These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13539#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1782 fasta sequence [AGATCCCCGAAATCAAACCCCTCCTCTTCTCTTCCCCTTCCTCCTGCGTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT-GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC-TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGATGATCTTTCTGGTATTTATCCTCCGATTTTGGTTTCTATAAAAAAAAAAAAAAAAAACTCGAGGCGGGGCCCGGTGCCCAAATCGGCCTATAGGGAAGTTTATCACCGCGCGCGTCCTGGGCGTGCGGTTAGACTCGTTGGACTGGGAAAAACCCGGCGATGCCCAACTTAGCTCTCGTGAGAAATGACCACCTTGCGCAGTCTGAGTGATAGTGAAGAAGGCCGGCACGTTCGCCCTGCCAACGGGTGACCATCTTATATGCGATGGTCCCGCCCAGANCG] [+] EMBL AK062107 [AGATCCCCGAAATCAAACCCCTCCTCTTCTCTTCCCCTTCCTCCTGCGTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGCTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGATGATCTTTCTGGT ] [+] EMBL AK099088 [ CCTCTTCTCTTCCCCTTCCTCCTGCGTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACTATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGATGATCTTTCTGGTATTTATCCTCCGATTTTGGTTTCTATA ] [+] EMBL CB677908 [ GCGTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTT ] [-] EMBL CB677909 [ TATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGAAAAGGTTTCTGGTATTTATCCTCCGATTTTGGTTTCT ] [+] EMBL CA767578 [ TTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCATCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGTTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTT ] [+] EMBL BE040468 [ ACACAGTGGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTAGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTAGTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTAGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACATTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTGACCAATGAATGGTCCCAACGTCGCTAGGCACAGTG ATGGTGATTAGGACGATATTGCTGGTATGTATCCTCCGATTGTGGTTTCTGAAAAAAAAAAAAAAAAAAACTCGAGGCGGGGCCCGGTGCCCAAATCGGCCTATAGGGAAGTTTATCACCGCGCGCGTCCTGGGCGTGCGGTTAGACTCGTTGGACTGGGAAAAACCCGGCGATGCCCAACTTAGCTCTCGTGAGAAATGACCACCTTGCGCAGTCTGAGTGATAGTGAAGAAGGCCGGCACGTTCGCCCTGCCAACGGGTGACCATCTTATATGCGATGGTCCCGCCCAGANCG] [+] EMBL BI808813 [ AGAGGAGTCTCCACT GCTAAGGTAACTCGGGATAGCTC AAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTC AAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCC TTGTGAAGGTGCGTGGTCTACGTTAAGATAACC ATTACCTTGGCCCcaaaaaa ] consensusID : consensus_13539#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1360 fasta sequence [GTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAATGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTG-CGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAAAAAAAAAAAAAAA] [+] EMBL AF072849 [GTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAATGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTG CGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAAAAAAAAAAAAAAA] [+] EMBL CA999423 [ TGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCAT ] [+] EMBL AA749875 [ GTCTCATGTCACAGGTCATTAAGGATATCCTCTTGAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAG NCACCAGATTCATCCGGGCCTGAG CTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGC ] [+] EMBL AU093614 [ TTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAG TGCCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAAaaaaaaa ] consensusID : consensus_13539#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1248 fasta sequence [CCGCTCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGAAAAAAAAAAA] [+] EMBL AB055495 [CCGCTCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGAAAAAAAAAAA] [+] EMBL CF306678 [ GCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCANATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCAT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13539#0 AGATCCCCGAAATCAAACCCCTCCTCTTCTCTTCCCCTTCCTCCTGCGTTCTAGGGTTTT 60 consensus_13539#1 -----------------------------------------------GTTCTAGGGTTTT 13 consensus_13539#2 ------------------------------------------------------------ consensus_13539#0 GCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCA 120 consensus_13539#1 GCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCA 73 consensus_13539#2 ---------------CCGCTCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCA 45 * **************************************** consensus_13539#0 CCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGG 180 consensus_13539#1 CCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGG 133 consensus_13539#2 CCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGG 105 ************************************************************ consensus_13539#0 CCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGG 240 consensus_13539#1 CCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGG 193 consensus_13539#2 CCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGG 165 ************************************************************ consensus_13539#0 TGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCG 300 consensus_13539#1 TGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCG 253 consensus_13539#2 TGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCG 225 ************************************************************ consensus_13539#0 CCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGG 360 consensus_13539#1 CCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGG 313 consensus_13539#2 CCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGG 285 ************************************************************ consensus_13539#0 GCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCC 420 consensus_13539#1 GCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCC 373 consensus_13539#2 GCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCC 345 ************************************************************ consensus_13539#0 CCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCG 480 consensus_13539#1 CCGTCGAGGGCACCGAGACCAGGGTCAATGCCCAGGCCGACGCCTACGAGTATATGGTCG 433 consensus_13539#2 CCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCG 405 **************************** ******************************* consensus_13539#0 AGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACT 540 consensus_13539#1 AGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACT 493 consensus_13539#2 AGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACT 465 ************************************************************ consensus_13539#0 CACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATC 600 consensus_13539#1 CACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATC 553 consensus_13539#2 CACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATC 525 ************************************************************ consensus_13539#0 AGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTG 660 consensus_13539#1 AGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTG 613 consensus_13539#2 AGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTG 585 ************************************************************ consensus_13539#0 GTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAAC 720 consensus_13539#1 GTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAAC 673 consensus_13539#2 GTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAAC 645 ************************************************************ consensus_13539#0 CTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCA 780 consensus_13539#1 CTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCA 733 consensus_13539#2 CTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCA 705 ************************************************************ consensus_13539#0 AACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTG 840 consensus_13539#1 AACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTG 793 consensus_13539#2 AACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTG 765 ************************************************************ consensus_13539#0 ATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACA 900 consensus_13539#1 ATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACA 853 consensus_13539#2 ATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACA 825 ************************************************************ consensus_13539#0 GGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTC 960 consensus_13539#1 GGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTC 913 consensus_13539#2 GGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTC 885 ************************************************************ consensus_13539#0 AACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGG 1020 consensus_13539#1 AACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGG 973 consensus_13539#2 AACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGG 945 ************************************************************ consensus_13539#0 AGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATG 1080 consensus_13539#1 AGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATG 1033 consensus_13539#2 AGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATG 1005 ************************************************************ consensus_13539#0 GTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGG 1140 consensus_13539#1 GTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGG 1093 consensus_13539#2 GTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGG 1065 ************************************************************ consensus_13539#0 CAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCT 1200 consensus_13539#1 CAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCT 1153 consensus_13539#2 CAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCT 1125 ************************************************************ consensus_13539#0 ACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCT 1260 consensus_13539#1 ACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCT 1213 consensus_13539#2 ACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCT 1185 ************************************************************ consensus_13539#0 AGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCT 1320 consensus_13539#1 AGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCT 1273 consensus_13539#2 AGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGAAAAAAAA 1245 **************************************************** * consensus_13539#0 GCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGG 1380 consensus_13539#1 GCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGG 1333 consensus_13539#2 AAA--------------------------------------------------------- 1248 consensus_13539#0 CTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTAC 1440 consensus_13539#1 CTGCCATTGTGAAAAAAAAAAAAAAAA--------------------------------- 1360 consensus_13539#2 ------------------------------------------------------------ consensus_13539#0 CATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGA 1500 consensus_13539#1 ------------------------------------------------------------ consensus_13539#2 ------------------------------------------------------------ consensus_13539#0 TGATCTTTCTGGTATTTATCCTCCGATTTTGGTTTCTATAAAAAAAAAAAAAAAAAACTC 1560 consensus_13539#1 ------------------------------------------------------------ consensus_13539#2 ------------------------------------------------------------ consensus_13539#0 GAGGCGGGGCCCGGTGCCCAAATCGGCCTATAGGGAAGTTTATCACCGCGCGCGTCCTGG 1620 consensus_13539#1 ------------------------------------------------------------ consensus_13539#2 ------------------------------------------------------------ consensus_13539#0 GCGTGCGGTTAGACTCGTTGGACTGGGAAAAACCCGGCGATGCCCAACTTAGCTCTCGTG 1680 consensus_13539#1 ------------------------------------------------------------ consensus_13539#2 ------------------------------------------------------------ consensus_13539#0 AGAAATGACCACCTTGCGCAGTCTGAGTGATAGTGAAGAAGGCCGGCACGTTCGCCCTGC 1740 consensus_13539#1 ------------------------------------------------------------ consensus_13539#2 ------------------------------------------------------------ consensus_13539#0 CAACGGGTGACCATCTTATATGCGATGGTCCCGCCCAGANCG 1782 consensus_13539#1 ------------------------------------------ consensus_13539#2 ------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||