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Oryza sativa
cluster # 13655 cluster # 13655       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13655#0 length = 1282 sequences # 8  
consensus_13655#1 length = 679 sequences # 5  

consensusID : consensus_13655#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1282
fasta sequence
                              [AACAACGCTAATCACCAG-CTTATACCACCCCCCACGAACAATATACTGCTTATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAGAAAAAAAAGAAAGAAAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTGCACAGCCACACACCACATAACAAACCTAGAGGAGGCATAACAGCAGTAACGGCCATGGTCGAGCACCTCAAAGCTAAATCATCTCTGACTGGACTCCACTGTGCGCACGTTCGCGCCCGTCATCCCTTCCAGCCTGTCCTTCATTATATCTACAAAGTGGCCAACCATTTCATGGAATTGCTTCAACCCGGAGAGTGGCAAGATTATCGACGAACGATCAGCTCCAGCAACCTCAGAAATCCTCAGGTAATGACCCCTGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTTTGATCTGCCCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAGGCGTTCAACATCTACCTCTGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCCAGCACCAACATCATCAGAAAGTCCAGGAAGGCGCTCTGGAGGTTCCAAGTGTTGCTGATTAGGATGGTTTGGTAGAACATAAAGTCGGGAAGCCTCATTGTTTATTTCCAACAATACATTCCTGAATGCTTCCCAACCTTCTTCACCAGAACTACCAGCCGGAACAATGATTGTACTACGGTTTCTGTTGACAGATGCCTCTGATACCTTGAGGAAGCGGCCTCTCTTGTTCTCCCCAATATCGAAGTAGAACACCTTGGTGTCGAGGCGGAGCTCC-TTGCTGAAGGCGTCGCGCTCGTCGGTGCGGA-TGTAGTAGTCGAAGAGGTCGAGGAACCAGGCGACGCCGGCGACGGGGACGATGATGGTGGAGCGCGTGGAGGACGTCTTCTCGGAGATCTTCAGGTACCTCCCCCTCGGGTTCTCCTTCAGATCGAAGTAGAACAGCTTGTGCTCGAACTGCAGCGTCTTGCTGACGAGCTCCACGTCGCCCCCAACGCCGCCTCCCCCTCCTCCTCCTCCCCCTCCCGCGACACCGGGCCCCGCCATGACGCCCCCGCCTCCTCCTCCTCCCCCGCCGCCGTCCATCGCCGCCGCCGCCGCCGCGAACTAGGGTTTTGAGCTAGGGTTTGGGTTTAAACTCGCTCTCAAACTCGAGTCGTCGAGTCGAGGAGAGGTGGGGATGTGAGGTTGGG]

[-] EMBL CB659936             [AACAACGCTAATCACCAG CTTATACCACCCCCCACGAACAATATACTGCTTATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAGAAAAAAAAGAAAGAAAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTGCACAGCCACACACCACATAACAAACCTAGAGGAGGCATAACAGCAGTAACGGCCATGGTCGAGCACCTCAAAGCTAAATCATCTCTGACTGGACTCCACTGTGCGCACGTTCGCGCCCGTCATCCCTTCCAGCCTGTCCTTCATTATATCTACAAAGTGGCCAACCATTTCATGGAATTGCTTCAACCCGGAGAGTGGCAAGATTATCGACGAACGATCAGCTCCAGCAACCTCAGAAATCCTCAGGTAATGACCCCTGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTTTGATCTGCCCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAGGCGTTCAACATCTACCTCTGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCCAGCACCAACATCATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB659887             [   AACGCTAATCACCAGCCCTATACCACCCCCCACGAACAATATACTGCTTATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAGAAAAAAAAGAAAGAAAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTGCACAGCCACACACCACATAACAAACCTAGAGGAGGCATAACAGCAGTAACGGCCATGGTCGAGCACCTCAAAGCTAAATCATCTCTGACTGGACTCCACTGTGCGCACGTTCGCGCCCGTCATCCCTTCCAGCCTGTCCTTCATTATATCTACAAAGGGGCCAACCATTTCATGGAATTGCTTCAACCCGGAGAGTGGCAAGATTATCGACGAACGATCAGCTCCAGCAACCTCAGAAATCCTCAGGTAATGACCCCTGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTTTGATCTGCCCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAGGCGTTCAACATCTACCTCTGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCCAGCACCAACATCATCAGAAAGTCCAGGAAGGCGCTCTGGAGGTTCCAAGTGTTGCTGATTAGGATGGTTTGGTAGAACATAAAGTCGGGAAGCCTCATTGTTTATTTCCAACAATACATTCCTGAATGCTTCCCAACCTTCTTCACCAGAACTACCAGCCGGAACAATGATTGTACTACGGTTTCTGTTGACAGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB641857             [                                                                                                                                                                                                                                                                                                      CCCTTCCAGCCTGTCCTTCATTATATCTACAAAGTGGCCAACCATTTCATGGAATTGCTTCAACCCGGAGAGTGGCAAGATTATCGACGAACGATCAGCTCCAGCAACCTCAGAAATCCTCAGGTAATGACCCCTGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTTTGATCTGCCCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAGGCGTTCAACATCTACCTCTGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCCAGCACCAACATCATCAGAAAGTCCAGGAAGGCGCTCTGGAGGTTCCAAGTGTTGCTGATTAGGATGGTTTGGTAGAACATAAAGTCGGGAAGCCTCATTGTTTATTTCCAACAATACATTCCTGAATGCTTCCCAACCTTCTTCACCAGAACTACCAGCCGGAACAATGATTGTACTACGGTTTCTGTTGACAGATGCCTCTGATACCTTGAGGAAGCGGCCTCTCTTGTTCTCCCCAATATCGAAGTAGAACACCTTGGTGTCGAGGCGGAGCTCC TTGCTGAAGGCGTCGCGCTCGTCGGTGCGGA TGTAGTAGTCGAAGAGGTCGAGGAACCAGGCGACGCCGGCGACGGGGACGATGATGGTGGAGCGCGTGGAGGACGTCTTCTCGGAGATCTTCAGGTACCTCCCCCTCGGGTTCTCCTTCAGATCGAAGTAGAACAGCTTGTGCTCGAACTGCAGCGTCTTGCT                                                                                                                                                                                                                             ]
[-] EMBL CB659886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAATGATTGTACTACGGTTTCTGTCGACAGATGCCTGTGATACCTTGAGGAAGCGGCCTCTATTGTTCTCCCCAATATCGAAGTAGAACACCTTGGTGTCGAGGCGGAGCTCC TTGGTGAAGGCGTCGCGCTAGTCGGTGCGGA TGTAGTAGTCGAAGAGGTCGAGGAACCAGGCGACGCCGGCGACGGGGACGATGATGGTGGAGCGCGTGGAGGACGTCTTCTCGGAGATCTTCAGGTACCTCCCCCTCGGGTTCTCCTTCAGATCGAAGTAGAACAGCTTGTGCTCGAACTGCAGCGTCTTGCTGACGAGCTCCACGTCGCCCCCAACGCCGCCTCCCCCTCCTCCTCCTCCCCCTCCCGCGACACCGGGCCCCGCCATGACGCCCCCGCCTCCTCCTCCTCCCCCGCCGCCGTCCATCGCCGCCGCCGCCGCCGCGAACTAGGGTTTTGAGCTAGGGTTTGGGTTTAAACTCGCTCTCAAACTCGAGTCGTCGAGTCGAGGAGAGGT                 ]
[-] EMBL OSS3995A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              aanATGCCT TTAAACCTTGA GAAACGG CTTTCTTG TCTCCCAAATATCGAAGTAGAACACCTTGTTGTCAAGGCGAAGCTCC TTGCTGAAGCCGTTGCGCTCGTCGGTGCGGA TGTAGTAGTCGAAGAGGTCGAGGAACCAGGCGACGCCGGCGACGGGGACGATGATGGTGGAGCGCGTGGAGGACGTCTTCTCGGAGATCTTCAGGTACCTCCCCCTCGGGTTCTCCTTCAGATCGAAGTAGAACAGCTTGTGCTCGAACTGCAGCGTCTTGCTGACGAGCTCCACGTCGCCCCCAACGCCGCCTCCCCCTCCTCCTCCTCCCCCTCCCGCGACACCGGGCCCCGCCATGACGCCCCCGCCTCCTCCTCCTCCCCCGCCGCCGTCCATCGCCGCCGCCGCCGCCGCGAACTAGGGTTTTGAGCTAGGGTTTGGGTTTAAACTCGCTCTCAAACT                                         ]
[-] EMBL AU078756             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCTTTGTTGAAGGCGTCGCGCTCGTCGGTGCGAA TGTAGTAGTCGAAGAGGTCGAGGAACCAAGCGANGCCGGCNACGGGGACGATGATGGTGGAGNGCGTGGAGGACGTCTTCTCGGAGATCTTCAGGTACCTCCCCCTCGGGTTCTCCTTCAGATCGAAGTAGAACAGCTTGTGCTCGAACTGCAGCGTCTTGCTGACGAGCTCCACGTCGCCCCCAACGCCGCCTCCCCCTCCTCCTCCTCCCCCTCCCGCGACACCGGGCCCCGCCATGACGCCCCCGCCTCCTCCTCCTCCCCCGCCGCCGTCCATCGCCGCCG CGCCGCCGCGAACTAGGGTTTTGAGCTAGGGTTTGGGTTT                                                          ]
[-] EMBL OSS3776A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGAAGCCATCGCGCTCGTCGGTGCGGA TGTAGTAGTCGAAGAGGTCGAGGAACCAGNCGACGCCGGCNACGGGGACGATGATGGTGGAGCGCGTGGAGGACGTCTTCTCGGAGATCTTCAGGTACCTCCCCCTCGGGTTCTCCTTCAGATCGAAGTAGAACAGCTTGTGCTCGAACTGCAGCGTCTTGCTNACGAGCTCCACGTCGCCCCNAACGCCGCCTCCCCCTCCTCCTCCTCCCCCTCCCGCGACACCGGGCCCCGCCATGACGCCCCCGCCTCCTCCTCCTCCCCCGACGCCGTCCATCGCCGCCGCCGCCGCCGCGAACTAGGGTTTTGAGCTAGGGTTTGGGTTTAAACTCGCTCTCAAACT                                         ]
[-] EMBL AU062848             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCGCTCGTCGGTNCGGATTGTAGTAGTCGAAGAGGTCGAGGAACCAAGCGACGCCGGCGACGGGGACGATGATGNTGNAGCGCGTGGAGGACGTCTTCTCGGAGATCTTCAGGTACCTCCCCCTCGGGTTCTCCTTCAGATCGAAGTAGAACAGCTTGTGCTCGAACTGCAGCGTCTTGCTGACGAGCTCCACGTCGCCCCCAACGCCGCCTCCCCCTCCTCCTCCTCCCCCTCCCGCGACACC GGCCCCGCCATGACGCCCCCGCCTCCTCCTCCTCCCCCGCCGCCGTCCATCGCCGCCG CGCCGCCGCGAACTAGGGTTTTGAGCTAGGGTTTGGGTTTAAACTCGCTCTCAAACTCGAGTCGTCGAGTCGAGGAGAGGTGGGGATGTGAGGTTGGG]


>consensus_13655#0 AACAACGCTAATCACCAGCTTATACCACCCCCCACGAACAATATACTGCTTATTATTCCT CGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAGAAAAAAAAGAAAGA AAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTGCACAGCCACA CACCACATAACAAACCTAGAGGAGGCATAACAGCAGTAACGGCCATGGTCGAGCACCTCA AAGCTAAATCATCTCTGACTGGACTCCACTGTGCGCACGTTCGCGCCCGTCATCCCTTCC AGCCTGTCCTTCATTATATCTACAAAGTGGCCAACCATTTCATGGAATTGCTTCAACCCG GAGAGTGGCAAGATTATCGACGAACGATCAGCTCCAGCAACCTCAGAAATCCTCAGGTAA TGACCCCTGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTTTGATCTGCCCTTATGACC TTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAGGCGTTCAACA TCTACCTCTGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCCAGCACCAACA TCATCAGAAAGTCCAGGAAGGCGCTCTGGAGGTTCCAAGTGTTGCTGATTAGGATGGTTT GGTAGAACATAAAGTCGGGAAGCCTCATTGTTTATTTCCAACAATACATTCCTGAATGCT TCCCAACCTTCTTCACCAGAACTACCAGCCGGAACAATGATTGTACTACGGTTTCTGTTG ACAGATGCCTCTGATACCTTGAGGAAGCGGCCTCTCTTGTTCTCCCCAATATCGAAGTAG AACACCTTGGTGTCGAGGCGGAGCTCCTTGCTGAAGGCGTCGCGCTCGTCGGTGCGGATG TAGTAGTCGAAGAGGTCGAGGAACCAGGCGACGCCGGCGACGGGGACGATGATGGTGGAG CGCGTGGAGGACGTCTTCTCGGAGATCTTCAGGTACCTCCCCCTCGGGTTCTCCTTCAGA TCGAAGTAGAACAGCTTGTGCTCGAACTGCAGCGTCTTGCTGACGAGCTCCACGTCGCCC CCAACGCCGCCTCCCCCTCCTCCTCCTCCCCCTCCCGCGACACCGGGCCCCGCCATGACG CCCCCGCCTCCTCCTCCTCCCCCGCCGCCGTCCATCGCCGCCGCCGCCGCCGCGAACTAG GGTTTTGAGCTAGGGTTTGGGTTTAAACTCGCTCTCAAACTCGAGTCGTCGAGTCGAGGA GAGGTGGGGATGTGAGGTTGGG



consensusID : consensus_13655#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 679
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCACCCCCCACGAACAATATACTGCTTATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAG-AAAAAAAAGAAAGAAAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTGCACAGCCACACACCACATAACAAA-CCTAGAGGAGGCATAACAGCAGTAACGGCCA-TGGTCGAGCACCTCAAAGCTAAATCATCTC-TGACTGGACTCCACTG-TGCGCACGTTCGCGCCCGTCATCCCTTCCAGCC-TGTCC-TTCATTATATCTACAAAGT-GGCCAACCATT-TCATGG-AATTGCTTCAACCC-GGAG-AGTGGCAAGATTATC-GACGAACGATCAGCTCCAGCAACCTCAGAAATCCTCAGGTAATGACCCC-TGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTT-TGATCTGCCCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAGGCGTTCAACATCTACCTC-TGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCCAGCACCAACATCATCAGAAAAGTCCAGGAAGGCGCNCTGGGAGGTTCCAAGTGTTGCTGATTNAGGATGGGTTGGTAGA]

[-] EMBL AU078770             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCACCCCCCACGAACAATATACTGCTTATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAG AAAAAAAAGAAAGAAAGAAAAAGGNGAAATAACATTATTATCCCCACCAATACTGCGTGATCTGCACAGCCACACACCACATAACAAA CCTAGAGGAGGCATAACAGCAGTAACGGCCA TGGTCGAGCACCTCAAAGCTAAATCATCTC TGACTGGACTCCACTG TGCGCACGTTCGCGCCCGTCATCCCTTCCAGCC TGTCC TTCATTATATCTACAAAGN GGCCAACCATT TCATGG AATTGCTTCAACCC GGAG AGTGGCAAGATTATC GGCGAACGATCAGCTCCAGNAACCTCAGAAATCCTCAGGTAATGACCCC TGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTT TGATCTGCCCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAGGCGTTCAACATCTACCTC TGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCCAGCACCAACATCATCAGAAAAGTCCAGGAAGGCGCNCTGGGAGGTTCCAAGTGTTGCTGATTNAGGATGGGTTGGTAGA]
[-] EMBL AU031311             [  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTATACCACCCCCCACGAACAATATACTGCTTATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAG AAAAAAAAGAAAGAAAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTGCACAGCCACACACCACATAACAAA CCTAGAGGAGGCATAACAGCAGTAACGGCCA TGGTCGAGCACCTCAAAGCTAAATCATCTC TGACTGGACTCCACTG TGCGCACGTTCGCGCCCGTCATCCCTTCCAGCC TGTCC TTCATTATATCTACAAAGT GGCCAACCATT TCATGG AATTGCTTCAACCCGGGAG AGTGGCAAGATTATC GACGAACGATCAGCTCCAGCA                                                                                                                                                                                                                                                                                 ]
[-] EMBL AU029606             [   TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCACCCCCCACGAACAATATACTGCTTATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAG AAAAAAAAGAAAGAAAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTGCACAGCCACACACCACATAACAAA CCTAGAGGAGGCATAACAGCAGTAACGGCCA TGGTCGAGCACCTCAAAGCTAAATCATCTC TGACTGGACTCCACTG TGCGCANGTTCGCGCCCGTCATCCCTTCCAGCC TGTCCTTTCA TATATCTACAAAGTGGGCCAACCA T TCATGG AATTGCTTCAACCC GGAG AGTGGCAAGATTATCGGACGAACGATCAGCTCCAGCAACCTCAGAAATCCTCAGGTAATGACCCC TGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTT TGATCTGNCCTTATGACCTTAGACATGCCCATGGCACTAAT                                                                                                                                                                       ]
[-] EMBL BQ908459             [                       TTTTTTTTTTACCA CCCCCACGAACAATATACTGCTTATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAGAAAAAAAAAGAAAGAAAGAAAAAAGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTGCACAGCCACACACCACATAACAAA CCTAGAGGAGGCATAACAGCAGTAACGGCCA TGGTCGAGCACCTCAAAGCTAAATCATCTCGTGACTGGACTCCACTGTTGCGCACGTTCGCGCCCGTCATCCCTTCCAGCCGTGTCC TTCATTATATCTACAAAGT GGCCAACCATTCTCATGGCAATTGCTTCAACCC GGAGAAGTGGCAAGATTATC GACGAACGATCAGCTCCAGCAACCTCAGAAATCCTCAGGTAATGACCCCGTGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTTGTGATCTGCCCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAGGCGTTCAACATCTACCTCGTGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCCAGCACCAACATCATCA                                                               ]
[-] EMBL BM038247             [                          TTTTTTTACCACCCCCAGCGAACAATATNGGGGTTATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAGAAAAAAAAAGAAAGAAAGAAAAAAGAGAAATAACATTATTATCCCCACCAATACTG GTGATCTG ACAG CACACACCACATAACAAAGNCTAGAGGAGGCATAACAGCAGTAACGGCCAGTGGTCGAGCACCTCAAAGCTAAATCATCTC TGACTGGACTCCACTG TGCGCACGTTCGCGCCCGTCATCCCTTCCAGCC TGTCC TTCATTATATCTACAAAGT GG CAACCATT TCATGG AA TGCTTCAACCC GGAG AGTGGCAAGATTATC GACGAACGATCAGCTCCAGCAA CTCAGAAATCCTCAGGTAATGACCCC TGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTT TGATCTG CCTTATGACCTTAGACATGCCCATGGCACTAATTTC                                                                                                                                                                    ]


>consensus_13655#1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCACCCCCCACGAACAATATACTGCT TATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAGAAAA AAAAGAAAGAAAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTG CACAGCCACACACCACATAACAAACCTAGAGGAGGCATAACAGCAGTAACGGCCATGGTC GAGCACCTCAAAGCTAAATCATCTCTGACTGGACTCCACTGTGCGCACGTTCGCGCCCGT CATCCCTTCCAGCCTGTCCTTCATTATATCTACAAAGTGGCCAACCATTTCATGGAATTG CTTCAACCCGGAGAGTGGCAAGATTATCGACGAACGATCAGCTCCAGCAACCTCAGAAAT CCTCAGGTAATGACCCCTGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTTTGATCTGC CCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAG GCGTTCAACATCTACCTCTGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCC AGCACCAACATCATCAGAAAAGTCCAGGAAGGCGCNCTGGGAGGTTCCAAGTGTTGCTGA TTNAGGATGGGTTGGTAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13655#0      ----------AACAACGCTAATCACCAGCTTATACCACCCCCCACGAACAATATACTGCT 50
consensus_13655#1      TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCACCCCCCACGAACAATATACTGCT 60
                                         *  *       ** ****************************

consensus_13655#0      TATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAGAAAA 110
consensus_13655#1      TATTATTCCTCGACAAGAAAAGTCCCAAACAAATCAATCCTCACCACTGAATTCAGAAAA 120
                       ************************************************************

consensus_13655#0      AAAAGAAAGAAAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTG 170
consensus_13655#1      AAAAGAAAGAAAGAAAAAGGAGAAATAACATTATTATCCCCACCAATACTGCGTGATCTG 180
                       ************************************************************

consensus_13655#0      CACAGCCACACACCACATAACAAACCTAGAGGAGGCATAACAGCAGTAACGGCCATGGTC 230
consensus_13655#1      CACAGCCACACACCACATAACAAACCTAGAGGAGGCATAACAGCAGTAACGGCCATGGTC 240
                       ************************************************************

consensus_13655#0      GAGCACCTCAAAGCTAAATCATCTCTGACTGGACTCCACTGTGCGCACGTTCGCGCCCGT 290
consensus_13655#1      GAGCACCTCAAAGCTAAATCATCTCTGACTGGACTCCACTGTGCGCACGTTCGCGCCCGT 300
                       ************************************************************

consensus_13655#0      CATCCCTTCCAGCCTGTCCTTCATTATATCTACAAAGTGGCCAACCATTTCATGGAATTG 350
consensus_13655#1      CATCCCTTCCAGCCTGTCCTTCATTATATCTACAAAGTGGCCAACCATTTCATGGAATTG 360
                       ************************************************************

consensus_13655#0      CTTCAACCCGGAGAGTGGCAAGATTATCGACGAACGATCAGCTCCAGCAACCTCAGAAAT 410
consensus_13655#1      CTTCAACCCGGAGAGTGGCAAGATTATCGACGAACGATCAGCTCCAGCAACCTCAGAAAT 420
                       ************************************************************

consensus_13655#0      CCTCAGGTAATGACCCCTGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTTTGATCTGC 470
consensus_13655#1      CCTCAGGTAATGACCCCTGTTGTTGCTTCCAAGGTCAAAGAAGAACCTCTTTTGATCTGC 480
                       ************************************************************

consensus_13655#0      CCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAG 530
consensus_13655#1      CCTTATGACCTTAGACATGCCCATGCCACTAATTTCTTCCTGAGGAGGCAAATCAACCAG 540
                       ************************************************************

consensus_13655#0      GCGTTCAACATCTACCTCTGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCC 590
consensus_13655#1      GCGTTCAACATCTACCTCTGGTCCAGAAGCAGATTGACTTCCATGTCCAGCTATAAATCC 600
                       ************************************************************

consensus_13655#0      AGCACCAACATCATCAGAAA-GTCCAGGAAGGCGCTCTGG-AGGTTCCAAGTGTTGCTGA 648
consensus_13655#1      AGCACCAACATCATCAGAAAAGTCCAGGAAGGCGCNCTGGGAGGTTCCAAGTGTTGCTGA 660
                       ******************** ************** **** *******************

consensus_13655#0      TTA-GGATGGTTTGGTAGAACATAAAGTCGGGAAGCCTCATTGTTTATTTCCAACAATAC 707
consensus_13655#1      TTNAGGATGGGTTGGTAGA----------------------------------------- 679
                       **  ****** ********                                         

consensus_13655#0      ATTCCTGAATGCTTCCCAACCTTCTTCACCAGAACTACCAGCCGGAACAATGATTGTACT 767
consensus_13655#1      ------------------------------------------------------------
                                                                                   

consensus_13655#0      ACGGTTTCTGTTGACAGATGCCTCTGATACCTTGAGGAAGCGGCCTCTCTTGTTCTCCCC 827
consensus_13655#1      ------------------------------------------------------------
                                                                                   

consensus_13655#0      AATATCGAAGTAGAACACCTTGGTGTCGAGGCGGAGCTCCTTGCTGAAGGCGTCGCGCTC 887
consensus_13655#1      ------------------------------------------------------------
                                                                                   

consensus_13655#0      GTCGGTGCGGATGTAGTAGTCGAAGAGGTCGAGGAACCAGGCGACGCCGGCGACGGGGAC 947
consensus_13655#1      ------------------------------------------------------------
                                                                                   

consensus_13655#0      GATGATGGTGGAGCGCGTGGAGGACGTCTTCTCGGAGATCTTCAGGTACCTCCCCCTCGG 1007
consensus_13655#1      ------------------------------------------------------------
                                                                                   

consensus_13655#0      GTTCTCCTTCAGATCGAAGTAGAACAGCTTGTGCTCGAACTGCAGCGTCTTGCTGACGAG 1067
consensus_13655#1      ------------------------------------------------------------
                                                                                   

consensus_13655#0      CTCCACGTCGCCCCCAACGCCGCCTCCCCCTCCTCCTCCTCCCCCTCCCGCGACACCGGG 1127
consensus_13655#1      ------------------------------------------------------------
                                                                                   

consensus_13655#0      CCCCGCCATGACGCCCCCGCCTCCTCCTCCTCCCCCGCCGCCGTCCATCGCCGCCGCCGC 1187
consensus_13655#1      ------------------------------------------------------------
                                                                                   

consensus_13655#0      CGCCGCGAACTAGGGTTTTGAGCTAGGGTTTGGGTTTAAACTCGCTCTCAAACTCGAGTC 1247
consensus_13655#1      ------------------------------------------------------------
                                                                                   

consensus_13655#0      GTCGAGTCGAGGAGAGGTGGGGATGTGAGGTTGGG 1282
consensus_13655#1      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)