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Oryza sativa
cluster # 13468 cluster # 13468       Sequences # 13       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13468#0 length = 2307 sequences # 7  
consensus_13468#1 length = 688 sequences # 1  
consensus_13468#2 length = 679 sequences # 2  
consensus_13468#3 length = 518 sequences # 1  
consensus_13468#4 length = 488 sequences # 1  
consensus_13468#5 length = 402 sequences # 1  

consensusID : consensus_13468#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2307
fasta sequence
                              [GCTACCTCTCTCTCTCTCGACTCCCGAGCAGGCGACTCCTCCCTCCCCGGCGATTCCGCCGCTCCGACCGCCGTCTCTCCGCGCCGCGCACGTGAGCCCCCCGTCGCCTTCCTCGCACGGACTCTGCCCCCGCCGGAATCTCATCTCCTACGCCTCAAACCCCCACCCCGCGACGCCGCCTAGCCGCGATTTTCCTGCGGGGTACTCCACCGCCCCTGGAGGCTGGAGCCGTGCTCTCCGGATCGGCGTTGGATTGGTAGCGCTCGCGTCCTGCTCTGTCGGGCGGCGATATGAAGCCCCCTGCATCCTCCGCCGCCGCTGCCGGCGACAAGGGCGGCGGGGTCGACCCGTCTCTGCCGCGGTTCAAGTGCCAGGAGTGCCAACGCGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCGATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTATGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGC-TTCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGAGGTTGCTGTCTGATAAAATGGAGAAGGAAATTGAAGATGTTAATACTGACAATAAAGCTTATGAGGCCTGTCTTCAACGTCTGGAGCAGGAAACCTATAACATCCTCAGTGAAACTGACTTTCAGAAGGAGAGACAAAAGATTGAGGAAGAAGAAAAGAAACTTAAAGCTGCAATTGAGGAAGCTGAAAAGCAATATTCAGAAATTTGTTCCGAGATGAAGTGCCTTGAAACAAAATCTAAACAGTTCGAAGAACTGGAAGAAAGGTATTGCCATGATCTCAATAGCTTTCAGTTTCAGTGGATATCTCACCAGGAAGAAAGAGATGCGGTTTTGGCCAAGATAGAAGTTTCGCAGGTTCATCTAGAATTGTTAAAGCGTACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGGGTGATCGGAACAATAAACAACTTTCGTCTTGGCCGCCTTCCTAATGTACAGGTGGAGTGGGATGAGATAAATGCTGCTTGGGGCCAGGCTGCTCTTCTGTTGCATACCATGGCTCAGTACTTCTTCCCAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTTGCCCCACCCTCTGGATCTTTACACGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCTTGTGATGCTGATTATAAGCGCATATTGGCAAATGGCATT-GAC-TAGGCTCGTTTGTAA-TTTACAGTAGTACATACAGCTAG-TTTTTTTTTT-CCTTTTGGCCGCCTT-CAGTTGTACTTCCTCCGTTTCACAATGTAAGTCATCATAG-CATTTCCCATATTTATAATGATGTTAATGAATCTAT-ATAGATATATATGT-CTAGATTTATT-AACGTCAATATGAATATAGGAAATGCTAGAATGACTTACATTGTGAAACGGGGGGAGTATATATGGTTGAAATCTGCACAGGAAAAATTGCAGATGATGGTGCAACTCAGCTTATAGTCGGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAATGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTCTGGTTAGGTGAGTTTGTGATGGTGCAATCAACAGCATATCCAATCAACATTAAGATTTATAAGAGATGAAATGTCTTCAGCAACAAAAA]

[+] EMBL AK099664             [GCTACCTCTCTCTCTCTCGACTCCCGAGCAGGCGACTCCTCCCTCCCCGGCGATTCCGCCGCTCCGACCGCCGTCTCTCCGCGCCGCGCACGTGAGCCCCCCGTCGCCTTCCTCGCACGGACTCTGCCCCCGCCGGAATCTCATCTCCTACGCCTCAAACCCCCACCCCGCGACGCCGCCTAGCCGCGATTTTCCTGCGGGGTACTCCACCGCCCCTGGAGGCTGGAGCCGTGCTCTCCGGATCGGCGTTGGATTGGTAGCGCTCGCGTCCTGCTCTGTCGGGCGGCGATATGAAGCCCCCTGCATCCTCCGCCGCCGCTGCCGGCGACAAGGGCGGCGGGGTCGACCCGTCTCTGCCGCGGTTCAAGTGCCAGGAGTGCCAACGCGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCGATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTATGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGC TTCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGAGGTTGCTGTCTGATAAAATGGAGAAGGAAATTGAAGATGTTAATACTGACAATAAAGCTTATGAGGCCTGTCTTCAACGTCTGGAGCAGGAAACCTATAACATCCTCAGTGAAACTGACTTTCAGAAGGAGAGACAAAAGATTGAGGAAGAAGAAAAGAAACTTAAAGCTGCAATTGAGGAAGCTGAAAAGCAATATTCAGAAATTTGTTCCGAGATGAAGTGCCTTGAAACAAAATCTAAACAGTTCGAAGAACTGGAAGAAAGGTATTGCCATGATCTCAATAGCTTTCAGTTTCAGTGGATATCTCACCAGGAAGAAAGAGATGCGGTTTTGGCCAAGATAGAAGTTTCGCAGGTTCATCTAGAATTGTTAAAGCGTACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGGGTGATCGGAACAATAAACAACTTTCGTCTTGGCCGCCTTCCTAATGTACAGGTGGAGTGGGATGAGATAAATGCTGCTTGGGGCCAGGCTGCTCTTCTGTTGCATACCATGGCTCAGTACTTCTTCCCAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTTGCCCCACCCTCTGGATCTTTACACGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCTTGTGATGCTGATTATAAGCGCATATTGGCAAATGGCATT GAC TAGGCTCGTTTGTAA TTTACAGTAGTACATACAGCTAG TTTTTTTTTT CCTTTTGGCCGCCTT CAGTTGTACTTCCTCCGTTTCACAATGTAAGTCATCATAG CATTTCCCATATTTATAATGATGTTAATGAATCTAT ATAGATATATATGT CTAGATTTATT AACGTCAATATGAATATAGGAAATGCTAGAATGACTTACATTGTGAAACGGGGGGAGTATATATGGTTGAAATCTGCACAGGAAAAATTGCAGATGATGGTGCAACTCAGCTTATAGTCGGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAATGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTCTGGTTAGGTGAGTTTGTGATGGTGCAATCAACAGCATATCCAATCAACATTAAGATTTATAAGAGATGAAA                  ]
[+] EMBL AK066359             [GCTACCTCTCTCTCTCTCGACTCCCGAGCAGGCGACTCCTCCCTCCCCGGCGATTCCGCCGCTCCGACCGCCGTCTCTCCGCGCCGCGCACGTGAGCCCCCCGTCGCCTTCCTCGCACGGACTCTGCCCCCGCCGGAATCTCATCTCCTACGCCTCAAACCCCCACCCCGCGACGCCGCCTAGCCGCGATTTTCCTGCGGGGTACTCCACCGCCCCTGGAGGCTGGAGCCGTGCTCTCCGGATCGGCGTTGGATTGGTAGCGCTCGCGTCCTGCTCTGTCGGGCGGCGATATGAAGCCCCCTGCATCCTCCGCCGCCGCTGCCGGCGACAAGGGCGGCGGGGTCGACCCGTCTCTGCCGCGGTTCAAGTGCCAGGAGTGCCAACGCGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCGATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTATGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGC TTCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGAGGTTGCTGTCTGATAAAATGGAGAAGGAAATTGAAGATGTTAATACTGACAATAAAGCTTATGAGGCCTGTCTTCAACGTCTGGAGCAGGAAACCTATAACATCCTCAGTGAAACTGACTTTCAGAAGGAGAGACAAAAGATTGAGGAAGAAGAAAAGAAACTTAAAGCTGCAATTGAGGAAGCTGAAAAGCAATATTCAGAAATTTGTTCCGAGATGAAGTGCCTTGAAACAAAATCTAAACAGTTCGAAGAACTGGAAGAAAGGTATTGCCATGATCTCAATAGCTTTCAGTTTCAGTGGATATCTCACCAGGAAGAAAGAGATGCGGTTTTGGCCAAGATAGAAGTTTCGCAGGTTCATCTAGAATTGTTAAAGCGTACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGGGTGATCGGAACAATAAACAACTTTCGTCTTGGCCGCCTTCCTAATGTACAGGTGGAGTGGGATGAGATAAATGCTGCTTGGGGCCAGGCTGCTCTTCTGTTGCATACCATGGCTCAGTACTTCTTCCCAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTTGCCCCACCCTCTGGATCTTTACACGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCTTGTGATGCTGATTATAAGCGCATATTGGCAAATGGCATT GAC TAGGCTCGTTTGTAA TTTACAGTAGTACATACAGCTAG TTTTTTTTTT CCTTTTGGCCGCCTT CAGTTGTACTTCCTCCGTTTCACAATGTAAGTCATCATAG CATTTCCCATATTTATAATGATGTTAATGAATCTAT ATAGATATATATGT CTAGATTTATT AACGTCAATATGAATATAGGAAATGCTAGAATGACTTACATTGTGAAACGGGGGGAGTATATATGGTTGAAATCTGCACAGGAAAAATTGCAGATGATGGTGCAACTCAGCTTATAGTCGGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAATGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTCTGGTTAGGTGAGTTTGTGATGGTGCAATCAACAGCATATCCAATCAACATTAAGATTTATAAGAGATGAAA                  ]
[+] EMBL C28120               [                                                                                                                                                                                                                                                                                                                                                                TCTGCCGCGGTTCAAGTGCCAGGAGTGCCAACGNGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCGATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTATGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGNCCGNCAAGNGCAGGGATCCCGNGTGNCGAGCCGAACCANCCAACAAGAGCAATGGAGGGATCATATATAGTGCTTTCCACCTGCTGCCGnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF329536             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ctGAAGGAGTAGAAACGGTTTTGGCCAAGATAGAAGTTTCGCAGGTTCATCTAGAATTGTTAAAGCGTACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGGGTGATCGGAACAATAAACAACTTTCGTCTTGGCCGCCTTCCTAATGTACAGGTGGAGTGGGATGAGATAAATGCTGCTTGGGGCCAGGCTGCTCTTCTGTTGCATACCATGGCTCAGTACTTCTTCCCAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF316531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                gagtagAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTTGCCCCACCCTCTGGATCTTTACACGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCTTGTGATGCTGATTATAAGCGCATATTGGCAAATGGCATT GAC TAGGCTCGTTTGTAA TTTACAGTAGTACATACAGCTAG TTTTTTTTTT CCTTTTGGCC                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF329537             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAAGTCACTGGCTTGTGATGCTGATTATAAGCGCATATTGGCAAATGGCATT GAC TAGGCTCGTTTGTAA TTTACAGTAGTACATACAGCTAGTTTTTTTTTTT CCTTTTGGCCGCCTT CAGTTGTACTTCCTCCGTTTCACAATGTAAGTCATCATAG CATTTCCCATATTTATAATGATGTTAATGAATCTAT ATAGATATATATGT CTAGATTTATT AACGTCAATATGAATATAGGAAATGCTAGAATGACTTACATTGTGAAACGGGGGGAGTATATATGGTTGAAATCTGCACAGGAGAAATTGCAGATGATGGTGCAACTCAGCTTATAGTCGGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAATGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTCTGGTTAGGTGAGTTTGTGATGGTGCAATCAACAGCATATCCAATCAACATTAAGATTTATAAGAAAAAAAA                  ]
[+] EMBL C97378               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGTCACTGNCTTGTGATGCTGATTATAAGCGCNTATTGGCAAATGGCATTGGACTTAGGCTCGTTTGTAATTTTACAGTAGTACATACAGCTAG TTTTTTTTTTNCCTTTTGGCCGCCTTCCAGTTGTACTTCCTCCGTTTCACAATGTAAGTCATCATAGCCATTTCCCATATTTATAATGATGTTAATGAATCTATCATAGATATATATGTCCTAGATTTATTNAACGTCAATATGAATATAGGAAATGCTAGAATGACTTACATTGTGAAACGGGGGGAGTATATATGGTTGAAATCTGCACAGGAGAAATTGCAGATGATGGTGCAACTCAGCTTATAGTCGGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAATGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTCTGGTTAGGTGAGTTTGTGATGGTGCAATCAACAGCATATCCAATCAACATTAAGATTTATAAGAGATGAAATGTCTTCAGCAACAAAAA]


>consensus_13468#0 GCTACCTCTCTCTCTCTCGACTCCCGAGCAGGCGACTCCTCCCTCCCCGGCGATTCCGCC GCTCCGACCGCCGTCTCTCCGCGCCGCGCACGTGAGCCCCCCGTCGCCTTCCTCGCACGG ACTCTGCCCCCGCCGGAATCTCATCTCCTACGCCTCAAACCCCCACCCCGCGACGCCGCC TAGCCGCGATTTTCCTGCGGGGTACTCCACCGCCCCTGGAGGCTGGAGCCGTGCTCTCCG GATCGGCGTTGGATTGGTAGCGCTCGCGTCCTGCTCTGTCGGGCGGCGATATGAAGCCCC CTGCATCCTCCGCCGCCGCTGCCGGCGACAAGGGCGGCGGGGTCGACCCGTCTCTGCCGC GGTTCAAGTGCCAGGAGTGCCAACGCGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCG ATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTA TGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAATAGATCACATA GCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAAC CAACAAGAGCAATGGAGGGATCATATATAGTGCTTCCACCTGCTGCCGCTTCCATATACA AGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTA GCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGA TTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGAGGTTGCTGT CTGATAAAATGGAGAAGGAAATTGAAGATGTTAATACTGACAATAAAGCTTATGAGGCCT GTCTTCAACGTCTGGAGCAGGAAACCTATAACATCCTCAGTGAAACTGACTTTCAGAAGG AGAGACAAAAGATTGAGGAAGAAGAAAAGAAACTTAAAGCTGCAATTGAGGAAGCTGAAA AGCAATATTCAGAAATTTGTTCCGAGATGAAGTGCCTTGAAACAAAATCTAAACAGTTCG AAGAACTGGAAGAAAGGTATTGCCATGATCTCAATAGCTTTCAGTTTCAGTGGATATCTC ACCAGGAAGAAAGAGATGCGGTTTTGGCCAAGATAGAAGTTTCGCAGGTTCATCTAGAAT TGTTAAAGCGTACAAATGTTCTCAATGATGCATTCTATATTTCACATGATGGGGTGATCG GAACAATAAACAACTTTCGTCTTGGCCGCCTTCCTAATGTACAGGTGGAGTGGGATGAGA TAAATGCTGCTTGGGGCCAGGCTGCTCTTCTGTTGCATACCATGGCTCAGTACTTCTTCC CAAAATTTGAATACCGGATCAAAATTCACCCTATGGGAAGCTATCCAAAAGTTACAGACA TCAACCAAAATACATATGAACTGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTG ACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTT TGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAG GTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAA AAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATA CAAGTTTTGCCCCACCCTCTGGATCTTTACACGTAGCACAGTCTTCCAAGGGATGAAGTC ACTGGCTTGTGATGCTGATTATAAGCGCATATTGGCAAATGGCATTGACTAGGCTCGTTT GTAATTTACAGTAGTACATACAGCTAGTTTTTTTTTTCCTTTTGGCCGCCTTCAGTTGTA CTTCCTCCGTTTCACAATGTAAGTCATCATAGCATTTCCCATATTTATAATGATGTTAAT GAATCTATATAGATATATATGTCTAGATTTATTAACGTCAATATGAATATAGGAAATGCT AGAATGACTTACATTGTGAAACGGGGGGAGTATATATGGTTGAAATCTGCACAGGAAAAA TTGCAGATGATGGTGCAACTCAGCTTATAGTCGGCTTGATCATTATTCATGTAATTATTT AGCCATGTGTGACAGAAAATGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTCTG GTTAGGTGAGTTTGTGATGGTGCAATCAACAGCATATCCAATCAACATTAAGATTTATAA GAGATGAAATGTCTTCAGCAACAAAAA



consensusID : consensus_13468#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 688
fasta sequence
                              [GAAGCTATCCAAGGGTTTCAGCCTCCACCCAAAATACATATGAACTGTTCGGTCCTGTGAATTTTTCTGGAGTACCCGATTTGGCAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATCCAATCTTTTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCCCTAAAATACCTGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTCGCCCCCCCCTCTGGATCTTTACATGTAGCCCAGTCTTCCAAGGGATGAAGTCCCTGGCCTGTGATGCTGATTATAACCGCATATTGGCAAATGGCATTGACTAGGCTCGTTTGTAATGTACAGAAGTAGTACATACAGCTAGTTTTTTTTTTCCCTTTTGGCCGCCTTCAGTGGTATATATGATTGAAATCTGCCCAAGAGAAATTGCAAATGATGGTGCAACTCAGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAAAGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTATGGTTTGGTGAGTTTGTGATGGTGCAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA759680             [GAAGCTATCCAAGGGTTTCAGCCTCCACCCAAAATACATATGAACTGTTCGGTCCTGTGAATTTTTCTGGAGTACCCGATTTGGCAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATCCAATCTTTTTAAGTTTCAATAAACTTGACAATTGGACAAAAGCCCTAAAATACCTGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTCGCCCCCCCCTCTGGATCTTTACATGTAGCCCAGTCTTCCAAGGGATGAAGTCCCTGGCCTGTGATGCTGATTATAACCGCATATTGGCAAATGGCATTGACTAGGCTCGTTTGTAATGTACAGAAGTAGTACATACAGCTAGTTTTTTTTTTCCCTTTTGGCCGCCTTCAGTGGTATATATGATTGAAATCTGCCCAAGAGAAATTGCAAATGATGGTGCAACTCAGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAAAGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTATGGTTTGGTGAGTTTGTGATGGTGCAAAAAAAAAAAAAAAAAAAAA]


>consensus_13468#1 GAAGCTATCCAAGGGTTTCAGCCTCCACCCAAAATACATATGAACTGTTCGGTCCTGTGA ATTTTTCTGGAGTACCCGATTTGGCAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGA ATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGACAAGTCATT GAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATCCAATCTTTTTAAGTTT CAATAAACTTGACAATTGGACAAAAGCCCTAAAATACCTGCTGTGCAACTTGAAGTGGGT TCTCTACTGGTTTATCGGCAATACAAGTTTCGCCCCCCCCTCTGGATCTTTACATGTAGC CCAGTCTTCCAAGGGATGAAGTCCCTGGCCTGTGATGCTGATTATAACCGCATATTGGCA AATGGCATTGACTAGGCTCGTTTGTAATGTACAGAAGTAGTACATACAGCTAGTTTTTTT TTTCCCTTTTGGCCGCCTTCAGTGGTATATATGATTGAAATCTGCCCAAGAGAAATTGCA AATGATGGTGCAACTCAGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGA AAAAGCGAGTGATACGAGATCCTAGAGCAATTCATGCAGCTATGGTTTGGTGAGTTTGTG ATGGTGCAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13468#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 679
fasta sequence
                              [GGTTTACTTGGTATATTTATTCTTATCNTGCGCAGTGGAATTACATTATACCAAGTTAATAGGCTGCACTGTTAATGTTCAGGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCA-CCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACA-ATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTCGCCCCACCCTCTGGATCTTTACATGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCCTGTGAT-GCTGATTATAACCGCATATTGGCAAATGGCATTGACTAGGCTCGTTTGTAATGTACAGAAGTAGTACATACAGCTAG-TTTTTTTTTTCCCTTTTGGCCGCCTTCAGTTGTATATATGATTGAAATCTGCCCAAGAGAAATTGCAAATGATGGTGCAACTCAGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAAAGCGAGTGATACGAGATCCTAGAGCAAAAAAAAAAAAAA]

[-] EMBL CA759681             [GGTTTACTTGGTATATTTATTCTTATCNTGCGCAGTGGAATTACATTATACCAAGTTAATAGGCTGCACTGTTAATGTTCAGGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCA CCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACA ATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTCGCCCCACCCTCTGGATCTTTACATGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCCTGTGAT GCTGATTATAACCGCATATTGGCAAATGGCATTGACTAGGCTCGTTTGTAATGTACAGAAGTAGTACATACAGCTAG TTTTTTTTTTCCCTTTTGGCCGCCTTCAGTTGTATATATGATTGAAATCTGCCCAAGAGAAATTGCAAATGATGGTGCAACTCAGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAAAGCGAGTGATACGAGATCCTAGAGCAAAAAAAAAAAAAA]
[+] EMBL BM421243             [                                                                                                                                                CTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACACATTGGACCAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTCGCCCCACCCTCTGGATCTTTACATGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCCTGTGATCGCTGATTATAACCGCATATTGGCAAATGGCATTGACTAGGCTCGTTTGTAATGTACAGAAGTAGTACATACAGCTAGTTTTTTTTTTTCCCTTTTGGCCGCCTTCAGTTGTATATATGATTGAAATCTGCACAAGAGAAATTGCAAATGATGGTGCAACTCAGCTTGATCATTAaaaaaaaaa                                                                ]


>consensus_13468#2 GGTTTACTTGGTATATTTATTCTTATCNTGCGCAGTGGAATTACATTATACCAAGTTAAT AGGCTGCACTGTTAATGTTCAGGTTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTG ACAAAGCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTT TGGATAAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAG GTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAA AAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATA CAAGTTTCGCCCCACCCTCTGGATCTTTACATGTAGCACAGTCTTCCAAGGGATGAAGTC ACTGGCCTGTGATGCTGATTATAACCGCATATTGGCAAATGGCATTGACTAGGCTCGTTT GTAATGTACAGAAGTAGTACATACAGCTAGTTTTTTTTTTCCCTTTTGGCCGCCTTCAGT TGTATATATGATTGAAATCTGCCCAAGAGAAATTGCAAATGATGGTGCAACTCAGCTTGA TCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAAAGCGAGTGATACGAGATCCT AGAGCAAAAAAAAAAAAAA



consensusID : consensus_13468#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 518
fasta sequence
                              [TTTGCCTGNTCCTAAATTTACCAAACTGAAGACTCTGGTACTTAATGATTCCTGTGTGGCTTCTGACCTCAATGCACTAATTTATTTTCTCCAACACTCACCACGTTCTGGAGAAGCTTACACCTACAGCTTTCCCAGACATGAAAAGATTCATTGCAAACACACTGGAAATTACACAGTATCTTAAGAAGGTTCCGTTTGACCTTAAGAAGGTTGAAATCAATGTGATGAAGTTGATGAAAGAGTTTGCCAAGTTCTCAGATCTTGAGTGCTTATGTAACCCCGCTCCCAATTGATATGAGAGATATATGTGAGTTAAATATTTAATGCCACTCCTTTCCACTTTATCCAAATATCTATAAATTATAACCATCGTGAGGAAAATATTTGGCTAATTAGAGGGACCATTGTTCAGGACAGGTAGAAACTCTCCCCATATTTCATGAAACGAAAGTGAAAACCATTGTCAGCATCATCATACATAACNTATCAAATGAGTTTCGTTTTGAAAAAAAAAA]

[+] EMBL BM038850             [TTTGCCTGNTCCTAAATTTACCAAACTGAAGACTCTGGTACTTAATGATTCCTGTGTGGCTTCTGACCTCAATGCACTAATTTATTTTCTCCAACACTCACCACGTTCTGGAGAAGCTTACACCTACAGCTTTCCCAGACATGAAAAGATTCATTGCAAACACACTGGAAATTACACAGTATCTTAAGAAGGTTCCGTTTGACCTTAAGAAGGTTGAAATCAATGTGATGAAGTTGATGAAAGAGTTTGCCAAGTTCTCAGATCTTGAGTGCTTATGTAACCCCGCTCCCAATTGATATGAGAGATATATGTGAGTTAAATATTTAATGCCACTCCTTTCCACTTTATCCAAATATCTATAAATTATAACCATCGTGAGGAAAATATTTGGCTAATTAGAGGGACCATTGTTCAGGACAGGTAGAAACTCTCCCCATATTTCATGAAACGAAAGTGAAAACCATTGTCAGCATCATCATACATAACNTATCAAATGAGTTTCGTTTTGAAAAAAAAAA]


>consensus_13468#3 TTTGCCTGNTCCTAAATTTACCAAACTGAAGACTCTGGTACTTAATGATTCCTGTGTGGC TTCTGACCTCAATGCACTAATTTATTTTCTCCAACACTCACCACGTTCTGGAGAAGCTTA CACCTACAGCTTTCCCAGACATGAAAAGATTCATTGCAAACACACTGGAAATTACACAGT ATCTTAAGAAGGTTCCGTTTGACCTTAAGAAGGTTGAAATCAATGTGATGAAGTTGATGA AAGAGTTTGCCAAGTTCTCAGATCTTGAGTGCTTATGTAACCCCGCTCCCAATTGATATG AGAGATATATGTGAGTTAAATATTTAATGCCACTCCTTTCCACTTTATCCAAATATCTAT AAATTATAACCATCGTGAGGAAAATATTTGGCTAATTAGAGGGACCATTGTTCAGGACAG GTAGAAACTCTCCCCATATTTCATGAAACGAAAGTGAAAACCATTGTCAGCATCATCATA CATAACNTATCAAATGAGTTTCGTTTTGAAAAAAAAAA



consensusID : consensus_13468#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence
                              [TTTTTACTTGAATAACTTCGCTTGCAGGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTCGCCCCACCCTCTGGATCTTTACATGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCCTGTGATGCTGATTATAACCGCATATTGGGCAAATGGCATTGACTAGGCTCGTTGTAATGTACAGAAGTAGTACATACAGGTAGTTTTTTTTTTTCCCTTTGGGCGCTTCAGTTGTATATATGATTGAAATCTTGGAAAGCTGTAGTGTAAGCTTCTCCAGAACTGGTGAGTGTTGGAGAAAATAAATTAGGTGCATGAGGTCAGAAGCCACACGAGGAATCATTAAGTACCAGAGTCTTCAGTTGGTGAAATTTAGGACAGGAATTC]

[-] EMBL BI812113             [TTTTTACTTGAATAACTTCGCTTGCAGGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATGGACAAAAGCACTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTCGCCCCACCCTCTGGATCTTTACATGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCCTGTGATGCTGATTATAACCGCATATTGGGCAAATGGCATTGACTAGGCTCGTTGTAATGTACAGAAGTAGTACATACAGGTAGTTTTTTTTTTTCCCTTTGGGCGCTTCAGTTGTATATATGATTGAAATCTTGGAAAGCTGTAGTGTAAGCTTCTCCAGAACTGGTGAGTGTTGGAGAAAATAAATTAGGTGCATGAGGTCAGAAGCCACACGAGGAATCATTAAGTACCAGAGTCTTCAGTTGGTGAAATTTAGGACAGGAATTC]


>consensus_13468#4 TTTTTACTTGAATAACTTCGCTTGCAGGATTGAAGGTGACAAAGTAGGGAGCTATACAAT CTTCTTAAGTTTCAATAAACTTGACAATGGACAAAAGCACTAAAATACATGCTGTGCAAC TTGAAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTCGCCCCACCCTCTGGATCT TTACATGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCCTGTGATGCTGATTATAACC GCATATTGGGCAAATGGCATTGACTAGGCTCGTTGTAATGTACAGAAGTAGTACATACAG GTAGTTTTTTTTTTTCCCTTTGGGCGCTTCAGTTGTATATATGATTGAAATCTTGGAAAG CTGTAGTGTAAGCTTCTCCAGAACTGGTGAGTGTTGGAGAAAATAAATTAGGTGCATGAG GTCAGAAGCCACACGAGGAATCATTAAGTACCAGAGTCTTCAGTTGGTGAAATTTAGGAC AGGAATTC



consensusID : consensus_13468#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence
                              [GCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGCTTCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGNNNTTGCTGTCTGATAAAATGGNNNNNNAAATTGAAGATNNNAATACTGACAATAAAGCTTATNANNNNTGTCTNNNNNNTCTGGA]

[+] EMBL CF196711             [GCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGCTTCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTTGTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACTCTGTCTGGACTGTATGNNNTTGCTGTCTGATAAAATGGNNNNNNAAATTGAAGATNNNAATACTGACAATAAAGCTTATNANNNNTGTCTNNNNNNTCTGGA]


>consensus_13468#5 GCTATCGAAGCAAAATAGATCACATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGG GATCCCGCGTGCCGAGCCGAACCAACCAACAAGAGCAATGGAGGGATCATATATAGTGCT TCCACCTGCTGCCGCTTCCATATACAAGACATCTGCCTCTGAAGGAGGTGGTGCGCAGTT GTCACCAACAAGTATGAACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGT GACTGTATTAAAACGGGCATTTGAGATTGCTACATCACAAACACAGATTGAACAGCCACT CTGTCTGGACTGTATGNNNTTGCTGTCTGATAAAATGGNNNNNNAAATTGAAGATNNNAA TACTGACAATAAAGCTTATNANNNNTGTCTNNNNNNTCTGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13468#0      GCTACCTCTCTCTCTCTCGACTCCCGAGCAGGCGACTCCTCCCTCCCCGGCGATTCCGCC 60
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      GCTCCGACCGCCGTCTCTCCGCGCCGCGCACGTGAGCCCCCCGTCGCCTTCCTCGCACGG 120
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      ACTCTGCCCCCGCCGGAATCTCATCTCCTACGCCTCAAACCCCCACCCCGCGACGCCGCC 180
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      TAGCCGCGATTTTCCTGCGGGGTACTCCACCGCCCCTGGAGGCTGGAGCCGTGCTCTCCG 240
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      GATCGGCGTTGGATTGGTAGCGCTCGCGTCCTGCTCTGTCGGGCGGCGATATGAAGCCCC 300
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      --------------------------------------------------GGTTTACTTG 10
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      CTGCATCCTCCGCCGCCGCTGCCGGCGACAAGGGCGGCGGGGTCGACCCGTCTCTGCCGC 360
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      -------------------------------GAAGCTATCCAAGGGTTTCAGCCTCCACC 29
consensus_13468#2      GTATATTTATTCTTATCNTGCGCAGTGGAATTACATTATACCAAGTTAATAGGCTGCACT 70
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      GGTTCAAGTGCCAGGAGTGCCAACGCGCGCTCGTCGTCGTCGGCGTCGAGTCCTTCACCG 420
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      CAAAATACATATGAACTGTTCGGTCCTGTGAATTT-TTCTGGAGTACCCGATTTGGCAAA 88
consensus_13468#2      GTTAATGTTCAGG-----TTCGGTCCTGTGAATTTATTCTGGAGTACCCGATTTGACAAA 125
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      ATAAGCTCCCCGCTCATGCCGTCTCCGGTATGAACGTGTCCTCTGTTCAGGGCAGCGTTA 480
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      GCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGAT 148
consensus_13468#2      GCCATGACATGGTTTCTGACTTGCTTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGAT 185
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      TGGGTGCTAGCAGGATGGACAACTCTTATGTCGTGCTATCGAAGCAAAAT---AGATCAC 537
consensus_13468#5      ----------------------------------GCTATCGAAGCAAAAT---AGATCAC 23
consensus_13468#1      AAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGAC 208
consensus_13468#2      AAAGAGAACAATGTACCACCTGACAAGTCATTGAAGCTCCCATATAAGATTGAAGGTGAC 245
consensus_13468#4      --------------------TTTTTACTTGAATAACTTCGCTTGCAGGATTGAAGGTGAC 40
consensus_13468#3      ------------------------TTTGCCTGNTCCTAAATTTACCAAACTGAAGACTCT 36
                                                                       *    **     

consensus_13468#0      ATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACC 597
consensus_13468#5      ATAGCCATGGAATTCCCCCACGCCCGCCAAGCGCAGGGATCCCGCGTGCCGAGCCGAACC 83
consensus_13468#1      AAAGT-AGGGAGCTATCCAATCTTTTTAAGTTTCAATAAACTTGACAATTGGACAAAAGC 267
consensus_13468#2      AAAGT-AGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAATTGGACAAAAGC 304
consensus_13468#4      AAAGT-AGGGAGCTATACAATCTTCTTAAGTTTCAATAAACTTGACAAT-GGACAAAAGC 98
consensus_13468#3      GGTACTTAATGATTCCTGTGTGGCTTCTGACCTCAATGCACTAATTTATTTTCTCCAACA 96
                                    *                   **     *               **  

consensus_13468#0      AACCAACAAGAGCAATGGAGGGATCATATATAGTGCTTCCACCTGCT-----GCCGCTTC 652
consensus_13468#5      AACCAACAAGAGCAATGGAGGGATCATATATAGTGCTTCCACCTGCT-----GCCGCTTC 138
consensus_13468#1      C--CTAAAATACCTGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTT----ATCGGCAA 321
consensus_13468#2      A--CTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTT----ATCGGCAA 358
consensus_13468#4      A--CTAAAATACATGCTGTGCAACTTGAAGTGGGTTCTCTACTGGTTT----ATCGGCAA 152
consensus_13468#3      CTCACCACGTTCTGGAGAAGCTTACACCTACAGCTTTCCCAGACATGAAAAGATTCATTG 156
                                          *            *     * *                   

consensus_13468#0      CATATACAAGACATCTGCCTCTGAAGGAGGTGGTG--CGCAGTTGTCACCAACAAGTATG 710
consensus_13468#5      CATATACAAGACATCTGCCTCTGAAGGAGGTGGTG--CGCAGTTGTCACCAACAAGTATG 196
consensus_13468#1      TACAAGTTTCGCCCCCCCCTCTGGATCTTTACATG--TAGCCCAGTCTTCCA-AGGGATG 378
consensus_13468#2      TACAAGTTTCGCCCCACCCTCTGGATCTTTACATG--TAGCACAGTCTTCCA-AGGGATG 415
consensus_13468#4      TACAAGTTTCGCCCCACCCTCTGGATCTTTACATG--TAGCACAGTCTTCCA-AGGGATG 209
consensus_13468#3      CAAACACACTGGAAATTACACAGTATCTTAAGAAGGTTCCGTTTGACCTTAAGAAGGTTG 216
                        * *              * * * *         *         * *    * * *  **

consensus_13468#0      AACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTA-----TTAA 765
consensus_13468#5      AACCCCGGTAGCCCTTTACCAGGAAATAATTTTCACTCTAGCGTGACTGTA-----TTAA 251
consensus_13468#1      AAGTC-CCTGGCCTGTGATGCTGATTATAACCGCATATTGG-CAAATGGCA-----TTGA 431
consensus_13468#2      AAGTC-ACTGGCCTGTGATGCTGATTATAACCGCATATTGG-CAAATGGCA-----TTGA 468
consensus_13468#4      AAGTC-ACTGGCCTGTGATGCTGATTATAACCGCATATTGGGCAAATGGCA-----TTGA 263
consensus_13468#3      AAATCAATGTGATGAAGTTGATGAAAGAGTTTGCCAAGTTCTCAGATCTTGAGTGCTTAT 276
                       **  *     *           **         *    *      *          **  

consensus_13468#0      A-ACGGGCATTTGAGATTGCTACA--TCACAAACACAGATTGAACAGCCACT-----CTG 817
consensus_13468#5      A-ACGGGCATTTGAGATTGCTACA--TCACAAACACAGATTGAACAGCCACT-----CTG 303
consensus_13468#1      CTAGGCTCGTTTGTAATGTACAGAAGTAGTACATACAGCTAGTTTTTTTTTT-----CCC 486
consensus_13468#2      CTAGGCTCGTTTGTAATGTACAGAAGTAGTACATACAGCTAGTTTTTTTTTT-----CCC 523
consensus_13468#4      CTAGGCTCGTT-GTAATGTACAGAAGTAGTACATACAGGTAGTTTTTTTTTT-----TCC 317
consensus_13468#3      GTAACCCCGCTCCCAATTGATATGAGAGATATATGTGAGTTAAATATTTAATGCCACTCC 336
                         *    *  *    **    *        * *      *           *        

consensus_13468#0      TCTGGACTGTATGAGGTTGC-TGTCTGATAAAATGGAGA----AGGAAATTGAAGATGTT 872
consensus_13468#5      TCTGGACTGTATGNNNTTGC-TGTCTGATAAAATGGNNN----NNNAAATTGAAGATNNN 358
consensus_13468#1      TTTTGGCCGCCTTCAGTGGTATATATGATTGAAATCTGCCCAAGAGAAATTGCAAATGAT 546
consensus_13468#2      TTTTGGCCGCCTTCAGTTGTATATATGATTGAAATCTGCCCAAGAGAAATTGCAAATGAT 583
consensus_13468#4      CTTTGGGCGC-TTCAGTTGTATATATGATTGAAATCTT-----GGAAAGCTGTAGTGTAA 371
consensus_13468#3      TTTCCACTTTATCCAAATATCTATAAATTATAACCATCGTGAGGAAAATATTTGGCTAAT 396
                         *        *         * *    *  **             **  *         

consensus_13468#0      AATACTGACAATAAAGCTTATGAGGCCTGTC---TTCAACGTCTGGAGCAGGAAACCTAT 929
consensus_13468#5      AATACTGACAATAAAGCTTATNANNNNTGTC---TNNNNNNTCTGGA------------- 402
consensus_13468#1      GGTGCAACTCAGCTTGATCATTATTCATGTAA--TTATTTAGCCATGTGTGA-CAGAAA- 602
consensus_13468#2      GGTGCAACTCAGCTTGATCATTATTCATGTAA--TTATTTAGCCATGTGTGA-CAGAAA- 639
consensus_13468#4      GCTTCTCCAGAACTGGTGAGTGTTGGAGAAAA--TAAATTAGGTGCATGAGGTCAGAAGC 429
consensus_13468#3      TAGAGGGACCATTGTTCAGGACAGGTAGAAACTCTCCCCATATTTCATGAAACGAAAGTG 456
                                 *                       *                         

consensus_13468#0      AACATCCTCAGTGAAACTGACTTTCAGAAGGAGAGACAAAAGATTGAGGAAGAAGAAAAG 989
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      -AAGCGAGTGAT-ACGAGATCCTAGAGCAATTCATGCAGCTATGGTTTGGTGAGTTTGTG 660
consensus_13468#2      -AAGCGAGTGAT-ACGAGATCCTAGAGCAAAAAAAAAAAAAA------------------ 679
consensus_13468#4      CACACGAGGAATCATTAAGTACCAGAGTCTTCAGTTGGTGAAATTTAGGACAGGAATTC- 488
consensus_13468#3      AAAACCATTGTCAGCATCATCATACATAACNTATCAAATGAGTTTCGTTTTGAAAAAAAA 516
                                                                                   

consensus_13468#0      AAACTTAAAGCTGCAATTGAGGAAGCTGAAAAGCAATATTCAGAAATTTGTTCCGAGATG 1049
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ATGGTGCAAAAAAAAAAAAAAAAAAAAA-------------------------------- 688
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      AA---------------------------------------------------------- 518
                                                                                   

consensus_13468#0      AAGTGCCTTGAAACAAAATCTAAACAGTTCGAAGAACTGGAAGAAAGGTATTGCCATGAT 1109
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      CTCAATAGCTTTCAGTTTCAGTGGATATCTCACCAGGAAGAAAGAGATGCGGTTTTGGCC 1169
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      AAGATAGAAGTTTCGCAGGTTCATCTAGAATTGTTAAAGCGTACAAATGTTCTCAATGAT 1229
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      GCATTCTATATTTCACATGATGGGGTGATCGGAACAATAAACAACTTTCGTCTTGGCCGC 1289
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      CTTCCTAATGTACAGGTGGAGTGGGATGAGATAAATGCTGCTTGGGGCCAGGCTGCTCTT 1349
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      CTGTTGCATACCATGGCTCAGTACTTCTTCCCAAAATTTGAATACCGGATCAAAATTCAC 1409
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      CCTATGGGAAGCTATCCAAAAGTTACAGACATCAACCAAAATACATATGAACTGTTCGGT 1469
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      CCTGTGAATTTATTCTGGAGTACCCGATTTGACAAAGCCATGACATGGTTTCTGACTTGC 1529
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      TTGCAAGAATTTGCTGATTTTGCTGTTAGTTTGGATAAAGAGAACAATGTACCACCTGAC 1589
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      AAGTCATTGAAGCTCCCATATAAGATTGAAGGTGACAAAGTAGGGAGCTATACAATCTTC 1649
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      TTAAGTTTCAATAAACTTGACAATTGGACAAAAGCACTAAAATACATGCTGTGCAACTTG 1709
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      AAGTGGGTTCTCTACTGGTTTATCGGCAATACAAGTTTTGCCCCACCCTCTGGATCTTTA 1769
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      CACGTAGCACAGTCTTCCAAGGGATGAAGTCACTGGCTTGTGATGCTGATTATAAGCGCA 1829
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      TATTGGCAAATGGCATTGACTAGGCTCGTTTGTAATTTACAGTAGTACATACAGCTAGTT 1889
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      TTTTTTTTCCTTTTGGCCGCCTTCAGTTGTACTTCCTCCGTTTCACAATGTAAGTCATCA 1949
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      TAGCATTTCCCATATTTATAATGATGTTAATGAATCTATATAGATATATATGTCTAGATT 2009
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      TATTAACGTCAATATGAATATAGGAAATGCTAGAATGACTTACATTGTGAAACGGGGGGA 2069
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      GTATATATGGTTGAAATCTGCACAGGAAAAATTGCAGATGATGGTGCAACTCAGCTTATA 2129
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      GTCGGCTTGATCATTATTCATGTAATTATTTAGCCATGTGTGACAGAAAATGCGAGTGAT 2189
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      ACGAGATCCTAGAGCAATTCATGCAGCTCTGGTTAGGTGAGTTTGTGATGGTGCAATCAA 2249
consensus_13468#5      ------------------------------------------------------------
consensus_13468#1      ------------------------------------------------------------
consensus_13468#2      ------------------------------------------------------------
consensus_13468#4      ------------------------------------------------------------
consensus_13468#3      ------------------------------------------------------------
                                                                                   

consensus_13468#0      CAGCATATCCAATCAACATTAAGATTTATAAGAGATGAAATGTCTTCAGCAACAAAAA 2307
consensus_13468#5      ----------------------------------------------------------
consensus_13468#1      ----------------------------------------------------------
consensus_13468#2      ----------------------------------------------------------
consensus_13468#4      ----------------------------------------------------------
consensus_13468#3      ----------------------------------------------------------
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)