cluster # 13564

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Oryza sativa
cluster # 13564 cluster # 13564 Sequences # 13 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13564#0 length = 2395 sequences # 10

consensus_13564#1 length = 452 sequences # 3

consensusID : consensus_13564#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2395
fasta sequence

                              [GTGACCCTGACGAACAATTTGCTGCAGGGGCCGACGCCCAAATTTGCCGATAAGGTGAAAGCAGATGTGGTGCCGACTACGGAGCGGTTCTGCTTGAGCACCCCTGGACAACCTTGTGATCCCCGTGTAAACCTGCTGCTGGAGGTGGCGGCTGAGTTCCAGTACCCGGCGAAGCTCGCAGATAATTGGAAAGGGAATGATCCGTGTGATGGTTACATTGGTGTTGGATGCGATGCAGGGAACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATCGGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTGCCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAAT-GGGAGTCCCTCTTCGTCTTCT-GCTGGAATCATTGCT-GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCAAGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAATGTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTATGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTGCGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAGTATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATACTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCGGCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCTCCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTCATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGCATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCAATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG-CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTGCAAATTTGCTAAC-GTTCTGTTCTGCCATATTTCTGAGCTTAAAACAGGAGCGGTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGTAGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGATCATGATTGTACCAGAACCATCTCAATTATTGGAGACCGTGGTCAGGGCGTCAGGCCGTCTCCTAACTGTCAAAAT]

[+] EMBL AK066295             [GTGACCCTGACGAACAATTTGCTGCAGGGGCCGACGCCCAAATTTGCCGATAAGGTGAAAGCAGATGTGGTGCCGACTACGGAGCGGTTCTGCTTGAGCACCCCTGGACAACCTTGTGATCCCCGTGTAAACCTGCTGCTGGAGGTGGCGGCTGAGTTCCAGTACCCGGCGAAGCTCGCAGATAATTGGAAAGGGAATGATCCGTGTGATGGTTACATTGGTGTTGGATGCGATGCAGGGAACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATCGGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTGCCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAAT GGGAGTCCCTCTTCGTCTTCT GCTGGAATCATTGCT GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCAAGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAATGTGACCAACAACTTCAGTGACGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTATGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTGCGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAGTATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATACTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCGGCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCTCCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTCATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGCATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCAATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTGCAAATTTGCTAACTGTTCTGTTCTGCCATAATTCTGAGCTTAAAACAGGAGCGGTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGTAGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGATCATGATTGTACCAGAACCATCTCAATTATTGGAGACCGTGGTCAGGGCGTCAGGCCGTCTCCTAACTGTCAAAAT]
[+] EMBL OSTMK                [GTGACCCTGACGAACAATTTGCTGCAGGGGCCGACGCCCAAATTTGCCGATAAGGTGAAAGCAGATGTGGTGCCGACTACGGAGCGGTTCTGCTTGAGCACCCCTGGACAACCTTGTGATCCCCGTGTAAGCCTGCTGCTGGAGGTGGCGGCTGGGTTCCAGTACCCGGCGAAGCTCGCAGATAATTGGAAAGGGAATGATCCGTGTGATGGTTACATTGGTGTTGGATGCGATGCAGGGAACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATCGGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTGCCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGTGGTGATGGAAGCAAT GGGAGTCCCTCTCCGTCTTCT GCTGGAATCATTGCT GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTCGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCAAGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAATGTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTATGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTGCGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAGTATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATACTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCGGCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCTCCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTCATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGCATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCAATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCCGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTC AAGAATTGCCT                                                                                                                                                                                                                                             ]
[+] EMBL C22449               [                                                                                                                                                                                                                ATGGTTACATTGGTGTTGGATGCGATGCAGGGAACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATCGGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTGCCGAANGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAATGGGGAGTCCCTCTTCGTCTTCTGGCTGGAATCATTGCTGGGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK062249             [                                                                                                                                                                                                                                                                                                                                          CTTGCAGACAACAATATTACTGGCACGGTGCCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTTTATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAAT GGGAGTCCCTCTTCGTCTTCT GCTGGAATCATTGCT GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCAAGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAATGTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTACGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTGCGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAGTATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATACTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCGGCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCTCCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTCATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGCATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCAATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTG                                                                                                                                                                                                                                    ]
[+] EMBL OSC102202            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCAACCCGAACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCA NAATGCGCCAGATGGTGGGAATGGCGGTGATGGAAGCAAT GGGAGTCCCTCTTCGTCTTCT GCTGGAATCATTGCT GGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGTTTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATGGTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGTGGCAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSC107691            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cncngnCAATGTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTACAAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATGGGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTNCTGACCAAGGTTCGCCATCGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTATGAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTTGNAAGACCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BE040330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCGTTAGCACTGTCGCTGAGCTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGAGTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTGCAAAaaaa                                                                                                                                                                                                                            ]
[+] EMBL C22450               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGCTGTCAATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGAAGTTTGCAAAaa                                                                                                                                                                                                                              ]
[-] EMBL CB966792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           tcgaacgagGCTCTCTACTC TTCGGATGTTTGG AACCTTC GATCCAGATTCAGA GACAGCTAT GTATCGATCTAGACA GACACTGCCGCAAGCATTGAAGAAATGGCAGGCCCTTGAGGATACCCACCATTTTGATGGCGCGACGTCTTCATTCCCTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTC AAGAATTGCCTGGAAGTTTGCCAATTTGCTAAC GTTCTGTTCTGCCATATTTCTGAGCTTAAAACCGGAGCGGTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGTAGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGAT                                                                           ]
[-] EMBL CB965769             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCTAGACATGACACTTCCGCAATCATTGAAGAAATGTCAGCCCTTTGAGGATACCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAG CTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTC AAGAATTGCCTGGAAGTTTGCAAATTTGCTAAC GTTCTGTTCTGCCATATTTCTGAGCTTAAAACAGGAGCGGTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGTAGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGAT                                                                           ]




>consensus_13564#0
GTGACCCTGACGAACAATTTGCTGCAGGGGCCGACGCCCAAATTTGCCGATAAGGTGAAA
GCAGATGTGGTGCCGACTACGGAGCGGTTCTGCTTGAGCACCCCTGGACAACCTTGTGAT
CCCCGTGTAAACCTGCTGCTGGAGGTGGCGGCTGAGTTCCAGTACCCGGCGAAGCTCGCA
GATAATTGGAAAGGGAATGATCCGTGTGATGGTTACATTGGTGTTGGATGCGATGCAGGG
AACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATC
GGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTG
CCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTT
TATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCG
AACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCG
CCAGATGGTGGGAATGGCGGTGATGGAAGCAATGGGAGTCCCTCTTCGTCTTCTGCTGGA
ATCATTGCTGGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGT
TTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATG
GTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGT
GGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCA
AGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAAT
GTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTAC
AAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATG
GGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCAT
CGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTAT
GAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTG
CGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAG
TATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATA
CTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCG
GCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCT
CCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTC
ATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGC
ATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCA
ATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAG
CTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTC
AATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGC
TATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAG
GATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAG
ACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGA
TAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTT
TGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGT
GCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTG
GAAGTTTGCAAATTTGCTAACGTTCTGTTCTGCCATATTTCTGAGCTTAAAACAGGAGCG
GTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGT
AGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGATCATGATTGTACCAGAACCAT
CTCAATTATTGGAGACCGTGGTCAGGGCGTCAGGCCGTCTCCTAACTGTCAAAAT

consensusID : consensus_13564#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 452
fasta sequence

                              [GCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGANGTTTGCAAA------AAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C22343               [GCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGANGTTTGCAAA      AAAAAAAAAAAAAAAAA        ]
[+] EMBL CF315041             [              CGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCT                                            ]
[+] EMBL C22346               [               GGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGATGTTTGCAAATTTGCTAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13564#1
GCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGCTATGG
TATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAGGATAG
CAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAGACAAG
CATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGATAGGG
TAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTTTGTTC
ATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGTGCTGC
CTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTGGANGT
TTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13564#0      GTGACCCTGACGAACAATTTGCTGCAGGGGCCGACGCCCAAATTTGCCGATAAGGTGAAA 60
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      GCAGATGTGGTGCCGACTACGGAGCGGTTCTGCTTGAGCACCCCTGGACAACCTTGTGAT 120
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      CCCCGTGTAAACCTGCTGCTGGAGGTGGCGGCTGAGTTCCAGTACCCGGCGAAGCTCGCA 180
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      GATAATTGGAAAGGGAATGATCCGTGTGATGGTTACATTGGTGTTGGATGCGATGCAGGG 240
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      AACATTACAGTGCTGAATTTTGCCAGGATGGGGTTCAGTGGGAGCATCTCCCCAGCTATC 300
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      GGGAAGATTACAACACTTCAGAAGCTTATTCTTGCAGACAACAATATTACTGGCACGGTG 360
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      CCGAAGGAGGTTGCTGCTTTGCCTGCTCTGACGGAGGTTGATCTGTCGAATAACAATCTT 420
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      TATGGGAAACTCCCTACCTTTGCAGCGAAGAATGTGCTGGTGAAAGCTAATGGCAACCCG 480
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      AACATTGGCAAGGATGCTCCTGCACCGTCTGGATCAGGTGGTAGTGGCGGCAGCAATGCG 540
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      CCAGATGGTGGGAATGGCGGTGATGGAAGCAATGGGAGTCCCTCTTCGTCTTCTGCTGGA 600
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      ATCATTGCTGGCTCAGTGGTTGGTGCTATTGCTGGAGTAGGCCTTCTTGCTGCATTAGGT 660
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      TTCTATTGCTATAAAAGAAAACAGAAGCCTTTTGGAAGGGTTCAAAGTCCACACGCTATG 720
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      GTTGTTCATCCTCGGCACTCAGGGTCAGATCCTGATATGGTTAAAATCACAGTTGCTGGT 780
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      GGCAATGTCAATGGCGGTGCAGCTGCAAGTGAGACATACAGTCAAGCGAGCAGTGGTCCA 840
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      AGGGATATTCATGTTGTTGAAACTGGAAATATGGTAATTTCAATTCAAGTCCTCCGCAAT 900
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      GTGACCAACAACTTCAGTGATGAGAATGTCCTTGGCCGTGGTGGCTTTGGCACTGTGTAC 960
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      AAGGGTGAGCTTCATGATGGCACAAAAATTGCTGTGAAGCGAATGGAGGCTGGTGTGATG 1020
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      GGTAACAAGGGGCTAAATGAGTTTAAATCAGAGATTGCTGTGCTGACCAAGGTTCGCCAT 1080
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      CGGAACCTGGTGTCACTGCTTGGCTACTGTCTCGATGGCAATGAGAGGATTCTAGTGTAT 1140
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      GAGTACATGCCACAGGGGACACTGAGTCAACACCTGTTTGAGTGGAAAGAACACAATCTG 1200
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      CGGCCGTTGGAATGGAAGAAGAGACTTAGCATTGCGCTTGATGTTGCAAGGGGTGTTGAG 1260
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      TATCTTCACAGCCTTGCACAGCAGACCTTCATCCACAGAGACTTGAAACCATCAAACATA 1320
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      CTCCTCGGTGATGACATGAAGGCAAAGGTGGCAGACTTTGGATTGGTCCGGCTTGCACCG 1380
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      GCTGATGGGAAGTGCGTGTCAGTAGAGACAAGGCTTGCTGGCACTTTTGGATACCTTGCT 1440
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      CCGGAATATGCAGTTACTGGACGAGTAACAACAAAAGCAGATGTCTTCAGCTTTGGTGTC 1500
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      ATCTTGATGGAGCTGATCACTGGACGCAAGGCGCTTGATGAGACTCAGCCTGAAGACAGC 1560
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      ATGCACCTGGTAACATGGTTCCGAAGAATGCAACTTAGCAAAGACACATTCCAGAAAGCA 1620
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      ATTGACCCAACAATTGACCTCACCGAGGAGACACTTGCAAGCGTTAGCACTGTCGCTGAG 1680
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      CTTGCTGGTCACTGCTGTGCTAGGGAACCACACCAGAGGCCTGATATGGGTCATGCTGTC 1740
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      AATGTGCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGC 1800
consensus_13564#1      -----GCTCTCTACTCTTTCGGATGTTTGGAAACCGTCTGATCCAGATTCAGATGACAGC 55
                            *******************************************************

consensus_13564#0      TATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAG 1860
consensus_13564#1      TATGGTATCGATCTAGACATGACACTGCCGCAAGCATTGAAGAAATGGCAGGCCTTTGAG 115
                       ************************************************************

consensus_13564#0      GATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAG 1920
consensus_13564#1      GATAGCAGCCATTTTGATGGCGCGACGTCTTCATTCCTTGCTAGCTTGGATAATACTCAG 175
                       ************************************************************

consensus_13564#0      ACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGA 1980
consensus_13564#1      ACAAGCATACCGACGAGGCCTCCAGGATTTGCAGAATCATTCACCTCTGCTGATGGAAGA 235
                       ************************************************************

consensus_13564#0      TAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTT 2040
consensus_13564#1      TAGGGTAGCTTGTGTGAAATCTCAAGCTTGACGGAAGCAGAACATCCAAGTGATCCTTTT 295
                       ************************************************************

consensus_13564#0      TGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGT 2100
consensus_13564#1      TGTTCATTCCTTTAGTCTCCTCACTCCCCTGCTTTTTAATGTTTCTTGGTTTGGCTATGT 355
                       ************************************************************

consensus_13564#0      GCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTG 2160
consensus_13564#1      GCTGCCTTGTAGCTGTCCTTTGATCATGTATCTTGTGATCTTGACTCAAAGAATTGCCTG 415
                       ************************************************************

consensus_13564#0      GAAGTTTGCAAATTTGCTAACGTTCTGTTCTGCCATATTTCTGAGCTTAAAACAGGAGCG 2220
consensus_13564#1      GANGTTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- 452
                       ** *********      **              * *                       

consensus_13564#0      GTGAAGGGCTGCTGGGCTGTATCAACACTACTCCCTGCTCCTTAACATCATCTCAGTTGT 2280
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      AGTCATTGTTGCTACTGTATTCTTTTAGTTCTATGATGATCATGATTGTACCAGAACCAT 2340
consensus_13564#1      ------------------------------------------------------------
                                                                                   

consensus_13564#0      CTCAATTATTGGAGACCGTGGTCAGGGCGTCAGGCCGTCTCCTAACTGTCAAAAT 2395
consensus_13564#1      -------------------------------------------------------