These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13633#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1486 fasta sequence [CCCCATTTCGGTGCTTAACCAAACTCACCATAATATCAGTTCATCCACAACAATGTCGGCCTACTGCGGCAAGTACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCGCCAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGAGCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATCAGCGGCGTGATCCTCTTCGACGAGACCCTCTACCAGAAGACCAAGGATGGCAAGCCCTTCGTCGATG-TCCTCAAGGA-GGCCGGTGCCCTCCC-CGGCA-TCAAGGT-GGACAAGGGCACCATCGAGGTCGCC-GGCACCGACAAGGAGACCACCACCCAGGGCCAC-GATGACC-TCGGCAAGCAATGCGCCAAGTACTACGAGGCCGGTGCCCGCTTCGCCAAGTGGCGTGCCGTCCTCAAGATCGGACCCAACCAGCCCTCCCAGCTTGCCATTGATCTGAACGCCCAGGGCCTTGCTTGCTACGCCATCATCTGCCAGGAGAACGGGCTGGTGCCGATCGTCGAGCCGGAGATCCTCGTCGATGGCCCTCACGACATCGATCGATGCGCGTACGTCTCCGAGGTGGTCCTCGCCGCGTGCTACAAGGCGCTGAACGAGCACCATGTCCTCCTCGAGGGCACCCTCCTGAAGCCCAACATGGTCACCCCGGGTTCCGACGCCAAGAAGGTGGCGCCGGAGGTCATCGCGGAGTACACCGTCCGCACCCTCCAGAGGACCGTCCCTCCTGCTGTGCCGGCCA-TCGTCTTCCT-CTCCGGTGGAC-AGA-GCG-AGG-AGG-AGGCGA-CGCTG-AACCTGAACGCCATGAACAAGCT-CAGCGCCAAGAAGCCGTGGTCGCTGTCCTTCT-CCTTTGGCCGTGCCCTGCAGCAGAGCACGCTCAAGG-CCTGGGCTGGCAAGACGGAGAACGTAGAGAAGGCCAGGGCGGCCTTCCTCGTCAGGTGCAAGGCCAACTCCGAGGCTACCCTGGGTACTTACAAGGGTGATGCTGTCCTCGGCGAGGGCGCTGCTGAAAGCCTGCACGTCAAGGACTACAAGTACTGATCTG-CAT-CAGGCGCTGGCCTGCTATGGCTTGGCTACCTG-ATCGATTTCCCATTCTGGGGCCGTTACATAATGCGGTTTTGATATCTAGAGGCTCTAACAGGATTCACAATTTCGGATCGGAATTTCAGAATTTTTCCCTTTCCGATAGATCGAACCCTGGAGCACAATATATCTGTGGTTATCTAAAAGCCTTGTCTTAATAATCCAGAACCTTTTTTTTTCTTGTAAAATATTTGCTGATGAACATCAGCTGGCCCGGAGTTTTTATTTTTATCAATCACTTTGTAACTGTCTGATTTGCCCGGTGCTGTGTGATTTTGTTGAATGAAATTAACTTCACTTCTTTGAGTTTAAAAA] [+] EMBL AK099184 [CCCCATTTCGGTGCTTAACCAAACTCACCATAATATCAGTTCATCCACAACAATGTCGGCCTACTGCGGCAAGTACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCGCCAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGAGCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATCAGCGGCGTGATCCTCTTCGACGAGACCCTCTACCAGAAGACCAAGGATGGCAAGCCCTTCGTCGATG TCCTCAAGGA GGCCGGTGCCCTCCC CGGCA TCAAGGT GGACAAGGGCACCATCGAGGTCGCC GGCACCGACAAGGAGACCACCACCCAGGGCCAC GATGACC TCGGCAAGCAATGCGCCAAGTACTACGAGGCCGGTGCCCGCTTCGCCAAGTGGCGTGCCGTCCTCAAGATCGGACCCAACCAGCCCTCCCAGCTTGCCATTGATCTGAACGCCCAGGGCCTTGCTTGCTACGCCATCATCTGCCAGGAGAACGGGCTGGTGCCGATCGTCGAGCCGGAGATCCTCGTCGATGGCCCTCACGACATCGATCGATGCGCGTACGTCTCCGAGGTGGTCCTCGCCGCGTGCTACAAGGCGCTGAACGAGCACCATGTCCTCCTCGAGGGCACCCTCCTGAAGCCCAACATGGTCACCCCGGGTTCCGACGCCAAGAAGGTGGCGCCGGAGGTCATCGCGGAGTACACCGTCCGCACCCTCCAGAGGACCGTCCCTCCTGCTGTGCCGGCCA TCGTCTTCCT CTCCGGTGGAC AGA GCG AGG AGG AGGCGA CGCTG AACCTGAACGCCATGAACAAGCT CAGCGCCAAGAAGCCGTGGTCGCTGTCCTTCT CCTTTGGCCGTGCCCTGCAGCAGAGCACGCTCAAGG CCTGGGCTGGCAAGACGGAGAACGTAGAGAAGGCCAGGGCGGCCTTCCTCGTCAGGTGCAAGGCCAACTCCGAGGCTACCCTGGGTACTTACAAGGGTGATGCTGTCCTCGGCGAGGGCGCTGCTGAAAGCCTGCACGTCAAGGACTACAAGTACTGATCTG CAT CAGGCGCTGGCCTGCTATGGCTTGGCTACCTG ATCGATTTCCCATTCTGGGGCCGTTACATAATGCGGTTTTGATATCTAGAGGCTCTAACAGGATTCACAATTTCGGATCGGAATTTCAGAATTTTTCCCTTTCCGATAGATCGAACCCTGGAGCACAATATATCTGTGGTTATCTAAAAGCCTTGTCTTAATAATCCAGAACCTTTTTTTTTCTTGTAAAATATTTGCTGATGAACATCAGCTGGCCCGGAGTTTTTATTTTTATCAATCACTTTGTAACTGTCTGATTTGCCCGGTGCTGTGTGATTTTGTT ] [+] EMBL AK071547 [ GCTTAACCAAACTCACCATAATATCAGTTCATCCACAACAATGTCGGCCTACTGCGGCAAGTACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCGCCAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGAGCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATCAGCGGCGTGATCCTCTTCGACGAGACCCTCTACCAGAAGACCAAGGATGGCAAGCCCTTCGTCGATG TCCTCAAGGA GGCCGGTGCCCTCCC CGGCA TCAAGGT GGACAAGGGCACCATCGAGGTCGCC GGCACCGACAAGGAGACCACCACCCAGGGCCAC GATGACC TCGGCAAGCAATGCGCCAAGTACTACGAGGCCGGTGCCCGCTTCGCCAAGTGGCGTGCCGTCCTCAAGATCGGACCCAACCAGCCCTCCCAGCTTGCCATTGATCTGAACGCCCAGGGCCTTGCTTGCTACGCCATCATCTGCCAGGAGAACGGGCTGGTGCCGATCGTCGAGCCGGAGATCCTCGTCGATGGCCCTCACGACATCGATCGATGCGCGTACGTCTCCGAGGTGGTCCTCGCCGCGTGCTACAAGGCGCTGAACGAGCACCATGTCCTCCTCGAGGGCACCCTCCTGAAGCCCAACATGGTCACCCCGGGTTCCGACGCCAAGAAGGTGGCGCCGGAGGTCATCGCGGAGTACACCGTCCGCACCCTCCAGAGGACCGTCCCTCCTGCTGTGCCGGCCA TCGTCTTCCT CTCCGGTGGAC AGA GCG AGG AGG AGGCGA CGCTG AACCTGAACGCCATGAACAAGCT CAGCGCCAAGAAGCCGTGGTCGCTGTCCTTCT CCTTTGGCCGTGCCCTGCAGCAGAGCACGCTCAAGG CCTGGGCTGGCAAGACGGAGAACGTAGAGAAGGCCAGGGCGGCCTTCCTCGTCAGGTGCAAGGCCAACTCCGAGGCTACCCTGGGTACTTACAAGGGTGATGCTGTCCTCGGCGAGGGCGCTGCTGAAAGCCTGCACGTCAAGGACTACAAGTACTGATCTG CAT CAGGCGCTGGCCTGCTATGGCTTGGCTACCTG ATCGATTTCCCATTCTGGGGCCGTTACATAATGCGGTTTTGATATCTAGAGGCTCTAACAGGATTCACAATTTCGGATCGGAATTTCAGAATTTTTCCCTTTCCGATAGATCGAACCCTGGAGCACAATATATCTGTGGTTATCTAAAAGCCTTGTCTTAATAATCCAGAACCTTTTTTTTTCTTGTAAAATATTTGCTGATGAACATCAGCTGGCCCGGAGTTTTTATTTTTATCAATCACTTTGTAACTGTCTGATTTGCCCGGTGCTGTGTGATTTTGTTGAATGAAATTAACTTCACTT ] [+] EMBL C71711 [ ATCCACAACAATGTCGGCCTACTGCGGCAAGTACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCGCCAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGAGCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATCAGCGGCGTGATCCTCTTCGACGAGACCCTCTACCAGAAGACCAAGGATGGCAAGCCCTTCGTCGATG TCCTCAAGGA GGCCGGTGCCCTCCC CGGNA TCAAGGT GGACAAGGNCACCATCGAGGTCGCC GGNAACGGCAAGGgn ] [+] EMBL AU163624 [ TCCACAACAATGTCGGCCTACTGCGGCAAGTACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCGCCAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGAGCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATCAGCGGCGTGATCCTCTTCGACGAGACCCTCTACCAGAAGACCAAGGATGGCAAG CCTTCGTCGATG TCCTCAAGGA GGCCGGTGGCCTCCC CGGCATTCAAGGTGGGACAAGGGGACCATCGAGGTCGCCGGGCACCGACAAGGAGACCACCACCCAGGGCCAC GATGACCTTCGGCAAGCATTGCGCCAAGTACTACGAGG CGGTTGCCGTTTTNGCAATTGGg ] [+] EMBL C72683 [ TCCACAACAATGTCGGCCTACTGCGGCAAGTACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCGCCAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGANCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATNAGCGGCGTGATNCTCTTCGACGAGACCCTCTACCAGAAGACCA ] [+] EMBL AU063759 [ AATGTCGGCCTACTGCGGCAAGTACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCGCCAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGAGCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATCAGCGGCGTGATCCTCTTCGACGAGACCCTCTACCAGAAGACCAAGGATGGCAAGCCCTTCGTCGATG TCCTCAAGGA GGCCGGTGCCCTCCCNCGGCA TCAAGGT GGACAAGGGCACCATCGAGG ] [+] EMBL AU065144 [ AATGTCGGCCTACTGCGGCAAGTACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCGCCAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGAGCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATCAGCGGCGTGATCCTCTTCGACGAGACCCTCTACCAGAAGACCAAGGATNGGAAGCCCTTCGTCGATGTTCNTCAAGGAGGGCCGGTtgc ] [+] EMBL AU063758 [ AATGTCGGCCTACTGCGGCAAGTACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCG CAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGAGCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATCAGCGGCGTGATCCTCTTCGACGAGACCCTCTACCAGAAGACCAAGGATGGCAAGCCCTTCGTCGATG TCCTCAAGGA GGCCGGTGCCTTCCC CGGCA TCAAGGT TGACAAGGGCACCATC ] [+] EMBL C74586 [ ACAAAGATGAGCTCATAAAGAATGCTGCCTACATTGGCACCCCGGGCAAGGGTATCCTCGCTGCGGACGAGTCCACTGGCACCATCGGCAAGCGCTTCGCCAGCATCAATGTTGAGAACGTCGAGGATAACCGCCGTGCCTTCCGCGAGCTCCTCTTCTGCACCCCTGGCGCCCTCCAGTACATCAGCGGCGTGATCCTCTTCGACGAGACCCTCTACCAGAAGACCAAGGATGGCAAGCCCTTCGTCGATG TCCTCAAGGA GGCCGGTGCCCTCCC CGGCA TCAAGGT GGACAAGGGCACCATCGAGGTCGCC GGCACCGACAAGGAGACCACCACCCAGGGCCACGGTTGACC TGGGNAAGCAAT ] [+] EMBL AU094990 [ TCACCCCGGTTTCCGACGCNAAGAAGTTGGCGCCGGA GTCATCGCGGAGTACACCGTCCGNACCCTCCAGAGGACCGTCCCTCCTGCTGTGCCGGCNA TCGTCTTCCT CTCCGGTGGAC AGA GCG AGG AGG AGGCGA CGCTG AACCTGAACGCCATGAACAAGCT CAGCGCCAAGAAGCCGTGGTCGCTGTCCTTCT CCTTTGGCCGTGCCCTGCAGCAGAGCACGCTCAAGG CCTGGGCTGGCAAGACGGAGAACGTAGAGAAGGCCAGGGCGGCCTTCCTCGTCAGGTGCAAGGCCAACTCCGAGGCTACCCTGGGTACTTACAAGGGTGATGCTGTCCTCGGCGAGGGCGCTGCTGAAAGCCTGCACGTCAAGGACTACAAGTACTGATCTG CAT CAGGCGCTGGCCTGCTATGGCTTGGCTACCTG ATCGATTTCCCATTCTGGGGCCGTTACATAATGCGGTTTTGATATCTAGAGGCTCTAACAGGATTCACAATTTCGGATCGGAATTTCAGAATTTTTCCCTTTCCGATAGATCGAACCCTGGAGCACAATATATCTGTGGTTATCTAAAAGCCTTGTCTTAATAATCCAGAACCTTTTTTTTTCTTGTAAAATATTTGCTGATGAACATCAGCTGGCCCGGAGTTTTTATTTTTATCAATCACTTTGTAACTGTCTGATTaaaaa ] [+] EMBL AU165518 [ CCANTCGTCTTCCTCCTCCGGTGGACAAGA NCGAAGG AGG AGGCGACCGNTG AA CTGAACGCCATGAACAAGCT CAGCGCCAAGAAGCCGTGGTCGCTGTCCTTCTCCCTTTGGCCGTNCCCTGCAGCAGAGCACGCTCAAGG CCTGGGCTGGCAAGACGGAGAACGTAGAGAAGGCCAGGGCGGCCTTCCTCGTCAGGTGCAAGGCCAACTCCGAGGCTACCCTGGGTACTTACAAGGGTGATGCTGTCCTCGGCGAGGGCGCTGCTGAAAGCCTGCACGTCAAGGACTACAAGTACTGATCTG CAT CAGGCGCTGGCCTGCTATGGCTTGGCTACCTG ATCGATTTCCCATTCTGGGGCCGTTACATAATGCGGTTTTGATATCTAGAGGCTCTAACAGGATTCACAATTTCGGATCGGAATTTCAGAATTTTTCCCTTTCCGATAGATCGAACCCTGGAGCACAATATATCTGTGGTTATCTAAAAGCCTTGTCTTAATAATCCAGAACCTTTTTTTTTCTTGTAAAATATTTGCTGATGAACATCAGNTGGCCCGGAGTTTTTATTTTTATCAATCACTTTGTAACTGTCTGATTTGCCCGGTGCTGTGTGATTTTGTTGAATGAAATTAACTTCACTTCaaaaa ] [+] EMBL C98409 [ acC AGANCCG AGGAAGGAAGGCGA CGCTGAAACNTGAACCCCTTGAACAAGCTCCAGCGCCAAGAA CCCTGGTCNCTGTCCTTCT CCTTTGGCCNTGCCCTGCAGCAGAGCACGCTCAAGGCCCTGGGCTGGCAAGACGGAGAACGTAGAGAAGGCCAGGGCGGCCTTCCTCGTCAGGTGCAAGGCCAACTCCGAGGCTACCCTGGGTACTTACAAGGGTGATGCTGTCCTCGGCGAGGGCGCTGCTGAAAGCCTGCACGTCAAGGACTACAAGTACTGATCTG CATCCAGGCGCTGGCCTGCTATGGCTTGGCTACCTGAATCGATTTCCCATTCTGGGGCCGTTACATAATGCGGTTTTGATATCTAGAGGCTCTAACAGGATTCACAATTTCGGATCGGAATTTCAGAATTTTTCCCTTTCCGATAGATCGAACCCTGGAGCACAATATATCTGTGGTTATCTAAAAGCCTTGTCTTAATAATCCAGAACCTTTTTTTTTCTTGTAAAATATTTGCTGATGAACATCAGCTGGCCCGGAGTTTTTATTTTTATCAATCACTTTGTAACTGTCTGATTTGCCCGGTGCTGTGTGATTTTGTTGAATGAAATTAACTTCACTTCTTTGAGTTTAAAAA] [+] EMBL C98879 [ TTACAAGGNTGAT CTGTCCTCGGCGAGGGCGCTGCTGAAAACCTGCACGTCAAGGACTACAAGTACTGATCTGCCAT CAGNCGCTGGCCTGCTATGGCTTGGCTACCTG ATCGA TTCCCCNTCTGGGCCCGTTACAT ATGCGGTTTTGATATCTAGAGGCTCTAACAGGATTCACAATTTCGGATCGGAATTTCAGAATTTTTCCCTTTCCGATAGATCGAACCCTGGAGCACAATATATCTGTGGTTATCTAAAAGCCTTGTCTTAATAATCCAGAACCTTTTTTTTTCTTGTAAAATATTTGCTGATGAACATCAGCTGGCCCGGAGTTTTTATTTTTATCAATCACTTTGTAACTGTCTGATTTGCCCGGTGCTGTGTGATTTTGTTGAATGAAATTAACTTCACTTCTTTGAGTTTAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||