Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13508 cluster # 13508       Sequences # 13       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13508#0 length = 2252 sequences # 10  
consensus_13508#1 length = 793 sequences # 1  
consensus_13508#2 length = 505 sequences # 1  
consensus_13508#3 length = 302 sequences # 1  

consensusID : consensus_13508#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2252
fasta sequence
                              [TCCCTCTCTCTCTCCTCTTATCCTTCTCTTCTCCGTTTGCTTC---GCTGCTGCTGCTGCTGTTCTACGCGCGCGACACGGAAGAGAGAAAAGTGGTTTTTTATTGGGTTCCTAAGCCCTTTTTGTTTCCAGAGGCTTCTGGATTGATCGGTTGATCTCTCTCCCTTCCCCTCTAGGGTTTCCTGGGGGTGGATCTGAGGAGCGGCGGCGCTCCTTCGTCCCGGTTTATGTAAATCTGATCGATCCAGAAAGTTTGTGAAAAAAGAGTGTGGCACATACCTAAAGCTGGCTTAAAGTTTGCCCATAGCTAATATCATGGGCGCTCTTTGTGATTTCTGCGGGGAGCAGAGGTCTATGGTTTATTGCCGATCAGATGCAGCATCCTTGTGCTTATCGTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCAGAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCAAGGGATAAGCATGATGAGCATCAGCGACAGTGGTGTCAGTAATCAAGACAATGCTGCAGGGGACAGCAGTTTGTTAGATATTGCTAGTGCAACCCTTATGAGTGATCTTGGCACTGCTGGCAAGCCAAAGTCTTTGATAGGCTCCTCATCTGAAGCTGGCGTGAACCTTCTTCCACTTGCTACTGATCAGATGGCTGGATCCGTGGATTCGACATCAGCTAAGGTGCCCTATACGGCAGACCAAGATATGTTCAGCAAAGACAGTATATATGAAGATTTCTGTGTGGACGATGTTGATCTTAGTTTCGAAAATTATGAGGAACTATTTGGCACCTCCCATATTCAAACAGAGCAACTGTTTGATGATGCTGGGATCGACAGTTACTTTGAATCGAAGGAAATACCTTCTGGAAACTCTGATG---AGCCCAAGCTGATGCAGCCAGTGACCAGCAATGCAGTATCTGCTGATTCAGGGATGTCGATCCCAGGAGCCAAAGGTGATTCCAGTCTTTGTATACCTGTGAGGCAAGCTAGGTCCAGTATCTCTCTTTCATTTTCTGGTTTGACTGGTGAGAGCAGTGCTGGAGATTACCAAGATTGT-GGGGTATCACCAGTGCTCCTTATGGGTGAGCCTCCTTGGCATCCTCCTGGCCCTGAGGGGTCATTTGCTGGAGCTACCAGAGACGATGCTATCACACGATACAAGGAGAAGAAGAAGAGAAGAAAATTTGACAAGAAAATCAGGTATGCATCTCGCAAGGCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGCTGGTGAAGCATACGACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTGTTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACAAACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAGCTGAACAAACTTCACTTGCATTTTTATCTCCTTTCTACTAACCAGAGCATCCACCAACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGA-CAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTCGATGACATTGGAACCCATGTAACCGGCCACCAACTTTTTTGTTTCACTATGCTCAAATATTCGAAAACTTCAGACTGGCTTAATGCTATTATTTGTACTAA-GCATATGCTTGAATATGCGGTCCTTTTTGTTACAAGTAATATTCTTTTTGTGGTTGAT]

[+] EMBL AK098865             [TCCCTCTCTCTCTCCTCTTATCCTTCTCTTCTCCGTTTGCTTC   GCTGCTGCTGCTGCTGTTCTACGCGCGCGACACGGAAGAGAGAAAAGTGGTTTTTTATTGGGTTCCTAAGCCCTTTTTGTTTCCAGAGGCTTCTGGATTGATCGGTTGATCTCTCTCCCTTCCCCTCTAGGGTTTCCTGGGGGTGGATCTGAGGAGCGGCGGCGCTCCTTCGTCCCGGTTTATGTAAATCTGATCGATCCAGAAAGTTTGTGAAAAAAGAGTGTGGCACATACCTAAAGCTGGCTTAAAGTTTGCCCATAGCTAATATCATGGGCGCTCTTTGTGATTTCTGCGGGGAGCAGAGGTCTATGGTTTATTGCCGATCAGATGCAGCATCCTTGTGCTTATCGTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCAGAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCAAGGGATAAGCATGATGAGCATCAGCGACAGTGGTGTCAGTAATCAAGACAATGCTGCAGGGGACAGCAGTTTGTTAGATATTGCTAGTGCAACCCTTATGAGTGATCTTGGCACTGCTGGCAAGCCAAAGTCTTTGATAGGCTCCTCATCTGAAGCTGGCGTGAACCTTCTTCCACTTGCTACTGATCAGATGGCTGGATCCGTGGATTCGACATCAGCTAAGGTGCCCTATACGGCAGACCAAGATATGTTCAGCAAAGACAGTATATATGAAGATTTCTGTGTGGACGATGTTGATCTTAGTTTCGAAAATTATGAGGAACTATTTGGCACCTCCCATATTCAAACAGAGCAACTGTTTGATGATGCTGGGATCGACAGTTACTTTGAATCGAAGGAAATACCTTCTGGAAACTCTGATGAGCAGCCCAAGCTGATGCAGCCAGTGACCAGCAATGCAGTATCTGCTGATTCAGGGATGTCGATCCCAGGAGCCAAAGGTGATTCCAGTCTTTGTATACCTGTGAGGCAAGCTAGGTCCAGTATCTCTCTTTCATTTTCTGGTTTGACTGGTGAGAGCAGTGCTGGAGATTACCAAGATTGT GGGGTATCACCAGTGCTCCTTATGGGTGAGCCTCCTTGGCATCCTCCTGGCCCTGAGGGGTCATTTGCTGGAGCTACCAGAGACGATGCTATCACACGATACAAGGAGAAGAAGAAGAGAAGAAAATTTGACAAGAAAATCAGGTATGCATCTCGCAAGGCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGCTGGTGAAGCATACGACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTGTTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACAAACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAGCTGAACAAACTTCACTTGCATTTTTATCTCCTTTCTACTAACCAGAGCATCCACCTACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGA CAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTCGATGACATTGGAACCCATGTAACCGGCCACCAACTTTTTTGTTTCACTATGCTCAAATATTCGAAAACTTCAGACTGGCTTAATGCTAT                                                                       ]
[+] EMBL AK121630             [  CCTCTCTCTCTCCTCTTATCCTTCTCTTCTCCGTTTGCTTC   GCTGCTGCTGCTGCTGTTCTACGCGCGCGACACGGAAGAGAGAAAAGTGGTTTTTTATTGGGTTCCTAAGCCCTTTTTGTTTCCAGAGGCTTCTGGATTGATCGGTTGATCTCTCTCCCTTCCCCTCTAGGGTTTCCTGGGGGTGGATCTGAGGAGCGGCGGCGCTCCTTCGTCCCGGTTTATGTAAATCTGATCGATCCAGAAAGTTTGTGAAAAAAGAGTGTGGCACATACCTAAAGCTGGCTTAAAGTTTGCCCATAGCTAATATCATGGGCGCTCTTTGTGATTTCTGCGGGGAGCAGAGGTCTATGGTTTATTGCCGATCAGATGCAGCATCCTTGTGCTTATCGTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCAGAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCAAGGGATAAGCATGATGAGCATCAGCGACAGTGGTGTCAGTAATCAAGACAATGCTGCAGGGGACAGCAGTTTGTTAGATATTGCTAGTGCAACCCTTATGAGTGATCTTGGCACTGCTGGCAAGCCAAAGTCTTTGATAGGCTCCTCATCTGAAGCTGGCGTGAACCTTCTTCCACTTGCTACTGATCAGATGGCTGGATCCGTGGATTCGACATCAGCTAAGGTGCCCTATACGGCAGACCAAGATATGTTCAGCAAAGACAGTATATATGAAGATTTCTGTGTGGACGATGTTGATCTTAGTTTCGAAAATTATGAGGAACTATTTGGCACCTCCCATATTCAAACAGAGCAACTGTTTGATGATGCTGGGATCGACAGTTACTTTGAATCGAAGGAAATACCTTCTGGAAACTCTGATG   AGCCCAAGCTGATGCAGCCAGTGACCAGCAATGCAGTATCTGCTGATTCAGGGATGTCGATCCCAGGAGCCAAAGGTGATTCCAGTCTTTGTATACCTGTGAGGCAAGCTAGGTCCAGTATCTCTCTTTCATTTTCTGGTTTGACTGGTGAGAGCAGTGCTGGAGATTACCAAGATTGT GGGGTATCACCAGTGCTCCTTATGGGTGAGCCTCCTTGGCATCCTCCTGGCCCTGAGGGGTCATTTGCTGGAGCTACCAGAGACGGTGCTATCACACGATACAAGGAGAAGAAGAAGAGAAGAAAATTTGACAAGAAAATCAGGTATGCATCTCGCAAGGCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGCTGGTGAAGCATACGACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTGTTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACAAACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAGCTGAACAAACTTCACTTGCATTTTTATCTCCTTTCTACTAACCAGAGCATCCACCTACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGA CAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTCGATGACATTGGAACCCATGTAACCGGCCACCAACTTTTTTGTTTCACTATGCTCAAATATTCGAAAACTTCAGACTGGCTTAATGCTATTATT                                                                   ]
[+] EMBL CB635649             [           CTCCTCTTATCCTTCTCTTCTCTGTTTGCTTCGCTGCTGCTGCTGCTGCTGTTCTACGCGCGCGACACGGAAGAGAGAAAAGTGGTTTTTTATTGGGTTCCTAAGCCCTTTTTGTTTCCAGAGGCTTCTGGATTGATCGGTTGATCTCTCTCCCTTCCCCTCTAGGGTTTCCTGGGGGTGGATCTGAGGAGCGGCGGCGCTCCTTCGTCCCGGTTTATGTAAATCTGATCGATCCAGAAAGTTTGTGAAAAAAGAGTGTGGCACATACCTAAAGCTGGCTTAAAGTTTGTCCATAGCTAATATCATGGGCGCTCTTTGTGATTTCTGCGGGGAGCAGAGGTCTATGGTTTATTGCCGATCAGATGCAGCATCCTTGTGCTTATCGTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCAGAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCAAGGGATAAGCATGATGAGCATCAGCGACAGTGGTGTCAGTAATCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK072192             [                           CTTCTCCGTTTGCTTC   GCTGCTGCTGCTGCTGTTCTACGCGCGCGACACGGAAGAGAGAAAAGTGGTTTTTTATTGGGTTCCTAAGCCCTTTTTGTTTCCAGAGGCTTCTGGATTGATCGGTTGATCTCTCTCCCTTCCCCTCTAGGGTTTCCTGGGGGTGGATCTGAGGAGCGGCGGCGCTCCTTCGTCCCGGTTTATGTAAATCTGATCGATCCAGAAAGTTTGTGAAAAAAGAGTGTGGCACATACCTAAAGCTGGCTTAAAGTTTGCCCATAGCTAATATCATGGGCGCTCTTTGTGATTTCTGCGGGGAGCAGAGGTCTATGGTTTATTGCCGATCAGATGCAGCATCCTTGTGCTTATCGTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCAGAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCAAGGGATAAGCATGATGAGCATCAGCGACAGTGGTGTCAGTAATCAAGACAATGCTGCAGGGGACAGCAGTTTGTTAGATATTGCTAGTGCAACCCTTATGAGTGATCTTGGCACTGCTGGCAAGCCAAAGTCTTTGATAGGCTCCTCATCTGAAGCTGGCGTGAACCTTCTTCCACTTGCTACTGATCAGATGGCTGGATCCGTGGATTCGACATCAGCTAAGGTGCCCTATACGGCAGACCAAGATATGTTCAGCAAAGACAGTATATATGAAGATTTCTGTGTGGACGATGTTGATCTTAGTTTCGAAAATTATGAGGAACTATTTGGCACCTCCCATATTCAAACAGAGCAACTGTTTGATGATGCTGGGATCGACAGTTACTTTGAATCGAAGGAAATACCTTCTGGAAACTCTGATG   AGCCCAAGCTGATGCAGCCAGTGACCAGCAATGCAGTATCTGCTGATTCAGGGATGTCGATCCCAGGAGCCAAAGGTGATTCCAGTCTTTGTATACCTGTGAGGCAAGCTAGGTCCAGTATCTCTCTTTCATTTTCTGGTTTGACTGGTGAGAGCAGTGCTGGAGATTACCAAGATTGTGGGGGTATCACCAGTGCTCCTTATGGGTGAGCCTCCTTGGCATCCTCCTGGCCCTGAGGGGTCATTTGCTGGAGCTACCAGAGACGATGCTATCACACGATACAAGGAGAAGAAGAAGAGAAGAAAATTTGACAAGAAAATCAGGTATGCATCTCGCAAGGCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGCTGGTGAAGCATACGACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTGTTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACAAACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAGCTGAACAAACTTCACTTGCATTTTTATCTCCTTTCTACTAACCAGAGCATCCACCTACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGA CAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTCGATGACATTGGAACCCATGTAACCGGCCACCAACTTTTTTGTTTCACTATGCTCAAATATTCGAAAACTTCAGACTGGCTTAATGCTATTATTTGTACTAA GCATATGCTTGAATATGCGGTCCCTTTTGTTACAAGTAATATTCTTTTTGTGGTTGAT]
[+] EMBL CB628155             [                                                                   CGCGCGCGACACGGAAGAGAGAAAAGTGGTTTTTTATTGGGTTCCTAAGCCCTTTTTGTTTCCAGAGGCTTCTGGATTGATCGGTTGATCTCTCTCCCTTCCCCTCTAGGGTTTCCTGGGGGTGGATCTGAGGAGCGGCGGCGCTCCTTCGTCCCGGTTTATGTAAATCTGATCGATCCAGAAAGTTTGTGAAAAAAGAGTGTGGCACATACCTAAAGCTGGCTTAAAGTTTGTCCATAGCTAATATCATGGGCGCTCTTTGTGATTTCTGCGGGGAGCAGAGGTCTATGGTTTATTGCCGATCAGATGCAGCATCCTTGTGCTTATCGTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCAGAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCAAGGGATAAGCATGATGAGCATCAGCGACAGTGGTGTCAGTAATCAAGACAATGCTGCAGGGGACAGCAGTTTGTTAGATATTGCTAGTGCAACCCTTATGAGTGATCTTGGCACTGCTGGCAAGCCAAAGTCTTTGATAGGCTCCTCATCTGAAGCTGGCGTGAACCTTCTTCCACTTGCTACTGATCAGATGGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB628156             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TATGCATCTCGCAAGGCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGCTGGTGAAGCATACGACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTGTTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACAAACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAGCTGAACAAACTTCACTTGCATTTTTATCTCCTTTCTACTAACCAGAGCATCCACCAACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGA CAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTTGATGACATTGGAACCCATGTAACCGGCCACCAACTTTTTTGTCTCACTATGCTCAAATATTCGAAAACTTCAGACTGGCTTAATGCTATTATTTGTACTAA GGATATGCTTGAATATGCGGTCCTTTTTGTTACAA                       ]
[-] EMBL CB635650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TACGACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTGTTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACAAACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAGCTGAACAAACTTCACTTGCATTTTTATCTCCTTTCTACTAACCAGAGCATCCACCAACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGA CAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTTGATGACATTGGAACCCATGTAACCGCGCACCAACTTTTTTGTCTCACTATGCTCAAATATTCGAAAACTTCAGACTGGCTTAATGCTATTATTTGTAGGAACGCATATGCTTGAATATGCGGTCCTTTTTGTTAAAAaagga                  ]
[-] EMBL CA752591             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTATCCAAGTGTTAAG TAGCAAGCATCACCCAATGCTTGTTG GGCTGCCA GAAGG ACTCATACT CAACCAATGTGGCAGGCCTGCCTCTAAAACCACCAAAAAAACCAGAGCAATCAAGGGG CAAAAAGG CAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTG ACAGTGAAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAGCTGAACAAACTTCACTTGCATTTTTATCTCCTTTCTACTAACCAGAGCATCCACCAACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGA CAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTTGATGACAT                                                                                                                                                        ]
[+] EMBL BI813448             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGATACAGCTGAACAAACTTCACTTGCATTTTTATCTCCGTTCTACTAACCAGAGCATCCACCAACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGACCAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTAaaaaa                                                                                                                                                                       ]
[+] EMBL AU222911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gttgAATATNCGGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTCGATGACATTGGAACCCATGTAACCGGCCNCCAACTTTTTTGTTTCACTATGCTCAAATATTCGAAAACTTCAGACTGGCTTAATGCTATTATTTGTACTAA GCATATGCTTGAATATGCGGTCCTTTTTGTTACAAGTAATATTCTTTTaaa       ]


>consensus_13508#0 TCCCTCTCTCTCTCCTCTTATCCTTCTCTTCTCCGTTTGCTTCGCTGCTGCTGCTGCTGT TCTACGCGCGCGACACGGAAGAGAGAAAAGTGGTTTTTTATTGGGTTCCTAAGCCCTTTT TGTTTCCAGAGGCTTCTGGATTGATCGGTTGATCTCTCTCCCTTCCCCTCTAGGGTTTCC TGGGGGTGGATCTGAGGAGCGGCGGCGCTCCTTCGTCCCGGTTTATGTAAATCTGATCGA TCCAGAAAGTTTGTGAAAAAAGAGTGTGGCACATACCTAAAGCTGGCTTAAAGTTTGCCC ATAGCTAATATCATGGGCGCTCTTTGTGATTTCTGCGGGGAGCAGAGGTCTATGGTTTAT TGCCGATCAGATGCAGCATCCTTGTGCTTATCGTGTGACCGTAATGTGCATTCAGCTAAT GCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCC ATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCAT AGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGC CCATCATCTTCAGAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCT CCTGAGCCGAATTGCGAGCAAGGGATAAGCATGATGAGCATCAGCGACAGTGGTGTCAGT AATCAAGACAATGCTGCAGGGGACAGCAGTTTGTTAGATATTGCTAGTGCAACCCTTATG AGTGATCTTGGCACTGCTGGCAAGCCAAAGTCTTTGATAGGCTCCTCATCTGAAGCTGGC GTGAACCTTCTTCCACTTGCTACTGATCAGATGGCTGGATCCGTGGATTCGACATCAGCT AAGGTGCCCTATACGGCAGACCAAGATATGTTCAGCAAAGACAGTATATATGAAGATTTC TGTGTGGACGATGTTGATCTTAGTTTCGAAAATTATGAGGAACTATTTGGCACCTCCCAT ATTCAAACAGAGCAACTGTTTGATGATGCTGGGATCGACAGTTACTTTGAATCGAAGGAA ATACCTTCTGGAAACTCTGATGAGCCCAAGCTGATGCAGCCAGTGACCAGCAATGCAGTA TCTGCTGATTCAGGGATGTCGATCCCAGGAGCCAAAGGTGATTCCAGTCTTTGTATACCT GTGAGGCAAGCTAGGTCCAGTATCTCTCTTTCATTTTCTGGTTTGACTGGTGAGAGCAGT GCTGGAGATTACCAAGATTGTGGGGTATCACCAGTGCTCCTTATGGGTGAGCCTCCTTGG CATCCTCCTGGCCCTGAGGGGTCATTTGCTGGAGCTACCAGAGACGATGCTATCACACGA TACAAGGAGAAGAAGAAGAGAAGAAAATTTGACAAGAAAATCAGGTATGCATCTCGCAAG GCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGCTGGTGAAGCATAC GACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTG TTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACA AACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAA AAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTC TGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGAGCGATTTGAGTCGCT GCCCACCTTTTGTGAATTAATCTTGATACAGCTGAACAAACTTCACTTGCATTTTTATCT CCTTTCTACTAACCAGAGCATCCACCAACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTC CAGATTGGACTATTAGCAAGACAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTAT TTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAA TACCAGATCAGAATAAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTCGATGACA TTGGAACCCATGTAACCGGCCACCAACTTTTTTGTTTCACTATGCTCAAATATTCGAAAA CTTCAGACTGGCTTAATGCTATTATTTGTACTAAGCATATGCTTGAATATGCGGTCCTTT TTGTTACAAGTAATATTCTTTTTGTGGTTGAT



consensusID : consensus_13508#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 793
fasta sequence
                              [CTTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCATAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCTACCAGAGACGATGCTATCACACGATACAAGGAGAAGAAGAAGAGAATAAAATTTGACAAGAAAATCAGGTATGCATCTCGCAAGGCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGCTGGTGAAGCATACGACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTGTTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACAAACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCAGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAACTGAACAAACTTCACTTGCATTTTTATCT]

[+] EMBL CB669430             [CTTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCATAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCTACCAGAGACGATGCTATCACACGATACAAGGAGAAGAAGAAGAGAATAAAATTTGACAAGAAAATCAGGTATGCATCTCGCAAGGCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGCTGGTGAAGCATACGACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTGTTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACAAACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCAGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAACTGAACAAACTTCACTTGCATTTTTATCT]


>consensus_13508#1 CTTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGACACTTC TGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGCCTCGC TTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCATAAGA GGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCATAACTTTCAAAAATCTGGA CATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCTACCAGAGACGA TGCTATCACACGATACAAGGAGAAGAAGAAGAGAATAAAATTTGACAAGAAAATCAGGTA TGCATCTCGCAAGGCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGC TGGTGAAGCATACGACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAA CATTATCCAAGTGTTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGG CACTCATACTACAAACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCA ATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCC CTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCAGGAGGAGC GATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGATACAACTGAACAAACTTCACT TGCATTTTTATCT



consensusID : consensus_13508#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 505
fasta sequence
                              [CATACCAAGTTAGGTTACCAACATCAACCAATCCTTTTTGCTGCAGAAGCACTCATACTACACACACATTTGCAGCCTCCTCTATACCACCCTTATTACACGACAATCAAGGGGACCAAAAGGACAAAAGATGTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGACGATTTGAGTCGCTGCCCACCTTTTTGTGAATTAATCTTGATACAGCTGAACCAACTTCACTTGCATTTGTTATCTCCTTTCTACTAACCAGAGCATCCACCAACCCTTCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGACAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGT]

[+] EMBL BI794996             [CATACCAAGTTAGGTTACCAACATCAACCAATCCTTTTTGCTGCAGAAGCACTCATACTACACACACATTTGCAGCCTCCTCTATACCACCCTTATTACACGACAATCAAGGGGACCAAAAGGACAAAAGATGTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGACGATTTGAGTCGCTGCCCACCTTTTTGTGAATTAATCTTGATACAGCTGAACCAACTTCACTTGCATTTGTTATCTCCTTTCTACTAACCAGAGCATCCACCAACCCTTCTGTGGTGTTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGACAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGT]


>consensus_13508#2 CATACCAAGTTAGGTTACCAACATCAACCAATCCTTTTTGCTGCAGAAGCACTCATACTA CACACACATTTGCAGCCTCCTCTATACCACCCTTATTACACGACAATCAAGGGGACCAAA AGGACAAAAGATGTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGT ACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGACGATTTGAGTCGCTGCCC ACCTTTTTGTGAATTAATCTTGATACAGCTGAACCAACTTCACTTGCATTTGTTATCTCC TTTCTACTAACCAGAGCATCCACCAACCCTTCTGTGGTGTTTTTGGTGGTATGCTTCCAG ATTGGACTATTAGCAAGACAAGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTA TTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATAC CAGATCAGAATAAACTGGTAGATGT



consensusID : consensus_13508#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 302
fasta sequence
                              [CCGCCCACGCGTCCGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATNAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTTGATGACATTGGAACCCATGTAACCGGCCACCAACTTTTTTGTTTCACTATGCTCAAATATTCGAAAACTTCAGACTGGCTTAATGCTATTATTTGTACTAAGCATATNCTGAATATGCGGTCCTTTTTGTTACAAAAAA]

[+] EMBL BM419169             [CCGCCCACGCGTCCGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATNAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTTGATGACATTGGAACCCATGTAACCGGCCACCAACTTTTTTGTTTCACTATGCTCAAATATTCGAAAACTTCAGACTGGCTTAATGCTATTATTTGTACTAAGCATATNCTGAATATGCGGTCCTTTTTGTTACAAAAAA]


>consensus_13508#3 CCGCCCACGCGTCCGGATGGATGTAGTCGTGAAATCTTCTGCTGCTCTATTTATTGTTAT GTAAAATCTGCTGTAATCCGGAGTTTATTCTGCAACTCTGCATGTGTAAATACCAGATCA GAATNAACTGGTAGATGTAAAGTTTTCTTTATTTTCTCAAGTTGATGACATTGGAACCCA TGTAACCGGCCACCAACTTTTTTGTTTCACTATGCTCAAATATTCGAAAACTTCAGACTG GCTTAATGCTATTATTTGTACTAAGCATATNCTGAATATGCGGTCCTTTTTGTTACAAAA AA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13508#0      TCCCTCTCTCTCTCCTCTTATCCTTCTCTTCTCCGTTTGCTTCGCTGCTGCTGCTGCTGT 60
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      TCTACGCGCGCGACACGGAAGAGAGAAAAGTGGTTTTTTATTGGGTTCCTAAGCCCTTTT 120
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      TGTTTCCAGAGGCTTCTGGATTGATCGGTTGATCTCTCTCCCTTCCCCTCTAGGGTTTCC 180
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      TGGGGGTGGATCTGAGGAGCGGCGGCGCTCCTTCGTCCCGGTTTATGTAAATCTGATCGA 240
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      TCCAGAAAGTTTGTGAAAAAAGAGTGTGGCACATACCTAAAGCTGGCTTAAAGTTTGCCC 300
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      ATAGCTAATATCATGGGCGCTCTTTGTGATTTCTGCGGGGAGCAGAGGTCTATGGTTTAT 360
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      TGCCGATCAGATGCAGCATCCTTGTGCTTATCGTGTGACCGTAATGTGCATTCAGCTAAT 420
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      GCTCTTTCTCGGCGCCATACAAGGACACTTCTGTGTGATAGATGTGCTTCACAGCCTGCC 480
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      ATGGTCCGCTGCCTTGTAGAAAATGCCTCGCTTTGCCAAAATTGTGATTGGAATGGGCAT 540
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      AGTGCTGGGTCTTCAGCTGCTGGTCATAAGAGGCAGACCATAAACTGCTACTCAGGGTGC 600
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      CCATCATCTTCAGAACTTTCAAAAATCTGGACATTTGTTTCGGATATTCCTAATGTAGCT 660
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      CCTGAGCCGAATTGCGAGCAAGGGATAAGCATGATGAGCATCAGCGACAGTGGTGTCAGT 720
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      AATCAAGACAATGCTGCAGGGGACAGCAGTTTGTTAGATATTGCTAGTGCAACCCTTATG 780
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      AGTGATCTTGGCACTGCTGGCAAGCCAAAGTCTTTGATAGGCTCCTCATCTGAAGCTGGC 840
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      GTGAACCTTCTTCCACTTGCTACTGATCAGATGGCTGGATCCGTGGATTCGACATCAGCT 900
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      AAGGTGCCCTATACGGCAGACCAAGATATGTTCAGCAAAGACAGTATATATGAAGATTTC 960
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      TGTGTGGACGATGTTGATCTTAGTTTCGAAAATTATGAGGAACTATTTGGCACCTCCCAT 1020
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      ATTCAAACAGAGCAACTGTTTGATGATGCTGGGATCGACAGTTACTTTGAATCGAAGGAA 1080
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      ATACCTTCTGGAAACTCTGATGAGCCCAAGCTGATGCAGCCAGTGACCAGCAATGCAGTA 1140
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      TCTGCTGATTCAGGGATGTCGATCCCAGGAGCCAAAGGTGATTCCAGTCTTTGTATACCT 1200
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      GTGAGGCAAGCTAGGTCCAGTATCTCTCTTTCATTTTCTGGTTTGACTGGTGAGAGCAGT 1260
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      GCTGGAGATTACCAAGATTGTGGGGTATCACCAGTGCTCCTTATGGGTGAGCCTCCTTGG 1320
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      CATCCTCCTGGCCCTGAGGGGTCATTTGCTGGAGCTACCAGAGACGATGCTATCACACGA 1380
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      TACAAGGAGAAGAAGAAGAGAAGAAAATTTGACAAGAAAATCAGGTATGCATCTCGCAAG 1440
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      GCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTGTTAAGGCTGGTGAAGCATAC 1500
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      GACTACGATCCACTCTGTGAAACGAGGAGCTACTGAACACAATAAAACATTATCCAAGTG 1560
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ------------------------------------------------------------
                                                                                   

consensus_13508#0      TTAGGTTAGCAAGCATCAACCAATGCTTGTTGTGGCTGGCAGGAAGGCACTCATACTACA 1620
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      -----CTTGTGACCGTAATGTGCATTCAGCTAATGCTCTTTCTCGGCGCCATACAAGGAC 55
                                                                                   

consensus_13508#0      AACAATGTGGCAGGCCTGCCTCTAAAAACAACAAAAAAAACAGAGCAATCAAGGGGACAA 1680
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      ACTTCTGTGTGATAGATGTGCTTCACAGCCTGCCATGGTCCGCTGCCTTGTAGAAAATGC 115
                                                                                   

consensus_13508#0      AAAGGACAAAAAGATTTGAATTTGGGAAATTTTTCAGATGCTACCCCCTCCTTTTTCTTC 1740
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      CTCGCTTTGCCAAAATTGTGATTGGAATGGGCATAGTGCTGGGTCTTCAGCTGCTGGTCA 175
                                                                                   

consensus_13508#0      TGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGAGCGATTTGAGTCGCT 1800
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------------------------------------------------
consensus_13508#1      TAAGAGGCAGACCATAAACTGCTACTCAGGGTGCCCATCATCTTCATAACTTTCAAAAAT 235
                                                                                   

consensus_13508#0      GCCCACCTTTTGTGAATTAATCTTGATACAGCTGAACAAACTTCACTTGCATTTTTATCT 1860
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ------------------CATACCAAGTTAGGTTACCAACATCAACCAATCCTTTTTGCT 42
consensus_13508#1      CTGGACATTTGTTTCGGATATTCCTAATGTAGCTCCTGAGCCGAATTGCGAGCTACCAGA 295
                                                                                   

consensus_13508#0      CCTTTCTACTAACCAGAGCATCCACCAACCCTTGCTGTGGTGTTTTTGGTGGTATGCTTC 1920
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      GCAGAAGCACTCATACTACACACACATTTGCAGCCTCCTCTATACCACCCTTATTACACG 102
consensus_13508#1      GACGATGCTATCACACGATACAAGGAGAAGAAGAAGAGAATAAAATTTGACAAGAAAAT- 354
                                                                                   

consensus_13508#0      CAGATTGGACTATTAGCAAGACAAGGATGGATGTAGTCGTGAAATCTTC----TGCTGCT 1976
consensus_13508#3      ---------CCGCCCACGCGTCC-GGATGGATGTAGTCGTGAAATCTTC----TGCTGCT 46
consensus_13508#2      ACAATCAAGGGGACCAAAAGGACAAAAGATGTGAATTTGGGAAATTTTTCAGATGCTACC 162
consensus_13508#1      -CAGGTATGCATCTCGCAAGGCTAGGGCAGATGTGAGAAAAAGAGTCAAGGGCCGGTTTG 413
                                          *           **        * *          * *   

consensus_13508#0      CTAT--TTATTGTTATGTA---------AAATCTGCTGTAATCCGGAGTTTATTCTGCAA 2025
consensus_13508#3      CTAT--TTATTGTTATGTA---------AAATCTGCTGTAATCCGGAGTTTATTCTGCAA 95
consensus_13508#2      CCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTTCTGTTGCTTTCGGGAGGA 222
consensus_13508#1      TTAAGGCTGGTGAAGCATAC--------GACTACGATCCACTCTGTGAAACGAGGAGCTA 465
                              *  *      **          * *  *      ** *              *

consensus_13508#0      C--TCTGCATGTGTAAATACCAGATCA-GAATAAAC--TGGTAGATGTAAAGTTTTCTTT 2080
consensus_13508#3      C--TCTGCATGTGTAAATACCAGATCA-GAATNAAC--TGGTAGATGTAAAGTTTTCTTT 150
consensus_13508#2      CGATTTGAGTCGCTGCCCACCTTTTTGTGAATTAATCTTGATACA-GCTGAACCAACTTC 281
consensus_13508#1      C--TGAACACAATAAAACATTAT-CCAAGTGTTAGG-TTAGCAAGCATCAACCAATGCTT 521
                       *  *              *         *  * *    *   *       *       * 

consensus_13508#0      ATTTTCTCAAGTCG-ATGACATTGGAACCCATGTAACCGGCCACCAACTTTTTTGTTTCA 2139
consensus_13508#3      ATTTTCTCAAGTTG-ATGACATTGGAACCCATGTAACCGGCCACCAACTTTTTTGTTTCA 209
consensus_13508#2      ACTTGCATTTGTT--ATCTCCTTTCTACTAACCAGAGCATCCACCAACCCTTCTGTGGTG 339
consensus_13508#1      GTTGTGGCTGGCAGGAAGGCACTCATACT-ACAAACAATGTGGCAGGCCTGCCTCTAAAA 580
                         *       *    *   *  *   **  *            *   *     * *    

consensus_13508#0      CTAT-GCTCAAATATTCGAAAACTTCAG-ACTGGCTTAATGCTATTATTTGTACTAAGCA 2197
consensus_13508#3      CTAT-GCTCAAATATTCGAAAACTTCAG-ACTGGCTTAATGCTATTATTTGTACTAAGCA 267
consensus_13508#2      TTTTTGGTGGTATGCTTCCAGATTGGACTATTAGCAAGACAAGGATGGATGTAGTCGTGA 399
consensus_13508#1      ACAACAAAAAAAACAGAGCAATCAAGGGGACAAAAAGGACAAAAAGATTTGAATTTGGGA 640
                                  *       *         *        *          ** * *    *

consensus_13508#0      TATGCTTGAA----TATGCGGTCCTTTTTGTTACAAGTAATATTCTTTTTGTGGTTGAT- 2252
consensus_13508#3      TATNCT-GAA----TATGCGGTCCTTTTTGTTACAAAAAA-------------------- 302
consensus_13508#2      AATCTT--CT----GCTGCTCTATTTATTGTTATGTAAAATCTGCTGTAATCCGGAGTTT 453
consensus_13508#1      AATTTTTCAGATGCTACCCCCTCCTTTTTCTTCTGTACAGTGGAGGGAATTTGCATCTTT 700
                        **  *            *  *  ** ** **      *                     

consensus_13508#0      ------------------------------------------------------------
consensus_13508#3      ------------------------------------------------------------
consensus_13508#2      ATTCTGCAACTCTGCATGTGTAAATACCAGATCAGAATAAACTGGTAGATGT-------- 505
consensus_13508#1      CTGTTGCTTTCAGGAGGAGCGATTTGAGTCGCTGCCCACCTTTTGTGAATTAATCTTGAT 760
                                                                                   

consensus_13508#0      ---------------------------------
consensus_13508#3      ---------------------------------
consensus_13508#2      ---------------------------------
consensus_13508#1      ACAACTGAACAAACTTCACTTGCATTTTTATCT 793
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)