These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13604#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2093 fasta sequence [GTTCTCCTGCCCTTTCTCTTCCTTTCCCCTGTCCTTGCGCCGCCGCCGCCTTGCCTTACCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCTCCTCCTCTCTTGGCGCTCCCTCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACTGGATGGCGTAGCGTTGGATTT-GGGTGCGGTG-AT-GGAGTTTCGCC-GGCGACGGCCTCCCCCTCGCGCTCTTCCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCCTGTTTCTCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCGACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTT-GGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGA-GGAT-GCTAGAT-GGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGATTTTCTGTACAATTGGCACTGGACATTCTTTCTGTATCCAGATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAGACTCTCACTGTTTCGTTTGAATATGCCAACCATCATGTTTATTTTGCAATTACCTACGACACTAGATGAAGCACTTATATGTAAATATTACTGCAGAGTGTTTATCATTTTGCTTAGGTTGCTTCTTAAAATCTAGCGCAGGTGATTGGAAGAAGGTTTAGCTGATCTTGGATATGTTAGGATTATTAGAAGCTAAATGTTTCCCTGATTTTACTTAAAGTAGCTGTTTGCCGCTTGATTTTAGCGATTAAAGTTTCTGGTCTGAAAGAAGTTAGGGTGTGTTTGGTTGGTGGGATATACCCGGATAAGACATGGCCGCCGCTTTTTGGAGGGTGTTTGGATGCTGGGCGAGAGTGGGATAGGGCAGCCCAGAGGGGAATATTCCCTCCACATGCTGGATAGAGGGATCCGGCTGATTTGGCCGGATGCAACCGCCCGAGGCTCGGGCGAGCCGGGCAAGCGAGTTGCGTGACTCGCGTCACCCCTCACCACCACGACGCGAGCGAGGCGACGAGCGCGGTGGCCGGCAAGAGGGACGACGAGCTCGGCGGCCGGCGTGGGCGACGAGAGGGGAGATGAGCTCGGCGGCCGGCGAGAGAGGCGACGAGCGCGGCGGCCGGCGAGAGAGGCGACGAGCTCGGCGGCCGGCGCGGGCGACGAGCGTGGCGGCCGGCGAGAGAGGCGACGAGCTCGGCGGCTGGCGTGGGTGACGAGAGAGGAAGGCGGCGGCGGGAGGAGGCGAGCCTCGGTGGTGGGAGGAGGCGGCCGGCGGCGGGAGGAAGCCGGCGGGAGGAGGCTGCCAGCGGCGTCGGCGAGCCCAGATCTGGCGCTGCTTTTTTTTTCTTTTTCTTTTTTCTATGTGTATTTATAATGGAATGTGTATTTATAATGGAGTGTGTATTTATAATGGAATGTGTATTATGTATTAATTTGATGGGGTA-GGGCCCCATCTCAAGTGAGAGGTGACCACACCTACAAATCCACCATACTTCCTCCAACCAAACAAAAAATTGGATCACCAAATCCACCTTTGTCTCTACAACCAAACAAAAAATTAGATCGCCATATTCACACAACCAAACAAAAATTGGACCGCCATATCCAGCAAAATATGGACCACCGTATCCCATCCAATCTTGACCAGGAACCAAACACACCCTTAGTGTTCTATACAAGCATGTTGACTGTTTGATAAAAAAATCACAATACTGACTGTGGTTTTTGAAAGAAGTTAGTGTTCTAGACAAGTACATCAGGGCTTCTGTCCTAGATCCCCATCCATTTGTGCCTATGAATCATGTTGCTTCTCAGAACAGATGGTAAATTCAATATG] [+] EMBL CF311971 [GTTCTCCTGCCCTTTCTCTTCCTTTCCCCTGTCCTTGCGCCGCCGCCGCCTTGCCTTACCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCTCCTCCTCTCTTGGCGCTCCCTCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACTGGATGGCGTAGCGTTGGATTT GGGTGCGGTG AT GGAGTTTCGCC GGCGACGGCCTCCCCCTCGCGCTCTTCCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCCTGTTTCTCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCGACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTT GGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGA GGAT GCTAGAT GGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTG ] [+] EMBL CF277421 [ TCTTCCTTTCCCCTGTCCTTGCGCCGCCGCCGCCTTGCCTTACCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCTCCTCCTCTCTTGGCGCTCCCTCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACTGGATGGCGTAGCGTTGGATTTGGGGTGCGGTGAATGGGAG TTCGCCGGGCGACGGCCTCCCCCTCGCGCTCTTCCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCC ] [+] EMBL AU057964 [ CTTCCTTTCCCCTGTCCTTGCGCCGCCGCCGCCTTGCCTTACCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCNCCTCCTCTCTTGGCGCTCCCNCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACTGGATGGCGTA NGTTGGATTT GGGTGCGGTG AT GGAGTTTCGCC GGCGACGGCCTCCCCCTCGCGCNCTTCCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCCTGTTTCNCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCGACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGGATGGCTAGATGGGCTATAGACTT ] [+] EMBL CB645050 [ GCGCCCTCGCCGCCTTGCCTTACCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCTCCTCCTCTCTTGGCGCTCCCTCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACTGGATGGCGTAGCGTTGGATTT GGGTGCGGTG AT GGAGTTTCGCC GGCGACGGCCTCCCCCTCGCGCTCTTCCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCCTGTTTCTCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCGACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTT GGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGA GGAT GCTAGAT GGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGATTTTCTGTACAATTGGCACTGGACATTCTTTCTGTATCCAGATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAGACTCTCACTGTTTCGTTTGAATATGCCAACCATCATGTTTATTTTGCAATTACCTAC ] [+] EMBL CB642893 [ GGACCCCTGGAGGGAGCATTT GGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCCC CGAT GCTAGAT GGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGATTTTCTGTACAATTGGCACTGGACATTCTTTCTGTATCCAGATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAGACTCTCACTGTTTCGTTTGAATATGCCAACCATCATGTTTATTTTGCAATTACCTACGACACTAGATGAAGCACTTATATGTAAATATTACTGCAGAGTGTTTATCATTTTGCTTAGGTTGCTTCTTAAAATCTAGCGCAGGTGATTGGAAGAAGGTTTAGCTGATCTTGGATATGTTAGGATTATTAGAAGCTAAATGTTTCCCTGATTTTACTTAAAGTAGCTGTTTGCCGCTTGATTTTAGCGATTAAAGTTTCTGGTCTGAAAGAAGTTAGGGTGTGTTTGGTTGGTGGGATATACCCGGATAAGACATGGCCGCCGCTTTTTGGAGGGTGTTTGGATGCTGGGCGAGAGTGGGATAGGGCAGCCCAGAG ] [-] EMBL CB645051 [ GTTTCTGGTCTGAAAGAAGTTAGGGTGTGTTTGGTTGGTGGGATATACCCGGATAAGACATGGCCGCCGCTTTTTGGAGGGTGTTTGGATGCTGGGCGAGAGTGGGATAGGGCAGCCCAGAGGGGAATATTCCCTCCACATGCTGGATAGAGGGATCCGGCTGATTTGGCCGGATGCAACCGCCCGAGGCTCGGGCGAGCCGGGCAAGCGAGTTGCGTGACTCGCGTCACCCCTCACCACCACGACGCGAGCGAGGCGACGAGCGCGGTGGCCGGCAAGAGGGACGACGAGCTCGGCGGCCGGCGTGGGCGACGAGAGGGGAGATGAGCTCGGCGGCCGGCGAGAGAGGCGACGAGCGCGGCGGCCGGCGAGAGAGGCGACGAGCTCGGCGGCCGGCGCGGGCGACGAGCGTGGCGGCCGGCGAGAGAGGCGACGAGCTCGGCGGCTGGCGTGGGTGACGAGAGAGGAAGGCGGCGGCGGGAGGAGGCGAGCCTCGGTGGTGGGAGGAGGCGGCCGGCGGCGGGAGGAAGCCGGCGGGAGGAGGCTGCCAGCGGCGTCGGCGAGCCCAGATCTGGCGCTGCTTTTTTTTTCTTTTTCTTTTTTCTATGTGTATTTATAATGGAATGTGTATTTATAATGGAGTGTGTATTTATAATGGAATGTGTATTATGTATTAATTTGATGGGGTA GGGCCCCATCTCAA ] [+] EMBL CB654987 [ GCGCGCCCCTCTGAGAGAGAGGCGACGAGCTCGGCGGCCGGCGCGGGCGACGAGCGTGGCGGCCGGCGAGAGAGGCGACGACCTCGGCGGCTGGCGTGGGTGACGAGAGAGGAAGGCGGCGGCGGGAGGAGGCGAGCCTCGGTGGTGGGAGGAGGCGGCCGGCGGCGGGAGGAAGCCGGCGGGAGGAGGCTGCCAGCGGCGTCGGCGAGCCCAGATCTGGCGCTGCTTTTTTTTTCTTTTTCTTTTTTCTATGTGTATTTATAATGGAATGTGTATTTATAATGGAGTGTGTATTTATAATGGAATGTGTATTATGTATTAATTTGATGGGGTATATTCACCATCTCAAGTGAGAGGTGACCACACCTACAAATCCACCATACTTCCTCCAACCAAACAAAAAATTGGATCACCAAATCCACCTTTGTCTCTACAACCAAACAAAAAATTAGATCGCCATATTCACACAACCAAACAAAAATTGGACCGCCATATCCAGCAAAATATGGACCACCGTATCCCATCCAATCTTGACCAGGAACCAAACACACCCTTAGTGTTCTATACAAGCATGTTGACTGTTTGATAAAAAAATCACAATACTGACTGTGGTTTTTGAAAGAAGTTAGTGTTCTAGACAAGTACATCAGGGCTTCTGTCCTAGATCCCCATCCATTTGTGCCTATGAATCATGTTGCTTCTCAGAACAGATGGTAAATTCAATATG] consensusID : consensus_13604#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 921 fasta sequence [CTGTTCTCCTGCCCTTTCTCTTCCTTTCCCCTGTCCTTGCGCCGCCGCCGCCTTGCCTTACCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCTCCTCCTCTCTTGGCGCTCCCTCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACTGGATGGCGTAGCGTTGGATTTGGGTGCGGTGATGGAGTTTCGCCGGCGACGGCCTCCCCCTCGCGCTCTTCCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCCTGTTTCTCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCGACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAGGTACGGTCGCCATTGAGATGGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGGTTAGGATTCAGTGGCCTTTCATTTTATCTTTATATAGGACTTCATTCCTCTAAATCTTGCCTTTATATATTGATTTTAATTATGCAGATTTTCTGTACAATTGGCACTGGACATCCTTTCTGTATCCAGATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAGACTCTCACTGTTTCGTTTGAATATGCCAACCATCATGTTTAAAAAAAAAAAAAA] [+] EMBL CF329941 [CTGTTCTCCTGCCCTTTCTCTTCCTTTCCCCTGTCCTTGCGCCGCCGCCGCCTTGCCTTACCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCTCCTCCTCTCTTGGCGCTCCCTCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACTGGATGGCGTAGCGTTGGATTTGGGTGCGGTGATGGAGTTTCGCCGGCGACGGCCTCCCCCTCGCGCTCTTCCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCCTGTTTCTCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCGACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGAT ] [+] EMBL AK067088 [ CCTGCCCTTTCTCTTCCTTTCCCCTGTCCTTGCGCCGCCGCCGCCTTGCCTTACCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCTCCTCCTCTCTTGGCGCTCCCTCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACTGGATGGCGTAGCGTTGGATTTGGGTGCGGTGATGGAGTTTCGCCGGCGACGGCCTCCCCCTCGCGCTCTTCCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCCTGTTTCTCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCGACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAGGTACGGTCGCCATTGAGATGGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGGTTAGGATTCAGTGGCCTTTCATTTTATCTTTATATAGGACTTCATTCCCCTAAATCTTGCCTTTATATATTGATTTTAATTATGCAGGTTTTCTGTACAATTGGCACTGGACATCCTTTCTGTATCCAGATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAGACTCTCACTGTTTCGTTTGAATATGCCAACCATCA ] [+] EMBL AT003675 [ CCGCACCCTCAAGCACTCTCCGCCCGTTTNTCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCNACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGATGCCAGGTTCGGTCGCCATTGAGATGGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGGTTAGGATTCAGTGGCCTTTCATTTTATCTTTATATAGGACTTCATTCCTCTAAATCTTGCCTTTATATATTGATTTTAATTATGCAGATTTTCTGTACAATTGGCACTGGCCAaaaaaaaaa ] [-] EMBL CF296520 [ AACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGGTTAGGATTCAGTGGCCTTTCATTTTATCTTTATATAGGACATCATTCCTCTAAATCTTGCCTTTATATATTGATTTTAATTATGCAGATTTTCTGTACAATTGGCACTGGACATTCTTTCTGTATCCAGATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAGACTCTCACTGTTTCGTTTGAATATGCCAACCATCATGTTTAAAAAAAAAAAAAA] consensusID : consensus_13604#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 592 fasta sequence [CCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGACACACTCACTCAAGAACCAGACACTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAGATGGCTATAGACTTGATCCTTCCACTTTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGATTTTCTGTACAATTGGCACTGGACATTCTTTTTGTATCCAGATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAGACTCTCACTGTTTCGTTTGAATATGCCAACCATCATGTTTATTTTGCAATTACCTACGACACTAGATGAAGCACTTATATGTAAATATTACTGCAGAGTGTTTATCATTTTGCTTAGGTTGCTTTTTAAAATCTAGCGCAGGTGATGGAAGAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGGTAGCG] [-] EMBL CF297113 [CCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGACACACTCACTCAAGAACCAGACACTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAGATGGCTATAGACTTGATCCTTCCACTTTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGATTTTCTGTACAATTGGCACTGGACATTCTTTTTGTATCCAGATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAGACTCTCACTGTTTCGTTTGAATATGCCAACCATCATGTTTATTTTGCAATTACCTACGACACTAGATGAAGCACTTATATGTAAATATTACTGCAGAGTGTTTATCATTTTGCTTAGGTTGCTTTTTAAAATCTAGCGCAGGTGATGGAAGAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTAGGTAGCG] consensusID : consensus_13604#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence [TCGCCCGGCGACGGCCTCCCCCTCGCGCTCTTTCCCAGTCCTGCCCATCTCCTGCCGCACCCNCAAGCACTNTCCGCCTGTTTCTCCTCGCCACCCGTTGCAGCAGTTNCCCTGTTTTGTGTTGGGCTCCACGGAGCTGCNACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAGATGGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGGTTAGGATTCAGTGGCCTTTCATTTTATCTTTATATAGGACTTCATTCCCCTAAATCTTGCCTTTATATATTGATTTTAATTATGCAGATTTTCTGTNCAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU057965 [TCGCCCGGCGACGGCCTCCCCCTCGCGCTCTTTCCCAGTCCTGCCCATCTCCTGCCGCACCCNCAAGCACTNTCCGCCTGTTTCTCCTCGCCACCCGTTGCAGCAGTTNCCCTGTTTTGTGTTGGGCTCCACGGAGCTGCNACGACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGACACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAGATGGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACATCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTGAATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAGGAAGCCAGAAAATTAATGGTTAGGATTCAGTGGCCTTTCATTTTATCTTTATATAGGACTTCATTCCCCTAAATCTTGCCTTTATATATTGATTTTAATTATGCAGATTTTCTGTNCAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13604#1 CTGTTCTCCTGCCCTTTCTCTTCCTTTCCCCTGTCCTTGCGCCGCCGCCGCCTTGCCTTA 60 consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 ---GTTCTCCTGCCCTTTCTCTTCCTTTCCCCTGTCCTTGCGCCGCCGCCGCCTTGCCTT 57 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 CCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCTCCTC 120 consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 ACCTCCCCGGCTTCTCCTCGCCGACGACGGCTTTCCCCTCACGCTCTCCCGTACCCTCCT 117 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 CTCTCTTGGCGCTCCCTCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACTG 180 consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 CCTCTCTTGGCGCTCCCTCCATCACCCCCCCTCCCAGTAGAGCAAGGGGATTTAGGGACT 177 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 GATGGCGTAGCGTTGGATTTGGGTGCGGTGATGGAGTTTCGCCGGCGACGGCCTCCCCCT 240 consensus_13604#3 -------------------------------------TCGCCCGGCGACGGCCTCCCCCT 23 consensus_13604#0 GGATGGCGTAGCGTTGGATTTGGGTGCGGTGATGGAGTTTCGCCGGCGACGGCCTCCCCC 237 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 CGCGCTCTT-CCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCCTGTTT 299 consensus_13604#3 CGCGCTCTTTCCCAGTCCTGCCCATCTCCTGCCGCACCCNCAAGCACTNTCCGCCTGTTT 83 consensus_13604#0 TCGCGCTCTTCCATGTCCTGCCCATCTCCTGCCGCACCCTCAAGCACTCTCCGCCTGTTT 297 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 CTCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCGAC 359 consensus_13604#3 CTCCTCGCCACCCGTTGCAGCAGTTNCCCTGTTTTGTGTTGGGCTCCACGGAGCTGCNAC 143 consensus_13604#0 CTCCTCGCCACCCGTTGCAGCAGTTACCCTGTTTTGTGTTGGGCTCCACGGAGCTGCGAC 357 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 GACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGAC 419 consensus_13604#3 GACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGAC 203 consensus_13604#0 GACGGTAGCCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGAC 417 consensus_13604#2 --------CCTCGGCCAGGAAGCGACCCATGGACCAATGGTGGGAGCATTTGGCAAGGAC 52 **************************************************** consensus_13604#1 ACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAGGT 479 consensus_13604#3 ACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAG-- 261 consensus_13604#0 ACACTCACTCAAGAACCAGACATTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAG-- 475 consensus_13604#2 ACACTCACTCAAGAACCAGACACTGGCCTGTGATGGGAAACAAGCTCGAGGATGCTAG-- 110 ********************** *********************************** consensus_13604#1 ACGGTCGCCATTGAGATGGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACA 539 consensus_13604#3 ---------------ATGGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACA 306 consensus_13604#0 ---------------ATGGCTATAGACTTGATCCTTCCACTCTCACAGCCGTCAACAACA 520 consensus_13604#2 ---------------ATGGCTATAGACTTGATCCTTCCACTTTCACAGCCGTCAACAACA 155 ************************** ****************** consensus_13604#1 TCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTG 599 consensus_13604#3 TCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTG 366 consensus_13604#0 TCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTG 580 consensus_13604#2 TCGGGGCGATTCGTTTTGCTGCCTGGTGGGCTATTGTTTACTGCTGTCTGCTTGCTGCTG 215 ************************************************************ consensus_13604#1 AATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAG 659 consensus_13604#3 AATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAG 426 consensus_13604#0 AATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAG 640 consensus_13604#2 AATGAAGCAGCTAGCAAATATTGTTCCAAACTAAAAGTTGTAGTGGTTTGGTGTGATGAG 275 ************************************************************ consensus_13604#1 GAAGCCAGAAAATTAATGGTTAG--GATTCAGTGGCCTTTCATTTTATCTTTATATAGGA 717 consensus_13604#3 GAAGCCAGAAAATTAATGGTTAG--GATTCAGTGGCCTTTCATTTTATCTTTATATAGGA 484 consensus_13604#0 GAAGCCAGAAAATTAATGATTTTCTGTACAATTGGCACTGGACATTCTTTCTGTATCCAG 700 consensus_13604#2 GAAGCCAGAAAATTAATGATTTTCTGTACAATTGGCACTGGACATTCTTTTTGTATCCAG 335 ****************** ** * * **** * * ** * * * *** consensus_13604#1 CTTCATT----CCTCTAA-ATCTTGCCTTTATATATTGATTTTAATTA-------TGCAG 765 consensus_13604#3 CTTCATT----CCCCTAA-ATCTTGCCTTTATATATTGATTTTAATTA-------TGCAG 532 consensus_13604#0 ATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAG 760 consensus_13604#2 ATTCATTGAAGCATGTAATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAG 395 ****** * *** ** * **** ** ** ** ** *** ***** consensus_13604#1 ATTTTC--TGTACAATTGGCACTGGACATCCTTTCTGTATCCAGATTCATTGAAGCATGT 823 consensus_13604#3 ATTTTC--TGTNCAAAAAAAAAAAAAAAAAAAA--------------------------- 563 consensus_13604#0 ACTCTCACTGTTTCGTTTGAATATGCCAACCATCATGTTTATTTTGCAATTACCTACGAC 820 consensus_13604#2 ACTCTCACTGTTTCGTTTGAATATGCCAACCATCATGTTTATTTTGCAATTACCTACGAC 455 * * ** *** * * consensus_13604#1 AATATTTCATCTTTGTACCATGCTTCTATTTAAGAGGTGTGCAGACTCTCACTGTTTCGT 883 consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 ACTAGATGAAGCACTTATATGTAAATATTACTGCAGAGTGTTTATCATTTTGCTTAGGTT 880 consensus_13604#2 ACTAGATGAAGCACTTATATGTAAATATTACTGCAGAGTGTTTATCATTTTGCTTAGGTT 515 consensus_13604#1 TTGAATATGCCAACCATCATGTTTAAAAAAAAAAAAAA---------------------- 921 consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 GCTTCTTAAAATCTAGCGCAGGTGATTGGAAGAAGGTTTAGCTGATCTTGGATATGTTAG 940 consensus_13604#2 GCTTTTTAAAATCTAGCGCAGGTGATGGAAGAAAAAAAAAAAAAAAAAAAAAAACACTGT 575 consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 GAT--TATTAGAAGCTAAATGTTTCCCTGATTTTACTTAAAGTAGCTGTTTGCCGCTTGA 998 consensus_13604#2 CATGCCGTTAGGTAGCG------------------------------------------- 592 consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 TTTTAGCGATTAAAGTTTCTGGTCTGAAAGAAGTTAGGGTGTGTTTGGTTGGTGGGATAT 1058 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 ACCCGGATAAGACATGGCCGCCGCTTTTTGGAGGGTGTTTGGATGCTGGGCGAGAGTGGG 1118 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 ATAGGGCAGCCCAGAGGGGAATATTCCCTCCACATGCTGGATAGAGGGATCCGGCTGATT 1178 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 TGGCCGGATGCAACCGCCCGAGGCTCGGGCGAGCCGGGCAAGCGAGTTGCGTGACTCGCG 1238 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 TCACCCCTCACCACCACGACGCGAGCGAGGCGACGAGCGCGGTGGCCGGCAAGAGGGACG 1298 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 ACGAGCTCGGCGGCCGGCGTGGGCGACGAGAGGGGAGATGAGCTCGGCGGCCGGCGAGAG 1358 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 AGGCGACGAGCGCGGCGGCCGGCGAGAGAGGCGACGAGCTCGGCGGCCGGCGCGGGCGAC 1418 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 GAGCGTGGCGGCCGGCGAGAGAGGCGACGAGCTCGGCGGCTGGCGTGGGTGACGAGAGAG 1478 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 GAAGGCGGCGGCGGGAGGAGGCGAGCCTCGGTGGTGGGAGGAGGCGGCCGGCGGCGGGAG 1538 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 GAAGCCGGCGGGAGGAGGCTGCCAGCGGCGTCGGCGAGCCCAGATCTGGCGCTGCTTTTT 1598 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 TTTTCTTTTTCTTTTTTCTATGTGTATTTATAATGGAATGTGTATTTATAATGGAGTGTG 1658 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 TATTTATAATGGAATGTGTATTATGTATTAATTTGATGGGGTAGGGCCCCATCTCAAGTG 1718 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 AGAGGTGACCACACCTACAAATCCACCATACTTCCTCCAACCAAACAAAAAATTGGATCA 1778 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 CCAAATCCACCTTTGTCTCTACAACCAAACAAAAAATTAGATCGCCATATTCACACAACC 1838 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 AAACAAAAATTGGACCGCCATATCCAGCAAAATATGGACCACCGTATCCCATCCAATCTT 1898 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 GACCAGGAACCAAACACACCCTTAGTGTTCTATACAAGCATGTTGACTGTTTGATAAAAA 1958 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 AATCACAATACTGACTGTGGTTTTTGAAAGAAGTTAGTGTTCTAGACAAGTACATCAGGG 2018 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 ------------------------------------------------------------ consensus_13604#3 ------------------------------------------------------------ consensus_13604#0 CTTCTGTCCTAGATCCCCATCCATTTGTGCCTATGAATCATGTTGCTTCTCAGAACAGAT 2078 consensus_13604#2 ------------------------------------------------------------ consensus_13604#1 --------------- consensus_13604#3 --------------- consensus_13604#0 GGTAAATTCAATATG 2093 consensus_13604#2 --------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||