Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13551 cluster # 13551       Sequences # 13       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13551#0 length = 1612 sequences # 7  
consensus_13551#1 length = 1094 sequences # 4  
consensus_13551#2 length = 611 sequences # 1  
consensus_13551#3 length = 566 sequences # 1  

consensusID : consensus_13551#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1612
fasta sequence
                              [GAAATGATATCCATTTCCCACCCTCCTAATCCCATTAGCCATACGCAGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTTCTCGTTTCTCCTACCCTACAGGATGTTTAGATAATTCGAGACCCTAGCTTTGAACTTTGAGTAGGTTCAGTTCTTAGCTGTAGAAGATGAATGGTTCAAGTGGCTCCCAAGGACATAATGTCAATGGAGGACAGAAGAAAGTGCAGCATGCTAGCCCACTCACTCTGAACAATGGGTCAAAGCACCGTCCATTGACTCCCATGAGACGATGCCGCGGTGTAGCATGTGTGGTGATCATACTGTCAACAGCATTCACATTGATAGTTTTCATAGCCCCTATTACTACTTTCCTTGTTCGGCTAGTCAGCGTGCATTACAGTAGAAAGGCGACCTCTGTTCTGTTTGGAATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCAATGTGGTTTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACCACAGGACTGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAGGATATATCAAGTACATCCTTAAGAGCAGCTTGATGAAATTGCCTGTTTTTAGCT-GGGCATTTCACATTTTTGAGTTTATCCCAGTAGAACGGAAATGGGAGATTGATG-AAGCAATTATCCAGAACAAACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGCCGTTTTCCCTGAGGGCACTGATTATACTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGATATTTACTGTAGAAACCCTTGGCTTGTGCAATTAAAATCGTTCCTCTTTTGTTTTACTTCTGCAAGATGATTTAGTAAAAAAAAA]

[+] EMBL AK103516             [GAAATGATATCCATTTCCCACCCTCCTAATCCCATTAGCCATACGCAGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTGTGTTCTCGTTTCTCCTACCCTACAGGATGTTTAGATAATTCGAGACCCTAGCTTTGAACTTTGAGTAGGTTCAGTTCTTAGCTGTAGAAGATGAATGGTTCAAGTGGCTCCCAAGGACATAATGTCAATGGAGGACAGAAGAAAGTGCAGCATGCTAGCCCACTCACTCTGAACAATGGGTCAAAGCACCGTCCATTGACTCCCATGAGACGATGCCGCGGTGTAGCATGTGTGGTGATCATACTGTCAACAGCATTCACATTGATAGTTTTCATAGCCCCTATTACTACTTTCCTTGTTCGGCTAGTCAGCGTGCATTACAGTAGAAAGGCGACCTCTGTTCTGTTTGGAATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCAATGTGGTTTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACCACAGGACTGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAGGATATATCAAGTACATCCTTAAGAGCAGCTTGATGAAATTGCCTGTTTTTAGCT GGGCATTTCACATTTTTGAGTTTATCCCAGTAGAACGGAAATGGGAGATTGATG AAGCAATTATCCAGAACAAACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGCCGTTTTCCCTGAGGGCACTGATTATACTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGATATTTACTGTAGAAACCCTTGGCTTGTGCAATT                                                    ]
[+] EMBL CB683465             [                 CCACCCTCCTAATCCCATTAGCCATACGCAGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTTCTCGTTTCTCCTACCCTACAGGATGTTTAGATAATTCGAGACCCTAGCTTTGAACTTTGAGTAGGTTCAGTTCTTAGCTGTAGAAGATGAATGGTTCAAGTGGCTCCCAAGGACATAATGTCAATGGAGGACAGAAGAAAGTGCAGCATGCTAGCCCACTCACTCTGAACAATGGGTCAAAGCACCGTCCATTGACTCCCATGAGACGATGCCGCGGTGTAGCATGTGTGGTGATCATACTGTCAACAGCATTCACATTGATAGTTTTCATAGCCCCTATTACTACTTTCCTTGTTCGGCTAGTCAGCGTGCATTACAGTAGAAAGGCGACCTCTGTTCTGTTTGGAATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCAATGTGGTTTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACCACAGGACTGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAGGATATATCAAGTACATCCTTAAGAGCAGCTTGATGAAATTGCCTGTTTTTAGCT GGGCATTTCACATTTTTGAGTTTATCCCAGTAGAACGGAAATGGGAGATTGATGAAAGCATTTAT CAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB681740             [                   ACCCTCCTAATCCCATTAGCCATACGCAGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTTCTCGTTTCTCCTACCCTACAGGATGTTTAGATAATTCGAGACCCTAGCTTTGAACTTTGAGTAGGTTCAGTTCTTAGCTGTAGAAGATGAATGGTTCAAGTGGCTCCCAAGGACATAATGTCAATGGAGGACAGAAGAAAGTGCAGCATGCTAGCCCACTCACTCTGAACAATGGGTCAAAGCACCGTCCATTGACTCCCATGAGACGATGCCGCGGTGTAGCATGTGTGGTGATCATACTGTCAACAGCATTCACATTGATAGTTTTCATAGCCCCTATTACTACTTTCCTTGTTCGGCTAGTCAGCGTGCATTACAGTAGAAAGGCGACCTCTGTTCTGTTTGGAATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCAATGTGGTTTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACCACAGGACTGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAGGATATATCAAGTACATCCTTAAGAGCAGCTTGATGAAATTGCCTGTTTTTAGCT GGGCATTTCACATTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB681741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAATTGCCTGTTTTTAGCTGGGGCATTTCACATTTTTGAGTTTATCCCAGTAGAACGGAAATGGGAGATTGATG AAGCAATTATCCAGAACAAACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGCCGTTTTCCCTGAGGGCACTGATTATACTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAGGCTGTATATCTGCAAAAGATATTTACTGTAGAAAaaaaaga                                                               ]
[-] EMBL CB683852             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CT GGGCATTTCACATTTTTGAGTTTATCCCAGTAGAACGGAAATGGGAGATTGATG AAGCAATTATCCAGAACAAACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGCCGTTTTCCCTGAGGGCACTGATTATACTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAGACTGTATATCTGCAAAAGATATTTACTGTAGAAAtttaaaga                                                              ]
[-] EMBL CF278192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTAAG GAGGTACAAGGTCTATGTATTATTAAGATGCGCTTACCTTACATTTAAAACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGATATTTACTGTAAAAACCCTTGGCTTGTGCAAAAAAA                                                 ]
[-] EMBL CF318815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCA TTTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGATATTTACTGTAGAAACCCTTGGCTTGTGCAATTGTCATCGTTCCTCTTTTGTTTTACTTCTGCAAGATGATTTAGTAAAAAAAAA]


>consensus_13551#0 GAAATGATATCCATTTCCCACCCTCCTAATCCCATTAGCCATACGCAGCCCGAGTGTCTT CCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCG CCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCA GGCGAGAGGATTATGTTCTCGTTTCTCCTACCCTACAGGATGTTTAGATAATTCGAGACC CTAGCTTTGAACTTTGAGTAGGTTCAGTTCTTAGCTGTAGAAGATGAATGGTTCAAGTGG CTCCCAAGGACATAATGTCAATGGAGGACAGAAGAAAGTGCAGCATGCTAGCCCACTCAC TCTGAACAATGGGTCAAAGCACCGTCCATTGACTCCCATGAGACGATGCCGCGGTGTAGC ATGTGTGGTGATCATACTGTCAACAGCATTCACATTGATAGTTTTCATAGCCCCTATTAC TACTTTCCTTGTTCGGCTAGTCAGCGTGCATTACAGTAGAAAGGCGACCTCTGTTCTGTT TGGAATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCAATGTGGT TTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACCACAGGAC TGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAGGATATAT CAAGTACATCCTTAAGAGCAGCTTGATGAAATTGCCTGTTTTTAGCTGGGCATTTCACAT TTTTGAGTTTATCCCAGTAGAACGGAAATGGGAGATTGATGAAGCAATTATCCAGAACAA ACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGCCGTTTTCCCTGAGGGCAC TGATTATACTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCC TATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTT GAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGA TTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGT TAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTT CAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGG AACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTC GACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATT ATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGAT ATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTT GACTGGAAACTGTATATCTGCAAAAGATATTTACTGTAGAAACCCTTGGCTTGTGCAATT AAAATCGTTCCTCTTTTGTTTTACTTCTGCAAGATGATTTAGTAAAAAAAAA



consensusID : consensus_13551#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1094
fasta sequence
                              [AAAGGCTTGCGGTGGATACCTAGGTACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTGAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCTAATCCCATTAGCCATACGCAGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGATATTTTCTGTAGAAAAAAAAAA]

[+] EMBL AK104484             [AAAGGCTTGCGGTGGATACCTAGGTACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTGAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCTAATCCCATTAGCCATACGCAGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGA                      ]
[+] EMBL AK060870             [AAAGGCTTGCGGTGGATACCTAGGTACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTGAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCTAATCCCATTAGCCATACGCAGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGA                      ]
[+] EMBL CA762908             [                                                                                                                                                                                                                                                                                                                                  CTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATGTTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACATGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGATATTTTCTGTAGAAAAAAAAAA]
[-] EMBL BI305434             [                                                                                                                                                                                                                                                                                                                                                                                                                                            CGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGATATTTACTGTAGAAAccctt  ]


>consensus_13551#1 AAAGGCTTGCGGTGGATACCTAGGTACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAA ATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTT GAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAG TAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCA GCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCTAATCCCATTAGCCA TACGCAGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTC TCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCT CCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGAGTCAAG AATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGG GGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAA TAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTG AAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAG TAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCA TGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTG CTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGT CTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATT TCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGG TACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGATATTTTCT GTAGAAAAAAAAAA



consensusID : consensus_13551#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 611
fasta sequence
                              [TGGACTGAGGAGTGAAAAATCCCTTAGCCTACGCGGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATGNAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCATTTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGGATGTATCCACACCGGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTG]

[+] EMBL CF318816             [TGGACTGAGGAGTGAAAAATCCCTTAGCCTACGCGGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCTGGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATGNAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCATTTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGGATGTATCCACACCGGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTG]


>consensus_13551#2 TGGACTGAGGAGTGAAAAATCCCTTAGCCTACGCGGCCCGAGTGTCTTCCCCTTCCCTTT GTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTC GCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATT ATGTGAGAAGAAATGCATCAAGAGTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACT TAAAAATGTTCTTCTTCCAAAGACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAG CTCCCTAGATGCAGTTTATGATGTCACAATAGCGTATAAGCATCGCCTGCCAGATTTTCT GGATATTATATATGGCACCGATCCTTCTGAAGTCCACATCCACATCAGAACTGTTAAGCT CTGTGACATTCCAACGTCAGAAGATGAAGTAACCGATTGGATGATGNAGAGGTTCAGGCA GAAGGACCAGCTTCTGTCATTTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAA GGGGGATGTATCCACACCGGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAG GCTTCTTCTTG



consensusID : consensus_13551#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 566
fasta sequence
                              [TTCTGTTTGGAATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCAATGTGGTTTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACCACAGGACTGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAGGATATATCAAGTACATCCTTAAGAGCAGCTTGATGAAATTGCCTGTTTTTAGCTGGGCATTTCACATTTTTGAGTTTATCCCAGTAGAACGGAAATGGGAGATTGATGAAGCAATTATCCAGAACAAACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGCCGTTTTCCCTGAGGGCACTGATTATACGTAAGGCATATTTATCTTTAGAATTCATTAATATATTTTTAGTATGATCCACCTGCACTATCAGAATTTATATTCTTAATCACATATCTGTCGAACTTTCTAAGTTTTCAAATATACTGAACGCATTTTCCCCTGTCAATACTGCCTTTGAGAAACGGTTTCTCATTCTATTGAGTTATTGCCTATGTAT]

[+] EMBL CF307351             [TTCTGTTTGGAATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCAATGTGGTTTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACCACAGGACTGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAGGATATATCAAGTACATCCTTAAGAGCAGCTTGATGAAATTGCCTGTTTTTAGCTGGGCATTTCACATTTTTGAGTTTATCCCAGTAGAACGGAAATGGGAGATTGATGAAGCAATTATCCAGAACAAACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGCCGTTTTCCCTGAGGGCACTGATTATACGTAAGGCATATTTATCTTTAGAATTCATTAATATATTTTTAGTATGATCCACCTGCACTATCAGAATTTATATTCTTAATCACATATCTGTCGAACTTTCTAAGTTTTCAAATATACTGAACGCATTTTCCCCTGTCAATACTGCCTTTGAGAAACGGTTTCTCATTCTATTGAGTTATTGCCTATGTAT]


>consensus_13551#3 TTCTGTTTGGAATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCA ATGTGGTTTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACC ACAGGACTGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAG GATATATCAAGTACATCCTTAAGAGCAGCTTGATGAAATTGCCTGTTTTTAGCTGGGCAT TTCACATTTTTGAGTTTATCCCAGTAGAACGGAAATGGGAGATTGATGAAGCAATTATCC AGAACAAACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGCCGTTTTCCCTG AGGGCACTGATTATACGTAAGGCATATTTATCTTTAGAATTCATTAATATATTTTTAGTA TGATCCACCTGCACTATCAGAATTTATATTCTTAATCACATATCTGTCGAACTTTCTAAG TTTTCAAATATACTGAACGCATTTTCCCCTGTCAATACTGCCTTTGAGAAACGGTTTCTC ATTCTATTGAGTTATTGCCTATGTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13551#0      GAAATGATATCCATTTCCCACCCTCCTAATCCCATTAGCCATACGCAGCCCGAGTGTCTT 60
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ------------------------------------------------------------
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      CCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTCCCGTCTCCTCCGCTCCTTGCGCCG 120
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ------------------------------------------------------------
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      CCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCTCCATCTGGCGAGCAGAGCA 180
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ------------------------------------------------------------
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      GGCGAGAGGATTATGTTCTCGTTTCTCCTACCCTACAGGATGTTTAGATAATTCGAGACC 240
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ------------------------------------------------------------
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      CTAGCTTTGAACTTTGAGTAGGTTCAGTTCTTAGCTGTAGAAGATGAATGGTTCAAGTGG 300
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      -----AAAGGCTTGCGGTGGATACCTAGGTACCCAGAGACGAGGAAGGGCGTAGCAAGCG 55
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      CTCCCAAGGACATAATGTCAATGGAGGACAGAAGAAAGTGCAGCATGCTAGCCCACTCAC 360
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAAC 115
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      TCTGAACAATGGGTCAAAGCACCGTCCATTGACTCCCATGAGACGATGCCGCGGTGTAGC 420
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      CTTTTGAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACTGAAACAT 175
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      ATGTGTGGTGATCATACTGTCAACAGCATTCACATTGATAGTTTTCATAGCCCCTATTAC 480
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      CTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGG 235
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      TACTTTCCTTGTTCGGCTAGTCAGCGTGCATTACAGTAGAAAGGCGACCTCTGTTCTGTT 540
consensus_13551#3      -----------------------------------------------------TTCTGTT 7
consensus_13551#1      GAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCTAATCCCATT 295
consensus_13551#2      ---------------------------------TGGACTG-AGGAGTGAAAAATCCC-TT 25
                                                                            * *  **

consensus_13551#0      TGGA--ATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCAATGTG 598
consensus_13551#3      TGGA--ATGTGGCTATCTTTATGGCCATTCTTGTTTGAGAAGATCAACAAGACCAATGTG 65
consensus_13551#1      AGCCATACGCAGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTC 355
consensus_13551#2      AGCC-TACGCGGCCCGAGTGTCTTCCCCTTCCCTTTGTGGCGTAAAAGAAAGAAAATCTC 84
                        *    * *  **     *     **  *    **** *  *   ** **    *** * 

consensus_13551#0      --GTTTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACCACA 656
consensus_13551#3      --GTTTTCTCTGGTGAAAGTGTACTTCCAAAAAAGCGTGTCTTGTTATTTGCCAACCACA 123
consensus_13551#1      CCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGC 415
consensus_13551#2      CCGTCTCCTCCGCTCCTTGCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGCGGC 144
                         ** * *** * *    * *        *  *  ** * **    *   *     *   

consensus_13551#0      GGACTGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAGGAT 716
consensus_13551#3      GGACTGAGGTTGACTGGATGTATTTGTGGGATCTTGCATTGAGGAAAGGCTATTTAGGAT 183
consensus_13551#1      GATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGA- 474
consensus_13551#2      GATCTCCATCTGGCGAGCAGAGCAGGCGAGAGGATTATGTGAGAAGAAATGCATCAAGA- 203
                       *  **     ** *  *  *     * * **   *    **** * *      * * ** 

consensus_13551#0      ATATCAAGTACATCCTTAAGAGCA--GCTTGA-------TGAAATTGCCTGTTTTTAGCT 767
consensus_13551#3      ATATCAAGTACATCCTTAAGAGCA--GCTTGA-------TGAAATTGCCTGTTTTTAGCT 234
consensus_13551#1      --GTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAA 532
consensus_13551#2      --GTCAAGAATATGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAA 261
                          ***** * ** ***  *****  *  **        * *** **    * **     

consensus_13551#0      GGGCATTTCACATTTTTGA-GTTTATCCCAGTAGAACGGAA----ATGGGAGATTGATGA 822
consensus_13551#3      GGGCATTTCACATTTTTGA-GTTTATCCCAGTAGAACGGAA----ATGGGAGATTGATGA 289
consensus_13551#1      GACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGA 592
consensus_13551#2      GACAAAGGGGTTCCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAGATGCAGTTTATGA 321
                       *   *         ****  ****     *** ***  *      *   *   ** ****

consensus_13551#0      AGCAATTATCCAGAACAAACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGC 882
consensus_13551#3      AGCAATTATCCAGAACAAACTGTCAGCATTTAAGGACCCCAGAGACCCCCTCTGGTTGGC 349
consensus_13551#1      TGTCACAATAGCGTATAAGC-ATCGCCTGCCAGATTTTCTGGATATTATATATGGC--AC 649
consensus_13551#2      TGTCACAATAGCGTATAAGC-ATCGCCTGCCAGATTTTCTGGATATTATATATGGC--AC 378
                        *  *  **   * * ** *  **  *    *      *  ** *     * ***    *

consensus_13551#0      CGTTTTCCCTGAGGGCACTGATTATACTGAGAAGAAATGCATC---AAGAGTCAAGAATA 939
consensus_13551#3      CGTTTTCCCTGAGGGCACTGATTATACGTAAGGCATATTTATCTTTAGAATTCATTAATA 409
consensus_13551#1      CGATCCTTCTGAAGTCCACA--TCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACG 707
consensus_13551#2      CGATCCTTCTGAAGTCCACA--TCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACG 436
                       ** *    **** * *      *  **          *  * *      *      **  

consensus_13551#0      TGCTTCGGAGCATGGTCTGCCTATACTTAAAAATGTTCTTCTTCCAAAGACAAAGGGGTT 999
consensus_13551#3      TATTTTT-AGTATGATCCACCTGCACTATCAGAATTTATATTCTTAATCACATA-----T 463
consensus_13551#1      TCAGAAGATGAAGTAACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGC---TT 764
consensus_13551#2      TCAGAAGATGAAGTAACCGATTGGATGATGNAGAGGTTCAGGCAGAAGGACCAGC---TT 493
                       *        * *    *    *  *           *        **  **        *

consensus_13551#0      CCTTTGCTGTTTGCAAGAGTTGAAGAGCTCCCTAG--ATGCAGTTTATGATGTCACAATA 1057
consensus_13551#3      CTGTCGAACTTTCTAAGTTTTCAA--ATATACTGA--ACGCATTTTCCCCTGTCAATACT 519
consensus_13551#1      CTGTCAGATTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGG-ATGTATC 823
consensus_13551#2      CTGTCAT-TTTTTTCATGCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGGATGTATC 552
                       *  *     ***   *               **    * * *  *      *     *  

consensus_13551#0      GCGTATAAGCATCGCCTGCCAGATTTTCTGGAT-ATTATATATGGCACCGATCCTTCTGA 1116
consensus_13551#3      GCCTTTGAGAAACGGTTTCTCATTCTATTGAGTTATTGCCTATG-TAT------------ 566
consensus_13551#1      CACACCGG-AGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGT 882
consensus_13551#2      CACACCGGGAGTGCCTTGCTAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTG- 611
                                       * *    *    **    * *      *  *             

consensus_13551#0      AGTCCACATCCACATCAGAACTGTTAAGCTCTGTGACATTCCAACGTCAGAAGATGAAGT 1176
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ACCTATCTCTTTTTTCGTCTGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACC 942
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      AACCGATTGGATGATAGAGAGGTTCAGGCAGAAGGACCAGCTTCTGTCAGATTTTTTCAT 1236
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      TTACATTTGTTACCTATTTCTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTG 1002
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      GCAAGGCCACTTCCCTGATGAAGGAACTGAAGGGGATGTATCCACACCGGAGTGCCTTGC 1296
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      GAACCCATGCCAAAAAGGTACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATAT 1062
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      TAATTTCATTGCAATAGTCAGCTCGACAGGCTTCTTCTTGTACCTATCTCTTTTTTCGTC 1356
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      CTGCAAAAGATATTTTCTGTAGAAAAAAAAAA---------------------------- 1094
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      TGTGTGGTTCAAGGTCTATGTATTATTAAGCTGCGCTTACCTTACATTTGTTACCTATTT 1416
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ------------------------------------------------------------
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      CTCCATTCAACCACCCCAACTGATATGCTCATCAGAGGGTGGAACCCATGCCAAAAAGGT 1476
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ------------------------------------------------------------
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      ACTGTAGAAAGAGGCTGTAGCTTTGACTGGAAACTGTATATCTGCAAAAGATATTTACTG 1536
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ------------------------------------------------------------
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      TAGAAACCCTTGGCTTGTGCAATTAAAATCGTTCCTCTTTTGTTTTACTTCTGCAAGATG 1596
consensus_13551#3      ------------------------------------------------------------
consensus_13551#1      ------------------------------------------------------------
consensus_13551#2      ------------------------------------------------------------
                                                                                   

consensus_13551#0      ATTTAGTAAAAAAAAA 1612
consensus_13551#3      ----------------
consensus_13551#1      ----------------
consensus_13551#2      ----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)