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Oryza sativa
cluster # 13623 cluster # 13623       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13623#0 length = 1588 sequences # 12  
consensus_13623#1 length = 326 sequences # 1  

consensusID : consensus_13623#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1588
fasta sequence
                              [AACTCCTCCCTCCTCCTCCTCCCACGTCCCCCGCACCTTTCCCCCCAACCCGCAGCCCAAACAAGAGGGAATCGACCAATCAATCCATCAATCAATCAACCGATCCGACCCATGCCCCCATCCGTCGCCACCCACGCATCCCTCCTCCTCAAAGCCGCCGCCGCAGCCGCGCACCTCCACCCCAAGCCCTTCTTCTCCCCACGCGCGGCGCCGCCGGGG-AT-CCCGTCTGCCCCCGCGCCGCCGGCCGCAGGAGGCAGCCGCTACCGTCCGACGACGACGACGACGGCGGCGGCGACGGCGACCAGCGCCACCGCCGCGTGCCGCTGGTTCCGGTGGCCCCCGCCCGCGCAGGCGCCCGTGAGGGGTCTGTGCTCCTTGCCGCATTCTGGCGGTGGCGGTGGTGGTGGTGAGGGTATGGGATCTGAAGGGGTCGGGAGGAGGAGGCGGGTGGTGGCGCCTGCGGTGAACGGGGTGGCGAAGGACGGGGCGCCACAGCCGCCTCCGCCCAAGCTGCTCACGCTGCCCACCGTGCTCACCATTGGCCGCGTCGCCGCCGTGCCGCTCCTGATAAGCACTTTCTACATGGAGGGGCCTTGGGCAGCAACTGCGACAACTGGCATCTTCCTTGCTGCTGCAGTCACT-GATTGGCTAGATGGTTATATTGCGAGAAAGATGCAGTTAGGAACACCTTTTGGTGCATTTCTTGATCCTGTGGCTGACAAGCTTATGGTAGCTGCAACATTAGTGTTGCTGTGCACCAAACCTTTGGAAATT-TCACTGCTCAGAGATGGGCCATGGCTTCTAACGGTTCCTGCCATTGCTATTATTGGGAGAGAGATCACAATGTCAGCTGTGAGAGAATGGGCTGCGTCTCAGAATACCAAAGTTCTTGAGGCTGTGGCAGTTAACAATTTGGGGAAGTGGAAGACCGCAACGCAGATGACAGCATTGACTATCCTCCTTGCGAGCAGAGACAAAAGTCTTCCTGCACAAGATGCTCTGGTTACTTCCGGCATCGCATTGCTTTATGTATCAGCTGGACTTGCCATATGGTCCCTAGTGGTGTACATGAGAAAGATATGGCGGATACTTCTAAAATAGCCGTAGCACATAGTGTAATAGAAGGAACAGGAGCAAGCCAGCAAGGTGATATTACATTTCAAGAGCATACAATTTTTGAACTGCGGAGTTGATTGATGGACCTAGAATTGGTTGAGATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTTGCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCA-AGTAGTATGTTGCCC-GGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGCTCGAGTGTTGGACA-CTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGAATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTAAGTTTACCCATATGATATGTCAGAAGCGAACATTATTCTTTGGAAAAAAAAAATTCTTGTTGTGCATTTGAGCCATTTAACCAAATCT]

[+] EMBL AK070093             [AACTCCTCCCTCCTCCTCCTCCCACGTCCCCCGCACCTTTCCCCCCAACCCGCAGCCCAAACAAGAGGGAATCGACCAATCAATCCATCAATCAATCAACCGATCCGACCCATGCCCCCATCCGTCGCCACCCACGCATCCCTCCTCCTCAAAGCCGCCGCCGCAGCCGCGCACCTCCACCCCAAGCCCTTCTTCTCCCCACGCGCGGCGCCGCCGCGG AT CCCGTCTGCCCCCGCGCCGCCGGCCGCAGGAGGCAGCCGCTACCGTCCGACGACGACGACGACGGCGGCGGCGACGGCGACCAGCGCCACCGCCGCGTGCCGCTGGTTCCGGTGGCCCCCGCCCGCGCAGGCGCCCGTGAGGGGTCTGTGCTCCTTGCCGCATTCTGGCGGTGGCGGTGGTGGTGGTGAGGGTATGGGATCTGAAGGGGTCGGGAGGAGGAGGCGGGTGGTGGCGCCTGCGGTGAACGGGGTGGCGAAGGACGGGGCGCCACAGCCGCCTCCGCCCAAGCTGCTCACGCTGCCCACCGTGCTCACCATTGGCCGCGTCGCCGCCGTGCCGCTCCTGATAAGCACTTTCTACATGGAGGGGCCTTGGGCAGCAACTGCGACAACTGGCATCTTCCTTGCTGCTGCAGTCACT GATTGGCTAGATGGTTATATTGCGAGAAAGATGCAGTTAGGAACACCTTTTGGTGCATTTCTTGATCCTGTGGCTGACAAGCTTATGGTAGCTGCAACATTAGTGTTGCTGTGCACCAAACCTTTGGAAATT TCACTGCTCAGAGATGGGCCATGGCTTCTAACGGTTCCTGCCATTGCTATTATTGGGAGAGAGATCACAATGTCAGCTGTGAGAGAATGGGCTGCGTCTCAGAATACCAAAGTTCTTGAGGCTGTGGCAGTTAACAATTTGGGGAAGTGGAAGACCGCAACGCAGATGACAGCATTGACTATCCTCCTTGCGAGCAGAGACAAAAGTCTTCCTGCACAAGATGCTCTGGTTACTTCCGGCATCGCATTGCTTTATGTATCAGCTGGACTTGCCATATGGTCCCTAGTGGTGTACATGAGAAAGATATGGCGGATACTTCTAAAATAGCCGTAGCACATAGTGTAATAGAAGGAACAGGAGCAAGCCAGCAAGGTGATATTACATTTCAAGAGCATACAATTTTTGAACTGCGGAGTTGATTGATGGACCTAGAATTGGTTGAGATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTTGCTAAGCTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCA AGTAGTATGTTGCCC GGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGCTCGAGTGTTGGACA CTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGAATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTAAGTTTACCCATATGATATGTCAGAAGCGAACATTATTCTTTGGACAAGTGGTGTTCTTGTTGTGCATTTGAGCCATTTAACCAAATCT]
[+] EMBL OSC31531             [                                                            ACAAGAGGGAATCGACCAATCAATCCATCAATNAATCAACCGATCCGACCCATGCCCCCATCCNTCGCCACCCACGCATCCNTCCTCCTCAAAGCCGCCGCCGCAGCCGCGCACCTCCACCCCAAGCCCTTCTTCTCCCCACGCGCGGCGCCGACGGAA ATCCCCGTNTGCCCACNCGCCGNCGGCCGCAGGAGGCAGCCGCTACCGTCCGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU091459             [                                                                                                  ACCGATCCGACCCATGCCCCCATCCGTCGCCACCCACGCATCCCTCCTCCTCAAAGCCGCCGCCGCAGCCGCGCACNTCCACNCCAAGCCCTTCTTCTCCCCACGCGCGGCGCCGCCGGGGAAT CCCGTCTGCCCCCGCGCCGCCGGCCGCAGGAGGCAGCCGCTACCGTCCGACGACGACGACGACGGCGGCGGCGACGGCGACCAGCGCCANCGCCGCGTGCCGCTGGTTCCGGTGGCCCCCGCCCGCGCAGNCGCCCGTGA NGGTCTGTGCTCCTTGCCGCATTCTGGCGGTGGCGGTGGTGGTGGTGANGGTATGGGATCTGAAGGGGTCGGGAGGAGGAGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU181491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGGCGCCACAGCCGCCTCCGCCCAAGCTGCTCACGCTGCCCACCGTGCTCACCATTGGCCGNGTCGCCGCCGTGCCGCTCCTGATAAGCACTTTCTACATGGAGGGGCCTTGGGCAGCAACTGCGACAACTGGCATCTTCCTTGCTGCTGCAGTCACT GATTGGCTAGATGGTTATATTGCGAGAAAGATGCAGATAGGAACACCTTTTGGTGCATTTCTTGATCCTGTGGCTGACAAGCTTATGGTAGCTGCAACATTAGTGTTGCTGTGCACCAAACCTTGGGAAATTNNCACTGCTCANAGATGGGCCATGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU166663             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGGCGCCACAGCCGCCTCCGCCCAAGCTGCTCACGCTGCCCACCGTGCTCACCATTGGCCGCGTCGCCGCCGTGCCGCTCCTGATAAGCACTTTCTACATGGAGGGGCCTTGGGCAGCAACTGCGACAACTGGCATCTTCCTTGCTGCTGCAGTCACTGGATTGGCTAGATGGTTATATTGCGAGAAAGATGCAGTTAGGAACACCTTTTGGTGCATTTCTTGATCCTGTGGCTGACAAGCTTATGGTAGCTGCAACATTAGTGTTGCTGTGCACCAAACCTTTGGAAATT TCACTGCTCAGAGATGGGCCATGGCTTCTAACGGTTCCTGCCATTGCTATTATTGGGAGAGAGATCACAATGTCAGCTGTGAGAGAATGGGCTGCGTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK060009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCTGCCCACCGTGCTCACCATTGGCCGCGTCGCCGCCGTGCCGCTCCTGATAAGCACTTTCTACATGGAGGGGCCTTGGGCAGCAACTGCGACAACTGGCATCTTCCTTGCTGCTGCAGTCACT GATTGGCTAGATGGTTATATTGCGAGAAAGATGCAGTTAGGAACACCTTTTGGTGCATTTCTTGATCCTGTGGCTGACAAGCTTATGGTAGCTGCAACATTAGTGTTGCTGTGCACCAAACCTTTGGAAATT TCACTGCTCAGAGATGGGCCATGGCTTCTAACGGTTCCTGCCATTGCTATTATTGGGAGAGAGATCACAATGTCAGCTGTGAGAGAATGGGCTGCGTCTCAGAATACCAAAGTTCTTGAGGCTGTGGCAGTTAACAATTTGGGGAAGTGGAAGACCGCAACGCAGATGACAGCATTGACTATCCTCCTTGCGAGCAGAGACAAAAGTCTTCCTGCACAAGATGCTCTGGTTACTTCCGGCATCGCATTGCTTTATGTATCAGCTGGACTTGCCATATGGTCCCTAGTGGTGTACATGAGAAAGATATGGCGGATACTTCTAAAATAGCCGTAGCACATAGTGTAATAGAAGGAACAGGAGCAAGCCAGCAAGGTGATATTACATTTCAAGAGCATACAATTTTTGAACTGCGGAGTTGATTGATGGACCTAGAATTGGTTGAGATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTTGCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCA AGTAGTATGTTGCCC GGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGCTCGAGTGTTGGACA CTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGAATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTAAGTTTACCCATATGATATGTCAGAAGCGAACATTA                                                     ]
[+] EMBL BQ907057             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgCTGCTCAGAGATGGGCCATGGCTTCTAACGGTTCCTGCCATTGCTATTATTGGGAGAGAGATCACAATGTCAGCTGTGAGAGAATGGGCTGCGTCTCAGAATACCAAAGTTCTTGAGGCTGTGGCAGTTAACAATTTGGGGAAGTGGAAGACCGCAACGCAGATGACAGCATTGACTATCCTCCTTGCGAGCAGAGACAAAAGTCTTCCTGCACAAGATGCTCTGGTTACTTCCGGCGTCGCATTGCTTTATGTATCAGCTGGACTTGCCATATGGTCCCTAGTGGTGTACATGAGAAAGATATGGCGGATACTTCTAAAATA CCGTAGCACATAGTGTAATAGAAGGAACAGGAGCAAGCCAGCAAGGTGATATTACATTTCAAGAGCATACAATTTTTGAACTGCGGAGTTGATTGATGGACCTAGAAa                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OS0678A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTCTTCCTGCACAAGATGCTCTGGTTACTTCCGGCATCGCATTGCTTTATGTATCAGCTGGACTTGCCATATGGTCCCTAGTGGTGTACATGAGAAAGATATGGCGGATACTTCTAAAATAGCCGTAGCACATAGTGTAATAGAAGGAACAGGAGCAAGCCAGCAAGGTGATATTACATTTCAAGAGCATACAATTTTTGAACTGCGGAGTTGATTGATGGACCTAGAATTGGTTGAGATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTTGCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCA AGTAGTATGTTGCCC GGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGCTCGAGTGTTGGACA CTGGGTGTAATG                                                                                                                                                                                               ]
[+] EMBL BI810024             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAGAAAGATATGCCGGATACTTCTAAAATAGCCGTAGCACATAGTGTAATAGAAGGAACAGGAGCAAGCCAGCAAGGTGATATTACATTTCAAGAGCATACCATTTTTGAACTGCGGAGTTGATTGATGGACCTAGAATTGGTTGAGATCCTCAGCTACTTACGCATTGTCTCAGTTT GCGGATTAGTTGCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACCAAAAACATAGTAGCACAGTAGTATGTTGCCC GGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGCTCGAGTGTTGGACACCTAGGTGTAATGATCTGCCAAACTGAAAAATGCAGAAGATTGTAACCGTATACGAATAC AAACCATGAGGTTTGA  GTGTGACTCTGGGGTTTCTATAGTTTCTACCCTTGTAAGTTTACCCATATGATATGTCAGAAGCGAACCTTATTCTTTGGAAAAAAAAAA                                   ]
[+] EMBL AU166662             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTGTAATAGAAGGAACAGGAGCAAGCCAGCAAGGTGATATTACATTTCAAGAGCATACAATTTTTGAACTGCGGAGTTGATTGATGGACCTAGAATTGGTTGAGATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTTGCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCA AGTAGTATGTTGCCCGGGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCNCGGCTCGAGTGTTGGACA CTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGAATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTAAGTTTACCCATATGATATGTCAGAAGCGAACATTATTCTTTGGAAAAAAAAAAa                                  ]
[+] EMBL CF327208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATAGTAGCA AGTAGTATGTTGCCC GGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGCTCGAGTGTTGGACA CTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGAATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTAAGTTTACCCATATGATATGTCAGAAGCGAACATTATTCTT   AAAAAAAA                                     ]
[-] EMBL CF327207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAGTAGCA AGTAGTATGTTGCCC GGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGCTCGAGTGTTGGACA CTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGAATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTAAGTTTACCCATATGATATGTCAGAAGCGAACATTATTCTT   AAAAAAAAA                                    ]


>consensus_13623#0 AACTCCTCCCTCCTCCTCCTCCCACGTCCCCCGCACCTTTCCCCCCAACCCGCAGCCCAA ACAAGAGGGAATCGACCAATCAATCCATCAATCAATCAACCGATCCGACCCATGCCCCCA TCCGTCGCCACCCACGCATCCCTCCTCCTCAAAGCCGCCGCCGCAGCCGCGCACCTCCAC CCCAAGCCCTTCTTCTCCCCACGCGCGGCGCCGCCGGGGATCCCGTCTGCCCCCGCGCCG CCGGCCGCAGGAGGCAGCCGCTACCGTCCGACGACGACGACGACGGCGGCGGCGACGGCG ACCAGCGCCACCGCCGCGTGCCGCTGGTTCCGGTGGCCCCCGCCCGCGCAGGCGCCCGTG AGGGGTCTGTGCTCCTTGCCGCATTCTGGCGGTGGCGGTGGTGGTGGTGAGGGTATGGGA TCTGAAGGGGTCGGGAGGAGGAGGCGGGTGGTGGCGCCTGCGGTGAACGGGGTGGCGAAG GACGGGGCGCCACAGCCGCCTCCGCCCAAGCTGCTCACGCTGCCCACCGTGCTCACCATT GGCCGCGTCGCCGCCGTGCCGCTCCTGATAAGCACTTTCTACATGGAGGGGCCTTGGGCA GCAACTGCGACAACTGGCATCTTCCTTGCTGCTGCAGTCACTGATTGGCTAGATGGTTAT ATTGCGAGAAAGATGCAGTTAGGAACACCTTTTGGTGCATTTCTTGATCCTGTGGCTGAC AAGCTTATGGTAGCTGCAACATTAGTGTTGCTGTGCACCAAACCTTTGGAAATTTCACTG CTCAGAGATGGGCCATGGCTTCTAACGGTTCCTGCCATTGCTATTATTGGGAGAGAGATC ACAATGTCAGCTGTGAGAGAATGGGCTGCGTCTCAGAATACCAAAGTTCTTGAGGCTGTG GCAGTTAACAATTTGGGGAAGTGGAAGACCGCAACGCAGATGACAGCATTGACTATCCTC CTTGCGAGCAGAGACAAAAGTCTTCCTGCACAAGATGCTCTGGTTACTTCCGGCATCGCA TTGCTTTATGTATCAGCTGGACTTGCCATATGGTCCCTAGTGGTGTACATGAGAAAGATA TGGCGGATACTTCTAAAATAGCCGTAGCACATAGTGTAATAGAAGGAACAGGAGCAAGCC AGCAAGGTGATATTACATTTCAAGAGCATACAATTTTTGAACTGCGGAGTTGATTGATGG ACCTAGAATTGGTTGAGATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTT GCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCAAGTAGTAT GTTGCCCGGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGCTCGAGTGTT GGACACTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGA ATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTA AGTTTACCCATATGATATGTCAGAAGCGAACATTATTCTTTGGAAAAAAAAAATTCTTGT TGTGCATTTGAGCCATTTAACCAAATCT



consensusID : consensus_13623#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 326
fasta sequence
                              [TGGNCCTAGAATTGGTTGANATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTTGCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCAAGTAGTATGTTGCCCGGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGNTCGAGTGTTGGACACTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGAATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTAAGTTTNCCCAAAAAAAAAAAAAA]

[+] EMBL AU031099             [TGGNCCTAGAATTGGTTGANATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTTGCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCAAGTAGTATGTTGCCCGGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGNTCGAGTGTTGGACACTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGAATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTAAGTTTNCCCAAAAAAAAAAAAAA]


>consensus_13623#1 TGGNCCTAGAATTGGTTGANATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTA GTTGCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCAAGTAG TATGTTGCCCGGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGNTCGAGT GTTGGACACTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATA CGAATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATT GTAAGTTTNCCCAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13623#0      AACTCCTCCCTCCTCCTCCTCCCACGTCCCCCGCACCTTTCCCCCCAACCCGCAGCCCAA 60
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      ACAAGAGGGAATCGACCAATCAATCCATCAATCAATCAACCGATCCGACCCATGCCCCCA 120
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      TCCGTCGCCACCCACGCATCCCTCCTCCTCAAAGCCGCCGCCGCAGCCGCGCACCTCCAC 180
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      CCCAAGCCCTTCTTCTCCCCACGCGCGGCGCCGCCGGGGATCCCGTCTGCCCCCGCGCCG 240
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      CCGGCCGCAGGAGGCAGCCGCTACCGTCCGACGACGACGACGACGGCGGCGGCGACGGCG 300
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      ACCAGCGCCACCGCCGCGTGCCGCTGGTTCCGGTGGCCCCCGCCCGCGCAGGCGCCCGTG 360
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      AGGGGTCTGTGCTCCTTGCCGCATTCTGGCGGTGGCGGTGGTGGTGGTGAGGGTATGGGA 420
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      TCTGAAGGGGTCGGGAGGAGGAGGCGGGTGGTGGCGCCTGCGGTGAACGGGGTGGCGAAG 480
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      GACGGGGCGCCACAGCCGCCTCCGCCCAAGCTGCTCACGCTGCCCACCGTGCTCACCATT 540
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      GGCCGCGTCGCCGCCGTGCCGCTCCTGATAAGCACTTTCTACATGGAGGGGCCTTGGGCA 600
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      GCAACTGCGACAACTGGCATCTTCCTTGCTGCTGCAGTCACTGATTGGCTAGATGGTTAT 660
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      ATTGCGAGAAAGATGCAGTTAGGAACACCTTTTGGTGCATTTCTTGATCCTGTGGCTGAC 720
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      AAGCTTATGGTAGCTGCAACATTAGTGTTGCTGTGCACCAAACCTTTGGAAATTTCACTG 780
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      CTCAGAGATGGGCCATGGCTTCTAACGGTTCCTGCCATTGCTATTATTGGGAGAGAGATC 840
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      ACAATGTCAGCTGTGAGAGAATGGGCTGCGTCTCAGAATACCAAAGTTCTTGAGGCTGTG 900
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      GCAGTTAACAATTTGGGGAAGTGGAAGACCGCAACGCAGATGACAGCATTGACTATCCTC 960
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      CTTGCGAGCAGAGACAAAAGTCTTCCTGCACAAGATGCTCTGGTTACTTCCGGCATCGCA 1020
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      TTGCTTTATGTATCAGCTGGACTTGCCATATGGTCCCTAGTGGTGTACATGAGAAAGATA 1080
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      TGGCGGATACTTCTAAAATAGCCGTAGCACATAGTGTAATAGAAGGAACAGGAGCAAGCC 1140
consensus_13623#1      ------------------------------------------------------------
                                                                                   

consensus_13623#0      AGCAAGGTGATATTACATTTCAAGAGCATACAATTTTTGAACTGCGGAGTTGATTGATGG 1200
consensus_13623#1      ---------------------------------------------------------TGG 3
                                                                                ***

consensus_13623#0      ACCTAGAATTGGTTGAGATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTT 1260
consensus_13623#1      NCCTAGAATTGGTTGANATCCTCAGCTACTTACGCATTGTCTCAGTTTGGCGGATTAGTT 63
                        *************** *******************************************

consensus_13623#0      GCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCAAGTAGTAT 1320
consensus_13623#1      GCTAAGTTGCTGTGCCTGCAAGATCTCCGTAGAAACAAAAAACATAGTAGCAAGTAGTAT 123
                       ************************************************************

consensus_13623#0      GTTGCCCGGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGCTCGAGTGTT 1380
consensus_13623#1      GTTGCCCGGGTGATTACTTCTTCGAAAGCTATTTTCAGAGCCTATCACGGNTCGAGTGTT 183
                       ************************************************** *********

consensus_13623#0      GGACACTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGA 1440
consensus_13623#1      GGACACTGGGTGTAATGATCTGCAAAACTGAAAAATGCAGAAGATTGTAACCGTATACGA 243
                       ************************************************************

consensus_13623#0      ATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTA 1500
consensus_13623#1      ATACAAAACCATGAGGTTTGAGTGTGTGACTCTGGGGTTTCTATAGTTTCTACCATTGTA 303
                       ************************************************************

consensus_13623#0      AGTTTACCCATATGATATGTCAGAAGCGAACATTATTCTTTGGAAAAAAAAAATTCTTGT 1560
consensus_13623#1      AGTTTNCCCAAAAAAAAAAAAAA------------------------------------- 326
                       ***** **** *  * *    *                                      

consensus_13623#0      TGTGCATTTGAGCCATTTAACCAAATCT 1588
consensus_13623#1      ----------------------------
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)