|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13454#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1967 fasta sequence
[AGCTCGCCCCCCACCACCCCCTCGCGCGCGGCCCCCACCCACCCCACCCTCGCAGACATCACCGCCGCCCACCGTTCCCATCGCCGCCGCCGTCCTCTCCCCCGCCCGCGCCTATATCATCTTCTCCCCCCCACCCTCGCGTACAGCAACGCATGCCCCCCCTCCTCCCCTCCCCTCCCGCTCGCCGCCATTGACCGAGCGATCTGCTGCCTCGCTCGCGAACTCCTACCCCGCCCGAGCCCGAGCCCAGGCCGTGGCCGCCGCGAGATCTCCGGCTGCTTTTCAGGTATGGTCGCCGCCTCCGGCCTCGCGCCGCCGCGGCTGGCGGTCTCCTGCCCGCGTGCAGGCGGGGCGCGGCTGAGGCGGACACCACCGGGTTGGCTTCCTCCGATCCGCTCCCGTGGCGTTGGCGGGGCCCGCGGCCGCGCAGCTCCGGTGCTGCGCCTCCACCGTCGACGACGGCGTCGTCTCCGCCGCGGCGGCCCCCAAGCCCCGCCTCCCCAGGGTCGTCGGTATGGGTTCAAAACTCATTGGATGCGGATCGGCCACTCCATCGCTTAGCGTTTCAAATGATGACCTTTCTAAAATAGTTGAAACATCAGATGAATGGATCGCAGCACGGACTGGGATTCGGAATAGGCGAGTTCTTTCAGGAAATGAGACACTGCGCGAGCTTTCAGTACAGGCAGCAAAAAAAGCTCTTGAGATGGCTCAAGTAAATGCTGATGATGTTGACCTTGTTCTCCTTTGCACGTCTACCCCAGATGATCTGTTTGGAGGTGCTGCTCAGGTGCTGGCGGAGGTGGGATGCGCAAATGCATTTGGCTTTGATATCACTGCTGCATGTAGTGGGTTTATTATTGGTTTAATTACGGCTACTCGTTTTATCAAAGGTGGAGGCATCC-GGAATATTCTAGTAATTGGTGCCGATGCTCTTTCACAATTTGT-GGATTGG-ACAGACAGAGGTACATGCATCCTCTTTGGT-GAT-GCTGCTGGT-GCTGTTTTGGTTCA-GGCATG-CAGTGCTGAT-GAAGATGGCTTGCTAGGTTTTTGCGTTCAAAGTGAT-GGCAACGGACAAAAGCACTTAAATTGTGTCTCGTCGCATGTT-GAGTCTAT-CCTG-TCG-AAGACC-AATGGTGTCCCTAGCTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT-CATTCCGCG-CGGTAAACATTTG-CAACAA-CCAAACA-CCGTTCCGAGATTTCATGTAC-GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC-CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA-CAGCTTGGCTGTCA-GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA-TGCGTAGAAATATTTAAATCCGGGA-TTGAACTTAGCTGG-CCTTGAGGGAATATTAATATTGTAAAGTTA-CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAAATTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAA-GCATGTAAGAAAGTGATGGATGTTTGTTGTAGGTCAATCATGAAAGAATG]
[+] EMBL AK120067 [AGCTCGCCCCCCACCACCCCCTCGCGCGCGGCCCCCACCCACCCCACCCTCGCAGACATCACCGCCGCCCACCGTTCCCATCGCCGCCGCCGTCCTCTCCCCCGCCCGCGCCTATATCATCTTCTCCCCCCCACCCTCGCGTACAGCAACGCATGCCCCCCCTCCTCCCCTCCCCTCCCGCTCGCCGCCATTGACCGAGCGATCTGCTGCCTCGCTCGCGAACTCCTACCCCGCCCGAGCCCGAGCCCAGGCCGTGGCCGCCGCGAGATCTCCGGCTGCTTTTCAGGTATGGTCGCCGCCTCCGGCCTCGCGCCGCCGCGGCTGGCGGTCTCCTGCCCGCGTGCAGGCGGGGCGCGGCTGAGGCGGACACCACCGGGTTGGCTTCCTCCGATCCGCTCCCGTGGCGTTGGCGGGGCCCGCGGCCGCGCAGCTCCGGTGCTGCGCCTCCACCGTCGACGACGGCGTCGTCTCCGCCGCGGCGGCCCCCAAGCCCCGCCTCCCCAGGGTCGTCGGTATGGGTTCAAAACTCATTGGATGCGGATCGGCCACTCCATCGCTTAGCGTTTCAAATGATGACCTTTCTAAAATAGTTGAAACATCAGATGAATGGATCGCAGCACGGACTGGGATTCGGAATAGGCGAGTTCTTTCAGGAAATGAGACACTGCGCGAGCTTTCAGTACAGGCAGCAAAAAAAGCTCTTGAGATGGCTCAAGTAAATGCTGATGATGTTGACCTTGTTCTCCTTTGCACGTCTACCCCAGATGATCTGTTTGGAGGTGCTGCTCAGGTGCTGGCGGAGGTGGGATGCGCAAATGCATTTGGCTTTGATATCACTGCTGCATGTAGTGGGTTTATTATTGGTTTAATTACGGCTACTCGTTTTATCAAAGGTGGAGGCATCC GGAATATTCTAGTAATTGGTGCCGATGCTCTTTCACAATTTGT GGATTGG ACAGACAGAGGTACATGCATCCTCTTTGGT GAT GCTGCTGGT GCTGTTTTGGTTCA GGCATG CAGTGCTGAT GAAGATGGCTTGCTAGGTTTATGCGTTCAAAGTGAT GGCAACGGACAAAAGCACTTAAATTGTGTCTCGTCGCATGTT GAGTCTAT CCTG TCG AAGACC AATGGTGTCCCTAGCTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAAATTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAA GCATGTAAGAAAGTGATGGATGTTT ]
[+] EMBL AA751713 [ gGCGCAAATGCATTTGGCTTTGATATCACTGCTGCATGTAGTGGGTTTATTATTGGTTTAATTACGGCTACTCGTTTTATCAAAGGTGGAGGCATCCGGGAATATTCTAGTAATTGGTGCCGATGCTCTTTCACAATTTGTGGGATTGGNACAGACAGAGGTACATGCATCCTCTTTGGTGGATGGCTGCTGGTGGCTGTTTTGGTTCAGGGCATGTCAGTGCTGATGGAAGATGGCTTGCTAGGTTTTTGCGTTCAAAGTGATGGGCAACGGACAAAAGCACTTAAATTGGGTCTCGTCGCATGTTGGAGTCTATCCCTGATCGAAANNCCAAATGG ]
[+] EMBL CF196810 [ CTAGGTTTTTGCGTTCAAAGTGAT GGCAACGGACAAAAGCACTTAAATTGTGTCTCGTCGCATGTT GAGTCTAT CCTG TCG AAGACC AATGGTGTCCCTAGCTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGNNNTCATGTAC GTGGCCNNNNNNTAAGTCTTnnnn ]
[+] EMBL BE040300 [ C AATGGTGTCCCTAGCTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTACAGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCG TACA CAGCTTGGCTGTCA GTGTGG AACAAGTCTGGATTG CCTACTAGCTCTTTGTAGTT AAGCGA TGCGTA AAATATTT AATCCCGGA TTGAACCTATCTGG CCTTGAGGGAATATT ATATTGTAAAGTAC CTGGGCCTT TTACAAGGGTGCG CCTG AAATTTTAATTG ACT TGGgt ]
[-] EMBL CB634848 [ TTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAATTTTTAATTGAACTGTGGTCAGCGTTCT ]
[-] EMBL CB622459 [ TGAATGGAAAGGAGGTTTTTCGCTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACCTGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAATTTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAA GCATGTAAGAAAGTGATGGATGTTTGTTGTAGGTCAATCATGAATGAATG]
[-] EMBL CB617791 [ CCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAT CATTCCGCG CGGTAAACATTTG CAACAA CCAAACA CCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTC CGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGTGCGCCCTGAAAATTTTTAATTGAACTGGGGTCAGCGTTCTGGCACTGATAATAA GCATGTAAGAAAGTGATGGATGTTTNTTGTAGGTCAATCTTTAAAGAAT ]
[+] EMBL BI799751 [ TTGGT CTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAATCCATTCCGCGCCGGTAAACATTTGCCAACAACCCAAACACCCGTTCCGAGATTTCATGTAC GTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTCGCGACATTGTTTTTTGGGTTAAATCTCCGTCATTTTGCTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACACCAGCTTGGCTGTCACGTGTGGTAACCAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGACTGCGTAGAAATATTTAAATCCGGGACTTGAACTTAGCTGGCCCTTGAGGGAATATTAATATTGTAAAGTTACCTGGGCCTTCTTAACAGGGTGCGCCCTGAAAATTTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAACGCATGTAAGAAAGTGATGGATGTTTGTTGTAGGTCAAaaaaaaaa ]
[+] EMBL AA750082 [ CTTGCACATGAAACAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACA CAGCTTGGCTGTCA GTGTGGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGA TGCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA C ]
[+] EMBL AU058099 [ GCTTGGCTGTCA GTGTGGTAACAAGNCTGGATTGTACTACTAGCNCTTTGTAGTTCAANCGA TNCGTAGAAATATTTAAATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA NTGGGCCTTCTTAACAGGGTGCGCCCTGAAAAATTTTAATTGAACTGTGGTCANCGTTCTGGCACTGATAAAAAaaaaaaaaa ]
[+] EMBL AA749662 [ CAAGCGA TGCGTAGAAATATTT AATCCGGGA TTGAACTTAGCTGG CCTTGAGGGAATATTAATATTGTAAAGTTA CTGGGCCTTCTTAACAGGGNNCGCCCTGAAAAATTTTAATTGAACTGTGGTCAGCGTTCTGGCACTGATAATAA GCATGTAAGAAAGTGATng ]
consensusID : consensus_13454#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 638 fasta sequence
[TTTACCTGCTTCCAGAATTGATTGGTGGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCAGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAACATTCCGCGCGGTAAACATTTGCAACAACCAAACACCGTTCAAAAAAATCAGGTACGTGGCCTAGGTAAAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTCCGACATGGGGGAGAGGGTCAAGAGCTCCCCCTGGAGGAGGGGGGAGGGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGCTCTCT]
[-] EMBL CB634847 [TTTACCTGCTTCCAGAATTGATTGGTGGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGCTGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAACACCAGTGCGGCCTCAATTCCATTAGCATTAGATGAGGCTGTTCGAGCTGGCAAGGTGAAGGCAGGCGATGTTATTGCAGCATCAGGTTTTGGTGCAGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAAACATTCCGCGCGGTAAACATTTGCAACAACCAAACACCGTTCAAAAAAATCAGGTACGTGGCCTAGGTAAAAGTCTTCCAGGGTCATTTGCCCTTTCCCTGTCCGACATGGGGGAGAGGGTCAAGAGCTCCCCCTGGAGGAGGGGGGAGGGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGCTCTCT]
consensusID : consensus_13454#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 336 fasta sequence
[GCTGCCGGGCCCTTCAAATGTCCCAAGTTAGCATTGTAGATGAGGCTGTTCGAGCTGGTCAAGCTGAAGGCAGCGATGTTATTGCAGCATCAGGTATTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAATCATCTCCGCCGCGGTAAACACTTTGCATACAACCAAACACCGCTTCCGAGATTTCATGTACGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCACTGTCCAGACATTGTTTTTTGGCGTTAAATCTCCGTCATTTTGGCTGGCACATGAAACAGTGGTGCGTCCTTATTCAATATAAAAAAA]
[+] EMBL BI799901 [GCTGCCGGGCCCTTCAAATGTCCCAAGTTAGCATTGTAGATGAGGCTGTTCGAGCTGGTCAAGCTGAAGGCAGCGATGTTATTGCAGCATCAGGTATTTGGTGCTGGACTTACATGGGGTTCAGCTATTGTCAAATGGTGCTAATCATCTCCGCCGCGGTAAACACTTTGCATACAACCAAACACCGCTTCCGAGATTTCATGTACGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTTCCACTGTCCAGACATTGTTTTTTGGCGTTAAATCTCCGTCATTTTGGCTGGCACATGAAACAGTGGTGCGTCCTTATTCAATATAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13454#0 AGCTCGCCCCCCACCACCCCCTCGCGCGCGGCCCCCACCCACCCCACCCTCGCAGACATC 60
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 ACCGCCGCCCACCGTTCCCATCGCCGCCGCCGTCCTCTCCCCCGCCCGCGCCTATATCAT 120
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 CTTCTCCCCCCCACCCTCGCGTACAGCAACGCATGCCCCCCCTCCTCCCCTCCCCTCCCG 180
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 CTCGCCGCCATTGACCGAGCGATCTGCTGCCTCGCTCGCGAACTCCTACCCCGCCCGAGC 240
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 CCGAGCCCAGGCCGTGGCCGCCGCGAGATCTCCGGCTGCTTTTCAGGTATGGTCGCCGCC 300
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 TCCGGCCTCGCGCCGCCGCGGCTGGCGGTCTCCTGCCCGCGTGCAGGCGGGGCGCGGCTG 360
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 AGGCGGACACCACCGGGTTGGCTTCCTCCGATCCGCTCCCGTGGCGTTGGCGGGGCCCGC 420
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 GGCCGCGCAGCTCCGGTGCTGCGCCTCCACCGTCGACGACGGCGTCGTCTCCGCCGCGGC 480
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 GGCCCCCAAGCCCCGCCTCCCCAGGGTCGTCGGTATGGGTTCAAAACTCATTGGATGCGG 540
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 ATCGGCCACTCCATCGCTTAGCGTTTCAAATGATGACCTTTCTAAAATAGTTGAAACATC 600
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 AGATGAATGGATCGCAGCACGGACTGGGATTCGGAATAGGCGAGTTCTTTCAGGAAATGA 660
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 GACACTGCGCGAGCTTTCAGTACAGGCAGCAAAAAAAGCTCTTGAGATGGCTCAAGTAAA 720
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 TGCTGATGATGTTGACCTTGTTCTCCTTTGCACGTCTACCCCAGATGATCTGTTTGGAGG 780
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 TGCTGCTCAGGTGCTGGCGGAGGTGGGATGCGCAAATGCATTTGGCTTTGATATCACTGC 840
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 TGCATGTAGTGGGTTTATTATTGGTTTAATTACGGCTACTCGTTTTATCAAAGGTGGAGG 900
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 CATCCGGAATATTCTAGTAATTGGTGCCGATGCTCTTTCACAATTTGTGGATTGGACAGA 960
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 CAGAGGTACATGCATCCTCTTTGGTGATGCTGCTGGTGCTGTTTTGGTTCAGGCATGCAG 1020
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 TGCTGATGAAGATGGCTTGCTAGGTTTTTGCGTTCAAAGTGATGGCAACGGACAAAAGCA 1080
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 CTTAAATTGTGTCTCGTCGCATGTTGAGTCTATCCTGTCGAAGACCAATGGTGTCCCTAG 1140
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 CTTCCCACCTAAAAAGGCAACCTTCTCCAACATTGAAATGAATGGAAAGGAGGTTTTTCG 1200
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------------
consensus_13454#0 CTTTGCTGTGCGATGTGTGCCACAATCTATTGAGAAGGCATTGGAAGAGGCTGGTTTACC 1260
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 ------------------------------------------------------TTTACC 6
consensus_13454#0 TGCTTCCAGTATTGATTGGTTGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGC 1320
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 TGCTTCCAGAATTGATTGGTGGTTGCTGCATCAAGCTAATCAGCGGATTATTGATGCTGC 66
consensus_13454#0 TGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAA 1380
consensus_13454#2 --------------------------------------------------GCTGCCGGGC 10
consensus_13454#1 TGCCAGTAGGTTGGATATCCCATCTGACAAAGTTATTTCAAATCTTGCTAATTACGGAAA 126
* * *
consensus_13454#0 CACCAGTGCGGCCTCAATTC-CATTAGCATTAGATGAGGCTGTTCGAGCTGG-CAAGGTG 1438
consensus_13454#2 CCTTCAAATGTCCCAAGTTAGCATTG----TAGATGAGGCTGTTCGAGCTGGTCAAGCTG 66
consensus_13454#1 CACCAGTGCGGCCTCAATTC-CATTAGCATTAGATGAGGCTGTTCGAGCTGG-CAAGGTG 184
* * ** * ** **** ********************** **** **
consensus_13454#0 AAGGCAGGCGATGTTATTGCAGCATCAGGT-TTTGGTGCTGGACTTACATGGGGTTCAGC 1497
consensus_13454#2 AAGGCAG-CGATGTTATTGCAGCATCAGGTATTTGGTGCTGGACTTACATGGGGTTCAGC 125
consensus_13454#1 AAGGCAGGCGATGTTATTGCAGCATCAGGT-TTTGGTGCAGGACTTACATGGGGTTCAGC 243
******* ********************** ******** ********************
consensus_13454#0 TATTGTCAAATGGTGCTAATCAT-TCCGC-GCGGTAAACA-TTTGCA-ACAACCAAACAC 1553
consensus_13454#2 TATTGTCAAATGGTGCTAATCATCTCCGCCGCGGTAAACACTTTGCATACAACCAAACAC 185
consensus_13454#1 TATTGTCAAATGGTGCTAAACAT-TCCGC-GCGGTAAACA-TTTGCA-ACAACCAAACAC 299
******************* *** ***** ********** ****** ************
consensus_13454#0 CG-TTCCGAGATTTCATGTACGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTT 1612
consensus_13454#2 CGCTTCCGAGATTTCATGTACGTGGCCTAGGTTTAAGTCTTCCAGGGTCATTTGCCCTTT 245
consensus_13454#1 CG-TTCAAAAAAATCAGGTACGTGGCCTAGGTAAAAGTCTTCCAGGGTCATTTGCCCTTT 358
** *** * * *** *************** **************************
consensus_13454#0 CC-CTGTCC-GACATTGTTTTTTGG-GTTAAATCTCCGTCATTTTG-CTTGCACATGAAA 1668
consensus_13454#2 CCACTGTCCAGACATTGTTTTTTGGCGTTAAATCTCCGTCATTTTGGCTGGCACATGAAA 305
consensus_13454#1 CC-CTGTCC-GACATGGGGGAGAGGGTCAAGAGCTCC----CCCTG--GAGGAGGGGGGA 410
** ****** ***** * ** * * **** ** * * * *
consensus_13454#0 CAGTGGTGCGTCCTTATTCATATATTCCTTTGGCTCGTTACACAGCTTGGCTGTCAGTGT 1728
consensus_13454#2 CAGTGGTGCGTCCTTATTCA-ATATAAAAAAA---------------------------- 336
consensus_13454#1 GGGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 470
* * * ** * * * *
consensus_13454#0 GGTAACAAGTCTGGATTGTACTACTAGCTCTTTGTAGTTCAAGCGATGCGTAGAAATATT 1788
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 530
consensus_13454#0 TAAATCCGGGATTGAACTTAGCTGGCCTTGAGGGAATATTAATATTGTAAAGTTACTGGG 1848
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 TCTCTCTCTCTCTCTCTCTCTCTCGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 590
consensus_13454#0 CCTTCTTAACAGGGTGCGCCCTGAAAAATTTTAATTGAACTGTGGTCAGCGTTCTGGCAC 1908
consensus_13454#2 ------------------------------------------------------------
consensus_13454#1 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGCTCTCT------------ 638
consensus_13454#0 TGATAATAAGCATGTAAGAAAGTGATGGATGTTTGTTGTAGGTCAATCATGAAAGAATG 1967
consensus_13454#2 -----------------------------------------------------------
consensus_13454#1 -----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||