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Oryza sativa
cluster # 13535 cluster # 13535       Sequences # 13       consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13535#0 length = 2372 sequences # 7  
consensus_13535#1 length = 691 sequences # 1  
 consensus_13535#2 length = 667 sequences # 2  
consensus_13535#3 length = 429 sequences # 2  
consensus_13535#4 length = 140 sequences # 1  
consensusID : consensus_13535#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2372
fasta sequence 
                              [CTAAATAAAAAAACAACAGAAAAAAAAGAAAACGACGGCGTCTTCACTCCTCTCCAGTCTGCGCCACCACGTCCGCGTCCATCCGCCACTGCCGCACCTCCATCCGCGCGCCGCCCCTCCTCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCCGCCCCCTCCCCACCCCACCCCGGCCGCCCGGGAGGAGCCACCTCCCACCCGTGACGAGACGGCTTCAACCCCTCGCCCGCCGCTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGGCGGCGAGCTTCTCCGACTCCGGCGACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATTGATTGATTGATGGATTGATTGGCCGGGATATGCTGATACCATTGAGAGGAATTGTTGACTGATTGATTCCTACCTGGTGATGGCTTCCAAGGCTGTTCCTGATGTAGTCACCGACAAGAAATGCGATAAAACCATGGCGGCATCCTCTGAAATGTCGCAATCCCAAGAAGTTATTTCGAGAGGGGGTAAACTTGGGACTGCTTCATCCAGAGAGACTCTGCTGGGGGATGTAGCCACGTCCAGTGGGGTGAAAGAACAAGATAAGGATAGCTGTTCTGTTGATGAATCTGTGAAGCTGGATGGCAATGAAGATGCTGAGAAAAGCTCGTTGCGCGGCAGCGTTAAGGATAGCTCGGCTTCTGCCAAAGGCAGCGACAGGGCAAGCAGCCTGACAAAGGTGAGTGGCAGCACGAAGGTGAGCGACCATGCTGCTGACATTGTTGGGAGCAGCAAGAGCAGTGTTTATCGAGCCAGTGCTGGCAGTGATGTGAGTGATGAGAGCACCTGCAGCAGTATATGCAGCAGCGCGAGCAAACCTCACAAGTCGAATGATTCAAGGTGGGAAGCGATACAGATGGTCCGAACCAAAGAAGGTTCGCTGGGGTTAGGCCATTTCAGGCTACTTAAGAGGCTTGGTTGTGGTGACATTGGCAGTGTTTATTTGTCGGAGCTTAGTGGAACAAAGTGCTACTTCGCTATGAAGATTATGGACAA-GGCGTCTCTAGCGAGCCGCAAAAAGCTACTGAGAGCCCAGACTGAAAGGGAGATATTGCAGTGCCTGGACCATCCTTTTTTGCCAACATTGTACACTCATTTTGAGACTGATAAGTTCTCATGCCTA-GTAATGGAGTTTTGCCCTGGAGGAGACCTGCACACCCTAAGGCAAAAGCAACCGGGGAAGTTTTTTCCGGAACAAGCTGCCAAGTTTTATGTGGCTGAGGTGCTTCTTGCTCTAGAATACCTGCATATGCTTGGCATCATATATCGGGACCTTAAGCCAGAAAATGTTCTTGTGAGAGAAGATGGCCACATCATGCTGTCTGATTTTGATTTGTCCCTAAGATGTGCTGTGAGCCCTACCCTTCTGAAATCCTCAAACCCTGGGGTAGATCCAAACCAAAAGGGTAATCCATCTTATTGTGTACAGCCAGTGTGCATCGAGCCAGCTTGTATCCAACCCTCTTGTGTTACAACGACCACATGCTTCGCTCCACGCTTTTTCTCCTCCAAATCCAAAAAGGAGAAGAAGGCAAAAACAGACATTGCAAGTCAGGTCAGACCACTTCCTGAGCTTGTTGCAGAACCTACAGATGCAAGATCGATGTCATTTGTTGGCACCCATGAGTACTTGGCACCTGAGACTATAAAGGGTGAGGGGCATGGAAGTGCTGTCGACTGGTGGACTTTTGGCATATTCTTGTATGAACTTCTTTTTGGCAAGACACCTTTCAAAGGTTCAGGGAATAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTTCCCAGAATCACCTGTTGTGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACATCGTTTGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACTGGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGTCAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTG-CAAGTTGTAAAGTTCTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGATATTCAGTTGGCCTATGCTCCCATTTCTGTTCTTAAAAAACTTTTGCATTTCGTGGACCTCCATCAATCGCATTAGATTAGATGGGAGACCTTTCTGTTTAGAACCTGTAATCCTCCTTTTTTTTTTTCACTGAGCATTAGGTTTCCTTGAACAACAAATAAATAATTTC]

[+] EMBL AK070835             [CTAAATAAAAAAACAACAGAAAAAAAAGAAAACGACGGCGTCTTCACTCCTCTCCAGTCTGCGCCACCACGTCCGCGTCCATCCGCCACTGCCGCACCTCCATCCGCGCGCCGCCCCTCCTCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCCGCCCCCTCCCCACCCCACCCCGGCCGCCCGGGAGGAGCCACCTCCCACCCGTGACGAGACGGCTTCAACCCCTCGCCCGCCGCTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGGCGGCGAGCTTCTCCGACTCCGGCGACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATTGATTGATTGATGGATTGATTGGCCGGGATATGCTGATACCATTGAGAGGAATTGTTGACTGATTGATTCCTACCTGGTGATGGCTTCCAAGGCTGTTCCTGATGTAGTCACCGACAAGAAATGCGATAAAACCATGGCGGCATCCTCTGAAATGTCGCAATCCCAAGAAGTTATTTCGAGAGGGGGTAAACTTGGGACTGCTTCATCCAGAGAGACTCTGCTGGGGGATGTAGCCACGTCCAGTGGGGTGAAAGAACAAGATAAGGATAGCTGTTCTGTTGATGAATCTGTGAAGCTGGATGGCAATGAAGATGCTGAGAAAAGCTCGTTGCGCGGCAGCGTTAAGGATAGCTCGGCTTCTGCCAAAGGCAGCGACAGGGCAAGCAGCCTGACAAAGGTGAGTGGCAGCACGAAGGTGAGCGACCATGCTGCTGACATTGTTGGGAGCAGCAAGAGCAGTGTTTATCGAGCCAGTGCTGGCAGTGATGTGAGTGATGAGAGCACCTGCAGCAGTATATGCAGCAGCGCGAGCAAACCTCACAAGTCGAATGATTCAAGGTGGGAAGCGATACAGATGGTCCGAACCAAAGAAGGTTCGCTGGGGTTAGGCCATTTCAGGCTACTTAAGAGGCTTGGTTGTGGTGACATTGGCAGTGTTTATTTGTCGGAGCTTAGTGGAACAAAGTGCTACTTCGCTATGAAGATTATGGACAA GGCGTCTCTAGCGAGCCGCAAAAAGCTACTGAGAGCCCAGACTGAAAGGGAGATATTGCAGTGCCTGGACCATCCTTTTTTGCCAACATTGTACACTCATTTTGAGACTGATAAGTTCTCATGCCTA GTAATGGAGTTTTGCCCTGGAGGAGACCTGCACACCCTAAGGCAAAAGCAACCGGGGAAGTTTTTTCCGGAACAAGCTGCCAAGTTTTATGTGGCTGAGGTGCTTCTTGCTCTAGAATACCTGCATATGCTTGGCATCATATATCGGGACCTTAAGCCAGAAAATGTTCTTGTGAGAGAAGATGGCCACATCATGCTGTCTGATTTTGATTTGTCCCTAAGATGTGCTGTGAGCCCTACCCTTCTGAAATCCTCAAACCCTGGGGTAGATCCAAACCAAAAGGGTAATCCATCTTATTGTGTACAGCCAGTGTGCATCGAGCCAGCTTGTATCCAACCCTCTTGTGTTACAACGACCACATGCTTCGCTCCACGCTTTTTCTCCTCCAAATCCAAAAAGGAGAAGAAGGCAAAAACAGACATTGCAAGTCAGGTCAGACCACTTCCTGAGCTTGTTGCAGAACCTACAGATGCAAGATCGATGTCATTTGTTGGCACCCATGAGTACTTGGCACCTGAGACTATAAAGGGTGAGGGGCATGGAAGTGCTGTCGACTGGTGGACTTTTGGCATATTCTTGTATGAACTTCTTTTTGGCAAGACACCTTTCAAAGGTTCAGGGAATAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTTCCCAGAATCACCTGTTGTGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACATCGTTTGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACTGGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGTCAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTG CAAGTTGTAAAGTTCTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGATATTCAGTTGGCCTATGCTCCCATTTCTGTTCTTAAGTTCCTTTTGCATTTCGTGGACCTCCATCAATCGCATTAGATTAGATGGGAGACCTTTCTGTTTAGAACCTGTAATCCTCCTTTTTTTTTTTCACTGAGCATTAGGTTTCCTTGAACAACAAATAAATAATTTC]
[+] EMBL CB639719             [                                                         TCTGCGCCACCACGTCCGCGTCCATCCGCCACTGCCGCACCTCCATCCGCGCGCCGCCCCTCCTCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCCGCCCCCTCCCCACCCCACCCCCGCCGCCCGGGAGGAGCCACCTCCCACCCGTGACGAGACGGCTTCAACCCCTCGCCCGCCGCTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGGCGGCGAGCTTCTCCGACTCCGGCGACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATTGATTGATTGATGGATTGATTGGCCGGGATATGCTGATACCATTGAGAGGAATTGTTGACCGATTGATTCCTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF324401             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCAGTATATGCAGCAGCGCGAGCAAACCTCACAAGTCGAATGATTCAAGGTGGGAAGCGATACAGATGGTCCGAACCAAAGAAGGTTCGCTGGGGTTAGGCCATTTCAGGCTACTTAAGAGGCTTGGTTGTGGTGACATTGGCAGTGTTTATTTGTCGGAGCTTAGTGGAACAAAGTGCTACTTCGCTATGAAGATTATGGACAAGGGCGTCTCTAGCGAGCCGCAAAAAGCTACTGAGAGCCCAGACTGAAAGGGAGATATTGCAGTGCCTGGACCATCCTTTTTTGCCAACATTGTACACTCATTTTGAGACTGATAAGTTCTCATGCCTANGTAATGGAGTTTTGCCCTGGAGGAGACCTGCACACCCTAAGGCAAAAGCAACCGGGGAAGTTTTTTCCGGAACAAGCTGCCAAGTTTTATGTGGCTGAGGTGCTTCTTGCTCTAG ATACCTGCATATGCTTGGCATCATATATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB643769             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCTTATTGTGTACAGCCAGTGTGCATCGAGCCAGCTTGTATCCAACCCTCTTGTGTTACAACGACCACATGCTTCGCTCCACGCTTTTTCTCCTCCAAATCCAAAAAGGAGAAGAAGGCAAAAACAGACATTGCAAGTCAGGTCAGACCACTTCCTGAGCTTGTTGCAGAACCTACAGATGCAAGATCGATGTCATTTGTTGGCACCCATGAGTACTTGGCACCTGAGATTATAAAGGGTGAGGGGCATGGAAGTGCTGTCGACTGGTGGACTTTTGGCATATTCTTGTATGAACTTCTTTTTGGCAAGACACCTTTCAAAGGTTCAGGGAATAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTTCCCAGAATCACCTGTTGTGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACATCGTTTGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACTGGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGTCAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTG CAAGTTGTAAAGTTCTTTTCTTTTTCCTAGACCTTTTCTGGATTAAGGTAACTTGATATTCAGTTGGCCTATGCTCCCAccctaaaag                                                                                                                                          ]
[+] EMBL BQ906102             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCTTTCAAAGGTTCAGGGAATAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTTCCCAGAATCACCTGTTGTGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACATCGTTTGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTG AGGTGTTAACTGGGCCTTGATAAGGTGTGCGACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGTCAGTAGCCTCAACAAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTANGTGCCAAGTTGTAAAGTTCTNTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTGGATATTCAGTTGCCCTATGCTCCCATTTCTGTTCTTAAAAAAa                                                                                                                                 ]
[+] EMBL C97780               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cgGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACTGGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGTCAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTG CAAGTTGTAAAGTTCTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGATATTCAGTTGGCCTATGCTCCCATTTCTGTTCTTAAAAAA                                                                                                                                  ]
[+] EMBL C22455               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cgGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACTGGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGTCAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTG CAAGTTGTAAAGTTCTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGATATTCAGTTGGCCTATGCTCCCATTTCTGTTCTTAAAAAA                                                                                                                                  ]




>consensus_13535#0
CTAAATAAAAAAACAACAGAAAAAAAAGAAAACGACGGCGTCTTCACTCCTCTCCAGTCT
GCGCCACCACGTCCGCGTCCATCCGCCACTGCCGCACCTCCATCCGCGCGCCGCCCCTCC
TCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCCGCCCCCTCCCCACCCCACCCCG
GCCGCCCGGGAGGAGCCACCTCCCACCCGTGACGAGACGGCTTCAACCCCTCGCCCGCCG
CTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGGCGGCGAGCTTCTCCGACTCCGGC
GACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATTGATTGATTGATGGATTGATTGGC
CGGGATATGCTGATACCATTGAGAGGAATTGTTGACTGATTGATTCCTACCTGGTGATGG
CTTCCAAGGCTGTTCCTGATGTAGTCACCGACAAGAAATGCGATAAAACCATGGCGGCAT
CCTCTGAAATGTCGCAATCCCAAGAAGTTATTTCGAGAGGGGGTAAACTTGGGACTGCTT
CATCCAGAGAGACTCTGCTGGGGGATGTAGCCACGTCCAGTGGGGTGAAAGAACAAGATA
AGGATAGCTGTTCTGTTGATGAATCTGTGAAGCTGGATGGCAATGAAGATGCTGAGAAAA
GCTCGTTGCGCGGCAGCGTTAAGGATAGCTCGGCTTCTGCCAAAGGCAGCGACAGGGCAA
GCAGCCTGACAAAGGTGAGTGGCAGCACGAAGGTGAGCGACCATGCTGCTGACATTGTTG
GGAGCAGCAAGAGCAGTGTTTATCGAGCCAGTGCTGGCAGTGATGTGAGTGATGAGAGCA
CCTGCAGCAGTATATGCAGCAGCGCGAGCAAACCTCACAAGTCGAATGATTCAAGGTGGG
AAGCGATACAGATGGTCCGAACCAAAGAAGGTTCGCTGGGGTTAGGCCATTTCAGGCTAC
TTAAGAGGCTTGGTTGTGGTGACATTGGCAGTGTTTATTTGTCGGAGCTTAGTGGAACAA
AGTGCTACTTCGCTATGAAGATTATGGACAAGGCGTCTCTAGCGAGCCGCAAAAAGCTAC
TGAGAGCCCAGACTGAAAGGGAGATATTGCAGTGCCTGGACCATCCTTTTTTGCCAACAT
TGTACACTCATTTTGAGACTGATAAGTTCTCATGCCTAGTAATGGAGTTTTGCCCTGGAG
GAGACCTGCACACCCTAAGGCAAAAGCAACCGGGGAAGTTTTTTCCGGAACAAGCTGCCA
AGTTTTATGTGGCTGAGGTGCTTCTTGCTCTAGAATACCTGCATATGCTTGGCATCATAT
ATCGGGACCTTAAGCCAGAAAATGTTCTTGTGAGAGAAGATGGCCACATCATGCTGTCTG
ATTTTGATTTGTCCCTAAGATGTGCTGTGAGCCCTACCCTTCTGAAATCCTCAAACCCTG
GGGTAGATCCAAACCAAAAGGGTAATCCATCTTATTGTGTACAGCCAGTGTGCATCGAGC
CAGCTTGTATCCAACCCTCTTGTGTTACAACGACCACATGCTTCGCTCCACGCTTTTTCT
CCTCCAAATCCAAAAAGGAGAAGAAGGCAAAAACAGACATTGCAAGTCAGGTCAGACCAC
TTCCTGAGCTTGTTGCAGAACCTACAGATGCAAGATCGATGTCATTTGTTGGCACCCATG
AGTACTTGGCACCTGAGACTATAAAGGGTGAGGGGCATGGAAGTGCTGTCGACTGGTGGA
CTTTTGGCATATTCTTGTATGAACTTCTTTTTGGCAAGACACCTTTCAAAGGTTCAGGGA
ATAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTTCCCAGAATCACCTGTTG
TGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACATCGTT
TGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACT
GGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGT
CAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATC
TTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTGCAAGTTGTAAAGTT
CTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGATATTCAGTTGGCCTATGC
TCCCATTTCTGTTCTTAAAAAACTTTTGCATTTCGTGGACCTCCATCAATCGCATTAGAT
TAGATGGGAGACCTTTCTGTTTAGAACCTGTAATCCTCCTTTTTTTTTTTCACTGAGCAT
TAGGTTTCCTTGAACAACAAATAAATAATTTC

consensusID : consensus_13535#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence 
                              [TGAAGGAGTAGAAAGAGAGCCCAGACTGAAAGGGAGATATTGCAGTGCCTGGACCATCCTTTTTTGCCAACATTGTACACTCATTTTGAGACTGATAAGTTCTCATGCCTAGCAATGGAGTTTTGCCCTGGAGGAGACCTGCACACCCTAAGGCAAAAGCAACCGGGGAAGTTTTTTCCGGAACAAGCTGCCAAGTTTTATGTGGCTGAGGTGCTTCTTGCTCTAGAATACCTGCATATGCTTGGCATCATATATCGGGACCTTAAGCCAGAAAATGTTCTTGTGAGAGAAGATGGCCACATCATGCTGTCTGATTTTGATTTGTCCCTAAGATGTGCTGTGAGCCCTACCCTTCTGAAATCCTCAAACCCTGGGGTAGATCCAAACCAAAAGGGTAATCCATCTTATTGTGTACAGCCAGTGTGCATCGAGCCAGCTTGTATCCAACCCTCTTGTGTTACAACGACCACATGCTTCGCTCCACGCTTTTTCTCCTCCAAATCCAAAAAGGAGAAGAAGGCAAAAACAGACATTGCAAGTCAGGTCAGACCACTTCCTGAGCTTGTTGCAGAACCTACAGATGCAAGATCGATGTCATTTGTTGGCACCCATGAGTACTTGGCACCTGAGATTATAAAGGGTGAGGGGATTGGAAGTGCTGTCGACTGGTGGACTTTTGGCATATTCTTGT]

[+] EMBL CF310584             [TGAAGGAGTAGAAAGAGAGCCCAGACTGAAAGGGAGATATTGCAGTGCCTGGACCATCCTTTTTTGCCAACATTGTACACTCATTTTGAGACTGATAAGTTCTCATGCCTAGCAATGGAGTTTTGCCCTGGAGGAGACCTGCACACCCTAAGGCAAAAGCAACCGGGGAAGTTTTTTCCGGAACAAGCTGCCAAGTTTTATGTGGCTGAGGTGCTTCTTGCTCTAGAATACCTGCATATGCTTGGCATCATATATCGGGACCTTAAGCCAGAAAATGTTCTTGTGAGAGAAGATGGCCACATCATGCTGTCTGATTTTGATTTGTCCCTAAGATGTGCTGTGAGCCCTACCCTTCTGAAATCCTCAAACCCTGGGGTAGATCCAAACCAAAAGGGTAATCCATCTTATTGTGTACAGCCAGTGTGCATCGAGCCAGCTTGTATCCAACCCTCTTGTGTTACAACGACCACATGCTTCGCTCCACGCTTTTTCTCCTCCAAATCCAAAAAGGAGAAGAAGGCAAAAACAGACATTGCAAGTCAGGTCAGACCACTTCCTGAGCTTGTTGCAGAACCTACAGATGCAAGATCGATGTCATTTGTTGGCACCCATGAGTACTTGGCACCTGAGATTATAAAGGGTGAGGGGATTGGAAGTGCTGTCGACTGGTGGACTTTTGGCATATTCTTGT]




>consensus_13535#1
TGAAGGAGTAGAAAGAGAGCCCAGACTGAAAGGGAGATATTGCAGTGCCTGGACCATCCT
TTTTTGCCAACATTGTACACTCATTTTGAGACTGATAAGTTCTCATGCCTAGCAATGGAG
TTTTGCCCTGGAGGAGACCTGCACACCCTAAGGCAAAAGCAACCGGGGAAGTTTTTTCCG
GAACAAGCTGCCAAGTTTTATGTGGCTGAGGTGCTTCTTGCTCTAGAATACCTGCATATG
CTTGGCATCATATATCGGGACCTTAAGCCAGAAAATGTTCTTGTGAGAGAAGATGGCCAC
ATCATGCTGTCTGATTTTGATTTGTCCCTAAGATGTGCTGTGAGCCCTACCCTTCTGAAA
TCCTCAAACCCTGGGGTAGATCCAAACCAAAAGGGTAATCCATCTTATTGTGTACAGCCA
GTGTGCATCGAGCCAGCTTGTATCCAACCCTCTTGTGTTACAACGACCACATGCTTCGCT
CCACGCTTTTTCTCCTCCAAATCCAAAAAGGAGAAGAAGGCAAAAACAGACATTGCAAGT
CAGGTCAGACCACTTCCTGAGCTTGTTGCAGAACCTACAGATGCAAGATCGATGTCATTT
GTTGGCACCCATGAGTACTTGGCACCTGAGATTATAAAGGGTGAGGGGATTGGAAGTGCT
GTCGACTGGTGGACTTTTGGCATATTCTTGT

consensusID : consensus_13535#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 667
fasta sequence 
                              [GCGCCACCACGTCCGCGTCCATCCGCCACTGCCGCACCTCCATCCGCGCGCCGCCCCTCCTCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCCGCCCCCTCCCCACCCCACCCCCGCCGCCCGGGAGGAGCCACCTCCCACCCGTGACGAGACGGCTTCAACCCCTCGCCCGCCGCTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGGCGGCGAGCTTCTCCGACTCCGGCGACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATTGATTGATTGATGGATTGATTGGCCGGGATATGCTGATACCATTGAGAGGAATTGTTGACTGATTGATTCCTACCTGGTGATGGCTTCCAAGGCTGTTCCTGATGTAGTCACCGACAAGAAATGCGATAAAACCATGGCGGCATCCTCTGAAATGTCGCAATCCCAAGAAGTTATTTCGAGAGGGGGTAAACTTGGGACTGCTTCATCCAGAGAGACTCTGCTGGGGGATGTAGCCACGTCCAGTGGGGTGAAAGAACAAGATAAGGATAGCTCGGCTTCTGCCAAAGGCAGCGACAGGGCAAGCACCCTGACAAAGGTGAGTGGCAGCACGAAGGTGAGCGACCATGCTGCTGACATTGTTGGGAGCAACCAGAGCAGTGTTTATCGAGC]

[+] EMBL CB643768             [GCGCCACCACGTCCGCGTCCATCCGCCACTGCCGCACCTCCATCCGCGCGCCGCCCCTCCTCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCCGCCCCCTCCCCACCCCACCCCCGCCGCCCGGGAGGAGCCACCTCCCACCCGTGACGAGACGGCTTCAACCCCTCGCCCGCCGCTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGGCGGCGAGCTTCTCCGACTCCGGCGACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATTGATTGATTGATGGATTGATTGGCCGGGATATGCTGATACCATTGAGAGGAATTGTTGACTGATTGATTCCTACCTGGTGATGGCTTCCAAGGCTGTTCCTGATGTAGTCACCGACAAGAAATGCGATAAAACCATGGCGGCATCCTCTGAAATGTCGCAATCCCAAGAAGTTATTTCGAGAGGGGGTAAACTTGGGACTGCTTCATCCAGAGAGACTCTGCTGGGGGATGTAGCCACGTCCAGTGGGGTGAAAGAACAAGATAAGGATAGCTCGGCTTCTGCCAAAGGCAGCGACAGGGCAAGCACCCTGACAAAGGTGAGTGGCAGCACGAAGGTGAGCGACCATGCTGCTGACATTGTTGGGAGCAACCAGAGCAGTGTTTATCGAGC]
[+] EMBL CA752644             [                   CATCCGCCACTGCCGCACCTCCATCCACGCGCCGCCCCTCCTCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCCGCCCCCTCCCCACCCCACCCCCGCCGCCCGGGAGGAGCCACCTCCCACCCGTGACGAGACGGCTTCAACCCCTCGCCCGCCGCTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGGCGGCGAGCTTCTCCGACTCCGGCGACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATTGATTGATTGATGGATTGATTGGCCGGGATATGCTGATACCATTGAGAGGAATTGTTGACTGATTGATTCCTACCTGGTGATGGCTTCCAAGGCTGTTCCT                                                                                                                                                                                                                                                                                                  ]




>consensus_13535#2
GCGCCACCACGTCCGCGTCCATCCGCCACTGCCGCACCTCCATCCGCGCGCCGCCCCTCC
TCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCCGCCCCCTCCCCACCCCACCCCC
GCCGCCCGGGAGGAGCCACCTCCCACCCGTGACGAGACGGCTTCAACCCCTCGCCCGCCG
CTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGGCGGCGAGCTTCTCCGACTCCGGC
GACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATTGATTGATTGATGGATTGATTGGC
CGGGATATGCTGATACCATTGAGAGGAATTGTTGACTGATTGATTCCTACCTGGTGATGG
CTTCCAAGGCTGTTCCTGATGTAGTCACCGACAAGAAATGCGATAAAACCATGGCGGCAT
CCTCTGAAATGTCGCAATCCCAAGAAGTTATTTCGAGAGGGGGTAAACTTGGGACTGCTT
CATCCAGAGAGACTCTGCTGGGGGATGTAGCCACGTCCAGTGGGGTGAAAGAACAAGATA
AGGATAGCTCGGCTTCTGCCAAAGGCAGCGACAGGGCAAGCACCCTGACAAAGGTGAGTG
GCAGCACGAAGGTGAGCGACCATGCTGCTGACATTGTTGGGAGCAACCAGAGCAGTGTTT
ATCGAGC

consensusID : consensus_13535#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 429
fasta sequence 
                              [ATAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTTCCCAGAATCACCTGTTGTGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACA-TCGTTTGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACTGGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGTCAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTGCAAGTTGTAAAGTTCTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGATATTCAGTTGGCCTTNNNNAAAAAAAA]

[+] EMBL CF311151             [ATAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTTCCCAGAATCACCTGTTGTGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACA TCGTTTGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACTGGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGTCAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTGCAAGTTGTAAAGTTCTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGATATTCAGTTGGCCTTNNNNAAAAAAA ]
[-] EMBL CF311150             [ TAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTTCCCAGAATCACCTGTTGTGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACATTCGTTTGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACTGGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGTCAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTGCAAGTTGTAAAGTTCTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGATATTCAGTTGGCCTAAAAAAAAAAAAA]




>consensus_13535#3
ATAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTTCCCAGAATCACCTGTTG
TGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACATCGTT
TGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACT
GGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCCAGTTGAGATCCCTAGGT
CAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTCAGACAATTATC
TTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTGCAAGTTGTAAAGTT
CTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGATATTCAGTTGGCCTTNNN
NAAAAAAAA

consensusID : consensus_13535#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 140
fasta sequence 
                              [GACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTACAAGTTGTAAAGTTCTTTTCTTTTTCCAAGCCCTTTTTTGGATTCTTATAACTTAAAATACAGCCGCCCCTAAAAAAAAAAAAA]

[-] EMBL CF310585             [GACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTACAAGTTGTAAAGTTCTTTTCTTTTTCCAAGCCCTTTTTTGGATTCTTATAACTTAAAATACAGCCGCCCCTAAAAAAAAAAAAA]




>consensus_13535#4
GACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTATGTACAAG
TTGTAAAGTTCTTTTCTTTTTCCAAGCCCTTTTTTGGATTCTTATAACTTAAAATACAGC
CGCCCCTAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      CTAAATAAAAAAACAACAGAAAAAAAAGAAAACGACGGCGTCTTCACTCCTCTCCAGTCT 60
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      GCGCCACCACGTCCGCGTCCATCCGCCACTGCCGCACCTCCATCCGCGCGCCGCCCCTCC 120
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      TCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCCGCCCCCTCCCCACCCCACCCCG 180
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      GCCGCCCGGGAGGAGCCACCTCCCACCCGTGACGAGACGGCTTCAACCCCTCGCCCGCCG 240
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      CTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGGCGGCGAGCTTCTCCGACTCCGGC 300
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      GACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATTGATTGATTGATGGATTGATTGGC 360
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      CGGGATATGCTGATACCATTGAGAGGAATTGTTGACTGATTGATTCCTACCTGGTGATGG 420
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      CTTCCAAGGCTGTTCCTGATGTAGTCACCGACAAGAAATGCGATAAAACCATGGCGGCAT 480
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      CCTCTGAAATGTCGCAATCCCAAGAAGTTATTTCGAGAGGGGGTAAACTTGGGACTGCTT 540
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      CATCCAGAGAGACTCTGCTGGGGGATGTAGCCACGTCCAGTGGGGTGAAAGAACAAGATA 600
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      AGGATAGCTGTTCTGTTGATGAATCTGTGAAGCTGGATGGCAATGAAGATGCTGAGAAAA 660
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      GCTCGTTGCGCGGCAGCGTTAAGGATAGCTCGGCTTCTGCCAAAGGCAGCGACAGGGCAA 720
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      GCAGCCTGACAAAGGTGAGTGGCAGCACGAAGGTGAGCGACCATGCTGCTGACATTGTTG 780
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      GGAGCAGCAAGAGCAGTGTTTATCGAGCCAGTGCTGGCAGTGATGTGAGTGATGAGAGCA 840
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      CCTGCAGCAGTATATGCAGCAGCGCGAGCAAACCTCACAAGTCGAATGATTCAAGGTGGG 900
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      AAGCGATACAGATGGTCCGAACCAAAGAAGGTTCGCTGGGGTTAGGCCATTTCAGGCTAC 960
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      TTAAGAGGCTTGGTTGTGGTGACATTGGCAGTGTTTATTTGTCGGAGCTTAGTGGAACAA 1020
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      -----------------------------------------------TGAAGGAGTAGAA 13
consensus_13535#0      AGTGCTACTTCGCTATGAAGATTATGGACAAGGCGTCTCTAGCGAGCCGCAAAAAGCTAC 1080
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      AGAGAGCCCAGACTGAAAGGGAGATATTGCAGTGCCTGGACCATCCTTTTTTGCCAACAT 73
consensus_13535#0      TGAGAGCCCAGACTGAAAGGGAGATATTGCAGTGCCTGGACCATCCTTTTTTGCCAACAT 1140
consensus_13535#2      ----------------------GCGCCACCACGTCCGCGTCCATCCGCCACTGCCGCACC 38
                                                                                   

consensus_13535#3      -----------------------------------------ATAGAGCAACATTGTTCAA 19
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      TGTACACTCATTTTGAGACTGATAAGTTCTCATGCCTAGCAATGGAGTTTTGCCCTGGAG 133
consensus_13535#0      TGTACACTCATTTTGAGACTGATAAGTTCTCATGCCTAGTAATGGAGTTTTGCCCTGGAG 1200
consensus_13535#2      TCCATCCGCGCGCCGCCCCTCCTCCCTCCCGGGACGGCCTCTACCCTCGCCGCCGCCGCC 98
                                                                                   

consensus_13535#3      TGTTGTCGGACAGTCC----CTAAGGTTCCCAGAATCACCTGTTGTGAGTTTTGCTGCAA 75
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      GAGACCTGCACACCCTAAGGCAAAAGCAACCGGGGAAGTTTTTTCCGGAACAAGCTGCCA 193
consensus_13535#0      GAGACCTGCACACCCTAAGGCAAAAGCAACCGGGGAAGTTTTTTCCGGAACAAGCTGCCA 1260
consensus_13535#2      GCCCCCTCCCCACCCCACCCCCGCCGC-CCGGGAGGAGCCACCTCCCACCCGTGACGAGA 157
                                                                                   

consensus_13535#3      AGGACCTTATTCGGGGTTTGCTTATTAAGGAACCACAACATCGTTTGGCTTATAAGCGTG 135
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      AGTTTTATGTGGCTGAGGTGCTTCTTGCTCTAGAATACCTGCATATG-CTTGGCATCATA 252
consensus_13535#0      AGTTTTATGTGGCTGAGGTGCTTCTTGCTCTAGAATACCTGCATATG-CTTGGCATCATA 1319
consensus_13535#2      CGGCTTCAACCCCTCGCCCGCCGCTTCTTCCCCCGGGAAGGGCGGTGCCCGCGTCGCCGG 217
                                                                                   

consensus_13535#3      GAGCGACAGAAATAAAGCAACATCCCTTTTTTGAAGGTGTTAACTGGGCCTTGATAAGGT 195
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      TATCGG--GACCTTAAGCCAGAAAATGTTCTTGTGAGAG--AAGATGGCCACATCATGCT 308
consensus_13535#0      TATCGG--GACCTTAAGCCAGAAAATGTTCTTGTGAGAG--AAGATGGCCACATCATGCT 1375
consensus_13535#2      CGGCGAGCTTCTCCGACTCCGGCGACTGATTCGTCAGAACGTTCCGGTTCCTGATTGATT 277
                                                                                   

consensus_13535#3      GTGCAACT--CCTCCAGATATTCCCAAGCCAGTTGAGATCCCT---AGGTCAGTAGCCTC 250
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      GTCTGATT--TTGATTTGT-CCCTAAGATGTGCTGTGAGCCCT---ACCCTTCTGAAATC 362
consensus_13535#0      GTCTGATT--TTGATTTGT-CCCTAAGATGTGCTGTGAGCCCT---ACCCTTCTGAAATC 1429
consensus_13535#2      GATTGATTGATGGATTGATTGGCCGGGATATGCTGATACCATTGAGAGGAATTGTTGACT 337
                                                                                   

consensus_13535#3      AACCAGTCAAAAGGCTACAACAACTGCTGAGAAAGGTTC--AGACAATTATCTTGAATTC 308
consensus_13535#4      ------------------------------------------GACAATTATCTTGAATTC 18
consensus_13535#1      CTCAAACCCTGGGGTAGATCCAAACCAAAAGGGTAATCC--ATCTTATTGTGTACAGCCA 420
consensus_13535#0      CTCAAACCCTGGGGTAGATCCAAACCAAAAGGGTAATCC--ATCTTATTGTGTACAGCCA 1487
consensus_13535#2      GATTGATTCCTACCTGGTGATGGCTTCCAAGGCTGTTCCTGATGTAGTCACCGACAAGAA 397
                                                                      *       *    

consensus_13535#3      GATTTCTTTTAGTGGAGTCTTATAAAATCAT-TTATGTGCAAGTTGTAAAGTTCTTTTCT 367
consensus_13535#4      GATTTCTTTTAGTGGAGTCTTATAAAATCAT-TTATGTACAAGTTGTAAAGTTCTTTTCT 77
consensus_13535#1      GTGTGCATCGAGCCAGCTTGTATCCAACCCTCTTGTGTTACAACGACCACATGCTTCGCT 480
consensus_13535#0      GTGTGCATCGAGCCAGCTTGTATCCAACCCTCTTGTGTTACAACGACCACATGCTTCGCT 1547
consensus_13535#2      ATGCGATAAAACCATGGCGGCATCCTCTGAAATGTCGCAATCCCAAGAAGTTATTTCGAG 457
                                 *          **         *   *           *  *  **    

consensus_13535#3      TTTTCCTAGACCT----TTTCTGGATTCTTATAACTTGATAT----TCAGTTGGCCTTNN 419
consensus_13535#4      TTTTCCAAGCCCT----TTTTTGGATTCTTATAACTTAAAAT----ACAGCCGCCCCTAA 129
consensus_13535#1      CCACGCTTTTTCT----CCTCCAAATCCAAAAAGGAGAAGAAGGCAAAAACAGACATTGC 536
consensus_13535#0      CCACGCTTTTTCT----CCTCCAAATCCAAAAAGGAGAAGAAGGCAAAAACAGACATTGC 1603
consensus_13535#2      AGGGGGTAAACTTGGGACTGCTTCATCCAGAGAGACTCTGCTGGGGGATGTAGCCACGTC 517
                                   *           ** *  * *                   * *     

consensus_13535#3      NNAAAAAAAA-------------------------------------------------- 429
consensus_13535#4      AAAAAAAAAAA------------------------------------------------- 140
consensus_13535#1      AAGTCAGGTCAGACCACTTCCTGAGCTTGTTGCAGAACCTACAGATGCAAGATCGATGTC 596
consensus_13535#0      AAGTCAGGTCAGACCACTTCCTGAGCTTGTTGCAGAACCTACAGATGCAAGATCGATGTC 1663
consensus_13535#2      CAGTGGGGTGAAAGAACAAGATAAGGATAGCTCGGCTTCTGCCAAAGGCAGCGACAGGGC 577
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ATTTGTTGGCACCCATGAGTACTTGGCACCTGAGATTATAAAGGGTGAGGGGATTGGAAG 656
consensus_13535#0      ATTTGTTGGCACCCATGAGTACTTGGCACCTGAGACTATAAAGGGTGAGGGGCATGGAAG 1723
consensus_13535#2      AAGCACCCTGACAAAGGTGAGTGGCAGCACGAAGGTGAGCGACCATGCTGCTGACATTGT 637
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      TGCTGTCGACTGGTGGACTTTTGGCATATTCTTGT------------------------- 691
consensus_13535#0      TGCTGTCGACTGGTGGACTTTTGGCATATTCTTGTATGAACTTCTTTTTGGCAAGACACC 1783
consensus_13535#2      TGGGAGCAACCAGAGCAGTGTTTATCGAGC------------------------------ 667
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      TTTCAAAGGTTCAGGGAATAGAGCAACATTGTTCAATGTTGTCGGACAGTCCCTAAGGTT 1843
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      CCCAGAATCACCTGTTGTGAGTTTTGCTGCAAAGGACCTTATTCGGGGTTTGCTTATTAA 1903
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      GGAACCACAACATCGTTTGGCTTATAAGCGTGGAGCGACAGAAATAAAGCAACATCCCTT 1963
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      TTTTGAAGGTGTTAACTGGGCCTTGATAAGGTGTGCAACTCCTCCAGATATTCCCAAGCC 2023
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      AGTTGAGATCCCTAGGTCAGTAGCCTCAACCAGTCAAAAGGCTACAACAACTGCTGAGAA 2083
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      AGGTTCAGACAATTATCTTGAATTCGATTTCTTTTAGTGGAGTCTTATAAAATCATTTAT 2143
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      GTGCAAGTTGTAAAGTTCTTTTCTTTTTCCTAGACCTTTTCTGGATTCTTATAACTTGAT 2203
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      ATTCAGTTGGCCTATGCTCCCATTTCTGTTCTTAAAAAACTTTTGCATTTCGTGGACCTC 2263
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      ------------------------------------------------------------
consensus_13535#4      ------------------------------------------------------------
consensus_13535#1      ------------------------------------------------------------
consensus_13535#0      CATCAATCGCATTAGATTAGATGGGAGACCTTTCTGTTTAGAACCTGTAATCCTCCTTTT 2323
consensus_13535#2      ------------------------------------------------------------
                                                                                   

consensus_13535#3      -------------------------------------------------
consensus_13535#4      -------------------------------------------------
consensus_13535#1      -------------------------------------------------
consensus_13535#0      TTTTTTTCACTGAGCATTAGGTTTCCTTGAACAACAAATAAATAATTTC 2372
consensus_13535#2      -------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)