|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13585#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1215 fasta sequence
[ACCAAAACAAAGGAGGCAATGATCACCGCCGGCGAGGTCGACGGTGAGAACATCGACAACTTGCTCTCCCAGTCCTTGTTCATTACCTGCACCGGCGGCAACGACTACAATGCCTTCACTGATGGCATCGTCCCCGTCAGCGACGCGCCGGCCTTCATCGCCCACATGGTTGCCACTTACATCAAGCATATCAAGACACTGTACAATCTAGGGGCTCGGAGGCTGGGGATACTTGACGTGCTACCTCTAGGGTGTCTACCGATCTCCAGGGTCCCCATTGAAAATGGTTCATGCAGTGGCACTGACAACTGGCAGGCACGGCTCTTCAACCGTCTCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTACGACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCACCTGTGCCCGGACCGG-GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTCGCCGCGCTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATCTGGGGCGGCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCACCCAATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCA-GGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC-ATAATTGAAGTGTGGTGATACCTCACGGTACATCCTAAGGA-CCACAGATTCTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCTGAATAATTCCTCCTATGCTATAGAGCACTTGTTGTCATGCCTGGAAATTAAGCAGTGTCTAGTTGATCACTGCAGGAAGAAAGAAATGCTTGACTAGAGAAGAAGAAAAAAAACATATTGACCTATCTCAGCAGCACCTCTGAATTATGGACTACAAGATCTTGGATAAAGGCATTATACAAACAGCCTTTTTTTTTCTCTCCTGAATAATTGCTCCTATGCTATGGAGCACTTGTTGTTGTCATGCTTGGAAACTAAAGCAGTGTCTAGTGA]
[+] EMBL AK070277 [ACCAAAACAAAGGAGGCAATGATCACCGCCGGCGAGGTCGACGGTGAGAACATCGACAACTTGCTCTCCCAGTCCTTGTTCATTACCTGCACCGGCGGCAACGACTACAATGCCTTCACTGATGGCATCGTCCCCGTCAGCGACGCGCCGGCCTTCATCGCCCACATGGTTGCCACTTACATCAAGCATATCAAGACACTGTACAATCTAGGGGCTCGGAGGCTGGGGATACTTGACGTGCTACCTCTAGGGTGTCTACCGATCTCCAGGGTCCCCATTGAAAATGGTTCATGCAGTGGCACTGACAACTGGCAGGCACGGCTCTTCAACCGTCTCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTACGACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCACCTGTGCCCGGACCGG GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTCGCCGCGCTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATCTGGGGCGGCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCACCCAATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCA GGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC ATAATTGAAGTGTGGTGATACCTCACGGTACATCCTAAGGA CCACAGATTCTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCTGAATAATTCCTCCTATGCTATAGAGCACTTGTTGTCATGCCTGGAAATTAAGCAGTGTCTAGTTGATCACTGCAGGAAGAAAGAAATGCTTGACTAGAGAAGAAGAAAAAAAACATATTGACCTATCTCAGCAGCACCTCTGAATTATGGACTACAAGATCTTGGATAAAGGCATTATACAAACAGCCTTTTTTTTTCTCTCCTGAATAATTGCTCCTATGCTATGGAGCACTTGTTGTTGTCATGCTTGGAAACTAAAGCAGTGTCTAGTGA]
[+] EMBL AK071697 [ACCAAAACAAAGGAGGCAATGATCACCGCCGGCGAGGTCGACGGTGAGAACATCGACAACTTGCTCTCCCAGTCCTTGTTCATTACCTGCACCGGCGGCAACGACTACAATGCCTTCACTGATGGCATCGTCCCCGTCAGCGACGCGCCGGCCTTCATCGCCCACATGGTTGCCACTTACATCAAGCATATCAAGACACTGTACAATCTAGGGGCTCGGAGGCTGGGGATACTTGACGTGCTACCTCTAGGGTGTCTACCGATCTCCAGGGTCCCCATTGAAAATGGTTCATGCAGTGGCACTGACAACTGGCAGGCACGGCTCTTCAACCGTCTCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTACGACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCACCTGTGCCCGGACCGG GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTCGCCGCGCTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATCTGGGGCGGCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCACCCAATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCA GGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC ATAATTGAAGTGTGGTGATACCTCACGGTACATCCTAAGGA CCACAGATTCTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCTGAATAATTCCTCCTATGCTATAGAGCACTTGTTGTCATGCCTTGAAATTAAGCAGTGTCTAGTTGATCACTGCAGGAAGAAAGAAATGCTTGACTAGAGAAGAAGAAAAAAAAC ]
[+] EMBL AK059954 [ACCAAAACAAAGGAGGCAATGATCACCGCCGGCGAGGTCGACGGTGAGAACATCGACAACTTGCTCTCCCAGTCCTTGTTCATTACCTGCACCGGCGGCAACGACTACAATGCCTTCACTGATGGCATCGTCCCCGTCAGCGACGCGCCGGCCTTCATCGCCCACATGGTTGCCACTTACATCAAGCATATCAAGACACTGTACAATCTAGGGGCTCGGAGGCTGGGGATACTTGACGTGCTACCTCTAGGGTGTCTACCGATCTCCAGGGTCCCCATTGAAAATGGTTCATGCAGTGGCACTGACAACTGGCAGGCACGGCTCTTCAACCGTCTCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTACGACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCACCTGTGCCCGGACCGG GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTCGCCGCGCTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATCTGGGGCGGCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCACCCAATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCA GGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC ATAATTGAAGTGTGGTGATACCTCACGGTACATCCTAAGGA CCACAGATTCTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCTGAATAATTCCTCCTATGCTATAGAGCACTTGTTGTCATGCCTGGAAATTAAGCAGTGTCTAGTTGATCACTGCAGGAAGAAAGAAATGCTTGACT ]
[+] EMBL AK060201 [ACCAAAACAAAGGAGGCAATGATCACCGCCGGCGAGGTCGACGGTGAGAACATCGACAACTTGCTCTCCCAGTCCTTGTTCATTACCTGCACCGGCGGCAACGACTACAATGCCTTCACTGATGGCATCGTCCCCGTCAGCGACGCGCCGGCCTTCATCGCCCACATGGTTGCCACTTACATCAAGCATATCAAGACACTGTACAATCTAGGGGCTCGGAGGCTGGGGATACTTGACGTGCTACCTCTAGGGTGTCTACCGATCTCCAGGGTCCCCATTGAAAATGGTTCATGCAGTGGCACTGACAACTGGCAGGCACGGCTCTTCAACCGTCTCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTACGACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCTCCTGTGCCCGGACCGG GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTCGCCGCGCTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATCTGGGGCGGCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCACCCAATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCA GGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC ATAATTGAAGTGTGGTGATACCTCACGGTACATCCTAAGGA CCACAGATTCTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCTGAATAATTCCTCCTATGCTATAGAGCACTTGTTGTCATGCCTGGAAATTAAGCAGTGTCTAGTTGATCACTGCAGGAAGAAAGAAATGCTTGACT ]
[+] EMBL CB657922 [ACCAAAACAAAGGAGGCAATGATCACCGCCGGCGAGGTCGACGGTGAGAACATCGACAACTTGCTCTCCCAGTCCTTGTTCATTACCTGCACCGGCGGCAACGACTACAATGCCTTCACTGATGGCATCGTCCCCGTCAGCGACGCGCCGGCCTTCATCGCCCACATGGTTGCCACTTACATCAAGCATATCAAGACACTGTACAATCTAGGGGCTCGGAGGCTGGGGATACTTGACGTGCTACCTCTAGGGTGTCTACCGATCTCCAGGGTCCCCATTGAAAATGGTTCATGCAGTGGCACTGACAACTGGCAGGCACGGCTCTTCAACCGTCTCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTACGACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCACCTGTGCCCGGACCGGNGAC ACTA ]
[-] EMBL CB654544 [ CAAGACACTGTACAATCTAGGGGCTCGGAGGCTGGGGATACTTGACGTGCTACCTCTAGGGTGTCTACCGATCTCCAGGGTCCCCATTGAAAATGGTTCATGCAGTGGCACTGACAACTGGCAGGCACGGCTCTTCAACCGTCTCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTACGACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCACCTGTGCCCGGACCGG GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTTTTCCACGGCTCGCCGCGCTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATTTGGGGCGGCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCACCCAATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCA GGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC ATAATTGAAGTGTGGTGATACCTCACGGTACATCCTAAGGA CCACAGATTCTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCTGAATAATTCATGGTATGCTATAGAGCACTTGTTGTCATGCCTGGA ]
[-] EMBL CB657923 [ GGCACGGCTCTTCAACCGTCTCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTACGACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCACCTGTGCCCGGACCGG GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTCGCCGCGCTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATCTGGGGCGGCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCACCCAATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCA GGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC ATAATTGAAGTGTGGTGATACCTCACGGTACATCCTAAGGA CCACAGATTCTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCTGAATAATTCCTCCTATGCTATAGAGCACTTGTTGTCATGCCTGGAAATTAAGCAGTGTCTAGTTGATCACTGCAGGAGGAAAGAAA ]
[-] EMBL CB684524 [ CACGGTTCTTCAACCGTTTCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTATTACCCCTTTTACGACATGATAAAGAATCCATCTTCGCCTGGGGTGAGGGAGGTGGCGAGGGCTTTCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGTTCGGGGACCCCCCCCCTGTGCCCGGACCGG GACAATTACATTTTTTGGGACAAGGTGCAGGGCACCCAGGCCGCCTCCCACAACTGGGTCCACGCCTTTTTCCACGGCTCGCCGCGTTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATTTGGGGCGGCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCCCCCAATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCA GGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC ATAATTGAAGTGTGGTGATGCCTCCCGGTACATCCTAAGGC CCCCAGATTTTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCaaggta ]
[+] EMBL BF430494 [ TCCTCCGACGAGAGATGACCGCCGCCGCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTACGACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGAGACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCACCTGTGCCCGGACCGG GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTCGCCGCGCTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATCTGGGGCGGCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCACCCAATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCA GGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC ATAATTGAAGTGTGGTGATACCTCACGGTACATCCTAAGGA CCACAGATTCTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCTGAATAATTCCTCCTATGCTATAGAGCACTTGTTGTCATGCCTGGAAATTAAGCAGTGTCTAGTT ]
[+] EMBL BI808265 [ GACTGCTCGGCGACCACCCACCTGTGCCCGGACCGG GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTC CCGCGCTACGCCGAGCCCATCAGCTTCACCCAGCTGGTCGCCTCGCCGGCCGTCGATCTGGGGC GCCGTCCCCGGGCACAAACCGGACGGCCAGGATTTGATCACCCCATGGACTCATATTGGTATAAGCATTGTTCATTGGTAAACCATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAGTCACGGAGATGGAGATGTTGAATTGGGGTTGATGATGGTATATATGTGC ATAATTGAAGTGTGGTGATACCTC CGGTACATCCTAAGGA CCACAGATTCTCAGATAAGACCTTGTACCAGTTTTTGTGTTTTTTTCCTGAATAATTCCTCCTATGCTATAGAGCACTTGTTGTCATGCCTGGAAATTAAGCCGTGTCTAGTTGATC CTGCAGGAAGAAAGAAATGCTTGACTAGAGAAGAAGAAAAAAA ]
[+] EMBL AU172727 [ tcncCCCAATGGACTCATATTGGTAAAAGCATTGTTCATTGGTAACCAATGAAAATCGCTGGGTTTCNTTTGGTTTNGGAAGTCA GAAGATGGAGATGTTAAATTGGGGTTGATGATGGTATATATGTGCAATAATTGAAGTGTGGTGATACCTCACGGTACATCCTAAGGACCCNCAGATTCTCAGATAAGACATTGTACAAGTTTTTGTGTTTTTTTCCTGAATAATTCCTCCTATGCTATAGAGCACTTGTTGTCATGCCTGGAAAaaaa ]
consensusID : consensus_13585#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 535 fasta sequence
[CCGCGTCTACGTCCGAGCCCCATCAGCTTTCACCCAGCTGGTCGCCTCGCCAGCCGTCGATCTGGGGCAGCCGTCCCCGGGCACAACAACCGGACAGGCCAGGATTTTGGATGCACCCACATGGGACTGCATATTGGGTATAAGCACTTGTCTGCATTGGTAAACACATGAATAATGCGCTGGGTTTGCCTGTTGGTTTTGGGATCAGGAGATGGAGATGTTGGAATTGGGGTTGATGATGGTATATATGTGGCATAATTGAAGTGTGGTGGATACCTCACGGTACATCCTAAGGACCACAGATTCCTCAGATAAGACTTTGGTGACAAGTTTTTGTGGTTTTTTTCCTGGAATAATTGCCTGCCTATGGCTGATAGAGCACCTTCGTTGTGCATGCCTGGGAAATTAACAGTCGTCTAGTTGGATGCACCTGCAGGAAGAAAGAAATGGCTTGGACTAGAGAAGAAGAAAAACAAACATATTGACCTATCTCACCACCACCTCTGAATTATGGACTACAAGATCTTGGATAAAG]
[+] EMBL BI797101 [CCGCGTCTACGTCCGAGCCCCATCAGCTTTCACCCAGCTGGTCGCCTCGCCAGCCGTCGATCTGGGGCAGCCGTCCCCGGGCACAACAACCGGACAGGCCAGGATTTTGGATGCACCCACATGGGACTGCATATTGGGTATAAGCACTTGTCTGCATTGGTAAACACATGAATAATGCGCTGGGTTTGCCTGTTGGTTTTGGGATCAGGAGATGGAGATGTTGGAATTGGGGTTGATGATGGTATATATGTGGCATAATTGAAGTGTGGTGGATACCTCACGGTACATCCTAAGGACCACAGATTCCTCAGATAAGACTTTGGTGACAAGTTTTTGTGGTTTTTTTCCTGGAATAATTGCCTGCCTATGGCTGATAGAGCACCTTCGTTGTGCATGCCTGGGAAATTAACAGTCGTCTAGTTGGATGCACCTGCAGGAAGAAAGAAATGGCTTGGACTAGAGAAGAAGAAAAACAAACATATTGACCTATCTCACCACCACCTCTGAATTATGGACTACAAGATCTTGGATAAAG]
consensusID : consensus_13585#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 529 fasta sequence
[CAGGATTCGGCACGAGGTGGCGAAGGCGTGCTGNGGAGACNGCAANCTGAANACGGANGCCGACTGCTCGGCGACCACCCANCTGTGCCCGGACCGGGACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTCGCCGCGCTACGCCGANCCCATCAGGNNNNCCCAGCTGGTCGCCTCCCCGGCCGTCAATCTGGGGCGGCGTCCCCGGGCACAAACCGGACGGNCAGGATTTGATCACCCNATGGACTCNTATTGGTATAAGCATTGTTCATTGGTTAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAATCANGANATTGAAATGTTGAATTGGGGTTGATGATGGTATATATGTTCATAATTGAAATGTNGTGATACCTCNCCGTACATCCTNAGGACCACANATTCTCNNATTANAAATTGTTCGANTTTTTGTGTTTTTTTCCTGAATAATTCCCCTATGCTATAAAACACGNGT]
[+] EMBL AA753074 [CAGGATTCGGCACGAGGTGGCGAAGGCGTGCTGNGGAGACNGCAANCTGAANACGGANGCCGACTGCTCGGCGACCACCCANCTGTGCCCGGACCGGGACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTCCACGCCTTCTTCCACGGCTCGCCGCGCTACGCCGANCCCATCAGGNNNNCCCAGCTGGTCGCCTCCCCGGCCGTCAATCTGGGGCGGCGTCCCCGGGCACAAACCGGACGGNCAGGATTTGATCACCCNATGGACTCNTATTGGTATAAGCATTGTTCATTGGTTAACAATGAAAATCGCTGGGTTTCCTTTGGTTTTGGGAATCANGANATTGAAATGTTGAATTGGGGTTGATGATGGTATATATGTTCATAATTGAAATGTNGTGATACCTCNCCGTACATCCTNAGGACCACANATTCTCNNATTANAAATTGTTCGANTTTTTGTGTTTTTTTCCTGAATAATTCCCCTATGCTATAAAACACGNGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13585#0 ACCAAAACAAAGGAGGCAATGATCACCGCCGGCGAGGTCGACGGTGAGAACATCGACAAC 60
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 TTGCTCTCCCAGTCCTTGTTCATTACCTGCACCGGCGGCAACGACTACAATGCCTTCACT 120
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 GATGGCATCGTCCCCGTCAGCGACGCGCCGGCCTTCATCGCCCACATGGTTGCCACTTAC 180
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 ATCAAGCATATCAAGACACTGTACAATCTAGGGGCTCGGAGGCTGGGGATACTTGACGTG 240
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 CTACCTCTAGGGTGTCTACCGATCTCCAGGGTCCCCATTGAAAATGGTTCATGCAGTGGC 300
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 ACTGACAACTGGCAGGCACGGCTCTTCAACCGTCTCCTCCGACGAGAGATGACCGCCGCC 360
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 GCCACAGCCTCCATGCCGGACTTGGTGTACTCCATCGGCAGCATTTACTACACCTTCTAC 420
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 GACATGATAAAGAATCCATCTTCGGCTGGGGTGAGGGAGGTGGCGAGGGCGTGCTGCGGA 480
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 -----------------------CAGGATTCGGCACGAGGTGGCGAAGGCGTGCTGNGGA 37
consensus_13585#0 GACGGCAAGCTGAACGCGGAGGCCGACTGCTCGGCGACCACCCACCTGTGCCCGGACCGG 540
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 GACNGCAANCTGAANACGGANGCCGACTGCTCGGCGACCACCCANCTGTGCCCGGACCGG 97
consensus_13585#0 GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTC 600
consensus_13585#1 ------------------------------------------------------------
consensus_13585#2 GACAACTACATCTTCTGGGACAAGGTGCACGGCACCCAGGCCGCCTACCACAACTGCGTC 157
consensus_13585#0 CACGCCTTCTTCCACGGCTCGCCGCG-CTACG-CCGAGCCC-ATCAGCTT-CACCCAGCT 656
consensus_13585#1 ---------------------CCGCGTCTACGTCCGAGCCCCATCAGCTTTCACCCAGCT 39
consensus_13585#2 CACGCCTTCTTCCACGGCTCGCCGCG-CTACG-CCGANCCC-ATCAGGNN-NNCCCAGCT 213
***** ***** **** *** ***** *******
consensus_13585#0 GGTCGCCTCGCCGGCCGTCGATCTGGGGCGGCCGTCCCCGGGCACAA--ACCGGAC-GGC 713
consensus_13585#1 GGTCGCCTCGCCAGCCGTCGATCTGGGGCAGCCGTCCCCGGGCACAACAACCGGACAGGC 99
consensus_13585#2 GGTCGCCTCCCCGGCCGTCAATCTGGGGCGGC-GTCCCCGGGCACAA--ACCGGAC-GGN 269
********* ** ****** ********* ** ************** ******* **
consensus_13585#0 CAGGATTT--GAT-CACCCA-ATGG-ACT-CATATTGG-TATAAGCA-TTGTT--CATTG 763
consensus_13585#1 CAGGATTTTGGATGCACCCACATGGGACTGCATATTGGGTATAAGCACTTGTCTGCATTG 159
consensus_13585#2 CAGGATTT--GAT-CACCCN-ATGG-ACT-CNTATTGG-TATAAGCA-TTGTT--CATTG 319
******** *** ***** **** *** * ****** ******** **** *****
consensus_13585#0 GTAAACA-ATGAA-AAT-CGCTGGGTTTCCTT--TGGTTTTGGGAGTCAGGAGATGGAGA 818
consensus_13585#1 GTAAACACATGAATAATGCGCTGGGTTTGCCTGTTGGTTTTGGGA-TCAGGAGATGGAGA 218
consensus_13585#2 GTTAACA-ATGAA-AAT-CGCTGGGTTTCCTT--TGGTTTTGGGAATCANGANATTGAAA 374
** **** ***** *** ********** * * *********** *** ** ** ** *
consensus_13585#0 TGTTG-AATTGGGGTTGATGATGGTATATATGTG-CATAATTGAAGTGTGGTG-ATACCT 875
consensus_13585#1 TGTTGGAATTGGGGTTGATGATGGTATATATGTGGCATAATTGAAGTGTGGTGGATACCT 278
consensus_13585#2 TGTTG-AATTGGGGTTGATGATGGTATATATGTT-CATAATTGAAATGTNGTG-ATACCT 431
***** *************************** ********** *** *** ******
consensus_13585#0 CACGGTACATCCTAAGGACCACAGATTC-TCAGATAAGACATTGT--ACAAGTTTTTGTG 932
consensus_13585#1 CACGGTACATCCTAAGGACCACAGATTCCTCAGATAAGACTTTGGTGACAAGTTTTTGTG 338
consensus_13585#2 CNCCGTACATCCTNAGGACCACANATTC-TCNNATTANAAATTGTT--CGANTTTTTGTG 488
* * ********* ********* **** ** ** * * *** * * ********
consensus_13585#0 -TTTTTTTCCTG-AATAATTCCT--CCTATGCT--ATAGAGCACTT--GTTGT-CATGCC 983
consensus_13585#1 GTTTTTTTCCTGGAATAATTGCCTGCCTATGGCTGATAGAGCACCTTCGTTGTGCATGCC 398
consensus_13585#2 -TTTTTTTCCTG-AATAATTCCC---CTATGCT--ATAAAACACGN--GT---------- 529
*********** ******* * ***** *** * *** **
consensus_13585#0 TGGAAATTAAGCAGT-GTCTAGTTGATCAC---TGCAGGAAGAAAGAAATGCTT--GACT 1037
consensus_13585#1 TGGGAAATTAACAGTCGTCTAGTTGGATGCACCTGCAGGAAGAAAGAAATGGCTTGGACT 458
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 AGAGAAGAAGAAAAA-AAACATATTGACCTATCTCAGCAGCACCTCTGAATTATGGACTA 1096
consensus_13585#1 AGAGAAGAAGAAAAACAAACATATTGACCTATCTCACCACCACCTCTGAATTATGGACTA 518
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 CAAGATCTTGGATAAAGGCATTATACAAACAGCCTTTTTTTTTCTCTCCTGAATAATTGC 1156
consensus_13585#1 CAAGATCTTGGATAAAG------------------------------------------- 535
consensus_13585#2 ------------------------------------------------------------
consensus_13585#0 TCCTATGCTATGGAGCACTTGTTGTTGTCATGCTTGGAAACTAAAGCAGTGTCTAGTGA 1215
consensus_13585#1 -----------------------------------------------------------
consensus_13585#2 -----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||