These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2920 fasta sequence [TCGGACTCCTCGAACCTCGGGTTTCTTCTTCTCTTCTCGCCTCGCCTCCGTTTCGATTTGGGGAGAGAGAGATAGAGAGGCGATCGCATCGAGGAGGCGCAAAAACCCTAGAAGGCGAACCTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAA-TTCAACTGGTGGACCAATTGAGTTGAAAGCTGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTTGTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGCCGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAA-TATGTGCAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTT-CAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTACTTGGTGTGGATGTGCAGTACTTATTTCGCATTACATCATGATACACCCGTACGTATAGCAAACAACATCTTGAGAGTGTATATGTACCTGAAAATTTCTTCTTCCTGGCATGAATGAATAATCTAGTACTGCTCCTTGAAGAAGACGGCGTAGATGAGGCAGAAGACGCAGAAGATGATGATGCCGATGTCGATGGTGAGCGCGGTCATGGCCTGGTCGCTGAGGTCCATGTTGCGGCCGCCGAGGCGGTCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGGTCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGACGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGC-CGTCCTTCTTGGCGTTCCCGCCGACCCACCCTTCGTCCGGGTCCGACCAGTGTATCCTCGTGTCCACCGTCTTCTTCTTCCCCTGCGCCGCCGCCCCGGCCGCCGTAGCCGGGGACGGCTCCGTCTCCGGCGCGCCCCCCGCCGCCGCCGCGACGACGACGGCGACGAACGCCCTCCCGCTCCCGCGCCGGCCGTGGACGCTCGCTCGCCGCCGGTGGAGGAGCGGCGTGAACGGGGCGGATGCCGTGGACGCCGCCATGCGAGCGAGGCCGGAGTGTGCGTGCGTGCGCGCGCGCGGCGGCGCACGAGTCGAGTCGAGTGCTTTT] [+] EMBL C72480 [TCGGACTCCTCGAACCTCGGGTTTCTTCTTCTCTTCTCGCCTCGCCTCCGTTTCGATTTGGGGAGAGAGAGATAGAGAGGCGATCGCATCGAGGAGGCGCAAAAACCCTAGAAGGCGAACCTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGATACACTNGGTCCAGAAATTCAGG ] [+] EMBL AK101789 [ CCTCCGTTTCGATTTGGGGAGAGAGAGATAGAGAGGCGATCGCATCGAGGAGGCGCAAAAACCCTAGAAGGCGAACCTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAA TTCAACTGGTGGACCAATTGAGTTGAAAGCTGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTTGTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGCCGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAA TATGTGCAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTT CAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATT ] [+] EMBL C73119 [ CATCGAGGAGGCGCAAAAACCCTAGAAGGCGAACCTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGTCCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGATTGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGNCCTGTAATGCTGGATACACTGGGGCCAGAATTTAAGGGTCACAANTTAAATGGGGGGACC ATTGAGTTGAAAGTTGGGAATCAaggtancct ] [+] EMBL AK060466 [ TCACTGCTGGGATGGCAGTCGCACGGTTTGATTTCTCATGGGTGGATGCTTCATATCATCAGGAGACCCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGATACACTGGGTCCAGAAATTCAGGTTCACAA TTCAACTGGTGGACCAATTGAGTTGAAAGCTGGAAATCATGTCACCATAGCACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCCAATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCAATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTTGTGGAAACTTCTGGAGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTTGCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTCATTTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGCCGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGATATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGCTGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTGTTCATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCACTAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGTTGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAA TATGTGCAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTT CAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTACTTGGTGTGGATGTGCAGTACTT ] [+] EMBL OSC01721 [ CTTGGTGCGGAGACTCATCGAGGCCCTTATCCAGTTGATGCAGTNAGTACTGTTGGGAGAA TATGTGCAGAAGCTGAGTCTGTGTATAACCAGTTGGTTCACTT CAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGNCAGTGTTGGCCGTTGTCTTNCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAA ] [+] EMBL AU075390 [ GAATTATGTGNAAAACCTGAGTCTGTGTATAACCAGTTGGTTCACTTCCAAGAAATTAGTGAAGCATGTAGNTGATCCAATGCCCCATGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAATCGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAATGCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTACGGCACAACTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACAaaaa ] [+] EMBL AU172523 [ GGTGTCTACCCTTTGATGGCGAGTACTGAGGAGGCTGAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGCACAGAACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTAaaaaaaa ] [-] EMBL BI795077 [ TGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAA TTTGTGGACAAAATACAGGATACAGGGACATTTGGTTACTTGGTGTGGATGTGCAGTACTTATTTCGCATTACATCATGATACACCCGTACGTATAGCAAACAA ] [-] EMBL AK059179 [ TAATTTCATTCAAGAGCCTATTTACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTACTTGGTGTGGATGTGCAGTACTTATTTCGCATTACATCATGATACACCCGTACGTATAGCAAACAACATCTTGAGAGTGTATATGTACCTGAAAATTTCTTCTTCCTGGCATGAATGAATAATCTAGTACTGCTCCTTGAAGAAGACGGCGTAGATGAGGCAGAAGACGCAGAAGATGATGATGCCGATGTCGATGGTGAGCGCGGTCATGGCCTGGTCGCTGAGGTCCATGTTGCGGCCGCCGAGGCGGTCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGGTCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGACGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGC CGTCCTTCTTGGCGTTCCCGCCGACCCACCCTTCGTCCGGGTCCGACCAGTGTATCCTCGTGTCCACCGTCTTCTTCTTCCCCTGCGCCGCCGCCCCGGCCGCCGTAGCCGGGGACGGCTCCGTCTCCGGCGCGCCCCCCGCCGCCGCCGCGACGACGACGGCGACGAACGCCCTCCCGCTCCCGCGCCGGCCGTGGACGCTCGCTCGCCGCCGGTGGAGGAGCGGCGTGAACGGGGCGGATGCCGTGGACGCCGCCATGCGAGCGAGGCCGGAGTGTGCGTGCGTGCGCGCGCGCGGCGGCGCACGAGTCGAGTCGAGTGCTTTT] [-] EMBL BI798030 [ GTCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGGTCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGATGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGC CGCCGTCCTT ] [-] EMBL BI798671 [ TCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGGTCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGATGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGCGCGTCCTTCTTGGCGTTCCCGCCGA CCACCCTTCGTCCGGGTCCGACCAGTGTATCCTCGTGTCa ] [-] EMBL CF197071 [ CGGCCTCCTGCGCCAGCGTCCAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGGATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTGGACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAGAACTGGTAGTGAGACTCGGACGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGCTCCTTCTTCCGGCCGCCGC CGTCCTTCTTGGCGTTCCCGCCGACCCACCCTTCGTCCGGGTCCGACCAG ] consensusID : consensus_13461#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence [CTGAACCAACAAAGTGGCNTNCTACGGCAAAAACTCNGGCAAGNCAATGTTTGCTGCAAAAGTTGCCTACCCCTTGATGNCNAATACTGAGGAGGCCTGNAAACTGGTGGCCCCNCCAGGGAAAAGTACGGGATAAAACTTGCACAAGAAACTATGGTCGCNCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGANCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGNCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACANATTGCAACAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU082659 [CTGAACCAACAAAGTGGCNTNCTACGGCAAAAACTCNGGCAAGNCAATGTTTGCTGCAAAAGTTGCCTACCCCTTGATGNCNAATACTGAGGAGGCCTGNAAACTGGTGGCCCCNCCAGGGAAAAGTACGGGATAAAACTTGCACAAGAAACTATGGTCGCNCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTCCAGAAGANCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATTAGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGCTTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTGGCAATTTACCCATTTTAGGNCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATTTACANATTGCAACAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13461#0 TCGGACTCCTCGAACCTCGGGTTTCTTCTTCTCTTCTCGCCTCGCCTCCGTTTCGATTTG 60 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 GGGAGAGAGAGATAGAGAGGCGATCGCATCGAGGAGGCGCAAAAACCCTAGAAGGCGAAC 120 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 CTTCCGGAAGCTTCTGGAAGGGAGGATGCAGGGCGCCAACATGCTCCTGGACGAGCCCGT 180 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 CCGCCTCACCTCCGTCCTCACCCCCGTCAAGCCCAAAGTATTCCCATCACTCACCAAGAT 240 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TGTTGGGACCCTTGGGCCCAACTCACACTCCGTCGAGGTTATTCAAGAATGCCTCACTGC 300 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TGGGATGGCAGTCGCACGGTTTGATTTCTCATGGATGGATGCTTCATATCATCAGGAGAC 360 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 CCTTAACAATCTGAGGAAAGCTGCACAAAATGTCAATAAGCTGTGCCCTGTAATGCTGGA 420 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TACACTGGGTCCAGAAATTCAGGTTCACAATTCAACTGGTGGACCAATTGAGTTGAAAGC 480 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TGGAAATCATGTCACCATAACACCAGATCTTTCTAAAGCTCCCTCTTCTGAAATCTTGCC 540 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 AATTAAGTTTGGTGGTCTTGCAAAAGCTGTCAAGAAGGGTGATACTCTTTTTATTGGTCA 600 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 ATATCTCTTCACAGGAAGTGAAACAACATCTTCGTGGCTTGAGGTTGTGGAAACTTCTGG 660 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 AGAAAATGTTGAATGTCTTGTGACCAATACAGCTACACTTGCAGGCCCCATGTTCACTTT 720 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 GCATGTTTCAAAAGCCCATGTCAGTTTACCAACTTTGAGTGATTATGATAAAGAGGTCAT 780 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TTCAACTTGGGGATTACATAACAGTGTTGATATTATATCACTTTCCCATACCCGCTCTGC 840 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 CGAGGATGTCAGGGAGCTTAGATCTTTTCTTCAATCTCATGGCCTTCAGGACACACAGAT 900 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 ATATGCCAAGGTTGAAAATACTGAGGGTTTGGATCATTTTGATGAAATTCTCCAAGAAGC 960 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TGATGGCGTCATTATTTCACGGGGAGACCTGGGAATTGACCTTCCACCAGAAGATGTGTT 1020 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 CATATCCCAAAAAACAGCTATTAAGAAATGCAATCTTGCTGGCAAACCTGTGATCATCAC 1080 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TAGAGTTGTGGACAGCATGATTGACAATCTACGCCCAACACGTGCAGAGGCCACTGATGT 1140 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TGCAAATGCTGTCCTAGATGGAACGGATGGCATTTTGCTTGGTGCGGAGACTCATCGAGG 1200 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 CCCTTATCCAGTTGATGCAGTGAGTACTGTTGGGAGAATATGTGCAGAAGCTGAGTCTGT 1260 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 GTATAACCAGTTGGTTCACTTCAAGAAATTAGTGAAGCATGTAGGTGATCCAATGCCCCA 1320 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TGAAGAATCTGTGGCATCTTCAGCGGTTCGCACTGCAATGAAGGTAAAAGCTGCTGCAAT 1380 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 CGTTGTGTTCACTTTCTCAGGAAGAGCTGCCAGGTTAGTTGCCAAGTACAAGCCACCAAT 1440 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 GCCAGTGTTGGCCGTTGTCTTCCCACGTGAGGGCTCTGATCCAACAAAGTGGCGTTCTTA 1500 consensus_13461#1 -----------------------------------CTGAACCAACAAAGTGGCNTNCT-A 24 **** ************* * ** * consensus_13461#0 CGGCACAA-CTCAGGCAAGGCAATGTTTTGCTGCAAGAGGTGTCTACCCTTTGATGGCGA 1559 consensus_13461#1 CGGCAAAAACTCNGGCAAGNCAATGTTT-GCTGCAAAAGTTGCCTACCCCTTGATGNCNA 83 ***** ** *** ****** ******** ******* ** ** ****** ****** * * consensus_13461#0 GTACTGAGGAGGCT--GAAACTGGTGGGCTCACCAGGGAAGAGTACGGGATAAAACTTGC 1617 consensus_13461#1 ATACTGAGGAGGCCTGNAAACTGGTGGCCCCNCCAGGGAAAAGTACGGGATAAAACTTGC 143 ************ ********** * * ******** ******************* consensus_13461#0 ACAG--AACTATGGTCGCTCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTC 1675 consensus_13461#1 ACAAGAAACTATGGTCGCNCGGTTGGTATGCTAAAGCCCTATGACAGGTTGATCATTTTC 203 *** ************ ***************************************** consensus_13461#0 CAGAAGATCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATT 1735 consensus_13461#1 CAGAAGANCGGCGATTCATCTGTTGTCAAGATCATCGAGTGTGACAGTTCGTAAAAGATT 263 ******* **************************************************** consensus_13461#0 AGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGC 1795 consensus_13461#1 AGACACCTACCACATTCCGTCCAAGAGTTTCAACCACACAGAGGCGGATTACCTTTTTGC 323 ************************************************************ consensus_13461#0 TTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTG 1855 consensus_13461#1 TTTCTTTCTTGTTTGACATGATATTGAGACTAGAATAGGGAAGGCCAATTGTGCTGTTTG 383 ************************************************************ consensus_13461#0 GCAATTTACCCATTTTAGGTCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATT 1915 consensus_13461#1 GCAATTTACCCATTTTAGGNCCATACTTGCTTTTTCAATAATTTCATTCAAGAGCCTATT 443 ******************* **************************************** consensus_13461#0 TACACATTGCAACAATCCAATTTTGTGGACAAAATACAGGATACAGGGACATTTGGTTAC 1975 consensus_13461#1 TACANATTGCAACAAAAAAAAAAAAAAAAAAAAAAAAA---------------------- 481 **** ********** ** * **** * * consensus_13461#0 TTGGTGTGGATGTGCAGTACTTATTTCGCATTACATCATGATACACCCGTACGTATAGCA 2035 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 AACAACATCTTGAGAGTGTATATGTACCTGAAAATTTCTTCTTCCTGGCATGAATGAATA 2095 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 ATCTAGTACTGCTCCTTGAAGAAGACGGCGTAGATGAGGCAGAAGACGCAGAAGATGATG 2155 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 ATGCCGATGTCGATGGTGAGCGCGGTCATGGCCTGGTCGCTGAGGTCCATGTTGCGGCCG 2215 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 CCGAGGCGGTCGACCATGTCGGGGACGGACTGGTAGCTGTCGAGGTCCTGCTGGTAGGGG 2275 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TCCTCGAGCCTGGACCGCAGCTGCTGGAGGCGCCGGCTCTCGGCCTCCTGCGCCAGCGTC 2335 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 CAGTCGTAGAACCGCCGCGACTCCTCCCGGCTCAGCACGTTGTACGCCTCCCGCAGCCGG 2395 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 ATGAACCGCTCCGACGCCTCCCGCAGCGGCAGCGACGTCGTGTCCGGGTGGTACTCCTTG 2455 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 GACAGCCGCCGGTACGCCGCCTTTATCTCCTCGATGTCCGCCTTCGGTTCCACCCCCAAG 2515 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 AACTGGTAGTGAGACTCGGACGGGTTGTTGATGAGGTCGGCGAACCTCCCACCGAGCGGC 2575 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TCCTTCTTCCGGCCGCCGCCGTCCTTCTTGGCGTTCCCGCCGACCCACCCTTCGTCCGGG 2635 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TCCGACCAGTGTATCCTCGTGTCCACCGTCTTCTTCTTCCCCTGCGCCGCCGCCCCGGCC 2695 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 GCCGTAGCCGGGGACGGCTCCGTCTCCGGCGCGCCCCCCGCCGCCGCCGCGACGACGACG 2755 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 GCGACGAACGCCCTCCCGCTCCCGCGCCGGCCGTGGACGCTCGCTCGCCGCCGGTGGAGG 2815 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 AGCGGCGTGAACGGGGCGGATGCCGTGGACGCCGCCATGCGAGCGAGGCCGGAGTGTGCG 2875 consensus_13461#1 ------------------------------------------------------------ consensus_13461#0 TGCGTGCGCGCGCGCGGCGGCGCACGAGTCGAGTCGAGTGCTTTT 2920 consensus_13461#1 --------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||