cluster # 13634

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Oryza sativa
cluster # 13634 cluster # 13634 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13634#0 length = 1492 sequences # 11

consensus_13634#1 length = 880 sequences # 1
consensus_13634#2 length = 181 sequences # 1

consensusID : consensus_13634#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1492
fasta sequence

                              [TCTCTTCTCTCTTTTTCTCCCCTCTCCCCGGGGAAACGCGGCGGCCGCCGATCCCGATCCCCCCCACCGCCGCCGCCGCCCGATCCGACCAAATCCCCACTACGCGTCCCAATTCCGGGCCAATTCGACCCCCCGAGCGACCGCCATCTACTCACCTCCCGATCGATTCGGATCCCCAATCTAGCGGGCGCGGGGCGGGGCGGGGAGGCGGGATTGGGCTAGGGTTTTGTGGGGGATTGGTGTATTGGATTAGGTGATGGCGGAGAAGGGATGCCTCAAGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATTGGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTACGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAACTCC-TAGCGG-AAGG-TTTGCCCCTCACAAAAGAA-TATGCC-TAT-CAATGAGTGACTTTCAT-CCGGAA-TCTT-GGAATCCTATG-TGGTCTGTGGCAAG-CATTCTCACGGGCCTCCTTT-CATT-CATGATGGATGATGCTCTGACAACTGGAAGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTTAGCAAAGGCTTCCCTTGCCTACAACTGTGAGAGCAAAAATTGCCCTCACTTCAGGAAAATGTTTCCAGAGTACGTCGAGAAATA-CAACCAACAGAAACAGATGGAGCAAACCGTAGCGGAACCAGAAACTCAAGAGAACCCTGCCCCAGCTCCAT-CTCCTGCGGTCCAACAACAGGCTGCAGTAGTAGCCAAT-AAGGC-GAAACCTGCGGCGGAGGCCGCAGGCGAGC-AGAAGCAGAAGAAGCGAGTGCCCTTCTGGATGATGCTGGTTATGTTTTCTGTTTTTGGTGCGGTGATGGCCTTGCCCCTGATGCAACTCTGACAAATAAAATAAAAAGAGGCTATAAAAGTGTGATACCGGGGGGTAATTTTTGTATAGTTTTCCCAAGGTTTGCGTAACTCGATTCTTCTGTGGACTCTCTTCACTTTGGTGATGGTAAAATCTGTAGAACCATATCCTCTCTTTACAGAATCTACAGAACAGCTTTGTTTGA--AAAAAAAAAAAAAAAAAAACTCGCCGTGATGCAGGTGGTGGTTTGGGTGGCGGCGCCGGCGATGATACGGGCGGGGTCGACGACGGCGGTGATGACGGTGATGCTGGTGGCGTTCATGTTGGAGTACCTGCCAAAGATCTACCACTCCGTCGTCTTCCTCCGCCGGATGCAGAACCAGTCCGGCCACATCTTCGGCACCATCTGGTGGGGCATCGCCCTCAACCTCATAGCCTACTTCGTCGCCGCTCACGCGGTGGGCGCGTGCTGGTACTTGCTGGGGGTCCAGAGGGCCACCAAGTGCCTGAAGGAGCAGTGCTTGCTTGCCGGGCTGCCGGCGTGCG]

[+] EMBL AK065085             [TCTCTTCTCTCTTTTTCTCCCCTCTCCCCGGGGAAACGCGGCGGCCGCCGATCCCGATCCCCCCCACCGCCGCCGCCGCCCGATCCGACCAAATCCCCACTACGCGTCCCAATTCCGGGCCAATTCGACCCCCCGAGCGACCGCCATCTACTCACCTCCCGATCGATTCGGATCCCCAATCTAGCGGGCGCGGGGCGGGGCGGGGAGGCGGGATTGGGCTAGGGTTTTGTGGGGGATTGGTGTATTGGATTAGGTGATGGCGGAGAAGGGATGCCTCAAGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATTGGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTACGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAACTCC TAGCGG AAGG TTTGCCCCTCACAAAAGAA TATGCC TAT CAATGAGTGACTTTCAT CCGGAA TCTT GGAATCCTATG TGGTCTGTGGCAAG CATTCTCACGGGCCTCCTTT CATT CATGATGGATGATGCTCTGACAACTGGAAGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTTAGCAAAGGCTTCCCTTGCCTACAACTGTGAGAGCAAAAATTGCCCTCACTTCAGGAAAATGTTTCCAGAGTACGTCGAGAAATA CAACCAACAGAAACAGATGGAGCAAACCGTAGCGGAACCAGAAACTCAAGAGAACCCTGCCCCAGCTCCAT CTCCTGCGGTCCAACAACAGGCTGCAGTAGTAGCCAAT AAGGC GAAACCTGCGGCGGAGGCCGCAGGCGAGC AGAAGCAGAAGAAGCGAGTGCCCTTCTGGATGATGCTGGTTATGTTTTCTGTTTTTGGTGCGGTGATGGCCTTGCCCCTGATGCAACTCTGACAAATAAAATAAAAAGAGGCTATAAAAGTGTGATACCGGGGGGTAATTTTTGTATAGTTTTCCCAAGGTTTGCGTAACTCGATTCTTCTGTGGACTCTCTTCACTTTGGTGATGGTAAAATCTGTAGAACCATATCCTCTCTTTACAGAATCTACAGAACA                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU069200             [      CTCTCTTTTTCTCCCCTCTCCCCGGGGAAACGCGGCGGCCGCCGATCCCGATCCCCCCCACCGCCGCCGCCGCCCGATCCGACCAAATCCCCACTACGCGTCCCAATTCCGGGCCAATTCGACCCCCCGAGCGACCGCCATCTACTCACCTCCCGATCGATTCGGATCCCCAATCTAGCGGGCGCGGGGCGGGGCGGGGAGGCGGGATTNGGCTAGGGTTTTGTGGGGGATTGGTGTATTGGATTAGGTGATGGCGGAGAAGGGATGCCTCAAGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAANGAGCCGCCGCCGCAGATCGTNGCTCGCCCGCTGCCCAACGACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF314994             [                CTCCCCTCTCCCCGGGGAAACGCGGCGGCCGCCGATCCCGATCCCCCCCACCGCCGCCGCCGCCCGATCCGACCAAATCCCCACTACGCGTCCCAATTCCGGGCCAATTCGACCCCCCGAGCGACCGCCATCTACTCACCTCCCGATCGATTCGGATCCCCAATCTAGCGGGCGCGGGGCGGGGCGGGGAGGCGGGATTGGGCTAGGGTTTTGTGGGGGGTTGGTGTATTGGTTTAGGTGATGGCGGAGAAGGGATGCCTCAAGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATTGGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTACGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAACTCC TAGCGG AAGG TTTGCCCCTCACAAAAGAA TATGCC TAT CAATGAGTGACTTTCAT CCGGAA TCTT GGAATCCTATG TGGTCTGTGGCAAG CATTCTCACGGGCCTCCTTT CATT CATGATGGATGATGCTCTGACAACTGGAAGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTTAGCAAAGGCTTCCCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CK085115             [                                      CGGCGGCCGCCGATCCCGATCCCCCCCACCGCCGCCGCCGCCCGATCCGACCAAATCCCCACTACGCGTCCCAATTCCGGGCCAATTCGACCCCCCGAGCGACCGCCATCTACTCACCTCCCGATCGATTCGGATCCCCAATCTAGCGGGCGCGGGGCGGGGCGGGGAGGCGGGATTGGGCTAGGGTTTTGTGGGGGATTGGTGTATTGGATTAGGTGATGGCGGAGAAGGGATGCCTCAAGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATTGGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTACGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAACTCC TAGCGG AAGG TTTGCCCCTCACAAAAGAA TATGCC TAT CAATGAGTGACTTTCAT CCGGAA TCTT GGAATCCTATG TGGTCTGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU082746             [                                                                                                                                                                                                                CGGGATTGGGCTAGGGTTTTGTGGGGGATTGGTGTATTGGATTAGGTGATGGCGGAGAAGGGATGCCTCAAGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATTGGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTACGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAACTCC TAGCGG AAGG TTTGCCCCTCACAAAAGAA TATGCC TAT CAATGAGTGACTTTCAT CCGGAA TCTT GGAATCCTATG TGGTCTGTGGCAAG CATTCTCACGGGCCTCCTTT CATT CATGATGGATGATGCTCTGACAACTGGAAGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTTAGCAAAGGCTTCCCTTGCCTACAACTGTGAGAGCAAAAATTGCCCTCACTTCAGGAAAATGTTTCCAGAGTACGTCGAGAAATA CAACCAACAGAAACAGATGGAGCAAACCGTAACGGAACCAGAAACTCAAGAGAANCCTGCCCCAGCTCCAT CTCCTGCGGTCCAACAACAGGCTGCAGTAGTAGCCAAT AAGGC GAAANCTGCGGCGGAAGCC CAGNGAAGCAAGAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BE230283             [                                                                                                                                                                                                                                                                                   TCAAGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATTGGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTACGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAACTCC TAGCGG AAGG TTTGCCCCTCACAAAAGAA TATGCC TAT CAATGAGTGACTTTCAT CCGGAA TCTT GGAATCCTATG TGGTCTGTGGCAAG CATTCTCACGGGCCTCCTTT CATT CATGATGGATGATGCTCTGACAACTGGAAGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTTAGCAAAGGCTT CCTTG CTACAACTGTGAGAGCAAAAATTG CCTCACTTCAGGAAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK062230             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAACTCC TAGCGG AAGG TTTGCCCCTCACAAAAGAA TATGCC TAT CAATGAGTGACTTTCAT CCGGAA TCTT GGAATCCTATG TGGTCTGTGGCAAG CATTCTCACGGGCCTCCTTT CATT CATGATGGATGATGCTCTGACAACTGGAAGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTTAGCAAAGGCTTCCCTTGCCTACAACTGTGAGAGCAAAAATTGCCCTCACTTCAGGAAAATGTTTCCAGAGTACGTCGAGAAATA CAACCAACAGAAACAGATGGAGCAAACCGTAGCGGAACCAGAAACTCAAGAGAACCCTGCCCCAGCTCCAT CTCCTGCGGTCCAACAACAGGCTGCAGTAGTAGCCAAT AAGGC GAAACCTGCGGCGGAGGCCGCAGGCGAGC AGAAGCAGAAGAAGCGAGTGCCCTTCTGGATGATGCTGGTTATGTTTTCTGTTTTTGGTGCGGTGATGGCCTTGCCCCTGATGCAACTCTGACAAATAAAATAAAAAGAGGCTATAAAAGTGTGATACCGGGGGGTAATTTTTGTATAGTTTTCCCAAGGTTTGCGTAACTCGATTCTTCTGTGGACTCTCTTCACTTTGGTGATGGTAAAATCTGTAGAACCATATCCTCTCTT                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU057750             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACTCCTTAGCGGAAAGGTTTTCCCCCTCACAAAAGAATTTTGCCTTATCCAATGAGTGACTTTCATCCCGGAATTCTTGGGAACCCTATGTTGGTCTGTGGCNAGNCTTTCTCACGGCCCTCCTTTCCATTCCATGATGGATGATGCTCTGACAACTGGANGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTTAGCAAAGGCTTCCCTTGCCTACAACTGTGAGAGCAAAAATTGCCCTCACTTCAGGAAAATGTTTCCAGAGTACGTCGAGAAATACCAACCAACAGAAACAGATGGANCAAACCGTAGCGGAACCAGAAACTCAAGAGAACCCTGCCCCAGCTCCAT CTCCTGCGGTCCAACAACAGGCTGCAGTAGTAGCCAAT AAGGC GAAACCTGCGGCGGAGGCCGCAGGCGAGC AGAAGCAGAAGAAGCGAGTGCCCTTCTGGATGATGCTGGTTATGTTTTCTGTTTTTGGTGCGGTGATGGCCTTGCCCCTGATGCAACTCTGACAAATAAAATAAAAAGAGGCTATAAAAGTGTGATACCGGGGGGTAATTTTTGTATAGTTTTCCCAAGGTTTGCGTAACTCGATTCTTCTGTGGACTCTCTTCACTTTGGTGATGGTAAAATCTGTAGAACCATATCCTCTCTTTACAGAATCTACAGAACAGCTTTGTTTGA  AAAAAAA                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB671529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAAATA CTACCAACAGAAACAGATGGAGCAAACCGTAGCGGAACCAGAAACTCAAGAGAACCCTGCCCCAGCTCCAT CTCCTGCGGTCCAACAACAGGCTGCAGTAGTAGCCAAT AAGGC GAAACCTGCGGCGGAGGCCGCAGGCGAGC AGAAGCAGAAGAAGCGAGTGCCCTTCTGGATGATGCTGGTTATGTTTTCTGTTTTTGGTGCGGTGATGGCCTTGCCCCTGATGCAACTCTGACAAATAAAATAAAAAGAGGCTATAAAAGTGTGATACCGGGGGGTAATTTTTGTATAGTTTTCCCAAGGTTTGCGTAACTCGATTCTTCTGTGGACTCTCTTCACTTTGGTGATGGTAAAATCTGTAGAACCATATCCTCTCTTTACAGAATCTACAGAACAGCTTTGTTTGAGTAAAAAAAAAAAAAAAAAAACTCGCCGTGATGCAGGTGGTGGTTTGGGTGGCGGCGCCGGCGATGATACGGGCGGGGTCGACGACGGCGGTGATGACGGTGATGCTGGTGGCGTTCATGTTGGAGTACCTGCCAAAGATCTACCACTCCGTCGTCTTCCTCCGCCGGATGCAGAACCAGTCCGGCCACATCTTCGGCACCATCTGGTGGGGCATCGCCCTCAACCTCATAGCCTACTTCGTCGCCGCTCACGCGGTGGGCGCGTGCTGGTACTTGCTGGGGGTCCAGAGGGCCACCAAGTGCCTGAAGGAGCAGTGCTTGCTTGCCGGGCTGCCGGCGTGCG]
[+] EMBL C96808               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGCCCCAGCTCCATNCT CTGCGGTCCAACAACAGGCTGCAGTAGTAGCCAATAAAGGCTGANANAT C GCGGAGGCC CAGGCGAGC AGAAGCAGAAGAAGCGAGTGCCCTTCTGGATGATGCTGGTTATGTTTTCTGTTTTTGGTGCGGTGAT GCCTTGCCCCTGATGCAACTCTGACAAATAAAATAAAAAGAGGCTATAAAAGTGTGATACCGGGGGGTAATTTTTGTATAGTTTTCCCAAGGTTTGCGTAACTCGATTCTTCTGTGGACTCTCTTCACTTTGGTGATGGTAAAATCTGTAGAACCATATCCTCTCTTTACAGAATCTACAGAACAGCTTTGTTTGA  AAAA                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI809930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAAGTGTGATACCGGGGGGTAATTTTTGTATAGTTTTCCCAAGGTTTGCGTAACTCGATTCTTCTGTGGACTCTCTTCACTTTGGTGATGGTAAAATCTGTAGAACCATATCCTCTCTTTACAGAATCTACAGAACAGCTTTGTTTGA  AAAA                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_13634#0
TCTCTTCTCTCTTTTTCTCCCCTCTCCCCGGGGAAACGCGGCGGCCGCCGATCCCGATCC
CCCCCACCGCCGCCGCCGCCCGATCCGACCAAATCCCCACTACGCGTCCCAATTCCGGGC
CAATTCGACCCCCCGAGCGACCGCCATCTACTCACCTCCCGATCGATTCGGATCCCCAAT
CTAGCGGGCGCGGGGCGGGGCGGGGAGGCGGGATTGGGCTAGGGTTTTGTGGGGGATTGG
TGTATTGGATTAGGTGATGGCGGAGAAGGGATGCCTCAAGCGCCTCCAGAAGGAGTACCA
CTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATT
GGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTA
CGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAAC
TCCTAGCGGAAGGTTTGCCCCTCACAAAAGAATATGCCTATCAATGAGTGACTTTCATCC
GGAATCTTGGAATCCTATGTGGTCTGTGGCAAGCATTCTCACGGGCCTCCTTTCATTCAT
GATGGATGATGCTCTGACAACTGGAAGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTT
AGCAAAGGCTTCCCTTGCCTACAACTGTGAGAGCAAAAATTGCCCTCACTTCAGGAAAAT
GTTTCCAGAGTACGTCGAGAAATACAACCAACAGAAACAGATGGAGCAAACCGTAGCGGA
ACCAGAAACTCAAGAGAACCCTGCCCCAGCTCCATCTCCTGCGGTCCAACAACAGGCTGC
AGTAGTAGCCAATAAGGCGAAACCTGCGGCGGAGGCCGCAGGCGAGCAGAAGCAGAAGAA
GCGAGTGCCCTTCTGGATGATGCTGGTTATGTTTTCTGTTTTTGGTGCGGTGATGGCCTT
GCCCCTGATGCAACTCTGACAAATAAAATAAAAAGAGGCTATAAAAGTGTGATACCGGGG
GGTAATTTTTGTATAGTTTTCCCAAGGTTTGCGTAACTCGATTCTTCTGTGGACTCTCTT
CACTTTGGTGATGGTAAAATCTGTAGAACCATATCCTCTCTTTACAGAATCTACAGAACA
GCTTTGTTTGAAAAAAAAAAAAAAAAAAAACTCGCCGTGATGCAGGTGGTGGTTTGGGTG
GCGGCGCCGGCGATGATACGGGCGGGGTCGACGACGGCGGTGATGACGGTGATGCTGGTG
GCGTTCATGTTGGAGTACCTGCCAAAGATCTACCACTCCGTCGTCTTCCTCCGCCGGATG
CAGAACCAGTCCGGCCACATCTTCGGCACCATCTGGTGGGGCATCGCCCTCAACCTCATA
GCCTACTTCGTCGCCGCTCACGCGGTGGGCGCGTGCTGGTACTTGCTGGGGGTCCAGAGG
GCCACCAAGTGCCTGAAGGAGCAGTGCTTGCTTGCCGGGCTGCCGGCGTGCG

consensusID : consensus_13634#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 880
fasta sequence

                              [AGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATTGGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTACGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAACTCCTAGCGGAAGGTTTGCCCCTCACAAAAGAATATGCCTATCAATGAGTGACTTTCATCCGGAATCTTGGAATCCTATGTGGTCTGTGGCAAGGTATGTACAAATCTGTACTAAGCACAATATTTGAGCATAACGTATTTCCCACCATTATCTGGGGAGTTGTTGGGCTGAGTCGTCATTCAAACTTAAGAGATATCTAGACCAGTTTACATCTTTCCATTCTTGTAAAGAACATGAAGTCATGCTTGTGTGGTTCCTTGGGAGTCGATGTAGGTGAACAATAATGGCATATTTTCTAAGCATGAAACTTATTATGATAGCATAGATCCAATTAATCCTTCTATTTAATAGTGAGATGTGTGGACTCTAAATCATCAAAATGTAGTTCCACTGCTCTAGTGATATATGTAGTCTGTAGTTTTACTATATAAATCTTTTCTACCTATCTCTCTTCATAGTCTGACATATACTTTCGTTCTGCAGCATTCTCACGGGCCTCCTTTCATTCATGGTAAGCTCTTAGTTTTGCATCAGCTCAGAATTAGCAAGAAAGATTCTCATCCTGTTTTAATTGCTAACCCATGTACACNAGATGTTATTCATGCCTATTAATAATATTGGTAATCTTGATCCCCCACCCCCAGCAACACTGTTGCTTTTTCGCTTGCGGAGATGCAG]

[+] EMBL CA755272             [AGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATTGGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTACGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAACTCCTAGCGGAAGGTTTGCCCCTCACAAAAGAATATGCCTATCAATGAGTGACTTTCATCCGGAATCTTGGAATCCTATGTGGTCTGTGGCAAGGTATGTACAAATCTGTACTAAGCACAATATTTGAGCATAACGTATTTCCCACCATTATCTGGGGAGTTGTTGGGCTGAGTCGTCATTCAAACTTAAGAGATATCTAGACCAGTTTACATCTTTCCATTCTTGTAAAGAACATGAAGTCATGCTTGTGTGGTTCCTTGGGAGTCGATGTAGGTGAACAATAATGGCATATTTTCTAAGCATGAAACTTATTATGATAGCATAGATCCAATTAATCCTTCTATTTAATAGTGAGATGTGTGGACTCTAAATCATCAAAATGTAGTTCCACTGCTCTAGTGATATATGTAGTCTGTAGTTTTACTATATAAATCTTTTCTACCTATCTCTCTTCATAGTCTGACATATACTTTCGTTCTGCAGCATTCTCACGGGCCTCCTTTCATTCATGGTAAGCTCTTAGTTTTGCATCAGCTCAGAATTAGCAAGAAAGATTCTCATCCTGTTTTAATTGCTAACCCATGTACACNAGATGTTATTCATGCCTATTAATAATATTGGTAATCTTGATCCCCCACCCCCAGCAACACTGTTGCTTTTTCGCTTGCGGAGATGCAG]




>consensus_13634#1
AGCGCCTCCAGAAGGAGTACCACTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTC
GCCCGCTGCCCAACGACATATTGGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACAC
CATTTGAAGGTGGATATTATTACGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGC
CTCCAAGCATCAGCATGACAACTCCTAGCGGAAGGTTTGCCCCTCACAAAAGAATATGCC
TATCAATGAGTGACTTTCATCCGGAATCTTGGAATCCTATGTGGTCTGTGGCAAGGTATG
TACAAATCTGTACTAAGCACAATATTTGAGCATAACGTATTTCCCACCATTATCTGGGGA
GTTGTTGGGCTGAGTCGTCATTCAAACTTAAGAGATATCTAGACCAGTTTACATCTTTCC
ATTCTTGTAAAGAACATGAAGTCATGCTTGTGTGGTTCCTTGGGAGTCGATGTAGGTGAA
CAATAATGGCATATTTTCTAAGCATGAAACTTATTATGATAGCATAGATCCAATTAATCC
TTCTATTTAATAGTGAGATGTGTGGACTCTAAATCATCAAAATGTAGTTCCACTGCTCTA
GTGATATATGTAGTCTGTAGTTTTACTATATAAATCTTTTCTACCTATCTCTCTTCATAG
TCTGACATATACTTTCGTTCTGCAGCATTCTCACGGGCCTCCTTTCATTCATGGTAAGCT
CTTAGTTTTGCATCAGCTCAGAATTAGCAAGAAAGATTCTCATCCTGTTTTAATTGCTAA
CCCATGTACACNAGATGTTATTCATGCCTATTAATAATATTGGTAATCTTGATCCCCCAC
CCCCAGCAACACTGTTGCTTTTTCGCTTGCGGAGATGCAG

consensusID : consensus_13634#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 181
fasta sequence

                              [CCTACAACTGTGAGAGCAAAAATTGCCCTCACTTCAGGAAAATGTTTCCAGAGTACGTGAGAAATACAACCAACAGAAACAGATGGAGCAAACCGTAGCGGAACCAGAGCTCAAGANAACCTGCAACAGCTCTATCTGCGTCACACAGCTGCATAGTAGCATAAGGAACTCGCGACAGCGA]

[+] EMBL AA751092             [CCTACAACTGTGAGAGCAAAAATTGCCCTCACTTCAGGAAAATGTTTCCAGAGTACGTGAGAAATACAACCAACAGAAACAGATGGAGCAAACCGTAGCGGAACCAGAGCTCAAGANAACCTGCAACAGCTCTATCTGCGTCACACAGCTGCATAGTAGCATAAGGAACTCGCGACAGCGA]




>consensus_13634#2
CCTACAACTGTGAGAGCAAAAATTGCCCTCACTTCAGGAAAATGTTTCCAGAGTACGTGA
GAAATACAACCAACAGAAACAGATGGAGCAAACCGTAGCGGAACCAGAGCTCAAGANAAC
CTGCAACAGCTCTATCTGCGTCACACAGCTGCATAGTAGCATAAGGAACTCGCGACAGCG
A

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13634#0      TCTCTTCTCTCTTTTTCTCCCCTCTCCCCGGGGAAACGCGGCGGCCGCCGATCCCGATCC 60
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      ------------------------------------------------------------
                                                                                   

consensus_13634#0      CCCCCACCGCCGCCGCCGCCCGATCCGACCAAATCCCCACTACGCGTCCCAATTCCGGGC 120
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      ------------------------------------------------------------
                                                                                   

consensus_13634#0      CAATTCGACCCCCCGAGCGACCGCCATCTACTCACCTCCCGATCGATTCGGATCCCCAAT 180
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      ------------------------------------------------------------
                                                                                   

consensus_13634#0      CTAGCGGGCGCGGGGCGGGGCGGGGAGGCGGGATTGGGCTAGGGTTTTGTGGGGGATTGG 240
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      ------------------------------------------------------------
                                                                                   

consensus_13634#0      TGTATTGGATTAGGTGATGGCGGAGAAGGGATGCCTCAAGCGCCTCCAGAAGGAGTACCA 300
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      --------------------------------------AGCGCCTCCAGAAGGAGTACCA 22
                                                                                   

consensus_13634#0      CTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATT 360
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      CTCGCTCTGCAAGGAGCCGCCGCCGCAGATCGTGGCTCGCCCGCTGCCCAACGACATATT 82
                                                                                   

consensus_13634#0      GGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTA 420
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      GGAGTGGCATTTTGTACTTGAAGGTAGTGCTGGCACACCATTTGAAGGTGGATATTATTA 142
                                                                                   

consensus_13634#0      CGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAAC 480
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      CGGGAAACTCAAATTTCCACCTGATTACCCTTTTAAGCCTCCAAGCATCAGCATGACAAC 202
                                                                                   

consensus_13634#0      TCCTAGCGGAAGGTTTGCCCCTCACAAAAGAATATGCCTATCAATGAGTGACTTTCATCC 540
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      TCCTAGCGGAAGGTTTGCCCCTCACAAAAGAATATGCCTATCAATGAGTGACTTTCATCC 262
                                                                                   

consensus_13634#0      GGAATCTTGGAATCCTATGTGGTCTGTGGCAAGCATTCTCACGGGCCTCCTTTCATTCAT 600
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      GGAATCTTGGAATCCTATGTGGTCTGTGGCAAGGTATGTACAAATCTG--TACTAAGCAC 320
                                                                                   

consensus_13634#0      GATGGATGATGCTCTGACAACTGGAAGCATCAGGAGTACAGAGGGGGAAAAGAGACGTTT 660
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      AATATTTGAGCATAACGTATTTCCCACCATTATCTGGGGAGTTGTTGGGCTGAGTCGTCA 380
                                                                                   

consensus_13634#0      AGCAAAGGCTTCCCTTGCCTACAACTGTGAGAG-----CAAAAATTGCCCTCACTTCAGG 715
consensus_13634#2      -----------------CCTACAACTGTGAGAG-----CAAAAATTGCCCTCACTTCAGG 38
consensus_13634#1      TTCAAACTTAAGAGATATCTAGACCAGTTTACATCTTTCCATTCTTGTAAAGAACATGAA 440
                                         *** * * **          * *   ***     *       

consensus_13634#0      AAAATGTTTCCAGAGTACGTCGAGAAATACAACCAACAGAAACAGATGGAGCAAACCGTA 775
consensus_13634#2      AAAATGTTTCCAGAGTACGT-GAGAAATACAACCAACAGAAACAGATGGAGCAAACCGTA 97
consensus_13634#1      GTCATGCTTGTGTGGTTCCTTGGGAG--TCGATGTAGGTGAACAATAATGGCATATTTTC 498
                          *** **     ** * * * **    * *   *    ****      *** *   * 

consensus_13634#0      GCGGAACCAGAAAC-TCAAGAGAACCCTGCCCCAGCTCCATCTCCTGCGGTCCAACAACA 834
consensus_13634#2      GCGGAACCAGAG-C-TCAAGANAACC-TGCAACAGCTCTATCTGC----GTCACACA--- 147
consensus_13634#1      TAAGCATGAAACTTATTATGATAGCATAGATCCAATTAATCCTTCT---ATTTAATAGTG 555
                          * *  * *    * * ** * *   *   **  *    ** *     *   * *   

consensus_13634#0      GGCTGCAGTAGTAGCCAATAAGGCGAAACCTGCGGCGGAGGCCGCAGGCGAGCAGAAGCA 894
consensus_13634#2      -GCTGCA-TAGTAGC--ATAAGG---AACTCGCGACAGCGA------------------- 181
consensus_13634#1      AGATGTGTGGACTCTAAATCATCAAAATGTAGTTCCACTGCTCTAGTGATATATGTAGTC 615
                        * **            ** *     *    *   *   *                    

consensus_13634#0      GAAGAAGCGAGTGCCCTTCTGGATGATGCTGGTTATGTTTTCTGTTTTTGGTGCGGTGAT 954
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      TGTAGTTTTACTATATAAATCTTTTCTACCTATCTCTCTTCATAGTCTGACATATACTTT 675
                                                                                   

consensus_13634#0      GGCCTTGCCCCTGATGCAACTCTGACAAATAAAATAAAAAGAGGCTATAAAAGTGTGATA 1014
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      CGTTCTGCAGCATTCTCACGGGCCTCCTTTCATTCATGGTAAGCTCTTAGTTTTGCATCA 735
                                                                                   

consensus_13634#0      CCGGGGGGTAATTTTTGTATAGTTTTCCCAAGGTTTGCGTAACTCGATTCTTCTGTGGAC 1074
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      GCTCAGAATTAGCAAGAAAGATTCTCATCCTGTTTTAATTG--CTAACCCATGTACACNA 793
                                                                                   

consensus_13634#0      TCTCTTCACTTTGGTGATGGTAAAATCTGTAGAACCATATCCTCTCTTTACAGAATCTAC 1134
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      GATGTTATTCATGCCTATTAATAATATTGGTAATCTTGATCCCCCACCCCCAGCAACACT 853
                                                                                   

consensus_13634#0      AGAACAGCTTTGTTTGAAAAAAAAAAAAAAAAAAAACTCGCCGTGATGCAGGTGGTGGTT 1194
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      GTTGCTTTTTCGCTTGCGGAGATGCAG--------------------------------- 880
                                                                                   

consensus_13634#0      TGGGTGGCGGCGCCGGCGATGATACGGGCGGGGTCGACGACGGCGGTGATGACGGTGATG 1254
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      ------------------------------------------------------------
                                                                                   

consensus_13634#0      CTGGTGGCGTTCATGTTGGAGTACCTGCCAAAGATCTACCACTCCGTCGTCTTCCTCCGC 1314
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      ------------------------------------------------------------
                                                                                   

consensus_13634#0      CGGATGCAGAACCAGTCCGGCCACATCTTCGGCACCATCTGGTGGGGCATCGCCCTCAAC 1374
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      ------------------------------------------------------------
                                                                                   

consensus_13634#0      CTCATAGCCTACTTCGTCGCCGCTCACGCGGTGGGCGCGTGCTGGTACTTGCTGGGGGTC 1434
consensus_13634#2      ------------------------------------------------------------
consensus_13634#1      ------------------------------------------------------------
                                                                                   

consensus_13634#0      CAGAGGGCCACCAAGTGCCTGAAGGAGCAGTGCTTGCTTGCCGGGCTGCCGGCGTGCG 1492
consensus_13634#2      ----------------------------------------------------------
consensus_13634#1      ----------------------------------------------------------