cluster # 13469

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Oryza sativa
cluster # 13469 cluster # 13469 Sequences # 13 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13469#0 length = 2215 sequences # 11

consensus_13469#1 length = 464 sequences # 2

consensusID : consensus_13469#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 2215
fasta sequence

                              [TTCTTCCTGCTTCCTCTCTCTCTCTTCTCTCCTCCTCCTCCCACTGAGATCCCTCTCCCCTCCCCGCCATCGCCATGGCTCCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGACGAGACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCACGGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAAGATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAG-CCGATAAAGAAGTA-TTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGCTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAAAAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGTACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCGCCCAAATGTTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAACCAAATAATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAGCCTGTTTCCGAGTCAAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGACGTGCTTGATTCGATGGATCCTAGACACCCTGAGGGAGCAACTGATGAGTTTGTGTTGGATCTTGTGGAGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAGGGATGAAGTGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGTACGGCATGATGCGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAGGAAGAGGAAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATCGGAAGATTATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGCCGCCCACTCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGCTCGCCATATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGTGGCAAGCTGTGTGAGTGACCATCTGCATTGGTTTTACTCTACTTTCATCTCCTTTTGGCTTTCTGATGTGTAGTAGTGGAGTAGTGCTGTGGGTTTTGCTTGTGTCAGAAGCGTGCCATTCGGCTTTTAGCCAGCAGATAATGGATCAGTTGAGCCCCATGATCATGGTGGTGTTGTGGGTCACTCTTCTCAATAGCATTGTAAAAGATTATGCCCATGACTATGAGACACCTTTCTGGCAAGACCAAAGATCCACTAGTATCCTGGAGTAAGTATCTTTGAGACAATCTTGAATGGTTAGGCTGGCTTGCCAAAGTATTTGACTCTACCTGCTAGTGGAGTAGAGATCTGGCAGATTACTGGTATTATTTTATGTTCAAGTGGGTATGCATTCTTTGGAAGGCATACATTTTTTTATTTTCTAGTTACATGGGGTAGCATATAGGAGCAAAGATTTGTGTTGAACTGTTTGTAGAATTTGTGTAGCAAGGGAAATGACCAATTGGACAATAGGAAAACGATCATCAATCATGAC]

[+] EMBL AK107316             [TTCTTCCTGCTTCCTCTCTCTCTCTTCTCTCCTCCTCCTCCCACTGAGATCCCTCTCCCCTCCCCGCCATCGCCATGGCTCCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGACGAGACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCACGGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAAGATGGCCTCGGAAATGTTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAG CCGATAAAGAAGTA TTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGCTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAAAAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGTACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCGCCCAAATGTTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAACCAAATAATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAGCCTGTTTCCGAGTCAAGTATGATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGACGTGCTTGATTCGATGGATCCTAGACACCCTGAGGGAGCAACTGATGAGTTTGTGTTGGATCTTGTGGAGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAGGGATGAAGTGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGTACGGCATGATGCGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAGGAAGAGGAAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATCGGAAGATTATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGCCGCCCACTCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGCTCGCCATATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGTGGCAAGCTGTGTGAGTGACCATCTGCATTGGTTTTACTCTACTTTCATCTCCTTTTGGCTTTCTGATGTGTAGTAGTGGAGTAGTGCTGTGGGTTTTGCTTGTGTCAGAAGCGTGCCATTCGGCTTTTAGCCAGCAGATAATGGATCAGTTGAGCCCCATGATCATGGTGGTGTTGTGGGTCACTCTTCTCAATAGCATTGTAAAAGATTATGCCCATGACTATGAGACACCTTTCTGGCAAGACCAAAGATCCACTAGTATCCTGGAGTAAGTATCTTTGAGACAATCTTGAATGGTTAGGCTGGCTTGCCAAAGTATTTGACTCTACCTGCTAGTGGAGTAGAGATCTGGCAGATTACTGGTATTATTTTATGTTCAAGTGGGTATGCATTCTTTGGAAGGCATACATTTTTTTATTTTCTAGTTACATGGGGTAGCATATAGGAGCAAAGATTTGTGTTGAACTGTTTGTAGAATTTGTGTAGCAAGGGAAATGACCAATTGGACAATAGGAAAACG               ]
[+] EMBL AK067345             [  CTTCCTGCTTCCTCTCTCTCTCTTCTCTCCTCCTCCTCCCACTGAGATCCCTCTCCCCTCCCCGCCATCGCCATGGCTCCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGACGAGACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCACGGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAAGATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAG CCGATAAAGAAGTA TTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGCTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAAAAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGTACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCGCCCAAATGTTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAACCAAATAATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAGCCTGTTTCCGAGTCAAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGACGTGCTTGATTCGATGGATCCTAGACACCCTGAGGGAGCAACTGATGAGTTTGTGTTGGATCTTGTGGAGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAGGGATGAAGTGGTGGTATCACAAGCAATAGAACTGAACG AGAGCTTCACAAGGTCCTTGTACGGCATGATGCGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAGGAAGAGGAAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATCGGAAGATTATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGCCGCCCACTCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGCTCGCCATATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGTGGCAAGCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB627600             [                     CTCTTCTCTCCTCCTCCTCCCACTGAGATCCCTCTCCCCTCCCCGCCATAGCCATGGCTTCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGGCGAGACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCGCGGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAAGATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAG CCGATAAAGAAGTA TTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGCTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAAAAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGTACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCGCCCAAATGTTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAACCAAATAATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAGCCTGTTTCCGAGTCAAGTATAATTCGGAAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU069438             [                            CTCCTCCTCCTCCCACTGAGATCCCTCTCCCCTCCCCGCCATCGCCATGGCTCCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGACGAGACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCACGGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAAGATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAGCCCGATTAAGAAGTATTTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU183261             [                                                  CCCTCTCCCCTCCCCGCCATCGCCATGGCTCCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGACGAGACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCACGGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAAGATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAG CCGATAAAGAAGTA TTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGCTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAAAAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGTACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB679720             [                                                                          ATGGCTCCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGACGAGACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCACGGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAAGATGGCCTCGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACATCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAG CCGATAAAGAAGTA TTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGCTGTTAGAAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTCTCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAAAAAATATTTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGTACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCGCCCAAATGTTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAACCAAATAATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAGCCTGTTTCCGAGTCAAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGACGTGCTTGATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB000310             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GACAGAAGGAAGTGCATGCGCAGCCTGTTTCCCAGTCAAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGACGTGCTTGATTCGATGGATCCTAGACACCCTGAGGGAGCAACTGATGAGTTTGTGTTGGATCTTGTGGAGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAGGGATGAAGTGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGTACGGCATGATGCGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAGGAAGAGGAAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATCGGAAGATTATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGCCGCCCACTCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGCTCGCCATATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB679721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTTATGACATCAAGGGATGAAGTGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGTACGGCATGATGCGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAGGAAGAGGAAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATCGGAAGATTATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGCCGCCCACTCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGCTCGCCATATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGAATGCAGTTCTATAGAGATGCTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU173506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGTGGCAAaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM039041             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGAA CGAGGCCT ACGT CTGATTCCACCACCGCCTGCCAAGCAC CCGAGAGGGAGAGGTTCTTCCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATTGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAAC ATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGTGGCAAGCTGTGTGAGTGACCATCTGCATTGGTTTTACTCTACTTTCAaaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB627601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGTGGCAAGCTGTGTGAGTGACCATCTGCATTGGTTTTACTCTACTTTCATCTCCTTTTGGCTTTCTGATGTGTAGTAGTGGAGTAGTGCTGTGGGTTTTGCTTGTGTCAGAAGCGTGCCATTCAGCTTTTAGCCAGCAGATAATGGATCAGTTGAGCCCCATGATCATGGTGGTGTTGTGGGTCACTCTTCTCAATAGCATTGTAAAAGATTATGCCCATGACTATGAGACACCTTTCTGGCAAGACCAAAGATCCACTAGTATCCTGGAGTAAGTATCTTTGAGACAATCTTGAATGGTTAGGCTGGCTTGCCAAAGTATTTGACTCTACCTGCTAGTGGAGTAGAGATCTGGCAGATTACTGGTATTATTTTATGTTCAAGTGGGTATGCATTCTTTGGAAGGCATACATTTTTTTATTTTCTAGTTACATGGGGTAGCATATAGGAGCAAAGATTTGTGTTGAACTGTTTGTAGAATTTGTGTAGCAAGGGAAATGACCAATGGGACAATAGGAAAACGATCATCAATCATGAC]




>consensus_13469#0
TTCTTCCTGCTTCCTCTCTCTCTCTTCTCTCCTCCTCCTCCCACTGAGATCCCTCTCCCC
TCCCCGCCATCGCCATGGCTCCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGACGA
GACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCAC
GGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAAGATGGCCT
CGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACA
TCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAGCCGA
TAAAGAAGTATTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGCTGTTAG
AAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTC
TCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAAAAAATAT
TTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGT
ACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCGCCCAAATG
TTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAACCAAATA
ATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAGCCTGTTT
CCGAGTCAAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGACGTGCTTG
ATTCGATGGATCCTAGACACCCTGAGGGAGCAACTGATGAGTTTGTGTTGGATCTTGTGG
AGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAGGGATGAAG
TGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGTACGGCATG
ATGCGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAGGAAGAGG
AAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATCGGAAGATT
ATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGCCGCCCAC
TCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGCTCGCCAT
ATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGG
AGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTAT
CATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAG
GTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTT
GCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTTCTCGCTGA
CCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACA
TTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGT
GGCAAGCTGTGTGAGTGACCATCTGCATTGGTTTTACTCTACTTTCATCTCCTTTTGGCT
TTCTGATGTGTAGTAGTGGAGTAGTGCTGTGGGTTTTGCTTGTGTCAGAAGCGTGCCATT
CGGCTTTTAGCCAGCAGATAATGGATCAGTTGAGCCCCATGATCATGGTGGTGTTGTGGG
TCACTCTTCTCAATAGCATTGTAAAAGATTATGCCCATGACTATGAGACACCTTTCTGGC
AAGACCAAAGATCCACTAGTATCCTGGAGTAAGTATCTTTGAGACAATCTTGAATGGTTA
GGCTGGCTTGCCAAAGTATTTGACTCTACCTGCTAGTGGAGTAGAGATCTGGCAGATTAC
TGGTATTATTTTATGTTCAAGTGGGTATGCATTCTTTGGAAGGCATACATTTTTTTATTT
TCTAGTTACATGGGGTAGCATATAGGAGCAAAGATTTGTGTTGAACTGTTTGTAGAATTT
GTGTAGCAAGGGAAATGACCAATTGGACAATAGGAAAACGATCATCAATCATGAC

consensusID : consensus_13469#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 464
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTCCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATTGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGTGGCAAAAAAAAAAAGTGCCCNAAAAAAAAAAAAAAAAA]

[+] EMBL BQ908448             [CCGCCCACGCGTCCGCCCACGCGTCCGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGGAGAGGTTCTTCCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATTGTCGTCATCTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGTGGCAAAAAAAAAA                         ]
[+] EMBL AU183262             [                                                                                            GATGCCAACTTGCTGGGCCATNTTAGGGGCTTATCATTGCNCAGCCGGGACGGCAGTAGCTNGTGTAGCGGCAGCNCAGATTATGGAGACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTNTTCAGGATGATATTNTGCTTGCCCGGCAATTGATGTTGANANAGGCAGCCTCAGCCTCATCGTCGTCATNTTCTCGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTNTTCCCCCTTCCGCTTACCTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTNTATANANATGCTTGTGTGGCAAGCTGTGTGAGTGCCCNAAAAAAAAAAAAAAAAA]




>consensus_13469#1
CCGCCCACGCGTCCGCCCACGCGTCCGTGCTGATTCCACCACCGCCTGCCAAGCACGCCG
AGAGGGAGAGGTTCTTCCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGG
GCTTATCATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAG
ACTGAGGTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATT
CTGCTTGCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATTGTCGTCATCTTCT
CGCTGACCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTAC
CTGACATTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGC
TTGTGTGGCAAAAAAAAAAAGTGCCCNAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13469#0      TTCTTCCTGCTTCCTCTCTCTCTCTTCTCTCCTCCTCCTCCCACTGAGATCCCTCTCCCC 60
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TCCCCGCCATCGCCATGGCTCCCCCACCGCCGCCGCCGCCGCCGTCGGAGGAAGAGACGA 120
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      GACACTAGAAAAGACGGTTCTTGACCGAGTTTGCGGCCGATCCGGGCTTGGATTTGCCAC 180
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      GGGAAAGGAAGGAGTTTCGGGGGCTGATAGAGTGAAAGGCGACGAGGGAGAAGATGGCCT 240
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      CGGAAATGGTTAAGGCGGCGACGAGTGAGAAGCTCAAGGAGATGGATTGGGCCAAGAACA 300
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TCGAAATCTGCGAGCTCGTCGCTCAGGATCCTGGGAAAGCGAAGGATGTGATCAAGCCGA 360
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TAAAGAAGTATTTAGGTAGCAGGAGCAAGAACACTCAACTTTATGCTGTTATGCTGTTAG 420
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      AAATGCTCATGAATAACTGCGGAGAACCTATCCACAAGCAGGTCATTGATAACGGTCTTC 480
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TCCCGATACTTGTGAAGATTGTGAAGAAAAAGACAGAATTACCAGTTCGTGAAAAAATAT 540
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TTCTTTTGCTGGATGCGACCCAAACATCCCTTGGTGGAGTTAAAGGGAAATTCCCTCAGT 600
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      ACTATGGGGCATATTATGAGTTGGTGTCTGCTGGCGTTCAGTTTTCGAATCGCCCAAATG 660
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TTGTTGTTACACAAGCACAAGCTCCAGTCCCGGTCCCAGAACCAACAATCGAACCAAATA 720
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      ATAACAGTTTATCTAGGAGATTGGACGAAGGACAGAAGGAAGTGCATGCGCAGCCTGTTT 780
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      CCGAGTCAAGTATAATTCGGAAAGCTTCTAGTGTCATGGAAGTTCTAAAGGACGTGCTTG 840
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      ATTCGATGGATCCTAGACACCCTGAGGGAGCAACTGATGAGTTTGTGTTGGATCTTGTGG 900
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      AGCAATGCACATTTCAAAAACAGCGAATAATGCATCTAGTTATGACATCAAGGGATGAAG 960
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TGGTGGTATCACAAGCAATAGAACTGAACGAAGAGCTTCACAAGGTCCTTGTACGGCATG 1020
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      ATGCGTTGCTTTCAGTTCAGCCAACTACAACAGTAGCTTCTACTCTCAAGGAGGAAGAGG 1080
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      AAGAAGATGCCGAAAGCCTTTACCGGAGGCTTCGAAAGGGAAAAGCATTATCGGAAGATT 1140
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      ATACAGATGACTCCATACCATCATTTCGATCTATACCTGAAGACAAGATGCGCCGCCCAC 1200
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TCACCATTGAGCCATCCAACACTGATAAGAAACTGGGGGCACTGAATATTCGCTCGCCAT 1260
consensus_13469#1      -------------------------------------------------CCGCCCAC-GC 10
                                                                         *** * *   

consensus_13469#0      ATCCTGAAGCGAGGCCTGACGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGG 1320
consensus_13469#1      GTCCGCCCACGCGTC----CGTGCTGATTCCACCACCGCCTGCCAAGCACGCCGAGAGGG 66
                        ***     ** * *    *****************************************

consensus_13469#0      AGAGGTTCTTTCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTAT 1380
consensus_13469#1      AGAGGTTCTTCCGGGAGAAGAGCATGGATGCCAACTTGCTGGGCCATCTTAGGGGCTTAT 126
                       ********** *************************************************

consensus_13469#0      CATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAG 1440
consensus_13469#1      CATTGCACAGCCGGGACGGCAGTAGCTCGTGTAGCGGCAGCACAGATTATGGAGACTGAG 186
                       ************************************************************

consensus_13469#0      GTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTT 1500
consensus_13469#1      GTGTAGGTATATGCGGTACATAAAGGATTATTTTTTGTTCTTCAGGATGATATTCTGCTT 246
                       ************************************************************

consensus_13469#0      GCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATCGTCGTCATCTTCTCGCTGA 1560
consensus_13469#1      GCCCGGCAATTGATGTTGAGAGAGGCAGCCTCAGCCTCATTGTCGTCATCTTCTCGCTGA 306
                       **************************************** *******************

consensus_13469#0      CCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACA 1620
consensus_13469#1      CCATTGTACACTTGGTTTTCTAATTCTTTTATAATTCTTCCCCCTTCCGCTTACCTGACA 366
                       ************************************************************

consensus_13469#0      TTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGT 1680
consensus_13469#1      TTATCGGAAAGTTGAACAATGCTGTGTTGTGAGCTTTCAGTTCTATAGAGATGCTTGTGT 426
                       ************************************************************

consensus_13469#0      GGCAAGCTGTGTGAGTGACCATCTGCATTGGTTTTACTCTACTTTCATCTCCTTTTGGCT 1740
consensus_13469#1      GGCAAAAAAAAAAAGTGCCCNAAAAAAAAAAAAAAAAA---------------------- 464
                       *****        **** **      *        *                        

consensus_13469#0      TTCTGATGTGTAGTAGTGGAGTAGTGCTGTGGGTTTTGCTTGTGTCAGAAGCGTGCCATT 1800
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      CGGCTTTTAGCCAGCAGATAATGGATCAGTTGAGCCCCATGATCATGGTGGTGTTGTGGG 1860
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TCACTCTTCTCAATAGCATTGTAAAAGATTATGCCCATGACTATGAGACACCTTTCTGGC 1920
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      AAGACCAAAGATCCACTAGTATCCTGGAGTAAGTATCTTTGAGACAATCTTGAATGGTTA 1980
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      GGCTGGCTTGCCAAAGTATTTGACTCTACCTGCTAGTGGAGTAGAGATCTGGCAGATTAC 2040
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TGGTATTATTTTATGTTCAAGTGGGTATGCATTCTTTGGAAGGCATACATTTTTTTATTT 2100
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      TCTAGTTACATGGGGTAGCATATAGGAGCAAAGATTTGTGTTGAACTGTTTGTAGAATTT 2160
consensus_13469#1      ------------------------------------------------------------
                                                                                   

consensus_13469#0      GTGTAGCAAGGGAAATGACCAATTGGACAATAGGAAAACGATCATCAATCATGAC 2215
consensus_13469#1      -------------------------------------------------------