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Oryza sativa
cluster # 13657 cluster # 13657       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13657#0 length = 1276 sequences # 12  
consensus_13657#1 length = 665 sequences # 1  

consensusID : consensus_13657#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1276
fasta sequence
                              [CTCTTCCATTGATTCCCTGCAGGGCTCCACTCCCCTTCTTCTCCCTTTGTGCGCGCCACCAACGGGGGTGGTGGTGGGAAGAGAATTCGGATCGCATCGAGCTCGAGCTGCTTCGCGAATCGAACATATGATATGGCTGGTGTGATCAGCGCCCGTGCTGGTCTGAGCCATTCCTTGTCTGTTACTCAGACAGTTCCGAATCGTCCGCTGCAGGCTTCACAATTGGCAACGAGGTGTACAAGCCCATCATTTCTTTCTGCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGTAGCAGCTATGGAGGTCTCGAAGGAAGCCCCTTCTGCTGACTTTGCCAATCGCCAGCCTTCCAAAGGGGTTCTTGAGACATGGTGCAATGCCGATGCAGTGTGTTTTGATGTTGATAGCACGGTCTGCTTGGATGAGGGTATTGATGAACTCGCTGATTT-CTGT-GGGGCTGGGAAGGCTGTTGCTG-AGTGGACTGCAAAGGCAATGACAGGAACTGTTCCATTTGAGGAGGCACTAGCTGCCAGGCTATCGTTAATTAAGCCATATCTGT-CCCAAGTTGATGACTGTTTAGTGAAGAGGCCTCCAAGGATTTCTCCTGG-AATTGCTGACTTGATTAAGAAGCTCAAAGCAAATAATACTGATGTATTCCTTGTGTCAGGAGGTTTT-CGACAAATGATCAAGCCTGTGGCATCTGAGCTTGGCATT-CCTCCTGAAAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTATGCTGGATTTGATCCCACTGAACCCACTTCACGAAGTGGGGGTAAAGCACTAGCAGTCCAACAAATTAGACAGAACCATGGTTATAAGACACTTGTTATGATTGGAGATGGTGCAACTGATCTTGAGGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCATAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATTGTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAAAAAAATGTATTTTATTTTTTAATTTTCATCTTTCCTCAACCTTACCTCCTTTTTAAATGATCCTGAGGCTCCTAAACTTGATTCCTATGCACTGAATATTGTGAATAAATTGTCTCATAAGCAATTGCTTGAGACTGCCAGAGTTAAAAAA]

[+] EMBL AK072665             [CTCTTCCATTGATTCCCTGCAGGGCTCCACTCCCCTTCTTCTCCCTTTGTGCGCGCCACCAACGGGGGTGGTGGTGGGAAGAGAATTCGGATCGCATCGAGCTCGAGCTGCTTCGCGAATCGAACATATGATATGGCTGGTGTGATCAGCGCCCGTGCTGGTCTGAGCCATTCCTTGTCTGTTACTCAGACAGTTCCGAATCGTCCGCTGCAGGCTTCACAATTGGCAACGAGGTGTACAAGCCCATCATTTCTTTCTGCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGTAGCAGCTATGGAGGTCTCGAAGGAAGCCCCTTCTGCTGACTTTGCCAATCGCCAGCCTTCCAAAGGGGTTCTTGAGACATGGTGCAATGCCGATGCAGTGTGTTTTGATGTTGATAGCACGGTCTGCTTGGATGAGGGTATTGATGAACTCGCTGATTT CTGT GGGGCTGGGAAGGCTGTTGCTG AGTGGACTGCAAAGGCAATGACAGGAACTGTTCCATTTGAGGAGGCACTAGCTGCCAGGCTATCGTTAATTAAGCCATATCTGT CCCAAGTTGATGACTGTTTAGTGAAGAGGCCTCCAAGGATTTCTCCTGG AATTGCTGACTTGATTAAGAAGCTCAAAGCAAATAATACTGATGTATTCCTTGTGTCAGGAGGTTTT CGACAAATGATCAAGCCTGTGGCATCTGAGCTTGGCATT CCTCCTGAAAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTATGCTGGATTTGATCCCACTGAACCCACTTCACGAAGTGGGGGTAAAGCACTAGCAGTCCAACAAATTAGACAGAACCATGGTTATAAGACACTTGTTATGATTGGAGATGGTGCAACTGATCTTGAGGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCATAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATTGTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAATTGTATGTATTTTATTTTTTAATTTTCATCTTTCCTCAACCTTACCTCCTTTTTAAATGATCCTGAGGCTCCTAAACTTGATTCCTATGCACTGAATATTGTGAATAAATTGTCTCATAAGCAATTGCTTGAGACTGCC            ]
[+] EMBL CF328846             [                                    TCTTCTCCCTTTGTGCGCGCCACCAACGGGGGTGGTGGTGGGAAGAGAATTCGGATCGCATCGAGCTCGAGCTGCTTCGCGAATCGAACATATGATATGGCTGGTGTGATCAGCGCCCGTGCTGGTCTGAGCCATTCCTTGTCTGTTACTCAGACAGTTCCGAATCGTCCGCTGCAGGCTTCACAATTGGCAACGAGGTGTACAAGCCCATCATTTCTTTCTGCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGTAGCAGCTATGGAGGTCTCGAAGGAAGCCCCTTCTGCTGACTTTGCCAATCGCCAGCCTTCCAAAGGGGTTCTTGAGACATGGTGCAATGCCGATGCAGTGTGTTTTGATGTTGATAGCACGGTCTGCTTGGATGAGGGTATTGATGAACTCGCTGATTT CTGT GGGGCTGGGAAGGCTGTTGCTG AGTGGACTGCAAAGGCAATGACAGGAACTGTTCCATTTGAGGAGGCACTAGCTGCCAGGCTATCGTTAATTAAGCCATATCTGT CCCAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSC103431            [                                                 tcCGCGCCACCAACGGGGGTGGNGGTGGGAAGAGAATTCGNATCGCATCGAGCTCGAGCTGCTTCGCGAATCGAACATATGATATGGCTGGTGTGATCAGCGCCCGTGCTGGTCTGAGCCATTCCTTGTCTGTTACTCAGACAGTTCCGAATCGTCCGCTGCAGGCTTCACAATTGGCAACGAGGTGTACAAGCCCATCATTTCTTTCTGCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGTAGCAGCTATGGAGGTCTCGAAGGAAGCCCCTTCTGCTGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF324857             [                                                         ACCAACGGGGGTGGTGGTGGGAAGAGAATTCGGATCGCATCGAGCTCGAGCTGCTTCGCGAATCGAACATATGATATGGCTGGTGTGATCAGCGCCCGTGCTGGTCTGAGCCATTCCTTGTCTGTTACTCAGACAGTTCCGAATCGTCCGCTGCAGGCTTCACAATTGGCAACGAGGTGTACAAGCCCATCATTTCTTTCTGCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGTAGCAGCTATGGAGGTCTCGAAGGAAGCCCCTTCTGCTGACTTTGCCAATCGCCAGCCTTCCAAAGGGGTTCTTGAGACATGGTGCAATGCCGATGCAGTGTGTTTTGATGTTGATAGCACGGTCTGCTTGGATGAAGGTATTGATGAACTCGCTGATTT CTGT GGGGCTGGGAAGGCTGTTGCTG AG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSC102921            [                                                               GGGGGTGGTGGTGGGAAGAGAATTCGGATCGCATCGAGCTCGAGCTGCTTCGCGAATCGAACATATGATATGGCTGGTGTGATCAGCGCCCGTGCTGGTCTGAGCCATTCCTTGTCTGTTACTCAGACAGTTCCGAATCGTCCGCTGCAGGCTTCACAATTGGCAACGAGGTGTACAAGCCCATCATTTCTTTCTGCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGTAGCAGCTATGGAGGTCTCGAAGGAAGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU068294             [                                                                                      TCGGATCGCATCGAGCTCGAGCTGCTTCGCGAATCGAACATATGATATGGCTGGTGTGATCAGCGCCCGTGCTGGTCTGAGCCATTCCTTGTCTGTTACTCAGACAGTTCCGAATCGTCCGCTGCAGGCTTCACAATTGGCAACGAGGTGTACAAGCCCATCATTTCTTTCTGCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGTAGCAGCTATGGAGGTCTCGAAGGAAGCCCCTTCTGCTGACTTTGCCAATCGCCAGCCTTCCAAAGGGGTTCTTGAGACATGGTGCAATGCCGATGCAGTGTGTTTTGATGTTGATAGCACGGTCTGCTTGGATGAGGGTATTGATGAACTCGCTGATTT CTGT GGGGCTGGGAAGGCTGTTGCTG AGTGGACTGCAAAGGCAATGACAGGAACTGTTCCATTTGAGGAGGCACTAGCTGCCAGGCTATCGTTAATTAAGCCATATCTGTCCCCAAGTTGATGACTGTTTAGTGAAagaang                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA305629             [                                                                                                                                                                                                                                                                  GCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGCAGCAGCTATGGAGGTCTCGAAGGAAGCCCCTTCTGCTGACTTTGCCAATCGCCAGCCTTCCAAAGGGGTTCTTGAGACATGGTGCAATGCCGATGCAGTGTGTTTTGATGTTGATAGCACGGTCTGCTTGGATGAGGGTATTGATGANTTCGCTGATTT CTGT GGGGCTGGGAAGGCTGTTGCTG AGTGGACTGCAAAGGCAATGACAGGAACTGTTCCATTTGAGGAGGCACTAGCTGCCAGGCTATCGTTAATTAAGCCATCTCTGT CCCAAGTTGATGACTGTTTAGTGAAGAGGCCTCCAAGGATTTCTCCTGGNNATTGCTGACTTGATTAAGAAGCTCAAAGCAAATAATACTGATGTATTCCTTGTGTCAGGAGGTTTT CGACAAATGATCAAGCCTGTGGCATCTGAGCTCGGCATT CCTCCTGAAAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTANNCTGGATTTGATCCCACTGAACCCACTTCACGAAGTGGGGGTAAAGCACTAGCAGTCCAACAAATTAGACAGAACCATGGTTATAAGACACTTGTTATGATTGGANTTGGTGCAACTGATCTTG                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU092040             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       AACCCGCTGATTTCCTGTGGGGGCTGGAAAGGCTTTTGCTGAAGTGGACTGCAAAGGCAATGACAGGAACTGTTCCATTTGAGGAGGCACTAGCTGCCAGGCTATCGTTAATTAAGCCATATCTGT CCCAAGTTGATGACTGTTTAGTGAAGAGGCCTCCAAGGATTTCTCCTGG AATTGCTGACTTGATTAAGAAGCTCAAAGCAAATAATACTGATGTATTCCTTGTGTCAGGAGGTTTT CGACAAATGATCAAGCCTGTGGCATCTGAGCTTGGCATT CCTCCTGAAAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTATGCTGGATTTGATCCCACTGAACCCACTTCACGAAGTGGGGGTAAAGCACTAGCAGTCCAACAAATTAGACAGAACCATGGTTATAAGACACTTGTTATGATTGGAGATGGTGCAACTGATCTTGAGGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCATAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATTGTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAAAAAAAa                                                                                                                                                 ]
[-] EMBL CF328847             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TAGCTGCCAGGCTATCGTTAATTAAGCCATATCTGT CCCAAGTTGATGACTGTTTAGT AAGAGGCCTCCAAGGATTTCTCCTGG AATTGCTGACTTGATTAAGAAGCTCAAAGCAAATAATACTGATGTATTCCTTGTGTCAGGAGGTTTT CGACAAATGATCAAGCCTGTGGCATCTGAGCTTGGCATT CCTCCTGAAAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTATGCTGGATTTGATCCCACTGAACCCACTTCACGAAGTGGGGGTAAAGCACTAGCAGTCCAACAAATTAGACAGAACCATGGTTATAAGACACTTGTTATGATTGGAGATGGTGCAACTGATCTTGAGGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCATAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATTGTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAAAAAAA                                                                                                                                                  ]
[+] EMBL AU092056             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCAGGAGGTTTTCCGACAAATGATCAAGCCTGTGGCATCTGAGCTTGGCATT CCTCNTGAAAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTATGCTGGATTTGATCCCACTGAACCCACTTCACGAAGTGGGGGTAAAGCACTAGCAGTCCAACAAATTAGACAGAACCATGGTTATAAGACACTTGTTATGATTGGAGATGGTGCAACTGATCTTGAGGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCATAATTTAGTNCCACACTGNAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATTGTAGATGTCATTGAAGCATTACAATTNNGATGCGTGATTATTTAAAAAAAa                                                                                                                                                 ]
[-] EMBL CF321135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TT CGACAAATGATCAAGCCTGTGGCATCTGAGCTTGGCATT CCTCCTGAAAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTATGCTGGGTTTGATCCCACTGAACCCACTTCACGAAGTGGGGGTAAAGCACTAGCAGTCCAACAAATTAGACAGAACCATGGTTATAAGACACTTGTTATGATTGGAGATGGTGCAACTGATCTTGAGGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCATAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATTGTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAATTGTATGTATTTTATTTTTTAATTTTCATCTTTCCTCAACCTTACCTCCTTTTTAAATGATCCTGAGGCTCCTAAACTTGATTCCTATGCACTGAATATTGTGAATAAATTGTCTCATAAGCAATTGCTTGAGACTGCCAGAGTTAAAAAA]
[+] EMBL OS38110              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gcaATTACCTCCTGACAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTATGCTGGATTTGATCCCACTGAACCCACTTCACGAAG GGGGGTAAAGCACTAGCAGTCCAACAAATTAGACAGAACCATGGTTATAAGACACTTGTTATGATTGGAGATGGTGC ACTGATCTTGAGGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACG                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_13657#0 CTCTTCCATTGATTCCCTGCAGGGCTCCACTCCCCTTCTTCTCCCTTTGTGCGCGCCACC AACGGGGGTGGTGGTGGGAAGAGAATTCGGATCGCATCGAGCTCGAGCTGCTTCGCGAAT CGAACATATGATATGGCTGGTGTGATCAGCGCCCGTGCTGGTCTGAGCCATTCCTTGTCT GTTACTCAGACAGTTCCGAATCGTCCGCTGCAGGCTTCACAATTGGCAACGAGGTGTACA AGCCCATCATTTCTTTCTGCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGTAGCAGCT ATGGAGGTCTCGAAGGAAGCCCCTTCTGCTGACTTTGCCAATCGCCAGCCTTCCAAAGGG GTTCTTGAGACATGGTGCAATGCCGATGCAGTGTGTTTTGATGTTGATAGCACGGTCTGC TTGGATGAGGGTATTGATGAACTCGCTGATTTCTGTGGGGCTGGGAAGGCTGTTGCTGAG TGGACTGCAAAGGCAATGACAGGAACTGTTCCATTTGAGGAGGCACTAGCTGCCAGGCTA TCGTTAATTAAGCCATATCTGTCCCAAGTTGATGACTGTTTAGTGAAGAGGCCTCCAAGG ATTTCTCCTGGAATTGCTGACTTGATTAAGAAGCTCAAAGCAAATAATACTGATGTATTC CTTGTGTCAGGAGGTTTTCGACAAATGATCAAGCCTGTGGCATCTGAGCTTGGCATTCCT CCTGAAAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTATGCTGGATTT GATCCCACTGAACCCACTTCACGAAGTGGGGGTAAAGCACTAGCAGTCCAACAAATTAGA CAGAACCATGGTTATAAGACACTTGTTATGATTGGAGATGGTGCAACTGATCTTGAGGCT CGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCA GTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCA TAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATT GTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAAAAAAATGTATTTTAT TTTTTAATTTTCATCTTTCCTCAACCTTACCTCCTTTTTAAATGATCCTGAGGCTCCTAA ACTTGATTCCTATGCACTGAATATTGTGAATAAATTGTCTCATAAGCAATTGCTTGAGAC TGCCAGAGTTAAAAAA



consensusID : consensus_13657#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence
                              [AATCCCATAAAGCCAGTGAGTAGTGCTGCTTGAGGGAAAAGGTTCAAGTCATTGACATGTGATACAGTGATAGTTATTTCTTCTGTCAATATTTCAGTTAGGGTAAAGTTTGGGAATGGCACTTCTATGGCTATGTGGTATATTAATATTGACCTAACCCGTGAATTCGCCTGCAGTAGTTTGGCTTTCTAATAGAAGAAATGAGCTGTCTTTATAGATGACATTGAACAAAATGTGTCTATCTAGTAATATCTTCATTTATTTACTTGTCTCTTGCAGGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCATAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATTGTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAATTGTATGTATTTTATTTTTTAATTTTCATCTTTCCTCAACCTTACCTCCTTTTTAAATGATCCTGAGGCTCCTAAACTTGATTCCTATGCACTGAATATTGTGAATAAATTGTCTCATAAGCAATTGCTTGAGACTGCCAGAGTTAAAAAAAAAAAAA]

[+] EMBL AU068295             [AATCCCATAAAGCCAGTGAGTAGTGCTGCTTGAGGGAAAAGGTTCAAGTCATTGACATGTGATACAGTGATAGTTATTTCTTCTGTCAATATTTCAGTTAGGGTAAAGTTTGGGAATGGCACTTCTATGGCTATGTGGTATATTAATATTGACCTAACCCGTGAATTCGCCTGCAGTAGTTTGGCTTTCTAATAGAAGAAATGAGCTGTCTTTATAGATGACATTGAACAAAATGTGTCTATCTAGTAATATCTTCATTTATTTACTTGTCTCTTGCAGGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCATAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATTGTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAATTGTATGTATTTTATTTTTTAATTTTCATCTTTCCTCAACCTTACCTCCTTTTTAAATGATCCTGAGGCTCCTAAACTTGATTCCTATGCACTGAATATTGTGAATAAATTGTCTCATAAGCAATTGCTTGAGACTGCCAGAGTTAAAAAAAAAAAAA]


>consensus_13657#1 AATCCCATAAAGCCAGTGAGTAGTGCTGCTTGAGGGAAAAGGTTCAAGTCATTGACATGT GATACAGTGATAGTTATTTCTTCTGTCAATATTTCAGTTAGGGTAAAGTTTGGGAATGGC ACTTCTATGGCTATGTGGTATATTAATATTGACCTAACCCGTGAATTCGCCTGCAGTAGT TTGGCTTTCTAATAGAAGAAATGAGCTGTCTTTATAGATGACATTGAACAAAATGTGTCT ATCTAGTAATATCTTCATTTATTTACTTGTCTCTTGCAGGCTCGGCAGCCTGGAGGAGCA GACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGAAGCAGTTGCAGCAAAAGCAGAT TGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATTGCCATAATTTAGTACCACACTG CAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGTAATTGTAGATGTCATTGAAGCA TTACAATTTTGATGCGTGATTATTTAATTGTATGTATTTTATTTTTTAATTTTCATCTTT CCTCAACCTTACCTCCTTTTTAAATGATCCTGAGGCTCCTAAACTTGATTCCTATGCACT GAATATTGTGAATAAATTGTCTCATAAGCAATTGCTTGAGACTGCCAGAGTTAAAAAAAA AAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13657#0      CTCTTCCATTGATTCCCTGCAGGGCTCCACTCCCCTTCTTCTCCCTTTGTGCGCGCCACC 60
consensus_13657#1      ------------------------------------------------------------
                                                                                   

consensus_13657#0      AACGGGGGTGGTGGTGGGAAGAGAATTCGGATCGCATCGAGCTCGAGCTGCTTCGCGAAT 120
consensus_13657#1      ------------------------------------------------------------
                                                                                   

consensus_13657#0      CGAACATATGATATGGCTGGTGTGATCAGCGCCCGTGCTGGTCTGAGCCATTCCTTGTCT 180
consensus_13657#1      ------------------------------------------------------------
                                                                                   

consensus_13657#0      GTTACTCAGACAGTTCCGAATCGTCCGCTGCAGGCTTCACAATTGGCAACGAGGTGTACA 240
consensus_13657#1      ------------------------------------------------------------
                                                                                   

consensus_13657#0      AGCCCATCATTTCTTTCTGCTAAACTTTGCAAGACTCGTCCCCTGGTAGTAGTAGCAGCT 300
consensus_13657#1      ------------------------------------------------------------
                                                                                   

consensus_13657#0      ATGGAGGTCTCGAAGGAAGCCCCTTCTGCTGACTTTGCCAATCGCCAGCCTTCCAAAGGG 360
consensus_13657#1      ------------------------------------------------------------
                                                                                   

consensus_13657#0      GTTCTTGAGACATGGTGCAATGCCGATGCAGTGTGTTTTGATGTTGATAGCACGGTCTGC 420
consensus_13657#1      ------------------------------------------------------------
                                                                                   

consensus_13657#0      TTGGATGAGGGTATTGATGAACTCGCTGATTTCTGTGGGGCTGGGAAGGCTGTTGCTGAG 480
consensus_13657#1      ------------------------------------------------------------
                                                                                   

consensus_13657#0      TGGACTGCAAAGGCAATGACAGGAACTGTTCCATTTGAGGAGGCACTAGCTGCCAGGCTA 540
consensus_13657#1      ------------------------------------------------------------
                                                                                   

consensus_13657#0      TCGTTAATTAAGCCATATCTGTCCCAAGTTGATGACTGTTTAGTGAAGAGGCCTCCAAGG 600
consensus_13657#1      ---------------------------------------------------AATCCCATA 9
                                                                            *** *  

consensus_13657#0      ATTTCTCCTGGAATTGCTGACTTGATTAAGAAGCTCAAAGCAAATAATAC-TGATGTATT 659
consensus_13657#1      AAGCCAGTGAGTAGTGCTG-CTTGAGGGAAAAGGTTCAAGTCATTGACATGTGATACAGT 68
                       *   *     * * ***** *****   * *** *  ***  * * * *  ****  * *

consensus_13657#0      CCTTGTGTCAGGAGGTTTTCGACAAATGATCAAGCCTG--TGGCATCTGAGCTTGGCATT 717
consensus_13657#1      GATAGTT-----ATTTCTTCTGTCAATATTTCAGTTAGGGTAAAGTTTGGGAATGGCACT 123
                         * **      *  * ***    ***  *  **   *  *    * ** *  ***** *

consensus_13657#0      CCTCCTGAAAACATCATTGCAAACCAACTTCTTTTTGGAACATCTGGAGAGTATGCTGGA 777
consensus_13657#1      TCT----ATGGCTATGTGGTATATTAA-----TATTGACCTAACCCG---------TGAA 165
                        **    *   *    * * * *  **     * ***    * *  *         ** *

consensus_13657#0      TTTGATCCCACTGAACCCACTTCACGAAGTGGGGGTAAAGCACTAGCAGTCCAACAAATT 837
consensus_13657#1      TTCGCCTGCAGTAGTTTGGCTTTCTAATAGAAGAAATGAGCTGTCTTTATAGATGACATT 225
                       ** *    ** *       ***    *     *     ***  *     *  *  * ***

consensus_13657#0      AGACAGAACCATGGTTATAAGACACTTGTTATGATTGGAGATGGTGCAACTGATCTTG-A 896
consensus_13657#1      GAACAAAAT-GTGTCTAT------CTAGTAATATCTTCATTTATTTACTTGTCTCTTGCA 278
                         *** **   **  ***      ** ** **   *  *  *  *        ***** *

consensus_13657#0      GGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGA 956
consensus_13657#1      GGCTCGGCAGCCTGGAGGAGCAGACTTGTTCATCTGTTACGCAGGTGTCCAGATGAGAGA 338
                       ************************************************************

consensus_13657#0      AGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATT 1016
consensus_13657#1      AGCAGTTGCAGCAAAAGCAGATTGGGTTGTCATCGATTTTCAAGAACTAATTTCAGAATT 398
                       ************************************************************

consensus_13657#0      GCCATAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGT 1076
consensus_13657#1      GCCATAATTTAGTACCACACTGCAATCCTAACTTTTGCATTGTTGCTAATGAGTGCATGT 458
                       ************************************************************

consensus_13657#0      AATTGTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAAAAAAATGTATT 1136
consensus_13657#1      AATTGTAGATGTCATTGAAGCATTACAATTTTGATGCGTGATTATTTAATTGTATGTATT 518
                       *************************************************    *******

consensus_13657#0      TTATTTTTTAATTTTCATCTTTCCTCAACCTTACCTCCTTTTTAAATGATCCTGAGGCTC 1196
consensus_13657#1      TTATTTTTTAATTTTCATCTTTCCTCAACCTTACCTCCTTTTTAAATGATCCTGAGGCTC 578
                       ************************************************************

consensus_13657#0      CTAAACTTGATTCCTATGCACTGAATATTGTGAATAAATTGTCTCATAAGCAATTGCTTG 1256
consensus_13657#1      CTAAACTTGATTCCTATGCACTGAATATTGTGAATAAATTGTCTCATAAGCAATTGCTTG 638
                       ************************************************************

consensus_13657#0      AGACTGCCAGAGTTAAAAAA------- 1276
consensus_13657#1      AGACTGCCAGAGTTAAAAAAAAAAAAA 665
                       ********************       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)