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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1349 cluster # 1349       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1349#0 length = 945 sequences # 2  

consensusID : consensus_1349#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 945
fasta sequence
                              [GCCGCCGACGCCGCACTTCCCCTCGCGCCGCGCCGCTGTTCTCTTCTCCGGCCGCGCTTCTGCCGCGCGGAGAGGTTCGCCGCCTCGATCGACATCCGTCCCCCCTCCAGATGGCGTCCCGGGGCCGCGGGAGAGGCCGGGGGAGGCGGGGAGGAGGGTACGGCTTCGACCACCCGGCCAAGCACACCCCCCACGAGGATTTCCCGGACATCACCCTGCCGGAGATGACGTGCGCCAGGGCGACCATGGAGGAGAAGGCTCTGATACAGTCCACCTTGAAATTTGAGGATTTCTGGAAGACTTCTTGCTACCACCTGGAGGAGGATGTCCCCAAGAAAAAGAATGATGATAAAGAGATTGAAAGGTATTCTGATAGGAAACGTAAGACACATTCCAAACGTGAAGCTCTTGCGTCATATCTTATACTAACTCCTGCAAATTTCCCTGTGGAACTAGTGCAAGGTTCTAAGCGAGGACAGCCAAGCAGTAAGAAGCTGCGTTGGGATAGAAGCTCAGATGATCAGGCATTTGAAGTTTTTGAGAAGCTTGAAGAGAAGCACAAGGACGGAGACAAGAAAACAGAAAAGGATGGGGATGATGAGGATGAACATGAAGAGGAAGAAGTAGAAGAGGAGAATTCAGATGATGATTATAATCAGAATATCGAGTTTGATGACGACGATGATGACTGGAACCAAGAGGAGGAAGCACATGAAGACTACTATGATTAGAGCCACTGTCTACAAAAGTTGTCCAATATCAAGTTTTGTTTCTGTTCATTTTTCTCTATAGTACTTGCTAGGTGATTAGAGGTAAATGTTTTCCTGTCAATATGCGGTATCAGAAACTAGGATCTGTCTGAATTCTGAAATATGGAGTAGGCTGCTGCTACTGTTCCTATTGTACTGAAGACTGGCAAGAATTGATTTATATGTTCTGGGATGT]

[+] EMBL AK102547             [GCCGCCGACGCCGCACTTCCCCTCGCGCCGCGCCGCTGTTCTCTTCTCCGGCCGCGCTTCTGCCGCGCGGAGAGGTTCGCCGCCTCGATCGACATCCGTCCCCCCTCCAGATGGCGTCCCGGGGCCGCGGGAGAGGCCGGGGGAGGCGGGGAGGAGGGTACGGCTTCGACCACCCGGCCAAGCACACCCCCCACGAGGATTTCCCGGACATCACCCTGCCGGAGATGACGTGCGCCAGGGCGACCATGGAGGAGAAGGCTCTGATACAGTCCACCTTGAAATTTGAGGATTTCTGGAAGACTTCTTGCTACCACCTGGAGGAGGATGTCCCCAAGAAAAAGAATGATGATAAAGAGATTGAAAGGTATTCTGATAGGAAACGTAAGACACATTCCAAACGTGAAGCTCTTGCGTCATATCTTATACTAACTCCTGCAAATTTCCCTGTGGAACTAGTGCAAGGTTCTAAGCGAGGACAGCCAAGCAGTAAGAAGCTGCGTTGGGATAGAAGCTCAGATGATCAGGCATTTGAAGTTTTTGAGAAGCTTGAAGAGAAGCACAAGGACGGAGACAAGAAAACAGAAAAGGATGGGGATGATGAGGATGAACATGAAGAGGAAGAAGTAGAAGAGGAGAATTCAGATGATGATTATAATCAGAATATCGAGTTTGATGACGACGATGATGACTGGAACCAAGAGGAGGAAGCACATGAAGACTACTATGATTAGAGCCACTGTCTACAAAAGTTGTCCAATATCAAGTTTTGTTTCTGTTCATTTTTCTCTATAGTACTTGCTAGGTGATTAGAGGTAAATGTTTTCCTGTCAATATGCGGTATCAGAAACTAGGATCTGTCTGAATTCTGAAATATGGAGTAGGCTGCTGCTACTGTTCCTATTGTACTGAAGACTGGCAAGAATTGATTTATATGTTCTGGGATGT]
[+] EMBL AK059431             [                                                                                                                                                                                                                                                                                                                                                                        AAAGGTATTCTGATAGGAAACGTAAGACACATTCCAAACGTGAAGCTCTTGCGTCATATCTTATACTAACTCCTGCAAATTTCCCTGTGGAACTAGTGCAAGGTTCTAAGCGAGGACAGCCAAGCAGTAAGAAGCTGCGTTGGGATAGAAGCTCAGATGATCAGGCATTTGAAGTTTTTGAGAAGCTTGAAGAGAAGCACAAGGACGGAGACAAGAAAACAGAAAAGGATGGGGATGATGAGGATGAACATGAAGAGGAAGAAGTAGAAGAGGAGAATTCAGATGATGATTATAATCAGAATATCGAGTTTGATGACGACGATGATGACTGGAACCAAGAGGAGGAAGCACATGAAGACTACTATGATTAGAGCCACTGTCTACAAAAGTTGTCCAATATCAAGTTTTGTTTCTGTTCATTTTTCTCTATAGTACTTGCTAGGTGATTAGAGGTAAATGTTTTCCTGTCAATATGCGGTATCAGAAACTAGGATCTGTCTGAATTCTGAAATATGGAGTAGGCTGCTGCTACTGTTCCTATTGTACTGAAGACTGGCAAGAATTGATTTAT              ]


>consensus_1349#0 GCCGCCGACGCCGCACTTCCCCTCGCGCCGCGCCGCTGTTCTCTTCTCCGGCCGCGCTTC TGCCGCGCGGAGAGGTTCGCCGCCTCGATCGACATCCGTCCCCCCTCCAGATGGCGTCCC GGGGCCGCGGGAGAGGCCGGGGGAGGCGGGGAGGAGGGTACGGCTTCGACCACCCGGCCA AGCACACCCCCCACGAGGATTTCCCGGACATCACCCTGCCGGAGATGACGTGCGCCAGGG CGACCATGGAGGAGAAGGCTCTGATACAGTCCACCTTGAAATTTGAGGATTTCTGGAAGA CTTCTTGCTACCACCTGGAGGAGGATGTCCCCAAGAAAAAGAATGATGATAAAGAGATTG AAAGGTATTCTGATAGGAAACGTAAGACACATTCCAAACGTGAAGCTCTTGCGTCATATC TTATACTAACTCCTGCAAATTTCCCTGTGGAACTAGTGCAAGGTTCTAAGCGAGGACAGC CAAGCAGTAAGAAGCTGCGTTGGGATAGAAGCTCAGATGATCAGGCATTTGAAGTTTTTG AGAAGCTTGAAGAGAAGCACAAGGACGGAGACAAGAAAACAGAAAAGGATGGGGATGATG AGGATGAACATGAAGAGGAAGAAGTAGAAGAGGAGAATTCAGATGATGATTATAATCAGA ATATCGAGTTTGATGACGACGATGATGACTGGAACCAAGAGGAGGAAGCACATGAAGACT ACTATGATTAGAGCCACTGTCTACAAAAGTTGTCCAATATCAAGTTTTGTTTCTGTTCAT TTTTCTCTATAGTACTTGCTAGGTGATTAGAGGTAAATGTTTTCCTGTCAATATGCGGTA TCAGAAACTAGGATCTGTCTGAATTCTGAAATATGGAGTAGGCTGCTGCTACTGTTCCTA TTGTACTGAAGACTGGCAAGAATTGATTTATATGTTCTGGGATGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)