTTCTACACTCCATCCCCTTGTGTAAGCAAAAATTCGTTCAGTATATCTTCCTTGTATGGGCCGGAATCATGCAGGACCTTAATAACATGTTTAACCTGAGCCGTCTCATGTACAAGATAATTTCCTATAGCTGCCCCAAAACCAGGATCTAAGAAGTAGTGGCAGCTGTATGTTGTCACTGGGAGGTAACCACGCTGGATCTTGTGCTCTCCTTGAGCACCTGCCTCCACCTTACTCAGGTTCAGTTCTATAGCTGCTTCAATTGCCTGATAATAGCAAGCTTCAAAATGCAAATTGGGGAAATAAGCATCTGGCAGACAGCCCCATAAGCGGCCAAACAATGTGTCACCTCCAATAAGGTTAAGAGCCCCGGCAACAT GTTTATCGTCATG TTCAGCAACAA TAAGCATCACCTTGTCACCCATCTTTTCTCCCAAGCGGTGAAAGAATTCCCTTGTCAAGTATGGTCTGCCCCAGTGATTAT CAGTTGT GTTG CGGTAGAACTTAT AAAAGGTGT CCC AATGCTCGCTCTTTATCT CATCT CCAC GAAGTCGCTT CATTTT C AAATTTT GAG CAGGAATCTTTTTACGTTCTTGTCT GATATTCTTCCGTTT GGGTTGCTT CAAATCC ATTAAAAACTC GT CAAAACTTCTGTAATCTCGATTTCT CCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTAGTATTCGAGTCCATAGCTATAGTAAGCTTCTGCCCATGATTGATCAAATACAAACTCTCCCCTTGAATGGCTTTTCAGGTAAAGTGGGACAACACCAACGACAGTTTCATTCTCATCCCGTGCAACAACATGCAGAGGTAACCACCCTGTTTCCTTCACTGCAGAACCCGATTCCTCTAAGCTTGAGAGGAATGCGTGGGTCAGAAAAGGATTAAAATTGTCAGGATCAACTGAATCAACCGCACAGGCATCCCAATCTGCTGAAGGAATGTCCATAATAGAAGAAACAACAGCAACAGAAACCTCACGTGGCTTGGTGTCTGCCTCTGAGGCTGACCCTGTAAGCGTATATGATTCAGCAGATGGGTTCAATTCACGTGTTCTTGTGTCTCCCTTAATCCACCCAAAAATTGCAGTAACCTTTAACTGCAATCCCGATCTTCGGAAGCCTAGATTCGAAGGCGAATGCCCGCGGCGGCGGCGAGGGTCCGGGCCGAAGAAGGAGGGGGAAGGGTGCCGCGTCGCCACCGCCGGCGAGGCCATCCCCACCTTGCCTCCGGTGAGAGGGAGAGAGAGAGGCTTGGGTGAGGATCGGAGACGAGCAGTGGGTGGTGTTGCGCAACCGACTGACACCT] [-] EMBL AU091895 [ ctggaactgGATTNTCCAGTGGTGGTTGCCGGTAGGACTTATAAAAAGGTGTCCCC AATGCTCGCTCTTTATCT CATCTCCCAC GAAGTCGCTTCCATTTT CAAAATTTTGGAG CAGGAATCTTTTTACGTTCTTGTCTGGATATTCTTCCGTTT GGGTTGCTT CAAATCC ATT AAAACTC GT C AAACTTCTGTAATCTCGATTTCT CCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTAGTATTCGAGTCCATAGCT ] [-] EMBL AU163620 [ CGGTAGGACTTATAAAAAGGTGC CCCNAATGCTCGCTCTTNATCTCCATCTCCCACGGAAGTCGCTTCCATTTTCC AAATTTTGGAGCCAGGAATCTTTTTACGTTCTTGTCTGGATATTCTCCCGTTTGGGGTTGCTTCCAAATCC ATTAAAAACTC GTCCAAAACTTCTGTAATCTCGATTTCTCCCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTAGTATTCGAGTCCATAGCT ] [-] EMBL C72312 [ T GGG TGCTT CAAATCCNATTAAAAACTCGGT CAAAACTTCTGNAATCTCGATTTCT CCAGTGA ACTGCATCCCGATTNTCTGCAAGGACTAACTATCCTTCAACTTGCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGTCAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTNTATCTCGAACTAATATTCTTTGACCAGTTACTGGAGTAANAGGCACACAANACTGCAACTTGGGGTAGTATTCGAGTCCATAGCT ] consensusID : consensus_13447#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 339 fasta sequence [CGTTTTTTTTTTTTTTTTTTAATCTGAAAGACTGAAACTCGGCTCAATTTCGTGCAGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGTAAAAAAAAAAAAAAAGTCTCTGCTAATCATACCACTTAAACCAACGCCATTACCGTCCATAATCGCCGCCGATGCCCTGCTGCTGCTGCAAGCCTGATGTGTGATTGGCTCATGGCTTCATTGGATGTTTGCAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGGTGAGGCAGAGAG] [-] EMBL AU174811 [CGTTTTTTTTTTTTTTTTTTAATCTGAAAGACTGAAACTCGGCTCAATTTCGTGCAGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGTAAAAAAAAAAAAAAAGTCTCTGCTAATCATACCACTTAAACCAACGCCATTACCGTCCATAATCGCCGCCGATGCCCTGCTGCTGCTGCAAGCCTGATGTGTGATTGGCTCATGGCTTCATTGGATGTTTGCAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGGTGAG ] [-] EMBL AU174810 [ TTTTTTTTAATCTGAAAGACTGAAACTCGGCTCAATTTCGTGCAGTAATCGCCGTCGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGTAAAAAAAAAAAAAAAGTCTCTGCTAATCATACCACTTAAACCAACGCCATTACCGTCCATAATCGCCGCCGATGCCCTGCTGCTGCTGCAAGCCTGATGTGTGATTGGCTCATGGCTTCATTGGATGTTTGCAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGAAAACGAGCCCCAGAGGATCAGCAGGTGAGGCAGAGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13447#0 CTTCCTCTCCTCATCAGTCCTCACGGTCTCTCTCGCTCGCTCACGCAGTCTCTCACCACG 60 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 ACTCTCACGACCTCCCCCTGACCTGACCCAGAGGAGCAGGAGAGAGCATAGCACGGCCTG 120 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CACGGATCGAGCAGCGGCAGCAGGAGCTCGTCGCCTCTGCTTAAACCCCCCCCCCCCCCC 180 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 AATATCGGTCTCTCGCCTTGTCACCTTACTTGCTTGGCTACTACTACTTCACCACGCACA 240 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GCTGGTTGGTTGGTTGGATTAGCTAGCTACTAGGATCAGTGCTTCGCTTCTCTCTCTCTT 300 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 TGCGTTGCCGTCGTCGTCGCCGCTGGTGGTGGTGGTGGTTGTTGGTGAGGGAGAGATGGA 360 consensus_13447#1 --------------------------------CGTTTTTTTTTTTTTTTTTTAATCTGAA 28 * * ** ** * * ** * consensus_13447#0 AGGAGGAAGGGGGGTGACGAGGGTGCTGCTGGTGGACGAC-TCGCCGGTGGACAGGAGGG 419 consensus_13447#1 AGACTGAAACTCGGC--TCAATTTCGTGC-AGTAATCGCCGTCGACAGCGC-CAAGAAGG 84 ** *** ** * * *** ** ** * *** * * * ** ** ** consensus_13447#0 TGGTGCAGCTCCTCCTCAGCAGCAGCGCATGC--GCCGGCTCATTCCACGTAATCGCCGT 477 consensus_13447#1 CCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGTAAAAAAAAAAAAAAAGTCTCTGC 144 ** ** ***** * ** * * ** * * * * ** * * consensus_13447#0 CGACAGCGCCAAGAAGGCCATGGAGTTCCTCGGCCTCAAGGAAGAAGGCAAGGAGCAGGC 537 consensus_13447#1 TAATCATACCACTTAAACCAACGCCATTACCGTCCATAATC-----------------GC 187 * *** * *** * * ** ** ** ** consensus_13447#0 CATCGACATGGTGCTCACCGACTACTGCATGCCTGAGATG--ACTGGTTATGAGCTTC-T 594 consensus_13447#1 CGCCGATGCCCTGCT-----GCTGCTGCAAGCCTGATGTGTGATTGGCTCATGGCTTCAT 242 * *** **** ** ***** ****** ** * *** * ***** * consensus_13447#0 CAAAGCCATCAAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGA 654 consensus_13447#1 TGGATGTTTGCAGGCGCTGAGCCCTCTGAAGCCGATCCCAGTGATCGTCATGTCGTCGGA 302 * * ************************************************* consensus_13447#0 AAACGAGCCCCAGAGGATCAGCAGATGCATGAATGCTGGTGCTGAAGATTTCATCGTAAA 714 consensus_13447#1 AAACGAGCCCCAGAGGATCAGCAGGTGAGGCAGAGAG----------------------- 339 ************************ ** * * consensus_13447#0 GCCTCTTCAAAGCAAGGACGTACAGCGTCTCAGGAACTGCTCGCCGGCGAACACGCAGTG 774 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CTGCGACGCCGGGAGCGACGGCAAGCCGCCGCTGCTGCTGCTGCCATCGGACCACGTCGT 834 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CGTCGACGCCACCGCCGCGTCGCCGCCGCCGCCGCCGTCCCGGCGTCGGGCGCACTTCGC 894 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 TGGAGTTGCCATGGTCCTGCACTCGTCGAGCGTCGAGCTGTCACATTACTTCCCTTTCCT 954 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CTTCAAGTTCATCCTGCTGGTGTACGCCATCCTGTGCCTGGGTGAGCTGCTGCACAGATG 1014 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GTCAAACGGCTGCTTCCTCAACCTGTGGTGTGCTTGACGAATGAAGCAACCGGTGCAGTC 1074 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CAAATGCAAAGGCAGGCTGCAACTGGCAAAGCTCTTTCTTGTTTGCGATAGCTTTCTGCA 1134 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CTGAAAGAGCAGCATGGAGAGGAGGTTAATGTTACAACAGATGATGATGATGATGATGGA 1194 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 AGTTTTAGGTAGATTGTTTGCTTTGAGATTCTAACCTGGAGCTTGGTTCTTCTTGGCCTT 1254 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 TGATTGATGAGAGGAGGGAGGAAGAACCAATCCTTGTATCCTTGTACAAAAAGCATAATG 1314 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 AGGCAGTATCTGATGTCCTTTTTGGTTGGGATCTTGGCTGATATGTCGATGTGACATTCA 1374 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GAGAGCTTTTTCCTTGCCCTTTCCTTTCGCCGATGGCAACTCCTCACCTGTATTGTAGTT 1434 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CAGATCCCATGAGAAAAGAACTACACAAGTTGACTAATGCAGCATCAGGTTCTTCTGATG 1494 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GGAAAAGAAACAAAAATTGCAGATATCATAGTACACTTTCGCCTCATTTTTTGTAAACTT 1554 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GTAATCCCATTCAGATAGGCGAAACTGGGCAATAGAATGTTGTTTTTTCTTTCAGTTGTC 1614 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 ACATTTCAAGCTAATGACTTGAGATTTTTAAATGACAGCTATTTACAAGCCTAGTAATGT 1674 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 ACAACTGTGGGTTTACATATTCACAGTATCATCTCCTTGTGGAGGCATGGGATCACCCAT 1734 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 ATTTTTGCTACTTCCACATCTTGAGTCATGAACATATTCATAGCTGTAAGTTCCTTTGAT 1794 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GTTCTACACTCCATCCCCTTGTGTAAGCAAAAATTCGTTCAGTATATCTTCCTTGTATGG 1854 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GCCGGAATCATGCAGGACCTTAATAACATGTTTAACCTGAGCCGTCTCATGTACAAGATA 1914 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 ATTTCCTATAGCTGCCCCAAAACCAGGATCTAAGAAGTAGTGGCAGCTGTATGTTGTCAC 1974 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 TGGGAGGTAACCACGCTGGATCTTGTGCTCTCCTTGAGCACCTGCCTCCACCTTACTCAG 2034 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GTTCAGTTCTATAGCTGCTTCAATTGCCTGATAATAGCAAGCTTCAAAATGCAAATTGGG 2094 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GAAATAAGCATCTGGCAGACAGCCCCATAAGCGGCCAAACAATGTGTCACCTCCAATAAG 2154 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GGTAAGAGNCCCGGCAACATGGTTATCGGCATGTTCAGCAACAATAAGCATCACCTTGTC 2214 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 ACCCATCNTTTCTCCCAAGCGGTGAAAGAATTCCCTTGTCAAGTATGGTCTGCCCCAGTG 2274 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 ATTATCAGTTGTGTTGCGGTAGGACTTATAAAAGGTGTCCCAATGCTCGCTCTTTATCTC 2334 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 ATCTCCACGAAGTCGCTTCATTTTCAAATTTTGAGCAGGAATCTTTTTACGTTCTTGTCT 2394 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GATATTCTTCCGTTTGGGTTGCTTCAAATCCATTAAAAACTCGTCAAAACTTCTGTAATC 2454 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 TCGATTTCTCCAGTGATACTGCATCCCGATTCTCTGCAAGAACTCACTATCCTTCAACTT 2514 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GCTGAATTCACCTTCAGATGGAAATGTTATATGTAACGATGACACCTTCAGCTTGGTAGT 2574 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CAAACTCTTCAATTCTTTCACTAAAGCTTCAAAAACTTGATCCCTGTATGGTGTATCTCG 2634 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 AACTAATATTCTTTGACCAGTTACTGGAGTAAAAGGCACACAAGACTGCAACTTGGGGTA 2694 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GTATTCGAGTCCATAGCTATAGTAAGCTTCTGCCCATGATTGATCAAATACAAACTCTCC 2754 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CCTTGAATGGCTTTTCAGGTAAAGTGGGACAACACCAACGACAGTTTCATTCTCATCCCG 2814 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 TGCAACAACATGCAGAGGTAACCACCCTGTTTCCTTCACTGCAGAACCCGATTCCTCTAA 2874 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GCTTGAGAGGAATGCGTGGGTCAGAAAAGGATTAAAATTGTCAGGATCAACTGAATCAAC 2934 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CGCACAGGCATCCCAATCTGCTGAAGGAATGTCCATAATAGAAGAAACAACAGCAACAGA 2994 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 AACCTCACGTGGCTTGGTGTCTGCCTCTGAGGCTGACCCTGTAAGCGTATATGATTCAGC 3054 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 AGATGGGTTCAATTCACGTGTTCTTGTGTCTCCCTTAATCCACCCAAAAATTGCAGTAAC 3114 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CTTTAACTGCAATCCCGATCTTCGGAAGCCTAGATTCGAAGGCGAATGCCCGCGGCGGCG 3174 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 GCGAGGGTCCGGGCCGAAGAAGGAGGGGGAAGGGTGCCGCGTCGCCACCGCCGGCGAGGC 3234 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 CATCCCCACCTTGCCTCCGGTGAGAGGGAGAGAGAGAGGCTTGGGTGAGGATCGGAGACG 3294 consensus_13447#1 ------------------------------------------------------------ consensus_13447#0 AGCAGTGGGTGGTGTTGCGCAACCGACTGACACCT 3329 consensus_13447#1 ----------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||