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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13470#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2555 fasta sequence
[CGCGTTTCCATCCCCATCTCCATCTCCTCCTCCTCGCCGCATTCGCATCTCCCTCCTCTCGCCGCCGCCGCCACCGCCACCGCCGCCGCTCCCTTCCTGCCATTACCGCCCGTGCCCCTCACCCCCCTTTGCCCCTCGATCTCTCCCCCCTAGGGTAGGGTAGGGGCTTGCCTCCGATTCCGTACGGACACACCCTACCTAGGGTAGGGTAGGGGTAGGGGTAGGGTTGATAGAGAGAGGTTCCGGGATGACGGCCGGCGAGGGCTGCGCGGCCCGACGCGGGTGATCCGCTCTCACGCGGGGAGCACCTCTCGCGCGCGCTTGCTTCACGTGGGGGATCCCGTCGCGGCTATCCCTCCTCTCCTCTCTTCTTCCCCCTTCTAGTCTAGTTTAGGGTTTTCTATCTATCCATCTAGATTTTGATCTTCCCCTCCTCGCTGCTTCCCCTCGCCCTTCTGACCTGGCGCAGATGTTTTCCCACGGCGCTGATTCCGCCCACGACGCCGGCGCCGTCAGCACCGGTGCCTCCGGCGTCCCCACGCGCTTCGTCTGGCCCTACGGTGGCAAGAGGGTCTACCTCACCGGCTCCTTTACCAGGTGGACAGAACATTTGCCAATGTCTCCTGTTGAAGGTTGTCCCACCGTTTTTCAGGCCATATGCAGTTTGTCCCCTGGGATTCATCAGTACAAGTTTTGTGTGGATGGGGAATGGCGGCACGATGAGCGGCAACCTACCATAACAGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAGGGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACATGGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGAAGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTTTCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAAGGTCATTGCTCTAGACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTCTTCATGAACAGGGAATTCCTGTGGCACCTCTATGGGATTCATTCAGGGGCCAGTTTGTTGGCCTTTTGAGCCCACTGGATTTTATACTCATATTGAGAGAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCCACCCCTTATGAATCCCTGAGGGAAATTGCTATGAAGATACTGCAAAACGGTGTTTCTACCGTTCCAATTATGTTTTCCTCATCACCAGATGGCTCATATCCACAATTGTTGCATCTTGCTTCCCTTTCTGGAATTTTGAAATGTATTTGTAGATATTTTAAAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTATGCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG-CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTC-TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAAAAAAAAAAGAAGAGAAACTATTGGATATCTGATGATGTAGTGACTGAGAAGCAGGAGTGGAGTTGTGTAAAACCCTGTACCACCCTGATTTTTATGTCTAAACCGCAGCTTACTCAAAAAAAAAAGGA]
[+] EMBL AK111501 [CGCGTTTCCATCCCCATCTCCATCTCCTCCTCCTCGCCGCATTCGCATCTCCCTCCTCTCGCCGCCGCCGCCACCGCCACCGCCGCCGCTCCCTTCCTGCCATTACCGCCCGTGCCCCTCACCCCCCTTTGCCCCTCGATCTCTCCCCCCTAGGGTAGGGTAGGGGCTTGCCTCCGATTCCGTACGGACACACCCTACCTAGGGTAGGGTAGGGGTAGGGGTAGGGTTGATAGAGAGAGGTTCCGGGATGACGGCCGGCGAGGGCTGCGCGGCCCGACGCGGGTGATCCGCTCTCACGCGGGGAGCACCTCTCGCGCGCGCTTGCTTCACGTGGGGGATCCCGTCGCGGCTATCCCTCCTCTCCTCTCTTCTTCCCCCTTCTAGTCTAGTTTAGGGTTTTCTATCTATCCATCTAGATTTTGATCTTCCCCTCCTCGCTGCTTCCCCTCGCCCTTCTGACCTGGCGCAGATGTTTTCCCACGGCGCTGATTCCGCCCACGACGCCGGCGCCGTCAGCACCGGTGCCTCCGGCGTCCCCACGCGCTTCGTCTGGCCCTACGGTGGCAAGAGGGTCTACCTCACCGGCTCCTTTACCAGGTGGACAGAACATTTGCCAATGTCTCCTGTTGAAGGTTGTCCCACCGTTTTTCAGGCCATATGCAGTTTGTCCCCTGGGATTCATCAGTACAAGTTTTGTGTGGATGGGGAATGGCGGCACGATGAGCGGCAACCTACCATAACAGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAGGGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACATGGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGAAGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTTTCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAAGGTCATTGCTCTAGACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTCTTCATGAACAGGGAATTCCTGTGGCACCTCTATGGGATTCATTCAGGGGCCAGTTTGTTGGCCTTTTGAGCCCACTGGATTTTATACTCATATTGAGAGAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCCACCCCTTATGAATCCCTGAGGGAAATTGCTATGAAGATACTGCAAAACGGTGTTTCTACCGTTCCAATTATGTTTTCCTCATCACCAGATGGCTCATATCCACAATTGTTGCATCTTGCTTCCCTTTCTGGAATTTTGAAATGTATTTGTAGATATTTTAAAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTATGCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAATCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAAA ]
[+] EMBL AK102647 [ ATCTAGATTTTGATCTTCCCCTCCTCGCTGCTTCCCCTCGCCCTTCTGACCTGGCGCAGATGTTTTCCCACGGCGCTGATTCCGCCCACGACGCCGGCGCCGTCAGCACCGGTGCCTCCGGCGTCCCCACGCGCTTCGTCTGGCCCTACGGTGGCAAGAGGGTCTACCTCACCGGCTCCTTTACCAGGTGGACAGAACATTTGCCAATGTCTCCTGTTGAAGGTTGTCCCACCGTTTTTCAGGCCATATGCAGTTTGTCCCCTGGGATTCATCAGTACAAGTTTTGTGTGGATGGGGAATGGCGGCACGATGAGCGGCAACCTACCATAACAGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAGGGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACATGGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGAAGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTTTCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAAGGTCATTGCTCTAGACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTCTTCATGAACAGGGAATTCCTGTGGCACCTCTATGGGATTCATTCAGGGGCCAGTTTGTTGGCCTTTTGAGCCCACTGGATTTTATACTCATATTGAGAGAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCCACCCCTTATGAATCCCTGAGGGAAATTGCTATGAAGATACTGCAAAACGGTGTTTCTACCGTTCCAATTATGTTTTCCTCATCACCAGATGGCTCATATCCACAATTGTTGCATCTTGCTTCCCTTTCTGGAATTTTGAAATGTATTTGTAGATATTTTAAAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTATGCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTCTTTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACTGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAAAA ]
[+] EMBL CF302989 [ aggGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAGGGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACATGGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGAAGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTTTCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAAGGTCATTGCTCTAGACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTCTTCATGAACAGGGAATTCCTGTGGCACCTCTATGGGATTCATTCAGGGGCCAGTTTGTTGGCCTTTTGAGCCCACTGGATTTTATACTCATATTGAGAGAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCC ]
[+] EMBL CF325983 [ AAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTATGCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGNGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCC ]
[+] EMBL AU225355 [ gccgcTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACT ]
[+] EMBL CA759437 [ TGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATG ]
[+] EMBL CA757096 [ TGGTGATCCTAATGGCCGTCCATTGGCTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTGTGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTGACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCATTCATCAGGCTCTGCAGCTTGGACAGGATG ]
[-] EMBL CB629262 [ GACCATTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCG CCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAGAAAAAAAAGAAGAGAAACTATTGGATATCTGATGATGTAGTGACTGAGAAGCAGGAGTGGAGTTGTGTAAAACCCTGTACCACCCTGATTTTTATGTCTAAACCGCAGCTTACTCA ]
[-] EMBL CB629264 [ GCAAATTCGCCCCTTTGGATTCTTTAACGGGCAAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTAATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAATATCCCTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTGTGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAACATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGCCATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAGAAAAAAAAGAAGAGAAACTATTGGATATCTGATGATGTAGTGACTGAGAAGCAGGAGTGGAGTTGTGTAAAA CCTGTACCA CGGGATTTTTATGTCTAATCCGCAGCTTACTCAAAAAAAAAAGGA]
[+] EMBL CB664119 [ GATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAGTCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTACAGTCGGCTCCTTG ]
[+] EMBL BM420510 [ ACAGGTTTCTTTTCCCGATAATGCCCAACCAGAGTCTGTAAAGTC TTTTTTTTTTCCCTTGCCCCTTCGTTACC AAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCCAGAAGGATGAATTC ATGTGTTGTTTTTGCTCAACCACCGTTTTTTTGGC GGCAGTGTT CAACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAAAAAAAAA ]
[+] EMBL BM420113 [ CCTTCGTTACC AAATGTCTGGTGATTTTTATTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCTGTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGAAGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTGTTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCCACCATGAAAGGAGAAATTACAGTCGGCTCCTTGCTTGTTAGACAA ]
consensusID : consensus_13470#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 662 fasta sequence
[TTTTTTTTTTTTTTAAAAAATCTGAAGCAGTGTAATATCATTCTTTGACAGTATTTAGTTATTGACCTAGAAGCTTATTTCACATGAATTATAAAGACGACTGGTTCATTAATGGAATGTGGGAGTCTATGCATTTGAACAATGTACCTGCTTCGTAATCCCGATTCTGCTGTATCACTTAGTAACCATGCATCTCAGGGAACTTTGTTTGGGTGACCACAAGAAGTTCAGCCAAGATAGTGATCATGTTGAACTGTTTTTCCCTTAATTGGAAGTGTTCAGTTAGTAAAACCTCCAAAAATTTGAAATCGTATCTTTTGGAAGGGGGACTCTAGAAAATAGAAATAAATATGCTAGTAGTAGCGACTGCATCATGATACTTTATTTTTATGCTGTTTGAATTGTTTCTGCTTCCAGGTAAAGGATTATTAATCCTGACCATGTGATTTGTTACTTGAAACAATTTGTGAGCATATTCCAACAGAGTAGCATTTAATATCTTGTTTATATTGCAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGTGAGTTGTCCACTG]
[+] EMBL CA759438 [TTTTTTTTTTTTTTAAAAAATCTGAAGCAGTGTAATATCATTCTTTGACAGTATTTAGTTATTGACCTAGAAGCTTATTTCACATGAATTATAAAGACGACTGGTTCATTAATGGAATGTGGGAGTCTATGCATTTGAACAATGTACCTGCTTCGTAATCCCGATTCTGCTGTATCACTTAGTAACCATGCATCTCAGGGAACTTTGTTTGGGTGACCACAAGAAGTTCAGCCAAGATAGTGATCATGTTGAACTGTTTTTCCCTTAATTGGAAGTGTTCAGTTAGTAAAACCTCCAAAAATTTGAAATCGTATCTTTTGGAAGGGGGACTCTAGAAAATAGAAATAAATATGCTAGTAGTAGCGACTGCATCATGATACTTTATTTTTATGCTGTTTGAATTGTTTCTGCTTCCAGGTAAAGGATTATTAATCCTGACCATGTGATTTGTTACTTGAAACAATTTGTGAGCATATTCCAACAGAGTAGCATTTAATATCTTGTTTATATTGCAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGCTTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACGAGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGTGAGTTGTCCACTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13470#0 CGCGTTTCCATCCCCATCTCCATCTCCTCCTCCTCGCCGCATTCGCATCTCCCTCCTCTC 60
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 GCCGCCGCCGCCACCGCCACCGCCGCCGCTCCCTTCCTGCCATTACCGCCCGTGCCCCTC 120
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 ACCCCCCTTTGCCCCTCGATCTCTCCCCCCTAGGGTAGGGTAGGGGCTTGCCTCCGATTC 180
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 CGTACGGACACACCCTACCTAGGGTAGGGTAGGGGTAGGGGTAGGGTTGATAGAGAGAGG 240
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 TTCCGGGATGACGGCCGGCGAGGGCTGCGCGGCCCGACGCGGGTGATCCGCTCTCACGCG 300
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 GGGAGCACCTCTCGCGCGCGCTTGCTTCACGTGGGGGATCCCGTCGCGGCTATCCCTCCT 360
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 CTCCTCTCTTCTTCCCCCTTCTAGTCTAGTTTAGGGTTTTCTATCTATCCATCTAGATTT 420
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 TGATCTTCCCCTCCTCGCTGCTTCCCCTCGCCCTTCTGACCTGGCGCAGATGTTTTCCCA 480
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 CGGCGCTGATTCCGCCCACGACGCCGGCGCCGTCAGCACCGGTGCCTCCGGCGTCCCCAC 540
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 GCGCTTCGTCTGGCCCTACGGTGGCAAGAGGGTCTACCTCACCGGCTCCTTTACCAGGTG 600
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 GACAGAACATTTGCCAATGTCTCCTGTTGAAGGTTGTCCCACCGTTTTTCAGGCCATATG 660
consensus_13470#1 --------------TTTTTTTTTTTTTTAAAAAATCTGAAGCAGTGT--AATATCATTCT 44
* * * * ** ** * * * ** * * ***
consensus_13470#0 CAGTTTGTCCCCTGGGATTCATCAGTACAAGTTTTGTGTGGATGGGGAATGGCGGCACGA 720
consensus_13470#1 TTGACAGTATTTAGTTATTGACC--TAGAAGCTTATTTCACATGAATTATA-----AAGA 97
* ** * *** * * ** *** ** * *** ** * **
consensus_13470#0 TGAGCGGCAACCTACCATAACAGGAGACTATGGTGTGGTTAACACTTTATGCTTGACTAG 780
consensus_13470#1 CGACTGGTTCATTAATGGAATGTGGGAGTCTA-TGCATTTGA-ACAATGTACCTGCTTCG 155
** ** ** ** * ** * * ** ** * ** * * * ** * *
consensus_13470#0 GGACTTTGACCAGATAAATACAATATTGAGCCCTAGTACACCTGGAAGTAGGATGAACAT 840
consensus_13470#1 TAATCCCGATT---CTGCTGTATCACTTAGTAACCATGCATCTCAGGGAACTTTG--TTT 210
* ** * * * * ** * ** ** * * ** *
consensus_13470#0 GGATGTGGACAACGACAATTTTCAACGTACTGTTTCTTTGTCTGATGGCATTATTCAGGA 900
consensus_13470#1 GGGTGACCACAAGAAGTTCAGCCAAGATAGTGATCAT--GTTGAACTGTTTTTCCCTTAA 268
** ** **** * *** ** ** * * ** * * ** * *
consensus_13470#0 AGGTCCTCAGAGAATTTCAGAGGCAGCTATACAGATCTCTAGGTGTCGTGTAGCGGATTT 960
consensus_13470#1 ------TTGGAAGTGTTCAG------TTAGTAAAACCTCCAAAAATTTGAAATCGTATCT 316
* ** ***** ** * * *** * * * ** ** *
consensus_13470#0 TCTGAATGGACAAACTGGGTATGATTTACTCCCAGATTCTGGCAA-GGTCATTGCTCTAG 1019
consensus_13470#1 TTTGGAAGGG-GGACTCTAGAAAATAGAAATAAATATGCTAGTAGTAGCGACTGCATC-- 373
* ** * ** *** * ** * * ** ** * * * * ***
consensus_13470#0 ACGTTAATTTGCCTGTGAAGCAATCTTTTCATATTC-TTCATGAACAGGGAATTCCTGTG 1078
consensus_13470#1 ATGATACTTTATTTTTATGCTGTTTGAATTGTTTCTGCTTCCAGGTAAAGGATTATTA-A 432
* * ** *** * * * * * * * * * *** *
consensus_13470#0 GCACCTCTATGGGATTCATT-CAGGGGCCAGTTTGTTGGCCT-TTTGAGCCCACTGGATT 1136
consensus_13470#1 TCCTGACCATGTGATTTGTTACTTGAAACAATTTGTGAGCATATTCCAACAGAGTAGCAT 492
* * *** **** ** * * ** ***** ** * ** * * * * * *
consensus_13470#0 TTATACTCATATTGAGAG---AGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGC 1193
consensus_13470#1 TTAATATCTTGTTTATATTGCAGCTGGAAACTCATGGCTCCAATCTGACAGAAGAGCAGC 552
*** ** * ** * * ***************************************
consensus_13470#0 TTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACG 1253
consensus_13470#1 TTGAAACACATACTATATCTGCGTGGAAGGAGGCCAAGCGTCAAACTTATGCCAGAAACG 612
************************************************************
consensus_13470#0 AGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGCCACCCCTTATGAATCCCTGAGGG 1313
consensus_13470#1 AGGGTTCTTGGAGGGCAAATCACCATTTAGTTCATGTGAGTTGTCCACTG---------- 662
************************************ * *
consensus_13470#0 AAATTGCTATGAAGATACTGCAAAACGGTGTTTCTACCGTTCCAATTATGTTTTCCTCAT 1373
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 CACCAGATGGCTCATATCCACAATTGTTGCATCTTGCTTCCCTTTCTGGAATTTTGAAAT 1433
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 GTATTTGTAGATATTTTAAAAATTCTCAAGGTAATTTACCTATTTTGAGCCAACCTGTAT 1493
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 GCACAATTCCTCTGGGTACCTGGGTTCCAAAAATTGGTGATCCTAATGGCCGTCCATTGG 1553
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 CTATGTTGCGGCCTAACACATCTCTTAGCGCTGCCCTGAATTTGCTGGTTCAAGCTGGTG 1613
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 TGAGCTCAATACCAATTGTGGATGACAATGACTCACTGCTTGACACATATTCCAGAAGTG 1673
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 ACATCACAGCTCTTGCAAAAGACAAGGTGTACACACACATTCGCCTAGATGAGATGACCA 1733
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 TTCATCAGGCTCTGCAGCTTGGACAGGATGCAAATTCGCCCTTTGGATTCTTTAACGGGC 1793
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 AAAGATGTCAGATGTGTCTCCGGTCTGACACTTTGTTGAAAGTGATGGAGCGATTAGCTA 1853
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 ATCCTGGGGTGCGCCGTGTTTTCATTGTGGAAGCTGGTAGCAAACGTGTGGAGGGCATAA 1913
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 TATCACTGAGTGATATTTTCAAGTTCTTGCTGAGCTAAGTGAAAATGCCCGAGCCATCTG 1973
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 TGTTTTGTTCTCACAACTGCCGGAGTTAACAATAGCAGAAAAAAATTGTGAATCTCCAAC 2033
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 ATCGATCTCTCTGGCTTTTGGATCAGACAGGTGTCTTTTCCCGATAATGGCCAACCAGAG 2093
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 TCTGTAAAGTCTTTTTTTTTTCCCTTGCCCCTTCGTTACCAAAATGTCTGGTGATTTTTA 2153
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 TTTATTGGATTGTTTTGCTGCTTGCTCGGTTTCTGAGCCCCCCAAGGAGTTAGTAGCTCT 2213
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 GTTGAAAGGGTGGGATGGGCGCTTAGAGACATATTTTAGCATGAATCATCATCACAGGGA 2273
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 AGTAAGAATTGAAGGAAAGAGGGGATGCTCTGAAGCAAGAAGGATGAATTCAATGTGTTG 2333
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 TTTTTGCTCAACAACCGTTTTTTTGGCGGGCAGTGTTGCAACCATGAAAGGAGAAATTAC 2393
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 AGTCGGCTCCTTGCTTGTTAGACAAAAAAAAAAAAAAAAAAAGAAGAGAAACTATTGGAT 2453
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 ATCTGATGATGTAGTGACTGAGAAGCAGGAGTGGAGTTGTGTAAAACCCTGTACCACCCT 2513
consensus_13470#1 ------------------------------------------------------------
consensus_13470#0 GATTTTTATGTCTAAACCGCAGCTTACTCAAAAAAAAAAGGA 2555
consensus_13470#1 ------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||