These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13640#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 3081 fasta sequence [GTACTACTACACTCCTAATCTCTCTCTCTTTCTCGAGTGGAATCCATTGATCCATTGTGTAGTGGGAGANAGACTTCTCTACGCGGTCACGGGTTCCCCAGCGGAGGAGAAAGATAGATAGAGAGAGCAAAGAGCAAAAAAATCTCTCTTTTTTCTTCTTGTTGTTTCTGCAGTTACCTTTGTCTTGCCTTCAATGCCACCGCTTTACTGCCGGATCTGAGGAAAGCTCCCATCCTTGCTGAGTTCTTGTGCTGCTTCTTCCACAATTCTTCCTTTTGTTGAGAATTTTGCCTTCCATCTGCTTAATCGGTGACAAAGGTGGTGGGATCTTGCTTCTCTTCCTGCAAGAAAAGGCTCGTTTTTTT-GTTTCGCCGTTTGCTGCTTGCTCAGGCAGGAGGAAGGCGATGCTGTTCTTGCTGATTTC-AGTCTTCTTCTTCC-GATGGTCGAGGTGAGGTTTGTTGCTACTTCACCTTTCGCTTCGTTGCGCTCTGCGGAGAGAAAGAAAGCAAAGGTGGTGGAAAAGAAGCGAAAATTTTGCTTGCTTCCTCTGCAAATCTGAGGAATTTTCTCGCAGAAAGCCTGAATTCCCTCTGAATTCCGGTGCATGGAAAGATCGTCCCCTCCATTTCCAAGAAGAAGAAGATACTAGTAGCAGCTGCAGCTACACTCTAGTAGTAGTGGCTACTAGTACTAGCTAGCCTCCAATGGCGTCCTCACCGTCTCCCTCCCCGGGCACCGCAACTCCCGCCACCGCCGCCGCCGCGCCTTCCACCGCGACCCCAACACCCGCGACGCAGCCCAATGCCACGCCGGCCGACCCCTCCATCACTCCCCCGGCCGCGTCCCCTCCCCTTCCCTCCGCCGCCACGCCACCCCCACAGCCCGATTCCCCGCCGCCCTCTCCGCCACCAGCTCCTCCGGTCGCAGTGCCACCGCCGGCCACCGTGCCACCGCCGCCTGTACCCGTTGCGTCTCCACCACCAACCCCGTCAGCCACATTGCCGCCGCCGTCGCCACCGGCTTCAGTGCCGGTGCCACCTACACCTGCTACTACCCCTCCAAAGCCGTCGCCTGTGCAGCAACCCCCAGTGGCTGCATCACCACCTCCATCGTCTCCGGCTGATTTGCCGCCGCCTAATCCGCCGGCTCGCTCAGACACGCCGCCGGTAGTGCAGTCACCTCCACCGCCGCACCGGAGATCGCCGAGAACGCCATGGGCTCCACCGATGGCGCCGTCGCCTTCTGGAAGTCCTACCAAGCCTTCTCCAGCTAGTCCATCACCAATTGCTGGAGATCCAATCATCCCTACACCCAATAACCCTTCGTCGCCTCTGGCGACGCCATCAGCACCAGGCTCTGGTACTCCTGTGGTGACGCCATCTGCACCAGTCTCTGGCCCTCCATCGCCAGGCACGGCTCCAGCCACGGCAGCTGATCGATCCAACAAGTCATTAAGTCCCAACACGCAGGACGGCAGCGTCTCGTCGAGCGATGGTGGAATGAGCTCAAGTGCAAAGGCGGGCATCGGTGTAGTCGTCGCTATTCTTGTGCTTAGCTTGGTAGGAGCTGCATTTTGGTACAAGAAGAAACGGAGGAGAGCAACCGGTTACCATGCAGGATTTGTGATGCCATCGCCTGCCTCGTCTCCACAAGTGTTAGGGTATTCAGGTAAAACTAACTACAGTGCTGGCAGTCCTGATTACAAAGAAACAATGTCGGAGTTCAGCATGGGCAATTGTCGATTCTTCACTTACGAGGAATTGCACCAGATCACAAATGGTTTTGCAGCGAAGAACCTGCTAGGGGAAGGTGGGTTTGGGTCTGTTTACAAGGGTTGCTTGGCTGATGGAAGAGAGGTTGCCGTTAAGAAACTGAAAGGTGGTGGTGGGCAGGGGGAACGTGAGTTCCAGGCTGAGGTGGAGATAATCAGTCGTGTGCACCACCGCCATCTAGTTTCTCTTGTTGGGTATTGCATTTCGGGGGACCAGAGGTTGCTTGTCTATGATTTTGTGCCCAATGACACACTGCACCATCATCTTCATGGACGTGGAATGCCGGTTTTGGAGTGGTCAGCTAGGGTTAAAATTGCAGCTGGCTCAGCTCGAGGGATAGCATATCTTCATGAAGATTGCCATCCCCGAATTATCCACCGAGATATTAAATCCTCCAACATTTTACT-GGATAATAACTTTGAAGCCCAGGTTGCTGATTTTGGCCTTGCAAGACTAGCTATGGATGCAGTCACGCATGTAACTACACGGGTGATGGGAACTTTTGGTTATCTGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAGATCTGATGTATTCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGTTGACGCATCAAAACCATTGGGTGATGAGAGCCTTGTTGAGTGGGCTAGGCCATTGCTCACAGAAGCAATTGAGACTGGCAACGTTGGGGAGCTGATTGACTCCAGGCTGGACAAGAACTTCAATGAAGCTGAAATGTTTCGAATGATCGAAGCTGCGGCAGCTTGCATTCGACATTCAGCATCTAGGAGACCCCGGATGAGCCAGGTGGTGCGTGTTCTTGATAGCTTAGCTGACGTCGATCTAAGCAATGGTATTCAGCCTGGTAAGAGCGAAATGTTCAAT-G-TGGC--AAAC-AC---GGCA-GAAATCAGGCT-GTTTCAGCGGATGG-CTTTTGGTAGCCAAGA-TTTCACAACTGATTTCACCCAATCTAGCTGGGATAGTCGTAGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAATCATAGTCTAATACTCCTCTAATTAGCTAGGGTATTGTTGCATTGGATTTGTTTCATCTGATTTTGTTTTCTTCTTTTTTGTGGCCATCTCTGTCAACTAGGAGTAATGTATAT-CATGCGTCCCACTAAGAAAAGTGTATATTGATTGCACTGAGC-GTGCCTGATTCTACAAAATCTGACAGACAGAAGATTTACTAGTACTAGCCCTTGAAGGAACCAATGAATTGCCTCTGTTGGTGGTGACTGAACCTGCATATTCCACTCTATATTTCCTCAAAAA] [+] EMBL AK101096 [GTACTACTACACTCCTAATCTCTCTCTCTTTCTCGAGTGGAATCCATTGATCCATTGTGTAGTGGGAGAGAGACTTCTCTACGCGGTCACGGGTTCCCCAGCGGAGGAGAAAGATAGATAGAGAGAGCAAAGAGCAAAAAAATCTCTCTTTTTTCTTCTTGTTGTTTCTGCAGTTACCTTTGTCTTGCCTTCAATGCCACCGCTTTACTGCCGGATCTGAGGAAAGCTCCCATCCTTGCTGAGTTCTTGTGCTGCTTCTTCCACAATTCTTCCTTTTGTTGAGAATTTTGCCTTCCATCTGCTTAATCGGTGACAAAGGTGGTGGGATCTTGCTTCTCTTCCTGCAAGAAAAGGCTCGTTTTTTT GTTTCGCCGTTTGCTGCTTGCTCAGGCAGGAGGAAGGCGATGCTGTTCTTGCTGATTTC AGTCTTCTTCTTCC GATGGTCGAGGTGAGGTTTGTTGCTACTTCACCTTTCGCTTCGTTGCGCTCTGCGGAGAGAAAGAAAGCAAAGGTGGTGGAAAAGAAGCGAAAATTTTGCTTGCTTCCTCTGCAAATCTGAGGAATTTTCTCGCAGAAAGCCTGAATTCCCTCTGAATTCCGGTGCATGGAAAGATCGTCCCCTCCATTTCCAAGAAGAAGAAGATACTAGTAGCAGCTGCAGCTACACTCTAGTAGTAGTGGCTACTAGTACTAGCTAGCCTCCAATGGCGTCCTCACCGTCTCCCTCCCCGGGCACCGCAACTCCCGCCACCGCCGCCGCCGCGCCTTCCACCGCGACCCCAACACCCGCGACGCAGCCCAATGCCACGCCGGCCGACCCCTCCATCACTCCCCCGGCCGCGTCCCCTCCCCTTCCCTCCGCCGCCACGCCACCCCCACAGCCCGATTCCCCGCCGCCCTCTCCGCCACCAGCTCCTCCGGTCGCAGTGCCACCGCCGGCCACCGTGCCACCGCCGCCTGTACCCGTTGCGTCTCCACCACCAACCCCGTCAGCCACATTGCCGCCGCCGTCGCCACCGGCTTCAGTGCCGGTGCCACCTACACCTGCTACTACCCCTCCAAAGCCGTCGCCTGTGCAGCAACCCCCAGTGGCTGCATCACCACCTCCATCGTCTCCGGCTGATTTGCCGCCGCCTAATCCGCCGGCTCGCTCAGACACGCCGCCGGTAGTGCAGTCACCTCCACCGCCGCACCGGAGATCGCCGAGAACGCCATGGGCTCCACCGATGGCGCCGTCGCCTTCTGGAAGTCCTACCAAGCCTTCTCCAGCTAGTCCATCACCAATTGCTGGAGATCCAATCATCCCTACACCCAATAACCCTTCGTCGCCTCTGGCGACGCCATCAGCACCAGGCTCTGGTACTCCTGTGGTGACGCCATCTGCACCAGTCTCTGGCCCTCCATCGCCAGGCACGGCTCCAGCCACGGCAGCTGATCGATCCAACAAGTCATTAAGTCCCAACACGCAGGACGGCAGCGTCTCGTCGAGCGATGGTGGAATGAGCTCAAGTGCAAAGGCGGGCATCGGTGTAGTCGTCGCTATTCTTGTGCTTAGCTTGGTAGGAGCTGCATTTTGGTACAAGAAGAAACGGAGGAGAGCAACCGGTTACCATGCAGGATTTGTGATGCCATCGCCTGCCTCGTCTCCACAAGTGTTAGGGTATTCAGGTAAAACTAACTACAGTGCTGGCAGTCCTGATTACAAAGAAACAATGTCGGAGTTCAGCATGGGCAATTGTCGATTCTTCACTTACGAGGAATTGCACCAGATCACAAATGGTTTTGCAGCGAAGAACCTGCTAGGGGAAGGTGGGTTTGGGTCTGTTTACAAGGGTTGCTTGGCTGATGGAAGAGAGGTTGCCGTTAAGAAACTGAAAGGTGGTGGTGGGCAGGGGGAACGTGAGTTCCAGGCTGAGGTGGAGATAATCAGTCGTGTGCACCACCGCCATCTAGTTTCTCTTGTTGGGTATTGCATTTCGGGGGACCAGAGGTTGCTTGTCTATGATTTTGTGCCCAATGACACACTGCACCATCATCTTCATGGACGTGGAATGCCGGTTTTGGAGTGGTCAGCTAGGGTTAAAATTGCAGCTGGCTCAGCTCGAGGGATAGCATATCTTCATGAAGATTGCCATCCCCGAATTATCCACCGAGATATTAAATCCTCCAACATTTTACT GGATAATAACTTTGAAGCCCAGGTTGCTGATTTTGGCCTTGCAAGACTAGCTATGGATGCAGTCACGCATGTAACTACACGGGTGATGGGAACTTTTGGTTATCTGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAGATCTGATGTATTCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGTTGACGCATCAAAACCATTGGGTGATGAGAGCCTTGTTGAGTGGGCTAGGCCATTGCTCACAGAAGCAATTGAGACTGGCAACGTTGGGGAGCTGATTGACTCCAGGCTGGACAAGAACTTCAATGAAGCTGAAATGTTTCGAATGATCGAAGCTGCGGCAGCTTGCATTCGACATTCAGCATCTAGGAGACCCCGGATGAGCCAGGTGGTGCGTGTTCTTGATAGCTTAGCTGACGTCGATCTAAGCAATGGTATTCAGCCTGGTAAGAGCGAAATGTTCAAT G TGGC AAAC AC GGCA GAAATCAGGCT GTTTCAGCGGATGG CTTTTGGTAGCCAAGA TTTCACAACTGATTTCACCCAATCTAGCTGGGATAGTCGTAGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAATCATAGTCTAATACTCCTCTAATTAGCTAGGGTATTGTTGCATTGGATTTGTTTCATCTGATTTTGTTTTCTTCTTTTTTGTGGCCATCTCTGTCAACTAGGAGTAATGTATAT CATGCGTCCCACTAAGAAAAGTGTATATTGATTGCACTGAGC GTGCCTGATTCTACAAAATCTGACAGACAGAAGATTTACTAGTACTAGCCCTTGAAGGAACCAATGAATTGCCTCTGTTGGTGGTGACTGAACCTGCATATTCCACTCT ] [+] EMBL OSS2833A [ CCATTGATCCATTGTGTAGTGGGAGANAGACTTCTCTACGCGGTCACGGGTTCCCCAGCGGAGGAGAAAGATAGATAGAGAGAGCAAAGAGCAAAAAAATCTCTCTTTTTTCTTCTTGTTGTTTCTGCAGTTACCTTTGTCTTGCCTTCAATGCCACCGCTTTACTGCCGGATCTGAGGAAAGCTCCCATCCTTGCTGAGTTCTTGTGCTGCTTCTTCCACAATTCTTCCTTTTGTTGAGAATTTTGCCTTCCATCTGCTTAATCGGTGACAAAGGTGGTGGGATCTTGCTTCTCTTCCTGCAAGAA ] [+] EMBL OSS2834A [ CCATTGATCCATTGTGTAGTGGGAGANAGACTTCTCTACGCGGTCACGGGTTCCCCAGCGGAGGAGAAAGATAGATAGAGAGAGCAAAGAGCAAAAAAATCTCTCTTTTTTCTTCTTGTTGTTTCTGCAGTTACCTTTGTCTTGCCTTCAATGCCACCGCTTTACTGCCGGATCTGAGGAAAGCTCCCATCCTTGCTGAGTTCTTGTGCTGCTTCTTCCACAATTCTTCCTTTTGTTGAGAATTTTGCCTTCCATCTGCTTAATCGGTGACAAAGGTGGTGGGATCTTGCTTCTCTTCCTGCAAGAAAAG ] [+] EMBL C74454 [ TTCTCTACGCGGTCACGGGTTCCCCAGCGGAGGAGAAAGATAGATAGAGAGAGCCAAGAGCAAAAAAATCTCTCTTTTTTCTTCTTGTTGTTTCTGCAGTNACCTTTGTCTTGCCTTCAATGCCACCGCTTTACTGCCGGATCTGAGGAAAGCTCCCATCCTTGCTGAGTTCTTGTGCTGCTTCTTCCACAATTCTTCCTTTTGTTGAGAATNTTGCCTTCCATCTGCTTAATCGGTGACAAAGGTGGTGGGATCTTGCTTCTCTTCCTGCAAGAAAANGCTCGTTTTTTTGGTTTCGCCGTTTGCTGCTTGCNCAGGCAGGAGGAANGCGATGCTGTCCTTGCTGAATTCAAGTTTCCTCCTTCCGGNGGGCCAAGGTtaagg ] [+] EMBL CB643837 [ GCTGACCTATACAACAAGTCATTAAGTCCCAACACGCAGGACGGCAGCGTCTCGTCGAGCGATGGTGGAATGAGCTCCCCTGCAAAGGCGGGCATCGGTGTAGTCGTCGCTATTCTTGTGCTTAGCTTGGTAGGAGCTGCATTTTGGTACAAGAAGAAACGGAGGAGAGCAACCGGTTACCATGCAGGATTTGTGATGCCATCGCCTGCCTCGTCTCCACAAGTGTTAGGGTATTCAGGTAAAACTAACTACAGTGCTGGCAGTCCTGATTACAAAGAAACAATGTCAGAGTTCAGCATGGGCAATTGTCGATTCTTCACTTACGAGGAATTGCACCAGATCACAAATGGTTTTGCAGCGAAGAACCTGCTAGGGGAAGGTGGGTTTGGGTCTGTTTACAAGGGTTGCTTGGCTGATGGAAGAGAGGTTGCCGTTAAGAAACTGAAAGGTGGTGGTGGGCAGGGGGAACGTGAGTTCCAGGCTGAGGTGGAGATAATCAGTCGTGTGCACCACCGCCATCTAGTTTCTCTTGTTGGGTATTGCATTTCGGGGGACCAGAGGTTGCTTGTCTATGATTTTGTGCCCAATGACACACTGCACCATCATCTTCATGGACGTGGAATGCCGGTTTTGGAGTGGTCAGCTAGGGTTAAAATTGCAGCTGGCTCAGCTCGAGGGATAGCATATCTTCATGAAGATTGCCATCCCCGAATTATCCACCGAGATATTAAATCCTCCAACATTTTACTGGGAT ATAACTTTGAAGCCCAGGTTGCTGATTTTGGCC TGCAAGACTA ] [+] EMBL CA999255 [ AGCATATCTTCATGAAGATTGCCATCCCCGAATTATCCACCGAGATATTAAATCCTCCAACATTTTACT GGATAATAACTTTGAAGCCCAGGTTGCTGATTTTGGCCTTGCAAGACTAGCTATGGATGCAGTCACGCATGTAACTACACGGGTGATGGGAACTTTTGGTTATCTGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAGATCTGATGTATTCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGTTGACGCATCAAAACCATTGGGTGATGAGAGCCTTGTTGAGTGGGCTAGGCCATTGCTCACAGAAGCAATTGAGACTGGCAACGTTGGGGAGCTGATTGACTCCAGGCTGGACAAGAACTTCAATGAAGCTGAAATGTTTCGAATGATCGAAGCTGCGGCAGCTTGCATTCGACATTCAGCATCTAGGAGACCCCGGATGAGCCAGGTGGTGCGTGTTCTTGATAGCTTAGCTGACGTCGATCTAAGCAATGGTATTCAGCCTGGTAAGAGCG ] [+] EMBL CA998468 [ AGCATATCTTCATGAAGATTGCCATCCCCGAATTATCCACCGAGATATTAAATCCTCCAACATTTTACT GGATAATAACTTTGAAGCCCAGGTTGCTGATTTTGGCCTTGCAAGACTAGCTATGGATGCAGTCACGCATGTAACTACACGGGTGATGGGAACTTTTGGTTATCTGGCTCCGGAGTATG ] [+] EMBL AU183757 [ CAGGTGGTGCGTGTTCTTGATAGCTTAGCTGACGTCGATCTAAGCAATGGTATTCAGCCTGGTAAGAGCGAAATGTTCAAT G TGGC AAAC AC GGCA GAAATCAGGCT GTTTCAGCGGATGG CTTTTGGTAGCCAAGA TTTCACAACTGATTTCACCCAATCTAGCTGGGATAGTCGTAGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAATCATAGTCTAATACTCCTCTAATTAGCTAGGGTATTGTTGCATTGGATTTGTTTCATCTGATTTTGTTTTCTTCTTTTTTGTGGCCATCTCTGTCAACTAGGAGTAATGTATAT CATGCGTCCCACTAAGAAAAGTGTATATTGATTGCACTGAGCGGTGCCTGATTCTACAAAATCTGACAGACAGAAGATTTACTAGTACTAaaaa ] [+] EMBL AU056702 [ AGCCTGGTAAGNGCGAAATGTTCAAT G TGGC AAAC AC GGCA GAAATCAGGCTGGTTTCAGCGGATGG CTTTTGGTAGCCAAGA TTTCACAACTGATTTCACCCAATCTAGCTGGGATAGTCGTNGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAATCATAGTCTAATACTCCTCTAATTAGCTAGGGTATTGTTGCATTGGATTTGTTTCATCTGATTTTGTTTTCTTCTTTTTTGTGGCCATCTCTGTCAACTAGGNGTAATGTATAT CATGCGTCCCACTAAGAAAAGTGTATATTGATTGCACTGAGC GTGCCTGATTCTACAAAATCTGACAGACAGAAGATTTACTNGTACTAGCCCTTGAAGGAACCAATGAATTGCCTCTGTTGGTGGTGACTGAACCTGCATATTCCACTCTATATTTCCTCAAAAA] [+] EMBL AU097209 [ cCAATCGTTGGCCAAAACTACCGTGCCAGGAAATCAGGCT GTTTCAGCGGATGGCCTTTTGGTAGCCAAGATTTTCACAACTGATTTCACCCAATCTAGCTGGGATAGTCGTAGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAATCATAGTCTAATACTCCTCTAATTAGCTAGGGTATTGTTGCATTGGATTTGTTTCATCTGATTTTGTTTTCTTCTTTTTTGTGGCCATCTCTGTCAACTAGGAGTAATGTATAT CATGCGTCCCACTAAGAAAAGTGTATATTGATTCNACTGAGC GTGCCTGATTCTACAAAAa ] [+] EMBL AU097210 [ AATCATAGTCTAATACTCCTCTAATTAGCTAGGGTATTGTTGCATTGGATTTGTTTCATCTGATTTTGTTTTCTTCTTTTTTGTGGCCATCTCTGTCAACTAGGAGTAATGTATATNCATGCGTCCCACTAAGAAAAGTGTATATTGATNTCACTGAGC GTGCCTGATTCTACAAAAaa ] consensusID : consensus_13640#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 460 fasta sequence [CCACCGAGATATTAAATCCTCCAACATTTTACTGGATAATAACTTTGAAGCCCAGGTTGCTGATTTTGGCCTTGCAAGACNAGCTATGGATGCAGTCACGCATGTAACTACACGGGTGATGGGAACTTTTGGTTATCNGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAGATCTGATGTATTCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGTTGACGCATCAAAACCATTGGGTGATGAGAGCCTTGTTGAGTGGGTAAGCTATATCAGTAACTAGAAATCATTTTTTTTTAGATAATGGAAGATGAGTATATTGAAATTAGTATGTTCAATAAGATTTTTGCCCCTGTATGATCAAATGAAAGCAAATGGAGAAATATATTTTATCAACTGTATTTGGAATAGCCAACTTGGACTCCATTTCCAAAGATTCTAA] [+] EMBL AU056701 [CCACCGAGATATTAAATCCTCCAACATTTTACTGGATAATAACTTTGAAGCCCAGGTTGCTGATTTTGGCCTTGCAAGACNAGCTATGGATGCAGTCACGCATGTAACTACACGGGTGATGGGAACTTTTGGTTATCNGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAGATCTGATGTATTCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGTTGACGCATCAAAACCATTGGGTGATGAGAGCCTTGTTGAGTGGGTAAGCTATATCAGTAACTAGAAATCATTTTTTTTTAGATAATGGAAGATGAGTATATTGAAATTAGTATGTTCAATAAGATTTTTGCCCCTGTATGATCAAATGAAAGCAAATGGAGAAATATATTTTATCAACTGTATTTGGAATAGCCAACTTGGACTCCATTTCCAAAGATTCTAA] consensusID : consensus_13640#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 250 fasta sequence [ACTTCTCTACGCGGTCACGGGTTCCCCAGCGGAGGAGAAAGATACTAGTAGCAGCTGCAGCTACACTCTAGTAGTAGTGGCTACTAGTACTAGCTAGCCTCCAATGGNGTCCTCACCGTNTCCNTCCCCGGGCACCGCAACTCCCGCCACCGCCGCCGCCGCGCCTTCCACCGCNACCCCAACACCCGCNACGCAGCCCAATGCCACGCCGGCCGACCCCTCCATCANTCCCCCGGCCGCNTCCCCTCCC] [+] EMBL AU163435 [ACTTCTCTACGCGGTCACGGGTTCCCCAGCGGAGGAGAAAGATACTAGTAGCAGCTGCAGCTACACTCTAGTAGTAGTGGCTACTAGTACTAGCTAGCCTCCAATGGNGTCCTCACCGTNTCCNTCCCCGGGCACCGCAACTCCCGCCACCGCCGCCGCCGCGCCTTCCACCGCNACCCCAACACCCGCNACGCAGCCCAATGCCACGCCGGCCGACCCCTCCATCANTCCCCCGGCCGCNTCCCCTCCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13640#0 GTACTACTACACTCCTAATCTCTCTCTCTTTCTCGAGTGGAATCCATTGATCCATTGTGT 60 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 AGTGGGAGANAGACTTCTCTACGCGGTCACGGGTTCCCCAGCGGAGGAGAAAGATAGATA 120 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 GAGAGAGCAAAGAGCAAAAAAATCTCTCTTTTTTCTTCTTGTTGTTTCTGCAGTTACCTT 180 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TGTCTTGCCTTCAATGCCACCGCTTTACTGCCGGATCTGAGGAAAGCTCCCATCCTTGCT 240 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 GAGTTCTTGTGCTGCTTCTTCCACAATTCTTCCTTTTGTTGAGAATTTTGCCTTCCATCT 300 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 GCTTAATCGGTGACAAAGGTGGTGGGATCTTGCTTCTCTTCCTGCAAGAAAAGGCTCGTT 360 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TTTTTGTTTCGCCGTTTGCTGCTTGCTCAGGCAGGAGGAAGGCGATGCTGTTCTTGCTGA 420 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TTTCAGTCTTCTTCTTCCGATGGTCGAGGTGAGGTTTGTTGCTACTTCACCTTTCGCTTC 480 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 GTTGCGCTCTGCGGAGAGAAAGAAAGCAAAGGTGGTGGAAAAGAAGCGAAAATTTTGCTT 540 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 GCTTCCTCTGCAAATCTGAGGAATTTTCTCGCAGAAAGCCTGAATTCCCTCTGAATTCCG 600 consensus_13640#2 ------------------------------------------------------ACTTCT 6 consensus_13640#1 -----------------------------CCACCGAGATATTAAATCCTCCAACATTTTA 31 * * consensus_13640#0 GTGCATGGAAAG---ATCGTCCCCTCCATTTCCAAGAAGAAGAAGATACTAGTAGCAGCT 657 consensus_13640#2 CTACGCGGTCAC---GGGTTCCCCAGCG-------GAGGAGAAAGATACTAGTAGCAGCT 56 consensus_13640#1 CTGGATAATAACTTTGAAGCCCAGGTTGCTGATTTTGGCCTTGCAAGACNAGCTATGGAT 91 * * ** * ** ** * * consensus_13640#0 GCAGCTAC-------ACTCTAGTAGTAGTGGCTACTAGTACTAGCTAGCCTCCAATG-GC 709 consensus_13640#2 GCAGCTAC-------ACTCTAGTAGTAGTGGCTACTAGTACTAGCTAGCCTCCAATG-GN 108 consensus_13640#1 GCAGTCACGCATGTAACTACACGGGTGATGGGAACTTTTGGTTATCNGGCTCCGGAGTAT 151 **** ** *** * ** *** *** * * * **** * consensus_13640#0 GTCCTCACCGTCTCCCTCCCCGGG-----CACCGCAACTCCCGCCACCGCCGCCGCCGCG 764 consensus_13640#2 GTCCTCACCGTNTCCNTCCCCGGG-----CACCGCAACTCCCGCCACCGCCGCCGCCGCG 163 consensus_13640#1 GCTTCGAGTGGCAAGTTGACTGAGAGATCTGATGTATTCTCTTTTGGCGTTGTTCTCTTA 211 * * * * * * * * * * ** * * consensus_13640#0 CCTTCCACCGCGACCCCAACACCCGC-GACGCAGCCCAATGCCACGCCGGCCGACCCCTC 823 consensus_13640#2 CCTTCCACCGCNACCCCAACACCCGC-NACGCAGCCCAATGCCACGCCGGCCGACCCCTC 222 consensus_13640#1 GAGCTTATTACCGGTAGAAAGCCTGTTGACGCATCAAAACCATTGGGTGATGAGAGCCTT 271 * * ** ** * ***** * ** * * *** consensus_13640#0 CATCACTCCCCCGGCCGCGTCCCCTCCCCTTCCCTCCGCCGCCACGCCACCCCCACAGCC 883 consensus_13640#2 CATCANTCCCCCGGCCGCNTCCCCTCCC-------------------------------- 250 consensus_13640#1 GTTGAGTGGGTAAGCTATATCAGTAACTAGAAATCATTTTTTTTTAGATAATGGAAGATG 331 * * * ** ** * consensus_13640#0 CGATTCCCCGCCGCCCTCTCCGCCACCAGCTCCTCCGGTCGCAGTGCCACCGCCGGCCAC 943 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 AGTATATTGAAATTAGTATGTTCAATAAGATTTTTGCCCCTGTATGATCAAATGAAAGCA 391 consensus_13640#0 CGTGCCACCGCCGCCTGTACCCGTTGCGTCTCCACCACCAACCCCGTCAGCCACATTGCC 1003 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 AATGGAGAAATATATTTTATCAACTGTATTTGGAATAGCCAACTTGGACTCCATTTCCAA 451 consensus_13640#0 GCCGCCGTCGCCACCGGCTTCAGTGCCGGTGCCACCTACACCTGCTACTACCCCTCCAAA 1063 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 AGATTCTAA--------------------------------------------------- 460 consensus_13640#0 GCCGTCGCCTGTGCAGCAACCCCCAGTGGCTGCATCACCACCTCCATCGTCTCCGGCTGA 1123 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TTTGCCGCCGCCTAATCCGCCGGCTCGCTCAGACACGCCGCCGGTAGTGCAGTCACCTCC 1183 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 ACCGCCGCACCGGAGATCGCCGAGAACGCCATGGGCTCCACCGATGGCGCCGTCGCCTTC 1243 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TGGAAGTCCTACCAAGCCTTCTCCAGCTAGTCCATCACCAATTGCTGGAGATCCAATCAT 1303 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 CCCTACACCCAATAACCCTTCGTCGCCTCTGGCGACGCCATCAGCACCAGGCTCTGGTAC 1363 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TCCTGTGGTGACGCCATCTGCACCAGTCTCTGGCCCTCCATCGCCAGGCACGGCTCCAGC 1423 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 CACGGCAGCTGATCGATCCAACAAGTCATTAAGTCCCAACACGCAGGACGGCAGCGTCTC 1483 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 GTCGAGCGATGGTGGAATGAGCTCAAGTGCAAAGGCGGGCATCGGTGTAGTCGTCGCTAT 1543 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TCTTGTGCTTAGCTTGGTAGGAGCTGCATTTTGGTACAAGAAGAAACGGAGGAGAGCAAC 1603 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 CGGTTACCATGCAGGATTTGTGATGCCATCGCCTGCCTCGTCTCCACAAGTGTTAGGGTA 1663 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TTCAGGTAAAACTAACTACAGTGCTGGCAGTCCTGATTACAAAGAAACAATGTCGGAGTT 1723 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 CAGCATGGGCAATTGTCGATTCTTCACTTACGAGGAATTGCACCAGATCACAAATGGTTT 1783 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TGCAGCGAAGAACCTGCTAGGGGAAGGTGGGTTTGGGTCTGTTTACAAGGGTTGCTTGGC 1843 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TGATGGAAGAGAGGTTGCCGTTAAGAAACTGAAAGGTGGTGGTGGGCAGGGGGAACGTGA 1903 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 GTTCCAGGCTGAGGTGGAGATAATCAGTCGTGTGCACCACCGCCATCTAGTTTCTCTTGT 1963 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TGGGTATTGCATTTCGGGGGACCAGAGGTTGCTTGTCTATGATTTTGTGCCCAATGACAC 2023 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 ACTGCACCATCATCTTCATGGACGTGGAATGCCGGTTTTGGAGTGGTCAGCTAGGGTTAA 2083 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 AATTGCAGCTGGCTCAGCTCGAGGGATAGCATATCTTCATGAAGATTGCCATCCCCGAAT 2143 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TATCCACCGAGATATTAAATCCTCCAACATTTTACTGGATAATAACTTTGAAGCCCAGGT 2203 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TGCTGATTTTGGCCTTGCAAGACTAGCTATGGATGCAGTCACGCATGTAACTACACGGGT 2263 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 GATGGGAACTTTTGGTTATCTGGCTCCGGAGTATGCTTCGAGTGGCAAGTTGACTGAGAG 2323 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 ATCTGATGTATTCTCTTTTGGCGTTGTTCTCTTAGAGCTTATTACCGGTAGAAAGCCTGT 2383 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TGACGCATCAAAACCATTGGGTGATGAGAGCCTTGTTGAGTGGGCTAGGCCATTGCTCAC 2443 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 AGAAGCAATTGAGACTGGCAACGTTGGGGAGCTGATTGACTCCAGGCTGGACAAGAACTT 2503 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 CAATGAAGCTGAAATGTTTCGAATGATCGAAGCTGCGGCAGCTTGCATTCGACATTCAGC 2563 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 ATCTAGGAGACCCCGGATGAGCCAGGTGGTGCGTGTTCTTGATAGCTTAGCTGACGTCGA 2623 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TCTAAGCAATGGTATTCAGCCTGGTAAGAGCGAAATGTTCAATGTGGCAAACACGGCAGA 2683 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 AATCAGGCTGTTTCAGCGGATGGCTTTTGGTAGCCAAGATTTCACAACTGATTTCACCCA 2743 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 ATCTAGCTGGGATAGTCGTAGTAGAGATGTTGATGCCTCTGGTTCGAGGCCCTTGTAATC 2803 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 ATAGTCTAATACTCCTCTAATTAGCTAGGGTATTGTTGCATTGGATTTGTTTCATCTGAT 2863 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 TTTGTTTTCTTCTTTTTTGTGGCCATCTCTGTCAACTAGGAGTAATGTATATCATGCGTC 2923 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 CCACTAAGAAAAGTGTATATTGATTGCACTGAGCGTGCCTGATTCTACAAAATCTGACAG 2983 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 ACAGAAGATTTACTAGTACTAGCCCTTGAAGGAACCAATGAATTGCCTCTGTTGGTGGTG 3043 consensus_13640#2 ------------------------------------------------------------ consensus_13640#1 ------------------------------------------------------------ consensus_13640#0 ACTGAACCTGCATATTCCACTCTATATTTCCTCAAAAA 3081 consensus_13640#2 -------------------------------------- consensus_13640#1 -------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||