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Oryza sativa
cluster # 13472 cluster # 13472       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13472#0 length = 952 sequences # 11  
consensus_13472#1 length = 524 sequences # 1  
consensus_13472#2 length = 389 sequences # 1  

consensusID : consensus_13472#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 952
fasta sequence
                              [TTCGCGAGATTACTAGGGAGCGAATGTTCGCTCCATTGCTGTTCCCAAACCCTCCAAAGTCCAAACCCCTCTCCTCCTCCTCTCCAACGCCATAAACCACAGAGAGGGGGAGAAGAAGTGGAAGCGTGAGCCGCCGCAGCCGCACGCGATGCAGCAGCAGCCGATGCCGATGCCCGCGCAGGCGCCGCCGACGGCCGGAATCACCACCGAGCAGATCCAAAAGTATCTGGATGAAAACAAGCAGCTTATTTTGGCTATTTTGGAAAATCAGAATCTGGGAAAGTTGGCAGAATGTGCTCAGTATCAAGCGCAGCTT-CAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACCGCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTA-GGGGGGCAATACATG-TCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGATGCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGTTATG-AGGCCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGGAGCAGATCACCAGAACGCTGGCGGGGCCACC-TCGGAGCCTTCCGAGAGCCACAGGAGCACCGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCC-TTTCAGGTCGCGACGAAAAAC--AAAAAAAAAACATGTAGGCAACG-ACT-GAGTGG--AGAGGGGATCATTCCTGTGCCCTT--GAACGGT--GAGTGGCCGTGATCTTCGCC-TGA-TGATGGTC-AGTGGTTGTTACATTTACCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAGATTGCTGCAAGGATTTGTGCTTTGGTTTTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF309605             [TTCGCGAGATTACTAGGGAGCGAATGTTCGCTCCATTGCTGTTCCCAAACCCTCCAAAGTCCAAACCCCTCTCCTCCTCCTCTCCAACGCCATAAACCACAGAGAGGGGGAGAAGAAGTGGAAGCGTGAGCCGCCGCAGCCGCACGCGATGCAGCAGCAGCCGATGCCGATGCCCGCGCAGGCGCCGCCGACGGCCGGAATCACCACCGAGCAGATCCAAAAGTATCTGGATGAAAACAAGCAGCTTATTTTGGCTATTTTGGAAAATCAGAATCTGGGAAAGTTGGCAGAATGTGCTCAGTATCAAGCGCAGCTT CAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACCGCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGT CATCGCCGGGGTTAGGGGGGGCAATACATGTTCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGATGCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGTTATG AGGCCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGGA                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF281360             [       GATTACTAGGGAGCGAATGTTCGCTCCATTGCTGTTCCCAAACCCTCCAAAGTCCAAACCCCTCTCCTCCTCCTCTCCAACGCCATAAACCACAGAGAGGGGGAGAAGAAGTGGAAGCGTGAGCCGCCGCAGCCGCACGCGATGCAGCAGCAGCCGATGCCGATGCCCGCGCAGGCGCCGCCGACGGCCGGAATCACCACCGAGCAGATCCAAAAGTATCTGGATGAAGACAAGCAGCTTATTTTGGCTATTTTGGAAAATCAGAATCTGGGAAAGTTGGCAGAATGTGCTCAGTATCAAGCGCAGCTT CAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACCGCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTA GGGGGGCAATACATG TCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGATGCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGTTATG AGGCCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGGAGCAGATCACCAGAACGCTGGCGGGGCCACC TCGGAGCCTTCCGAGAGCCACAG                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU068624             [                GGAGCGAATGTTCGCTCCATTGCTGTTCCCAAACCCTCCAAAGTCCAAACCCCTCTCCTCCTCCTCTCCAACGCCATAAACCACAGAGAGGGGGAGAAGAAGTGGAAGCGTGA CCGCCGCAGCCGCACGCGATGCAGCAGCAGCCGATGCCGATGCCCGCGCAGGCGCCGCCGACGGCCGGAATCACCACCGAGCAGATCCAAAAGTATCTGGATGAAAACAAGCAGCTTATTTTGGCTATTTTGGAAAATCAGAATCTGGGAAAGTTGGCAGAATGTGCTCAGTATCAAGCGCA NTT CAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACCGCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTA GGGGGGCAATACATG TCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGATGCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGTTATG AGGCCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGGA CAGATCACCAGAACGCTGGCGGGGCCACCTTCGGAG CTTCCGAGAGCCACANGAGCACCGGCACCGAAAATGACGGTGGAA CGACTTCGGCGATCAATCCTAAGGG TAAGTTGGCCTTTTCAGGTCGCGACGAAAAACA AAAAAAAAAACATNTAGGCAACGAANTNAATTGGAAAAAGGGGATCATTCCTGTGCCCTTNAAAACGGTTAAATTGNCCGTNATTTTCGCCTTGATTNATGGTCAANTGGTT                                                                                                              ]
[+] EMBL C28394               [                       tntacgGCTCCATTCCTGTTCCCAAACCCTCCAAAGTCCAAACCCCTCTCCTCCTCCTCTCCAACGCCATAAACCACAGAGAGGGGGAGAAGAAGTGGAAGCNTGA CCGCCGCAGCCGCACGCAATGCAGCAGCAGCCGATGCCGATGCCCGCNCAGGCGCCGCCGACGGCCGGANTCACCACCGAGCAGATCCAAAAGTATCTGGATGAAAACAAGCAGCTTATTTTGGCTATTTTGGAAAATNAGAATCTGGGAAAGTTGGCAGAATGTGCTCAGTATCAAGCGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK105366             [                                                       AAAGTCCAAACCCCTCTCCTCCTCCTCTCCAACGCCATAAACCACAGAGAGGGGGAGAAGAAGTGGAAGCGTGAGCCGCCGCAGCCGCACGCGATGCAGCAGCAGCCGATGCCGATGCCCGCGCAGGCGCCGCCGACGGCCGGAATCACCACCGAGCAGATCCAAAAGTATCTGGATGAAAACAAGCAGCTTATTTTGGCTATTTTGGAAAATCAGAATCTGGGAAAGTTGGCAGAATGTGCTCAGTATCAAGCGCAGCTT CAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACCGCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTA GGGGGGCAATACATG TCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGATGCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGTTATG AGGCCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGGAGCAGATCACCAGAACGCTGGCGGGGCCACC TCGGAGCCTTCCGAGAGCCACAGGAGCACCGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCC TTTCAGGTCGCGACGAAAAAC  AAAAAAAAAACATGTAGGCAACG ACT GAGTGG  AGAGGGGATCATTCCTGTGCCCTT  GAACGGT  GAGTGGCCGTGATCTTCGCC TGA TGATGGTC AGTGGTTGTTACATTTACCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGT                                                                ]
[+] EMBL C27726               [                                                                 CCCCTCTCCTCCTCCTCTCCAACGCCATAAACCACAGAGAGGGGGAGAAGAAGTGGAAGCGTGA NCGCCGCAGCCGCACGCAATGCAGCAGCAGCCGATGCCGATGCCCGCGCAGGCGCCGCCGACGGCCGGAATCACCACCGAGCAGATCCAAAAGTATCTGGATGAAAACAAGCAGCTTATTTTGGCTATTTTGGAAAATCAGAATCTGGGAAAGTTGGCAGAATGTGCTCAGTATCAAGCGCA NTT CAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACCGCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTA GGGGGGCAATACATG TCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGNCCCAGCAGATGCAGGAGCAGCAG TGCAGCAACAGCAAGCCCAG TGCTCTt                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CF281361             [                                                                                                                                                                                                                          AAAAGTATTTGGATGAAGACAAGCAGCTTATTTTGGGTATTTTGGAAAATCAGAATCTGGGAAAGTTGGCAGAATGTGCTCAGTATCAAGCGCAGCTT CAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACCGCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTA GGGGGGCAATACATG TCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGATGCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGTTAAGAAGACCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGAAAAATTAAACCGCGGAGCAGATCACCAGAACGCTGGCGGGGCCACC TCGGAGCCTTCCGAGAGCCACAGGAGCACCGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCC TT                                                                                                                                                                                                                                                   ]
[+] EMBL AU068623             [                                                                                                                                                                                                                                            ACAAGCAGCTTATTTTGGCTATTTTGGAAAATCAGAATCTGGGAAATTTGGCAGAATGTGCTCAGTATCAAGCGCAGCTT CAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACCGCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTA GGGGGGCAATACATG TCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGATGCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGTTATG AGGCCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGGAGCAGATCACCAGAACGCTGGCGGGGCCACC TCGGAGCCTTCCGAGAGCCACAGGAGCACCGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCC TTTCAGGTCGCGACGAAAAAC  AAAAAAAAAACATGTAGGCAACG ACT GAGTGG  AGAGGGGATCATTCCTGTGCCCTT  GAACGGT  GAGTGGCCGTGATCTTCGCC TGA TGATGGTC AGTGGTTGTTACATTTACCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAGATTGCTGCAAGGATTTGTGCTTTGGTTTTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU068846             [                                                                                                                                                                                                                                                                                                                  AGCGCA CTTNCAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACCGCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTA GGGGGGCAATACATG TCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGATGCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGTTATG AGGCCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGGAGCAGATCACCAGAACGCTGGCGGGGCCACC TCGGAGCCTTCCGAGAGCCACAGGAGCACCGGCACCGAAAATGACGGTGGAAG                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU092926             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGTTATG AGGCNTGGCGTTGTGAATGGNATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGGAGCAGATCACCAGAACGCTGGCGGGGCCACC TCGGAGCCTTCCGAGAGCCACAGGAGCACCGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGG C TTTCAGGTCGCGACGAAAAACAAAAAAAAAAAACATGTAGGCAACG ACT GAGTGG  AGAGGGGATCATTCCTGTGCCCTT  GAACGGT  GAGTGGCCGTGATCTTCGCC TGA TGATGGTC AGTGGTTGTTACATTTACCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAaaaaa                                                          ]
[+] EMBL AU068847             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGAANCGACTTCGGCGNTNAATCCTAAGGGCTAAGTTGG C TTTCAGGTCGCGNCGNAAANC  AAAAAAAAAACATGTAGGCAACG ACT GAGTGG  AGAGGGGATCATTCCTGTGCCCTT  GAACGGT  GAGTGGCCGTGATCTTCGCC TGA TGATGGTC AGTGGTTGTTACATTTNCCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAGATTGCTGCAAGGATTTGTGCTTTGGTTTTGACTCAGAAAAAAAAAAAAAAAAAAAAAAA   ]


>consensus_13472#0 TTCGCGAGATTACTAGGGAGCGAATGTTCGCTCCATTGCTGTTCCCAAACCCTCCAAAGT CCAAACCCCTCTCCTCCTCCTCTCCAACGCCATAAACCACAGAGAGGGGGAGAAGAAGTG GAAGCGTGAGCCGCCGCAGCCGCACGCGATGCAGCAGCAGCCGATGCCGATGCCCGCGCA GGCGCCGCCGACGGCCGGAATCACCACCGAGCAGATCCAAAAGTATCTGGATGAAAACAA GCAGCTTATTTTGGCTATTTTGGAAAATCAGAATCTGGGAAAGTTGGCAGAATGTGCTCA GTATCAAGCGCAGCTTCAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACC GCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTAGGGGG GCAATACATGTCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGAT GCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGT TATGAGGCCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGG AGCAGATCACCAGAACGCTGGCGGGGCCACCTCGGAGCCTTCCGAGAGCCACAGGAGCAC CGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCC TTTCAGGTCGCGACGAAAAACAAAAAAAAAACATGTAGGCAACGACTGAGTGGAGAGGGG ATCATTCCTGTGCCCTTGAACGGTGAGTGGCCGTGATCTTCGCCTGATGATGGTCAGTGG TTGTTACATTTACCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAGATTGCTGCAA GGATTTGTGCTTTGGTTTTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13472#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 524
fasta sequence
                              [AACGCTGGCGGGGCCACCTCGGAGCCTTCCGAGAGCCACAGGAGCACCGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCCTTTCAGGTCGCGACGAAAAACAAAAAAAAAACATGTAGGCAACGACTGAGTGGAGAGGGGATCATTCCTGTGCCCTTGAACGGTGAGTGGCCGTGATCTTCGCCTGATGATGGTCAGTGGTTGTTACATTTACCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAGATTGCTGCAAGGATTTGTGCTTTGGTTTTGACTCAGAATTAGGCTTGTAGCCTCTTCTGATCATGGTTCTTGGCCTCGTCCGATACTGTTGGCTGCTGGAATTTGTTGCCGGCTGGAGGAATAGACGGCGTTAGCACCTGGTGTTTTGTGGCTGAAGGTTGAGATTAGGAGGAAATTGCTATTGCATATACAGGAATAATTATACTCCAATACAGTTAATTGTACGGTACAAGGTACAGATAAAAAA]

[-] EMBL CF309606             [AACGCTGGCGGGGCCACCTCGGAGCCTTCCGAGAGCCACAGGAGCACCGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCCTTTCAGGTCGCGACGAAAAACAAAAAAAAAACATGTAGGCAACGACTGAGTGGAGAGGGGATCATTCCTGTGCCCTTGAACGGTGAGTGGCCGTGATCTTCGCCTGATGATGGTCAGTGGTTGTTACATTTACCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAGATTGCTGCAAGGATTTGTGCTTTGGTTTTGACTCAGAATTAGGCTTGTAGCCTCTTCTGATCATGGTTCTTGGCCTCGTCCGATACTGTTGGCTGCTGGAATTTGTTGCCGGCTGGAGGAATAGACGGCGTTAGCACCTGGTGTTTTGTGGCTGAAGGTTGAGATTAGGAGGAAATTGCTATTGCATATACAGGAATAATTATACTCCAATACAGTTAATTGTACGGTACAAGGTACAGATAAAAAA]


>consensus_13472#1 AACGCTGGCGGGGCCACCTCGGAGCCTTCCGAGAGCCACAGGAGCACCGGCACCGAAAAT GACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCCTTTCAGGTCGCGA CGAAAAACAAAAAAAAAACATGTAGGCAACGACTGAGTGGAGAGGGGATCATTCCTGTGC CCTTGAACGGTGAGTGGCCGTGATCTTCGCCTGATGATGGTCAGTGGTTGTTACATTTAC CTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAGATTGCTGCAAGGATTTGTGCTTT GGTTTTGACTCAGAATTAGGCTTGTAGCCTCTTCTGATCATGGTTCTTGGCCTCGTCCGA TACTGTTGGCTGCTGGAATTTGTTGCCGGCTGGAGGAATAGACGGCGTTAGCACCTGGTG TTTTGTGGCTGAAGGTTGAGATTAGGAGGAAATTGCTATTGCATATACAGGAATAATTAT ACTCCAATACAGTTAATTGTACGGTACAAGGTACAGATAAAAAA



consensusID : consensus_13472#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 389
fasta sequence
                              [NCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCCTTTCAGGTCGCGACGAAACNCAAAAAAAAAACATGTAGGCAACGTCTNAGTGGAAAGGGGATCATTCCTGTGCCCTTGAACGGTGAGTGGCCGTGATNTTCGCCTGATNATGGTCAGTGGTTGTTACATTTACCTGTGTTTTTNANACTTTCAGTNTGGTACAAACGTANATTGCTGCAAGGATTTGTGCTTTGGTTTTGACTCANAATTAGGCTTGTANCCTCTTCTGATCATGGTTCTTGGCCTCGTCCGATACTGTTGGCTGCTGGAATTTGTTGCCGGCTGGAGGAATAGACGGCGTTAGCACCTGGTGTTTTGTGGCTNAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU092645             [NCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCCTTTCAGGTCGCGACGAAACNCAAAAAAAAAACATGTAGGCAACGTCTNAGTGGAAAGGGGATCATTCCTGTGCCCTTGAACGGTGAGTGGCCGTGATNTTCGCCTGATNATGGTCAGTGGTTGTTACATTTACCTGTGTTTTTNANACTTTCAGTNTGGTACAAACGTANATTGCTGCAAGGATTTGTGCTTTGGTTTTGACTCANAATTAGGCTTGTANCCTCTTCTGATCATGGTTCTTGGCCTCGTCCGATACTGTTGGCTGCTGGAATTTGTTGCCGGCTGGAGGAATAGACGGCGTTAGCACCTGGTGTTTTGTGGCTNAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13472#2 NCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCCTTTCAGGTCGCGACGAAACNCAA AAAAAAAACATGTAGGCAACGTCTNAGTGGAAAGGGGATCATTCCTGTGCCCTTGAACGG TGAGTGGCCGTGATNTTCGCCTGATNATGGTCAGTGGTTGTTACATTTACCTGTGTTTTT NANACTTTCAGTNTGGTACAAACGTANATTGCTGCAAGGATTTGTGCTTTGGTTTTGACT CANAATTAGGCTTGTANCCTCTTCTGATCATGGTTCTTGGCCTCGTCCGATACTGTTGGC TGCTGGAATTTGTTGCCGGCTGGAGGAATAGACGGCGTTAGCACCTGGTGTTTTGTGGCT NAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      TTCGCGAGATTACTAGGGAGCGAATGTTCGCTCCATTGCTGTTCCCAAACCCTCCAAAGT 60
                                                                                   

consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      CCAAACCCCTCTCCTCCTCCTCTCCAACGCCATAAACCACAGAGAGGGGGAGAAGAAGTG 120
                                                                                   

consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      GAAGCGTGAGCCGCCGCAGCCGCACGCGATGCAGCAGCAGCCGATGCCGATGCCCGCGCA 180
                                                                                   

consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      GGCGCCGCCGACGGCCGGAATCACCACCGAGCAGATCCAAAAGTATCTGGATGAAAACAA 240
                                                                                   

consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      GCAGCTTATTTTGGCTATTTTGGAAAATCAGAATCTGGGAAAGTTGGCAGAATGTGCTCA 300
                                                                                   

consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      GTATCAAGCGCAGCTTCAGAAGAATCTCTTGTACTTGGCTGCAATTGCTGATACTCAACC 360
                                                                                   

consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      GCAGACCACTATAAGCCGTCCCCAGATGGTGCCGCATGGTGCATCGCCGGGGTTAGGGGG 420
                                                                                   

consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      GCAATACATGTCGCAGGTGCCAATGTTCCCCCCCAGGACCCCTCTAACGCCCCAGCAGAT 480
                                                                                   

consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      GCAGGAGCAGCAGCTGCAGCAACAGCAAGCCCAGCTGCTCTCGTTCGGCGGTCAGATGGT 540
                                                                                   

consensus_13472#1      ------------------------------------------------------------
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      TATGAGGCCTGGCGTTGTGAATGGCATTCCTCAGCTTCTGCAAGGCGAAATGCACCGCGG 600
                                                                                   

consensus_13472#1      -------------AACGCTGGCGGGGCCACCTCGGAGCCTTCCGAGAGCCACAGGAGCAC 47
consensus_13472#2      ------------------------------------------------------------
consensus_13472#0      AGCAGATCACCAGAACGCTGGCGGGGCCACCTCGGAGCCTTCCGAGAGCCACAGGAGCAC 660
                                                                                   

consensus_13472#1      CGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCC 107
consensus_13472#2      -----------------------NCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCC 37
consensus_13472#0      CGGCACCGAAAATGACGGTGGAAGCGACTTCGGCGATCAATCCTAAGGGCTAAGTTGGCC 720
                                               ************************************

consensus_13472#1      TTTCAGGTCGCGACGAAAAACAAAAAAAAAACATGTAGGCAACGACTGAGTGGAGAGGGG 167
consensus_13472#2      TTTCAGGTCGCGACGAAACNCAAAAAAAAAACATGTAGGCAACGTCTNAGTGGAAAGGGG 97
consensus_13472#0      TTTCAGGTCGCGACGAAAAACAAAAAAAAAACATGTAGGCAACGACTGAGTGGAGAGGGG 780
                       ******************  ************************ ** ****** *****

consensus_13472#1      ATCATTCCTGTGCCCTTGAACGGTGAGTGGCCGTGATCTTCGCCTGATGATGGTCAGTGG 227
consensus_13472#2      ATCATTCCTGTGCCCTTGAACGGTGAGTGGCCGTGATNTTCGCCTGATNATGGTCAGTGG 157
consensus_13472#0      ATCATTCCTGTGCCCTTGAACGGTGAGTGGCCGTGATCTTCGCCTGATGATGGTCAGTGG 840
                       ************************************* ********** ***********

consensus_13472#1      TTGTTACATTTACCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAGATTGCTGCAA 287
consensus_13472#2      TTGTTACATTTACCTGTGTTTTTNANACTTTCAGTNTGGTACAAACGTANATTGCTGCAA 217
consensus_13472#0      TTGTTACATTTACCTGTGTTTTTGAGACTTTCAGTCTGGTACAAACGTAGATTGCTGCAA 900
                       *********************** * ********* ************* **********

consensus_13472#1      GGATTTGTGCTTTGGTTTTGACTCAGAATTAGGCTTGTAGCCTCTTCTGATCATGGTTCT 347
consensus_13472#2      GGATTTGTGCTTTGGTTTTGACTCANAATTAGGCTTGTANCCTCTTCTGATCATGGTTCT 277
consensus_13472#0      GGATTTGTGCTTTGGTTTTGACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------- 952
                       ************************* **  *       *          *          

consensus_13472#1      TGGCCTCGTCCGATACTGTTGGCTGCTGGAATTTGTTGCCGGCTGGAGGAATAGACGGCG 407
consensus_13472#2      TGGCCTCGTCCGATACTGTTGGCTGCTGGAATTTGTTGCCGGCTGGAGGAATAGACGGCG 337
consensus_13472#0      ------------------------------------------------------------
                                                                                   

consensus_13472#1      TTAGCACCTGGTGTTTTGTGGCTGAAGGTTGAGATTAGGAGGAAATTGCTATTGCATATA 467
consensus_13472#2      TTAGCACCTGGTGTTTTGTGGCTNAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------- 389
consensus_13472#0      ------------------------------------------------------------
                                                                                   

consensus_13472#1      CAGGAATAATTATACTCCAATACAGTTAATTGTACGGTACAAGGTACAGATAAAAAA 524
consensus_13472#2      ---------------------------------------------------------
consensus_13472#0      ---------------------------------------------------------
                                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)