These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13648#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2018 fasta sequence [TTTCTTTCTCCAAGAAAGAACGCCGAACAAGCGCCGACGAAAAACGGTTCCTCGTTATTTCTCTCCAACGCGCGCGCACGGGCTATTTCTACCCCCGCCGCCGAGTAGTTAGGCGTCCAAAGTTTCGGGAGTTCATCGTGAACGGTGATCGATCCAAAGAACAACAACTCGGAGCAAAGCTAGCTAACGAAGTTAGT-TCCAAACAAAGCTAGCTTATCGCGATTAGCTAGCTAGAAGAGAGTTAGCTAGGCGCCATGGAGCTAGGCGTGCCACTGCCACGACGGCCCGTGCCCGGTAGCTACGGCGTGCCGTTCGTCTCGGCGGTGCGCGACCGCCTCGATTTCTACTACTTGCAGGGGCAGGACAAGTACTTCGAGTCGCGCGCCGAGAGGTACGGCTCCACCGTCGTCCGCATCAACGTCCCGCC-TGGCCCATTCAT-GGCGCGCGACCCCCGCGTGGTGGCGCTCCTCGACGCCAAGAGC-TTCCCCG-TCCTC-TTCGACGTCGCCAAGGTCGAGAAGCGGGACGTGTTCACCGGCACGTTCATGCCGTCCACCTCCCTCACCGGCGGCTACCGCGTCTGCGCCTACCTCGACCCGTCCGAGCCCAACCACGCCAAGATCAAGCAGCTGCTCCTCTCCCTCCTGGTCTCTCGCAAGGACGCCTTCGTCCCGGTCTTCCGCTCCAACTTCGGCGCGCTCCTCGACACCGTCGAGTCGCAGCTCGCGAGCGGCGGCGGCAAGTCCGACTTCACCGCCCTCAACGATGCCACCTCCTTCGAGTTCATCGGCGAGGCGTACTTCGGCGTGCGTCCCTCCGCGTCGAGCTCCCTCGGCACCGGCGGGC-CGACCAAGGCCGCCCTGTGGCTCCTATGGCAGCTCGCCCCGCTCACCACGCTCGGCCTGCCCATGATCATCGAGGATCCGCTCCTCCACACGCTGCCGCTGCCACCCTTCCTCATCAGCTCCGACTACAAGGCGCTGTACGCGTACTTCGCCGCCGCGGCGTCGCAGGCGCTCGACGCCGCCGAGGGCCTTGGCCTGTCGCGGGAGGAGGCCTGCCACAACCTGCTGTTCGCGACGGTGTTCAACAGCTACGGCGGCTTCAAGCTGCTGCTCCCGCAGATCCTGTCGCGCGTCGCGCAGGCCGGCGAGAAGCTCCACGAGAGGCTCGCCGCGGAGATACGGAGCGCGGTGGCCGACGCCGGCGGCAACGTGACGCTGGCCGCTCTGGAGAAGATGGAGCTGACCAGGTCGGTGGT-GTGGGAGGCGCTGCGGCTGGACCCGCCGGTCAGGTTCCAGTACGGGCGCGCCAAGGCCGACCTGGAGATCGAGAGCCACGACGCGTCGTTCGCGATCAAGAAGGGGGAGATGCTGTTCGGCTACCAGCCGTGCGCCACCAGGGACCCGCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGTCGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAATGGGCGAGA-GACGGAGAACCCTA-GCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTC-GTCGAGCTCTTCCTCCGGTACGACACC-TTCACCGC-CGAGGCCGGCA-AAAAGGTGGTCATCACCGGGGTCACCAAAGCTTC-AACCTCCGC-CGTCAATCGTACTGCTTAAGC-CGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACT-AATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTG-TTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTACAGGGCTGACAGTGTCTTTAAACACCTC-TAATATGTATCGGATCAATCTGCCCTAGTCATGTATAATTTGTGAAGATCCACTTTCTTTAATTATTCAATCATGCATTTTTTTTTTCTAAAAAAAA] [+] EMBL AK066138 [TTTCTTTCTCCAAGAAAGAACGCCGAACAAGCGCCGACGAAAAACGGTTCCTCGTTATTTCTCTCCAACGCGCGCGCACGGGCTATTTCTACCCCCGCCGCCGAGTAGTTAGGCGTCCAAAGTTTCGGGAGTTCATCGTGAACGGTGATCGATCCAAAGAACAACAACTCGGAGCAAAGCTAGCTAACGAAGTTAGT TCCAAACAAAGCTAGCTTATCGCGATTAGCTAGCTAGAAGAGAGTTAGCTAGGCGCCACGCAGCTAGGCGTGCCACTGCCACGACGGCCCGTGCCCGGTAGCTACGGCGTGCCGTTCGTCTCGGCGGTGCGCGACCGCCTCGATTTCTACTACTTGCAGGGGCAGGACAAGTACTTCGAGTCGCGCGCCGAGAGGTACGGCTCCACCGTCGTCCGCATCAACGTCCCGCC TGGCCCATTCAT GGCGCGCGACCCCCGCGTGGTGGCGCTCCTCGACGCCAAGAGC TTCCCCG TCCTC TTCGACGTCGCCAAGGTCGAGAAGCGGGACGTGTTCACCGGCACGTTCATGCCGTCCACCTCCCTCACCGGCGGCTACCGCGTCTGCGCCTACCTCGACCCGTCCGAGCCCAACCACGCCAAGATCAAGCAGCTGCTCCTCTCCCTCCTGGTCTCTCGCAAGGACGCCTTCGTCCCGGTCTTCCGCTCCAACTTCGGCGCGCTCCTCGACACCGTCGAGTCGCAGCTCGCGAGCGGCGGCGGCAAGTCCGACTTCACCGCCCTCAACGATGCCACCTCCTTCGAGTTCATCGGCGAGGCGTACTTCGGCGTGCGTCCCTCCGCGTCGAGCTCCCTCGGCACCGGCGGGC CGACCAAGGCCGCCCTGTGGCTCCTATGGCAGCTCGCCCCGCTCACCACGCTCGGCCTGCCCATGATCATCGAGGATCCGCTCCTCCACACGCTGCCGCTGCCACCCTTCCTCATCAGCTCCGACTACAAGGCGCTGTACGCGTACTTCGCCGCCGCGGCGTCGCAGGCGCTCGACGCCGCCGAGGGCCTTGGCCTGTCGCGGGAGGAGGCCTGCCACAACCTGCTGTTCGCGACGGTGTTCAACAGCTACGGCGGCTTCAAGCTGCTGCTCCCGCAGATCCTGGCGCGCGTCGCGCAGGCCGGCGAGAAGCTCCACGAGAGGCTCGCCGCGGAGATACGGAGCGCGGTGGCCGACGCCGGCGGCAACGTGACGCTGGCCGCTCTGGAGAAGATGGAGCTGACCAGGTCGGTGGT GTGGGAGGCGCTGCGGCTGGACCCGCCGGTCAGGTTCCAGTACGGGCGCGCCAAGGCCGACCTGGAGATCGAGAGCCACGACGCGTCGTTCGCGATCAAGAAGGGGGAGATGCTGTTCGGCTACCAGCCGTGCGCCACCAGGGACCCGCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGTCGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAATGGGCGAGA GACGGAGAACCCTA GCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTC GTCGAGCTCTTCCTCCGGTACGACACC TTCACCGC CGAGGCCGGCA AAAAGGTGGTCATCACCGGGGTCACCAAAGCTTC AACCTCCGC CGTCAATCGTACTGCTTAAGC CGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACT AATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTG TTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTACAGGGCTGACAGTGTCTTTAAACACCTC TAATATGTATCGGATCAATCTGCCCTAGTCATGT ] [+] EMBL AK061758 [ TTCGGGAGTTCATCGTGAACGGTGATCGATCCAAAGAACAACAACTCGGAGCAAAGCTAGCTAACGAAGTTAGT TCCAAACAAAGCTAGCTTATCGCGATTAGCTAGCTAGAAGAGAGTTAGCTAGGCGCCATGGAGCTAGGCGTGCCACTGCCACGACGGCCCGTGCCCGGTAGCTACGGCGTGCCGTTCGTCTCGGCGGTGCGCGACCGCCTCGATTTCTACTACTTGCAGGGGCAGGACAAGTACTTCGAGTCGCGCGCCGAGAGGTACGGCTCCACCGTCGTCCGCATCAACGTCCCGCC TGGCCCATTCAT GGCGCGCGACCCCCGCGTGGTGGCGCTCCTCGACGCCAAGAGC TTCCCCG TCCTC TTCGACGTCGCCAAGGTCGAGAAGCGGGACGTGTTCACCGGCACGTTCATGCCGTCCACCTCCCTCACCGGCGGCTACCGCGTCTGCGCCTACCTCGACCCGTCCGAGCCCAACCACGCCAAGATCAAGCAGCTGCTCCTCTCCCTCCTGGTCTCTCGCAAGGACGCCTTCGTCCCGGTCTTCCGCTCCAACTTCGGCGCGCTCCTCGACACCGTCGAGTCGCAGCTCGCGAGCGGCGGCGGCAAGTCCGACTTCACCGCCCTCAACGATGCCACCTCCTTCGAGTTCATCGGCGAGGCGTACTTCGGCGTGCGTCCCTCCGCGTCGAGCTCCCTCGGCACCGGCGGGC CGACCAAGGCCGCCCTGTGGCTCCTATGGCAGCTCGCCCCGCTCACCACGCTCGGCCTGCCCATGATCATCGAGGATCCGCTCCTCCACACGCTGCCGCTGCCACCCTTCCTCATCAGCTCCGACTACAAGGCGCTGTACGCGTACTTCGCCGCCGCGGCGTCGCAGGCGCTCGACGCCGCCGAGGGCCTTGGCCTGTCGCGGGAGGAGGCCTGCCACAACCTGCTGTTCGCGACGGTGTTCAACAGCTACGGCGGCTTCAAGCTGCTGCTCCCGCAGATCCTGTCGCGCGTCGCGCAGGCCGGCGAGAAGCTCCACGAGAGGCTCGCCGCGGAGATACGGAGCGCGGTGGCCGACGCCGGCGGCAACGTGACGCTGGCCGCTCTGGAGAAGATGGAGCTGACCAGGTCGGTGGT GTGGGAGGCGCTGCGGCTGGACCCGCCGGTCAGGTTCCAGTACGGGCGCGCCAAGGCCGACCTGGAGATCGAGAGCCACGACGCGTCGTTCGCGATCAAGAAGGGGGAGATGCTGTTCGGCTACCAGCCGTGCGCCACCAGGGACCCGCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGTCGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAATGGGCGAGA GACGGAGAACCCTA GCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTC GTCGAGCTCTTCCTCCGGTACGACACC TTCACCGC CGAGGCCGGCA AAAAGGTGGTCATCACCGGGGTCACCAAAGCTTC AACCTCCGC CGTCAATCGTACTGCTTAAGC CGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACT AATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTG TTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTACAGGGCTGACAGTGTCTTTAAACACCTC TAATATGTATCGGATCAATCTGCCCT ] [+] EMBL AY055775 [ ccgGAAC GTGATCGATCCAAAGAACAACAACTCGGAGCAAAGCTAGCTAACGAAGTTAGT TCCAAACAAAGCTAGCTTATCGCGATTAGCTAGCTAGAAGAGAGTTAGCTAGGCGCCATGGAGCTAGGCGTGCCACTGCCACGACGGCCCGTGCCCGGTAGCTACGGCGTGCCGTTCGTCTCGGCGGTGCGCGACCGCCTCGATTTCTACTACTTGCAGGGGCAGGACAAGTACTTCGAGTCGCGCGCCGAGAGGTACGGCTCCACCGTCGTCCGCATCAACGTCCCGCC TGGCCCATTCAT GGCGCGCGACCCCCGCGTGGTGGCGCTCCTCGACGCCAAGAGC TTCCCCG TCCTC TTCGACGTCGCCAAGGTCGAGAAGCGGGACGTGTTCACCGGCACGTTCATGCCGTCCACCTCCCTCACCGGCGGCTACCGCGTCTGCGCCTACCTCGACCCGTCCGAGCCCAACCACGCCAAGATCAAGCAGCTGCTCCTTTCCCTCCTGGTCTCTCGCAAGGACGCCTTCGTCCCGGTCTTCCGCTCCAACTTCGGCGCGCTCCTCGACACCGTCCAGTCGCAGCTCGCGAGCGGCGGCGGCAAGTCCGACTTCACCGCCCTCAACGATGCCACCTCCTTCGAGTTCATCGGCAAGGCGTACTTCGGCGTGCGTCCCTCCGCGTCGAGCTCCCTCGGCACCGGCGGGCTCGACCAAGGTCG CCTGTGGCTCCTATGGCAGCTCGCCCCGCTCACCACGCTCGGCCTGCCCATGATCATCGAGGATCCGCTCCTCCACACGCTGCCGCTGCCACCCTTCCTCATCAGCTCCGACTACAAGGCGCTGTACGCGTACTTCGCCGCCGCGGCGTCGCAGGCGCTCGACGCCGCCGAGGGCCTTGGCCTGTCGCGGGAGGAGGCCTGCCACAACCTGCTGTTCGCGACGGTGTTCAACAGCTACGGCGGCTTCAAGCTGCTGCTCCCGCAGATCCTGTCGCGCGTCGCGCAGGCCGGCGAGAAGCTCCACGAGAGGCTCGCCGCGGAGATACGAAGCGCGGTGGCCGACGCCGGCGGCAACGTGACGCTGGCCGCTCTGGAGAAGATGGAGCTGACCAGGTCGGTGGT GTGGGAGGCGCTGCGGCTGGACCCGCCGGTCAGGTTCCAGTACGGGCGCGCCAAGGCCGACCTGGAGATCGAGAGCCACGACGCGTCGTTCGCGATCAAGAAGGGGGAGATGCTGTTCGGCTACCAGCCGTGCGCCACCAGGGACCCGCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGTCGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAATGGGCGAGA GACGGAGAACCCTA GCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTC GTCGAGCTCTTCCTCCGGTACGACACC TTCACCGC CGAGGCCGGCA AAAAGGTGGTCATCACCGGGGTCACCAAAGCTTC AACCTCCGC CGTCAATCGTACTGCTTAAGC CGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACT AATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTG TTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTACAGGGCTGACAGTGTCTTTAAACACCTC TAATAT ] [+] EMBL C72393 [ TGATCGATCCAAAGAACAACAACTCGGAGCAAAGCTAGCTAACGAAGTTAGTNTCCAAACAAAGCTAGCTTATCGCGATTAGCTAGCTAGAAGAGAGTTAGCTAGGCGCCATGGAGCTAGGCGTGCCACTGCCACGACGGCCCGTGCCCGGTAGCTACGGCGTGCCGTTCGTCTCGGCGGTGCGCGACCGCCTCGATTTCTACTACTTGCAGGGGCAGGACAAGTACTTCGAGTCGCGCGCCGAGAGGTACGGCTCCACCGTCGTCCGCATCAACGTCCCGCCTTGGCCCATTCATGGGCGCGCGAACCCCGCGTGGTGGCGCTCCTCGACGCCAAGAGCTTTNCCCGTTCCTCTTTGGAGGTCGC ] [+] EMBL AY310358 [ GATCGATCCAAAGAACAACAACTCGGAGCAAAGCTAGCTAACGAAGTTAGT TCCAAACAAAGCTAGCTTATCGCGATTAGCTAGCTAGAAGAGAGTTAGCTAGGCGCCATGGAGCTAGGCGTGCCACTGCCACGACGGCCCGTGCCCGGTAGCTACGGCGTGCCGTTCGTCTCGGCGGTGCGCGACCGCCTCGATTTCTACTACTTGCAGGGGCAGGACAAGTACTTCGAGTCGCGCGCCGAGAGGTACGGCTCCACCGTCGTCCGCATCAACGTCCCGCC TGGCCCATTCAT GGCGCGCGAACCCCGCGTGGTGGCGCTCCTCGACGCCAAGAGC TTCCCCG TCCTC TTCGACGTCGCCAAGGTCGAGAAGCGGGACGTGTTCACCGGCACGTTCATGCCGTCCACCTCCCTCACCGGCGGCTACCGCGTCTGCGCCTACCTCGACCCGTCCGAGCCCAACCACGCCAAGATCAAGCAGCTGCTCCTCTCCCTCCTGGTCTCTCGCAAGGACGCCTTCGTCCCGGTCTTCCGCTCCAACTTCGGCGCGCTCCTCGACACCGTCGAGTCGCAGCTCGCGAGCGGCGGCGGCAAGTCCGACTTCACCGCCCTCAACGATGCCACCTCCTTCGAGTTCATCGGCGAGGCGTACTTCGGCGTGCGTCCCTCCGCGTCGAGCTCCCTCGGCACCGGCGGGC CGACCAAGGCCGCCCTGTGGCTCCTATGGCAGCTCGCCCCGCTCACCACGCTCGGCCTGCCCATGATCATCGAGGATCCGCTCCTCCACACGCTGCCGCTGCCACCCTTCCTCATCAGCTCCGACTACAAGGCGCTGTACGCGTACTTCGCCGCCGCGGCGTCGCAGGCGCTCGACGCCGCCGAGGGCCTTGGCCTGTCGCGGGAGGAGGCCTGCCACAACCTGCTGTTCGCGACGGTGTTCAACAGCTACGGCGGCTTCAAGCTGCTGCTCCCGCAGATCCTGTCGCGCGTCGCGCAGGCCGGCGAGAAGCTCCACGAGAGGCTCGCCGCGGAGATACGGAGCGCGGTGGCCGACGCCGGCGGCAACGTGACGCTGGCCGCTCTGGAGAAGATGGAGCTGACCACGTCGGTGGT GTGGGAGGCGCTGCGGCTGGACCCGCCGGTCAGGTTCCAGTACGGGCGCGCCAAGGCCGACCTGGAGATCGAGAGCCACGACGCGTCGTTCGCGATCAAGAAGGGGGAGATGCTGTTCGGCTACCAGCCGTGCGCCACCAGGGACCCGCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGTCGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAATGGGCGAGA GACGGAGAACCCTA GCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTC GTCGAGCTCTTCCTCCGGTACGACACC TTCACCGC CGAGGCCGGCA AAAAGGTGGTCATCACCGGGGTCACCAAAGCTTC AACCTCCGC CGTCAATCGTACTGCTTAAGC CGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACT AATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTG GTGGTATTGTTTGCTGTTGAATTACCATTGTGTATTTTAaaaaaaaaa ] [+] EMBL OSS13809A [ TCGATCCAAAGAACAACAACTCGGAGCAAAGCTAGCTAACGAAGTTAGTNTCCAAACAAAGCTAGCTTATCGCGATTAGCTAGCTAGAAGAGAGTTAGCTAGGCGCCATGGAGCTAGGCGTGCCACTGCCACGACGGCCCGTGCCCGGTAGCTACGGCGTGCCGTTCGTTTCGGNGGTGCGCGACCGCCTCGATTTCTACTACTTGCAGGGGCAGGACAAGTACTTCGAGTCGCGCGCCGAGAGGTACGGCTCCACCGTCGTCCGCATCAACGTCCCGCC TGGCCCATTCAT GGCGCGCGACCCCCGCNTGGTGGCGCTNCTCGACGCCAAGAGC TTNCCCG TCCTC TTCGACGTCGCCAAGGTCGAGAAGCGG ] [+] EMBL CF325495 [ GCAGATCCTGTCGCGCGTCGCGCAGGCCGGCGAGAAGCTCCACGAGAGGCTCGCCGCGGAGATACGGAGCGCGGTGGCCGACGCCGGCGGCAACGTGACGCTGGCCGCTCTGGAGAAGATGGAGCTGACCAGGTCGGTGGTGGTGGGAGGCGCTGCGGCTGGACCCGCCGGTCAGGTTCCAGTACGGGCGCGCCAAGGCCGACCTGGAGATCGAGAGCCACGACGCGTCGTTCGCGATCAAGAAGGGGGAGATGCTGTTCGGCTACCAGCCGTGCGCCACCAGGGACCCGCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGTCGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAATGGGCGAGA GACGGAGAACCCTA GCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTC GTCGAGCTCTTCCTCCGGTACGACACC TTCACCGC CG ] [+] EMBL BI811033 [ AGGGGA GAA CTGCTCCAGTACGTGTACT GTCGAATGGCCGAGA GCCGGAGAACCCTA GCGTTGACAACAA CAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTC GTCGAGCTCTTCCTCCGGTACGACACC TTCACCGC CGA GCCGGCA AAAAGGTGGTCATCACCGGGGTCACCAAAGCTTC AACCTCCGC CGTCAATCGTACTGCTTAAGC CGGCCATCACTTCAGGCGT GGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACT AATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTG TTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTACAGGGCTGACAGTGTCTTTAAACACCTC TAATATGTATCGGATCAATCTGCCCTAGTCATGTCTAATTTGTGAAGATCCACTTTCTTTAATTATTCAATCATGCATTTTTTTTTTCTAAAAAAAA] [+] EMBL BI809245 [ GGGCGAGATGACGGAGTACCCTAGGCGTTGACTACAA CAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTC GTCGAGCTCTTCCTCCGGTACGACACCGTTCACCGC CGAGGCCGGC AAAAGGTGGTCATCACCGGGGTCACCAAAGCTTC AACCTCCGC CGTCAATCGTACTGCTTAAGC CGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGC ATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACT AATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTG TTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTACAGGGCTGACAGTGTCTTTAAACACCTC TAATATGTATCGGATC ATCTGCCCTAaaaaaaaaa ] [+] EMBL BM420355 [ AGTGCCCCGGCAAGAACCTGGTGGTGCTC TCGGAA GCTNTTGCTCAGTCGAGCTCTTCCTCCGGTACGACACC TTCACCGCACGAGGCCGGCANAAAAGGTGGTCATCACCGGGGTCACCCAAGCTTCAAACCTCCGCACGTCAATCGTACTGCTTAAGCACGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCCATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACTGAATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTGNCTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTACAGGGCTGACNGTGTCTTTAAACACCTCGTAATATGTATCGGATCAATCTGCCCTAGTCATGTNTAATTTGTGAAGATCCNCTTTCTTTAATTATTCAAaaaaaaaa ] consensusID : consensus_13648#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 625 fasta sequence [AGCCACGACGGCGTCGTTCGCGATCAAGAAGGGGAAGATGCTGTTCGGGCTACCANCCGTGCGCCACCAGGGACCCCCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGTCGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAATGGGCGAGAGACGGAGAACCCTAGCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTCGTCGAGCTCTTCCTCCGGTACGACACCTTCACCGCCGAGGCCGGCAAAAAGGTGGTCATCACCGGGGTCACCAAAGCTTCAACCTCCGCCGTCAATCGTACTGCTTAAGCCGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACTAATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTGTTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTACAGGGCTGACAGTGTCTTTAAACACCTCTAATATGTATCGGATCAAAAAAAAAAAAAAAAA] [+] EMBL AU101779 [AGCCACGACGGCGTCGTTCGCGATCAAGAAGGGGAAGATGCTGTTCGGGCTACCANCCGTGCGCCACCAGGGACCCCCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGTCGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAATGGGCGAGAGACGGAGAACCCTAGCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTCGTCGAGCTCTTCCTCCGGTACGACACCTTCACCGCCGAGGCCGGCAAAAAGGTGGTCATCACCGGGGTCACCAAAGCTTCAACCTCCGCCGTCAATCGTACTGCTTAAGCCGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACTAATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTGTTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTACAGGGCTGACAGTGTCTTTAAACACCTCTAATATGTATCGGATCAAAAAAAAAAAAAAAAA] [+] EMBL AU182268 [ GGCGAGGAGGGNAGGAAGCTGCTGCAATACGTGTACTGGTCGAATGGGCGAGAGACGGAGAACCCTAGCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGTGGTGCTCGTCGGAAGGCTGTTGCTCGTCGAGCTCTTCCTCCGGTACGACACCTTCACCGCCGAGGCCGGCAAAAAGGTGGTCATCACCGGGGTCACCAAAGCTTCAACCTCCGCCGTCAATCGTACTGCTTAAGCCGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACACTACTAATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATTTTGTTGTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTAaaaaa ] consensusID : consensus_13648#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 455 fasta sequence [NCCAAGAACCTGGTGTGCTCTCGGAAGCTGTTGCTCGTCGAGCTCTTCCTCCGGTACGACACCTTCACCGCCGAGCCGCCCAAAAGGTGGTCATCACCGGGGTCACCCAAGCTTCAACCTCCGCCGTCAATCGTACTGCTTAAGCCGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATCCCATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACNCTACTAATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATCTTTGTTNCTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTAACACGGGCTGACCGTGTCTTTAAACCCCTCTAATATGTATCGGATCCATCTCCCTAGTCATNTCTAATTTGTGAAGATCCCCTTTCTTTAATTATTCCAAAAAAAAAA] [+] EMBL BM038892 [NCCAAGAACCTGGTGTGCTCTCGGAAGCTGTTGCTCGTCGAGCTCTTCCTCCGGTACGACACCTTCACCGCCGAGCCGCCCAAAAGGTGGTCATCACCGGGGTCACCCAAGCTTCAACCTCCGCCGTCAATCGTACTGCTTAAGCCGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAGCTCCGTCCTACGCATATCCCATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACNCTACTAATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATCTTTGTTNCTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTAACACGGGCTGACCGTGTCTTTAAACCCCTCTAATATGTATCGGATCCATCTCCCTAGTCATNTCTAATTTGTGAAGATCCCCTTTCTTTAATTATTCCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13648#0 TTTCTTTCTCCAAGAAAGAACGCCGAACAAGCGCCGACGAAAAACGGTTCCTCGTTATTT 60 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 CTCTCCAACGCGCGCGCACGGGCTATTTCTACCCCCGCCGCCGAGTAGTTAGGCGTCCAA 120 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 AGTTTCGGGAGTTCATCGTGAACGGTGATCGATCCAAAGAACAACAACTCGGAGCAAAGC 180 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 TAGCTAACGAAGTTAGTTCCAAACAAAGCTAGCTTATCGCGATTAGCTAGCTAGAAGAGA 240 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 GTTAGCTAGGCGCCATGGAGCTAGGCGTGCCACTGCCACGACGGCCCGTGCCCGGTAGCT 300 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 ACGGCGTGCCGTTCGTCTCGGCGGTGCGCGACCGCCTCGATTTCTACTACTTGCAGGGGC 360 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 AGGACAAGTACTTCGAGTCGCGCGCCGAGAGGTACGGCTCCACCGTCGTCCGCATCAACG 420 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 TCCCGCCTGGCCCATTCATGGCGCGCGACCCCCGCGTGGTGGCGCTCCTCGACGCCAAGA 480 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 GCTTCCCCGTCCTCTTCGACGTCGCCAAGGTCGAGAAGCGGGACGTGTTCACCGGCACGT 540 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 TCATGCCGTCCACCTCCCTCACCGGCGGCTACCGCGTCTGCGCCTACCTCGACCCGTCCG 600 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 AGCCCAACCACGCCAAGATCAAGCAGCTGCTCCTCTCCCTCCTGGTCTCTCGCAAGGACG 660 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 CCTTCGTCCCGGTCTTCCGCTCCAACTTCGGCGCGCTCCTCGACACCGTCGAGTCGCAGC 720 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 TCGCGAGCGGCGGCGGCAAGTCCGACTTCACCGCCCTCAACGATGCCACCTCCTTCGAGT 780 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 TCATCGGCGAGGCGTACTTCGGCGTGCGTCCCTCCGCGTCGAGCTCCCTCGGCACCGGCG 840 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 GGCCGACCAAGGCCGCCCTGTGGCTCCTATGGCAGCTCGCCCCGCTCACCACGCTCGGCC 900 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 TGCCCATGATCATCGAGGATCCGCTCCTCCACACGCTGCCGCTGCCACCCTTCCTCATCA 960 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 GCTCCGACTACAAGGCGCTGTACGCGTACTTCGCCGCCGCGGCGTCGCAGGCGCTCGACG 1020 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 CCGCCGAGGGCCTTGGCCTGTCGCGGGAGGAGGCCTGCCACAACCTGCTGTTCGCGACGG 1080 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 TGTTCAACAGCTACGGCGGCTTCAAGCTGCTGCTCCCGCAGATCCTGTCGCGCGTCGCGC 1140 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 AGGCCGGCGAGAAGCTCCACGAGAGGCTCGCCGCGGAGATACGGAGCGCGGTGGCCGACG 1200 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 CCGGCGGCAACGTGACGCTGGCCGCTCTGGAGAAGATGGAGCTGACCAGGTCGGTGGTGT 1260 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 GGGAGGCGCTGCGGCTGGACCCGCCGGTCAGGTTCCAGTACGGGCGCGCCAAGGCCGACC 1320 consensus_13648#1 ------------------------------------------------------------ consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 TGGAGATCGAGAGCCACGACG-CGTCGTTCGCGATCAAGAAGGGGGAGATGCTGTTCGG- 1378 consensus_13648#1 -----------AGCCACGACGGCGTCGTTCGCGATCAAGAAGGGGAAGATGCTGTTCGGG 49 consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 CTACCAGCCGTGCGCCACCAGGGACCCGCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGT 1438 consensus_13648#1 CTACCANCCGTGCGCCACCAGGGACCCCCGGGTGTTCGGCGCCACGGCGAGGGAGTTCGT 109 consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 CGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAA 1498 consensus_13648#1 CGGCGACCGGTTCGTCGGCGAGGAGGGGAGGAAGCTGCTGCAATACGTGTACTGGTCGAA 169 consensus_13648#2 ------------------------------------------------------------ consensus_13648#0 TGGGCGAGAGACGGAGAACCCTAGCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGT 1558 consensus_13648#1 TGGGCGAGAGACGGAGAACCCTAGCGTTGACAACAAGCAGTGCCCCGGCAAGAACCTGGT 229 consensus_13648#2 ----------------------------------------------NCCAAGAACCTGGT 14 ************ consensus_13648#0 GGTGCTCGTCGGAAGGCTGTTGCTCGTCGAGCTCTTCCTCCGGTACGACACCTTCACCGC 1618 consensus_13648#1 GGTGCTCGTCGGAAGGCTGTTGCTCGTCGAGCTCTTCCTCCGGTACGACACCTTCACCGC 289 consensus_13648#2 G-TGCTC-TCGGAAG-CTGTTGCTCGTCGAGCTCTTCCTCCGGTACGACACCTTCACCGC 71 * ***** ******* ******************************************** consensus_13648#0 CGAGGCCGGCAAAAAGGTGGTCATCACCGGGGTCACCAAAGCTTCAACCTCCGCCGTCAA 1678 consensus_13648#1 CGAGGCCGGCAAAAAGGTGGTCATCACCGGGGTCACCAAAGCTTCAACCTCCGCCGTCAA 349 consensus_13648#2 CGAG-CCGCCCAAAAGGTGGTCATCACCGGGGTCACCCAAGCTTCAACCTCCGCCGTCAA 130 **** *** * ************************** ********************** consensus_13648#0 TCGTACTGCTTAAGCCGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAG 1738 consensus_13648#1 TCGTACTGCTTAAGCCGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAG 409 consensus_13648#2 TCGTACTGCTTAAGCCGGCCATCACTTCAGGCGTGGGTCGTCGATCATCCACTCAACCAG 190 ************************************************************ consensus_13648#0 CTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACA 1798 consensus_13648#1 CTCCGTCCTACGCATATGCAATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACA 469 consensus_13648#2 CTCCGTCCTACGCATATCCCATAAGAAATACTCGTACCTGAATTCTTGCATGGCTAAACN 250 ***************** * *************************************** consensus_13648#0 CTACTAATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAAT-TTTGTTG 1857 consensus_13648#1 CTACTAATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAAT-TTTGTTG 528 consensus_13648#2 CTACTAATAAGTGTATGTATTCTGTTTATTTGTTCGATTCCATATTTGTAATCTTTGTTN 310 **************************************************** ****** consensus_13648#0 -TTATTGTTTGCTGTTGAATTACGATTGTGTATTTTA-CA-GGGCTGACAGTGTCTTTAA 1914 consensus_13648#1 -TTATTGTTTGCTGTTGAATTACGATTGTGTATTTTA-CA-GGGCTGACAGTGTCTTTAA 585 consensus_13648#2 CTTATTGTTTGCTGTTGAATTACGATTGTGTATTTTAACACGGGCTGACCGTGTCTTTAA 370 ************************************ ** ******** ********** consensus_13648#0 ACACCTCTAATATGTATCGGATCAATCTGCCCTAGTCATGTATAATTTGTGAAGATCCAC 1974 consensus_13648#1 ACACCTCTAATATGTATCGGATCAAAAAAAAAAAAAAAAA-------------------- 625 consensus_13648#2 ACCCCTCTAATATGTATCGGATCCATCTCCCTAGTCATNTCTAATTTGTGAAGATCCCCT 430 ** ******************** * consensus_13648#0 TTTCTTTAATTATTCAATCATGCATTTTTTTTTTCTAAAAAAAA 2018 consensus_13648#1 -------------------------------------------- consensus_13648#2 TTCTTTAATTATTCCAAAAAAAAAA------------------- 455 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||