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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13658#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2122 fasta sequence
[CCCACTCGCTGTGGACTCGTCGTCTTCCTCCCGCCGCCGCCGCCTAGGGTTTCGCGCTGAGAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTT---GGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGCTAGTGTGCTCCACATGTCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGAACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAATAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTCCCAGGAGTAAT-----GGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACC-CCTATTGATTTATGATATATGCAATTTATGCAAAAAAAAAGAAAAAGA]
[+] EMBL AK067785 [CCCACTCGCTGTGGACTCGTCGTCTTCCTCCCGCCGCCGCCGCCTAGGGTTTCGCGCTGAGAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTTGCAGGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGCTAGTGTGCTCCACATGTCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGAACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAATAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTCCCAGGAGTAAT GGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACC CCTATTGATTTATGATATATGCAAT ]
[+] EMBL CB671462 [ GTTTCCCTTTGAGAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTT GGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCATGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGC ]
[+] EMBL CB671464 [ GTTTCGCGCTGAGAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCGGCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTT GGAGCTACTTCAGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCATGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCA ]
[+] EMBL CB628065 [ TGCTCCTCTACTACAAGTACGCCGAGGTGCCCGACGCCGCGGCGCTCGCTGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCATCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACGCTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGCGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGCCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTTGCAGGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGAGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACACTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCCTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACAGGAGGTATACGGTGTGAGATGGCATCGGCTTATATCCGCTCGAAAGGTGAAGGCTTTGAGAATGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTG ]
[+] EMBL CB653865 [ GTCGGCCGCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGGAGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGGCCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCTCCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGCAGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTGTT GGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGGATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGT ]
[+] EMBL CF306977 [ CTCGCTCTCCGTTCGGCTCGTGAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGCTGGCAACCCCGCAAATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTGCAAAGTGTT GGAGCTACTTCGGACTCTGAAACAACCGCGGAGAGGAGTGAAGTGGTTGTCTTGGATGCGCGAAATGTCTACAAGACACGGATTGGCAAGTTCCGTGCACCGAACGTGGAGACGCTGGATCCATAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACCGTGTGAGATGGCATCGGCATATATCCGCTCGAAAGGTGAACGCTTTGAGAACGTATTTCAGCTGTATGGTGGCATTCAGAGATATCTGGAGCGATTCCCACATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGA ]
[+] EMBL CB642111 [ GAAGCTCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCAGCATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTCAGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTGACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTGGTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGCTAGTGTGCTCCACATGTCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGAACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAATAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTCCCAGGAGTAATGGTAAGGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGC ]
[-] EMBL CB671465 [ GCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACC CCTATTGATTTATGATATATGCAATTTATGCAAAAAAAAGGA ]
[-] EMBL CB671463 [ TGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACCGCCTATTGATTTATGATATATGCAATTTATGCAAAAAAAAAGA ]
[-] EMBL CB653866 [ TGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGCTGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACC CCTATGGATTTATGATATATGCAATTTATGCAAAAAAAAAAAAAAAGA]
[-] EMBL CF324675 [ TGAGCATGACTGGAAGATTGCAGATGCACCATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTAaaa ]
[-] EMBL CF324819 [ CAACAAACTGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCNCAGGGCGCAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCAGGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGCCAATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCATGACAGGCAGATAGCAAACAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGTTATTGAGCATGATATGGGCCATATAATTCCTACTCGGCCGCCCTTTATTGATAAAATAAAAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTAAGTTAACTTATGACCCCTCTTTTGAT ]
consensusID : consensus_13658#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 873 fasta sequence
[CCTCTGTTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACACGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCGTCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGATCCTCTTCAGTATCAGCAACAAACCGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGGTTCTCCCCAGGCGCAGCAATGGGAGCCTTGTTCTGCAGACAGCAGCAGAAGACATGGGGGTCCCTCAAATTAAGGGTGGGGAATTCTGGTCTGGGGTTTCCCCCCCATCATTAATGAATTTGACCGGGAGCCCAATTAAACCCCCTTCCCTTTATTGCTTTGGGGACTCTTAAGAATATTGACGGGCGGATAGCAAAACGGGGGAGGCCCGCAACCTCCGAATTAATTTGTTAAGAAATGTCGCTCTCTGTATTGGGGCATGAATTGGGCCCCATAAATTCTACTCCGGCGGCCCCTTTTTGATAAATAAAAAAGAATCTGTGCCACTTTTTTGAAAAAGGGTGGGAAAAAAGGAAAAGCTCTTGTTGGGAAGTTAACTATTAACCCCCTTTTGAGGATTAATATGGTTGGGATTGGTTCTTTTCTATAAAACAAAAACGGGGCGGNGGGGGGGGCCGGGGCCCCCNNNCCCCCTTCGTGNGGGGGTTTCTCCGCGCCCCCTGGCG]
[+] EMBL CA757764 [CCTCTGTTTGCATGGTTTCCGTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACATTGCCGATCTTGTCTTTATAGATGCTCCACACGAGCTTTCGTTTGTGTACAAACCAAATCCAGATCACTGCTCTGGCAGATCTTCACTGCCGTCTGGCACACCAAAGAGAAAATACGCATGGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCACCATTCGATCCTCTTCAGTATCAGCAACAAACCGATGGATTCGAGGAATCATACGCATACCTTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGGTTCTCCCCAGGCGCAGCAATGGGAGCCTTGTTCTGCAGACAGCAGCAGAAGACATGGGGGTCCCTCAAATTAAGGGTGGGGAATTCTGGTCTGGGGTTTCCCCCCCATCATTAATGAATTTGACCGGGAGCCCAATTAAACCCCCTTCCCTTTATTGCTTTGGGGACTCTTAAGAATATTGACGGGCGGATAGCAAAACGGGGGAGGCCCGCAACCTCCGAATTAATTTGTTAAGAAATGTCGCTCTCTGTATTGGGGCATGAATTGGGCCCCATAAATTCTACTCCGGCGGCCCCTTTTTGATAAATAAAAAAGAATCTGTGCCACTTTTTTGAAAAAGGGTGGGAAAAAAGGAAAAGCTCTTGTTGGGAAGTTAACTATTAACCCCCTTTTGAGGATTAATATGGTTGGGATTGGTTCTTTTCTATAAAACAAAAACGGGGCGGNGGGGGGGGCCGGGGCCCCCNNNCCCCCTTCGTGNGGGGGTTTCTCCGCGCCCCCTGGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13658#0 CCCACTCGCTGTGGACTCGTCGTCTTCCTCCCGCCGCCGCCGCCTAGGGTTTCGCGCTGA 60
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 GAGCCATGGACGCGGCGGCGCCGCCGCCGCGGGGGCAGGAGGGGCAAGGAGATCGCAGCG 120
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 GCGGCGATGAGGGCGGGAGATACGGGGTGCTCCTCTACTACAAGTACGCCGAGGTGCCCG 180
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 ACGCCGCGGCGCTCGCCGCCTTCTACGAGTCCCACTGCCGCGCTCTCGCCCTCGTCGGCC 240
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 GCGTCCGCGTCGGCCCCGACGGCGTCAACGCCACACTCGGGGGGAGGATGGCGGCGCTGG 300
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 AGAAGCACGTCGCCGAGATGAGCTCCAACGCCTTGTTCGACGGCACCGACTTCAAGCTGG 360
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 CCTCCTGCGACGACCCCGTCGACGAGCGGGTCGCCAGGGAGTGCGGCTTCACCTCGCTCT 420
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 CCGTTCGGCTCGTCAAGGAGCTGGTAACGCTTTGTGCAAACCCGTCGTTGGCAACCCCGC 480
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 AGATTACATGCGCCGGGAGGCATTTGTCGGCTGCGGAGTTCCATTCGGTACTCCAAAGTG 540
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 TTGGAGCTACTTCGGACTCTGAAGCAACCGTGGAGAAGAGTGAAGTGGTTGTCTTGGATG 600
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 CGCGAAATGTCTACGAGACACGGATTGGCAAGTTCCGTGTACCGAACGTGGAGACGCTGG 660
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 ATCCAGAAATCAGGCAGTACAGTGACCTGCCGTTGTGGATAGATGAGCATGCTGAGAAGC 720
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 TCCGCGGCAAATCAATTATGATGTACTGCACTGGAGGTATACGGTGTGAGATGGCATCGG 780
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 CATATATCCGCTCGAAAGGTGAAGGCTTTGAGAACGTATTTCAGCTATATGGTGGCATTC 840
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 AGAGATATCTGGAGCGATTCCCAGATGGTGGCTATTTTGAAGGGAAGAATTTTGTATTTG 900
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 ACCATAGGATTTCAGTGGGAAGCCTAAAAGAGAACATACTTGGAACTTGTTTGCTATGTG 960
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 GTTCTTCTTTCGATGACTACTCGCCCCGTTGTCGTTGCAGCCATTGTAGAATGCTGGTGC 1020
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 TAGTGTGCTCCACATGTCAGGATTCCACTAAGGATTATGTTTGCGAGTTGTGCCAAAAGA 1080
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 ACGGAAAGCAATGCTGCCAAACGTCACCAAGGCAAGGTTGCAAAACAGAGTCAGAGCTAA 1140
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 TAGATTCTTCTGACTTTGGAATACCAATGATTATTAATCAAAGTGCAACTTCAACCATTC 1200
consensus_13658#1 ------------------------------------------------------------
consensus_13658#0 CCAGGAGTAATGGTAGTGAGCAGCTGAAGAAGCTAAAGATCCTCTGCTTGCATGGTTTCC 1260
consensus_13658#1 ----------------------------------------CCTCTGTTTGCATGGTTTCC 20
****** *************
consensus_13658#0 GTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACA 1320
consensus_13658#1 GTCAGAATGCATCAAATTTTAAGGGAAGAACATCAGCACTTGCCAAGAAGCTAAAGCACA 80
************************************************************
consensus_13658#0 TTGCCGATCTTGTCTTTATAGATGCTCCACATGAGCTTTCGTTTGTGTACAAACCAAATC 1380
consensus_13658#1 TTGCCGATCTTGTCTTTATAGATGCTCCACACGAGCTTTCGTTTGTGTACAAACCAAATC 140
******************************* ****************************
consensus_13658#0 CAGATCACTGCTCTGGCAGATCTTCACTGCCATCTGGCACACCAAAGAGAAAATACGCAT 1440
consensus_13658#1 CAGATCACTGCTCTGGCAGATCTTCACTGCCGTCTGGCACACCAAAGAGAAAATACGCAT 200
******************************* ****************************
consensus_13658#0 GGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCAC 1500
consensus_13658#1 GGCTAGTTGCTCCAAACTCAATTTTTTACGCTGAGCATGACTGGAAGATTGCAGATGCAC 260
************************************************************
consensus_13658#0 CATTCGACCCTCTTCAGTATCAGCAACAAACTGATGGATTCGAGGAATCATACGCATACC 1560
consensus_13658#1 CATTCGATCCTCTTCAGTATCAGCAACAAACCGATGGATTCGAGGAATCATACGCATACC 320
******* *********************** ****************************
consensus_13658#0 TTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGTTTCTCCCAGGGCG 1620
consensus_13658#1 TTGAACATGCTATCTCTCAGATGGGGAACATTGACGGCATTCTTGGGTTCTCCCCAGGCG 380
********************************************** ******* ****
consensus_13658#0 CAGCAATGGCAGCCTTGTTCTGCAGACAGCAGCAGAAGACTTGTGGCTCCCTCAAATTCA 1680
consensus_13658#1 CAGCAATGGGAGCCTTGTTCTGCAGACAGCAGCAGAAGACATGGGGGTCCCTCAAATTAA 440
********* ****************************** ** ** *********** *
consensus_13658#0 GGTTTGGGATATTCTGCTCTGGTTATCCAGCACCGATCATAAGTGATTTTGACGGTGAGC 1740
consensus_13658#1 GGGTGGGGA-ATTCTGGTCTGGG-GTTTCCCCCCCATCATTAATGAATTTGACCGGGAGC 498
** * **** ****** ***** * * ** ***** * *** ****** * ****
consensus_13658#0 C-AATTAAGCTCCCCTCGCTTCATTGCTTTGGCAACTCTGAAGATCAT-GACAGGCAGAT 1798
consensus_13658#1 CCAATTAAACCCCCTTCCCTTTATTGCTTTGGGGACTCTTAAGAATATTGACGGGCGGAT 558
* ****** * *** ** *** ********** ***** **** ** *** *** ***
consensus_13658#0 AGCAAA-CAGGGCAAGCACCGAACTCGCGAATCGATTTGATAAGAGTTGTCGCTCTGT-T 1856
consensus_13658#1 AGCAAAACGGGGGAGGCCCGCAACCTCCGAATTAATTTGTTAAGAAATGTCGCTCTCTGT 618
****** * *** * ** * *** ***** ***** ***** ********* * *
consensus_13658#0 ATTGAG-CATGATATGGGCCATATAATTCCTACTC-GGCCGCCCTTTATTGATAAAATAA 1914
consensus_13658#1 ATTGGGGCATGAATTGGGCCCCATAAATTCTACTCCGGCGGCCCCTTTTTGATAAA-TAA 677
**** * ***** ****** **** * ****** *** **** ** ******** ***
consensus_13658#0 AAGAGTTTCTGTCCAATTTTATTTGAAATGTTTGGAAATAAGGCAATATGCTTTGTTGTA 1974
consensus_13658#1 AAAAGAATCTGTGCCACTTTTTTGAAAAAGGGTGGGAAAAAAGGAAAAGCTCTTGTTGGG 737
** ** ***** * * *** ** *** * *** ** ** * ** * ******
consensus_13658#0 AGTTAACTTATGACCCCTCTTTTGATGCATATCATCTGTTGAGTTGTTCTATGCTCATGC 2034
consensus_13658#1 AAGTTAACTATTAACCCCCTTTTGAGGATTAATATGGTTGGGATTGGTTCTTTTCTATAA 797
* * * *** * *** ******* * ** ** * * *** * * **
consensus_13658#0 TGACTGTATGGTTTGCAGCCACCTTCCACTACTTTGAACCCCTATTGATTTATGATATAT 2094
consensus_13658#1 AACAAAAACGGGGCGGNGGGGGGGGCCGGGGCCCCCNNNCCCCCTTCGTGNGGGGGTTTC 857
* ** * * ** * *** ** * * *
consensus_13658#0 GCAATTTATGCAAAAAAAAAGAAAAAGA 2122
consensus_13658#1 TCCGCGCCCCCTGGCG------------ 873
* *
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||