cluster # 1348

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Oryza sativa
cluster # 1348 cluster # 1348 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1348#0 length = 547 sequences # 2

consensusID : consensus_1348#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 547
fasta sequence

                              [TGGGTCTCTCATGGCCTCATGGTGGAGAGCGACGTGGCCTCACCTAGCTATAGTGCTGTACAGTGTACACACGCGCGGTCCAATCCCCACCCCGACGCGGTGATGCACGCATCTGGTGGCAATAGACGTAGCATGAACCAGCAATATGGCACCACCAGGGTGGTTGCGGTGCAATGGCGTNGCTAGTATGGTTGTGGTTGTACTGTACTACTGTNGTCGGTGTGGCCCTAGATGTTCTGTGACTGCCGCCTTTGTGTTTGAGTTAATGTGGCACCGACGAGCTTGAGGAATGCTCTTTAATTAGCCGAACAGTAGTACCTCA-CCACGGGTGCATGTGATTTACGAAATGTAAATATGTAATGCACGGAAACAGAAAATTGCGTATTGAAGACTATTGTCAGAGAATATGAAAAAGCTCCAGTTATTTTCTCCTATCTATATACTGCCTAACCTATTACTCCTTGAGCGTTTTCTACAAGCAGGCAAAAAAATGCTATTTCTGAAAGCAAACCCTGATATGCATTGCACCGCCTTACATTGAACCGAC]

[+] EMBL CF323321             [TGGGTCTCTCATGGCCTCATGGTGGAGAGCGACGTGGCCTCACCTAGCTATAGTGCTGTACAGTGTACACACGCGCGGTCCAATCCCCACCCCGACGCGGTGATGCACGCATCTGGTGGCAATAGACGTAGCATGAACCAGCAATATGGCACCACCAGGGTGGTTGCGGTGCAATGGCGTNGCTAGTATGGTTGTGGTTGTACTGTACTACTGTNGTCGGTGTGGCCCTAGATGTTCTGTGACTGCCGCCTTTGTGTTTGAGTTAATGTGGCACCGACGAGCTTGAGGAATGCTCTTTAATTAGCCGAACAGTAGTACCTCA CCACGGGTGCATGTGATTTACGAAATGTAAATATGTAATGCACGGAAACAGAAAATTGCGTATTGAAGACTATTGTCAGAGAATATGAAAAAGCTCCAGTTATTTTCTCCTATCTATATACTGCCTAACCTATTACTCCTTGAGCGTTTTCTACAAGCAGGCAAAAAAATGCTATTTCTGAAAGCAAACCCTGATATGCATTGCACCGCCTTACATTGAACCGAC]
[+] EMBL AU062683             [                                                                                                                                             CAATATGGCACCACCAGGGT GTTGCGGTGCAATGGCGT GCTAGTATGGTTGTGGTTGTACTGTACTACTGTN TCGGTGTGGCCCTAGATGTTCTGTGACTGCCGCCTTTNTGTTTGAGTTAATGTGGCACCGACGAGCTTGAGGAATGCTCTTTAATTAGCCGAACAGTAGTACCTCACCCACG                                                                                                                                                                                                                            ]




>consensus_1348#0
TGGGTCTCTCATGGCCTCATGGTGGAGAGCGACGTGGCCTCACCTAGCTATAGTGCTGTA
CAGTGTACACACGCGCGGTCCAATCCCCACCCCGACGCGGTGATGCACGCATCTGGTGGC
AATAGACGTAGCATGAACCAGCAATATGGCACCACCAGGGTGGTTGCGGTGCAATGGCGT
NGCTAGTATGGTTGTGGTTGTACTGTACTACTGTNGTCGGTGTGGCCCTAGATGTTCTGT
GACTGCCGCCTTTGTGTTTGAGTTAATGTGGCACCGACGAGCTTGAGGAATGCTCTTTAA
TTAGCCGAACAGTAGTACCTCACCACGGGTGCATGTGATTTACGAAATGTAAATATGTAA
TGCACGGAAACAGAAAATTGCGTATTGAAGACTATTGTCAGAGAATATGAAAAAGCTCCA
GTTATTTTCTCCTATCTATATACTGCCTAACCTATTACTCCTTGAGCGTTTTCTACAAGC
AGGCAAAAAAATGCTATTTCTGAAAGCAAACCCTGATATGCATTGCACCGCCTTACATTG
AACCGAC

clustalw multiple alignements is not computed in this case