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Oryza sativa
cluster # 13659 cluster # 13659       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13659#0 length = 1174 sequences # 6  
consensus_13659#1 length = 924 sequences # 7  

consensusID : consensus_13659#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1174
fasta sequence
                              [GCAGGGTCTGAAAGCAGGAACAAAGAAACAAAAGTATGAGAAAATCAGTGAGAAAAAAGTTGCAACATCAATTGAGGCTCTATGCCGAGGCTATCCTACTGAGTTTGCATCATATTTCCACTATTGCCGCTCACTGCGGTTTGATGACAAGCCTGATTATTCCTACCTTAAGCGACTTTTCCGTGACCTTTTTATCCGGGAAGGTTTTCAGTTTGACTATGTGTTTGACTGGACAATACTGAAGTACCAGCAATCTCAAATTGCTAGTGCTCCACCCCGTGCAGTGGGCCATGGTGCAGGACCTTCTGGGTTAGCACCACCAGCATTGCAAAACGACAGGCAGTCAGGTGTTGATGAAGGAAGGACTAGTGGTTGGTCATCAATGGATCGGCGCCGTGCCCCACCCCCTATTGCAAGTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCCCTGGGGCA-TTTCGGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTCAATTCGGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAA-TTTTGACGGGGATGAGAGGGTTCAGTACTAGCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCACAGCATCTCCTGTTGAGTTTTGTATCACAGGATATGTTAGGAGGATGTGAAGTGCTTTTGCCAGATGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCTTATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCTCTAGTTCATTGGTCAGCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACTATGTCTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAACTCGAAAATGTAGAATGTTTCATCAAAAAAAAAAA]

[+] EMBL CF306830             [GCAGGGTCTGAAAGCAGGAACAAAGAAACAAAAGTATGAGAAAATCAGTGAGAAAAAAGTTGCAACATCAATTGAGGCTCTATGCCGAGGCTATCCTACTGAGTTTGCATCATATTTCCACTATTGCCGCTCACTGCGGTTTGATGACAAGCCTGATTATTCCTACCTTAAGCGACTTTTCCGTGACCTTTTTATCCGGGAAGGTTTTCAGTTTGACTATGTGTTTGACTGGACAATACTGAAGTACCAGCAATCTCAAATTGCTAGTGCTCCACCCCGTGCAGTGGGCCATGGTGCAGGACCTTCTGGGTTAGCACCACCAGCATTGCAAAACGACAGGCAGTCAGGTGTTGATGAAGGAAGGACTAGTGGTTGGTCATCAATGGATCGGCGCCGTGCCCCACCCCCTATTGCAAGTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF307457             [                                          AATCAGTGAGAAAAAAGTTGCAACATCAATTGAGGCTCTATGCCGAGGCTATCCTACTGAGTTTGCATCATATTTCCACTATTGCCGCTCACTGCGGTTTGATGACAAGCCTGATTATTCCTACCTTAAGCGACTTTTCCGTGACCTTTTTATCCGGGAAGGTTTTCAGTTTGACTATGTGTTTGACTGGACAATACTGAAGTACCAGCAATCTCAAATTGCTAGTGCTCCACCCCGTGCAGTGGGCCATGGTGCAGGACCTTCTGGGTTAGCACCACCAGCATTGCAAAACGACAGGCAGTCAGGTGTTGATGAAGGAAGGACTAGTGGTTGGTCATCAATGGATCGGCGCCGTGCCCCACCCCCTATTGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF307685             [                                                                                                                                                                        TAAGCGACTTTTCCGTGACCTTTTTATCCGGGAAGGTTTTCAGTTTGACTATGTGTTTGACTGGACAATACTGAAGTACCAGCAATCTCAAATTGCTAGTGCTCCACCCCGTGCAGTGGGCCATGGTGCAGGACCTTCTGGGTTAGCACCACCAGCATTGCAAAACGACAGGCAGTCAGGTGTTGATGAAGGAA GACTAGTGGTTGGTCATCAATGGATCGGCGCCGTGCCCCACCCCCTATTGCAAGTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCCCTGGGGCATTTTCGGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTCAATTCGGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF324492             [                                                                                                                                                                                                  TCCGGGAAGGTTTTCAGTTTGACTATGTGTTTGACTGGACAATACTGAAGTACCAGCAATCTCAAATTGCTAGTGCTCCACCCCGTGCAGTGGGCCATGGTGCAGGACCTTCTGGGTTAGCACCACCAGCATTGCAAAACGACAGGCAGTCAGGTGTTGATGAAGGAAGGACTAGTGGTTGGTCATCAATGGATCGGCGCCGTGCCCCACCCCCTATTGCAAGTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCCCTGGGGCA TTTCGGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTCAATTCGGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OS1162A              [                                                                                                                                                                                                                                                                                                                                                                                  GGTTGGTCATCAATGGATCGGCGCCGTGCCCCACCCCCTATTGCAAGTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCCCGT ATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCCCTGGGGCA TTTCGGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTCAATTCGGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAATTTTTGACGGGGATGAGAGGGTTCAGTACTAGCAATGAAG                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU055959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCCCTGGGGCA TTTCGGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTCAATTCGGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAA TTTTGACGGGGATGAGAGGGTTCAGTACTAGCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCACAGCATCTCCTGTTGAGTTTTGTATCACAGGATATGTTAGGAGGATGTGAAGTGCTTTTGCCAGATGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCTTATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCTCTAGTTCATTGGTCAGCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACTATGTCTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAACTCGAAAATGTAGAATGTTTCATCAAAAAAAAAAA]


>consensus_13659#0 GCAGGGTCTGAAAGCAGGAACAAAGAAACAAAAGTATGAGAAAATCAGTGAGAAAAAAGT TGCAACATCAATTGAGGCTCTATGCCGAGGCTATCCTACTGAGTTTGCATCATATTTCCA CTATTGCCGCTCACTGCGGTTTGATGACAAGCCTGATTATTCCTACCTTAAGCGACTTTT CCGTGACCTTTTTATCCGGGAAGGTTTTCAGTTTGACTATGTGTTTGACTGGACAATACT GAAGTACCAGCAATCTCAAATTGCTAGTGCTCCACCCCGTGCAGTGGGCCATGGTGCAGG ACCTTCTGGGTTAGCACCACCAGCATTGCAAAACGACAGGCAGTCAGGTGTTGATGAAGG AAGGACTAGTGGTTGGTCATCAATGGATCGGCGCCGTGCCCCACCCCCTATTGCAAGTGT TGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCC CGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGT TTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCAC TGATGCAAGCCCTGGGGCATTTCGGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTCAA TTCGGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGA GTCTGCCCTCAAAGGTATTGAAGGTCTTAATTTTGACGGGGATGAGAGGGTTCAGTACTA GCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCACAGCA TCTCCTGTTGAGTTTTGTATCACAGGATATGTTAGGAGGATGTGAAGTGCTTTTGCCAGA TGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCT TATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCTCTAG TTCATTGGTCAGCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACTATGT CTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAAC TCGAAAATGTAGAATGTTTCATCAAAAAAAAAAA



consensusID : consensus_13659#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 924
fasta sequence
                              [TATTGCAAGTGTTGGGGGTGGGGCACGGCGCCGATCCATTGATGACCAACCACTAGTCCTTCCTTCATCAATGGATCGGCGCCGTGCCCCACCNCCTATTGGCAAGTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCCCTGGGGCATTTC-GGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTC-AATTC-GGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAATTTTGACGGGGATGAGAGGGTTCAGTACTAGCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCACAGCATCTCCTGTTGAGTTTTGTATCACA-GGATATGTTAGGAGGATGTGAAGTGCTTTTGCCAGATGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCTTATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCTCTAGTTCATTGGTCAGCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACTATGTCTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAACTCGAAAATGTAGAATGTTTCATCAGATCATTGATTGACCTGAAGATAAAAATGNCTNNTGNTCTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU055958             [TATTGCAAGTGTTGGGGGTGGGGCACGGCGCCGATCCATTGATGACCAACCACTAGTCCTTCCTTCATCAATGGATCGGCGCCGTGCCCCACCNCCTATTGGCAAGTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCCCTGGGGCATTTCGGGANAACCTCTGGTCCCCNGAAAAGCTCACCAGTCNAATTCGGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA998189             [                                                                                                        AGTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTACTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCCCTGGGGCATTTC GGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTC AATTC GGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAATTTTGACGGGGATGAGAGGGTTCAGTACTAGCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCACAGCATCTCCTGTTGAGTTTTGTATCACA GGATATGTTAGGAGGATGTGAAGTGCTTTTGCCAGATGATGGTCCTCTGGACACGGTAAATAAG                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB680613             [                                                                                                                                                                                          ATTTTTTCGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCCCTGGGGCATTTC GGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTC AATTC GGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAATTTTGACGGGGATGAGAGGGTTCAGTACTAGCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCACAGCATCTCCTGTTGAGTTTTGTATCACA GGATATGTTAGGAGGATGTGAAGTGCTTTTGCCAGATGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCTTATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCTCTAGTTCATTGGTCAGCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACTATGTCTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAACTCGAAAATGTAGAATGTTTCATCAGATCATTGATTGACCTGAAGAT                                                 ]
[-] EMBL CB964577             [                                                                                                                                                                                                                                                                                                             TGGGGCATTTC GGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTC AATTC GGCAGAACCCAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAATTTTGACGGGGATGAGAGGGTTCAGTACTAGCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCACAGCATCTCCTGTTGAGTTTTGTATCACA GGATATGTTAGGAGGATGTGAAGTGCTTTTGCCAGATGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCTTATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCTCTAGTTCATTGGTCAGCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACTATGTCTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAACTCGAAAATGTAGAATGTTT                                                                            ]
[+] EMBL BM419672             [                                                                                                                                                                                                                                                                                                                                                                                                   ACTCATCTAACGTTAAGAATTACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAATTTTGACGGGGATGAGAGGGTTCAGTACTAGCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCACAGCATCTCCTGTTGAGTTTTGTATCACACGGATATGTTAGGAGGATGTGAAGTGCTTTTGCCAGATGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCTTATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCTCTAGTTCATTGGTCAGCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACTATGTCTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAACTCGAAAATGTAGAATGTTTCATCAGATCATTGATTGACCTGAAAAAAAAAA                                            ]
[+] EMBL CF298442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tAGATTTGTTTTACA GGATATGTTAGGAGGATGTGACGTGCTTTTGCCAGATGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCTTATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGTCNT TCTAGTTCATTGGTCAGCCGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACTGTGTCTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAACTCGAAAATGTAGAATGTTTCATCAGATCATTGATTGACCTGAAGA                                                  ]
[+] EMBL C98213               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCTTATAATTAATGTGNCGGTTCTGTAAATGTCTTTNTTATTCGTTTGCTGGGGCCTCTNTAGTTCATTGGTCAGCTGTATCCCCATTTNTTTTTGNTCCNGTTCCATGNCNGGTTTTTNTGTCTCGGTATNGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAACTCGAAAATGTAGAATGTTTCATCAGATCATTGATTGACCTGAAGATACTTCTGNCTNNTGNTCTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13659#1 TATTGCAAGTGTTGGGGGTGGGGCACGGCGCCGATCCATTGATGACCAACCACTAGTCCT TCCTTCATCAATGGATCGGCGCCGTGCCCCACCNCCTATTGGCAAGTGTTGGGACTTTGG CTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAGAGCCCGTGATATCTG CCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTGCTGTTTCAAGTAGCC GAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTGCCACTGATGCAAGCC CTGGGGCATTTCGGAGAACCTCTGGTCCCCAGAAAAGCTCACCAGTCAATTCGGCAGAAC CAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATTACGAGTCTGCCCTCA AAGGTATTGAAGGTCTTAATTTTGACGGGGATGAGAGGGTTCAGTACTAGCAATGAAGGA ACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCACAGCATCTCCTGTTGA GTTTTGTATCACAGGATATGTTAGGAGGATGTGAAGTGCTTTTGCCAGATGATGGTCCTC TGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAGCTCTTATAATTAATG TGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCTCTAGTTCATTGGTCA GCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACTATGTCTCGGTATAGC CAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGTGAACTCGAAAATGTA GAATGTTTCATCAGATCATTGATTGACCTGAAGATAAAAATGNCTNNTGNTCTTTTGAAA AAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13659#0      GCAGGGTCTGAAAGCAGGAACAAAGAAACAAAAGTATGAGAAAATCAGTGAGAAAAAAGT 60
consensus_13659#1      ------------------------------------------------------------
                                                                                   

consensus_13659#0      TGCAACATCAATTGAGGCTCTATGCCGAGGCTATCCTACTGAGTTTGCATCATATTTCCA 120
consensus_13659#1      ------------------------------------------------------------
                                                                                   

consensus_13659#0      CTATTGCCGCTCACTGCGGTTTGATGACAAGCCTGATTATTCCTACCTTAAGCGACTTTT 180
consensus_13659#1      ------------------------------------------------------------
                                                                                   

consensus_13659#0      CCGTGACCTTTTTATCCGGGAAGGTTTTCAGTTTGACTATGTGTTTGACTGGACAATACT 240
consensus_13659#1      ------------------------------------------------------------
                                                                                   

consensus_13659#0      GAAGTACCAGCAATCTCAAATTGCTAGTGCTCCACCCCGTGCAGTGGGCCATGGTGCAGG 300
consensus_13659#1      ------------------------------------------------------------
                                                                                   

consensus_13659#0      ACCTTCTGGGTTAGCACCACCAGCATTGCAAA-ACGACA-GGCAGTCAGGTGTTGATGAA 358
consensus_13659#1      --------------TATTGCAAGTGTTGGGGGTGGGGCACGGCGCCGATCCATTGATGAC 46
                                      *   * **  ***       * ** ***    *    ******* 

consensus_13659#0      GGAAGGACTAGTGGTTGGT-CATCAATGGATCGGCGCCGTGCCCCACCCCCTATTG-CAA 416
consensus_13659#1      C-AACCACTAGTCCTTCCTTCATCAATGGATCGGCGCCGTGCCCCACCNCCTATTGGCAA 105
                         **  ******  **  * **************************** ******* ***

consensus_13659#0      GTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAG 476
consensus_13659#1      GTGTTGGGACTTTGGCTAAACAGAAGGCACCTGTGGGAAATGATGCTTCTTTTTCTAAAG 165
                       ************************************************************

consensus_13659#0      AGCCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTG 536
consensus_13659#1      AGCCCGTGATATCTGCCTCGAATTTTTTGGGACGATCTAGTGGATCTTCAAGGAGGCCTG 225
                       ************************************************************

consensus_13659#0      CTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTG 596
consensus_13659#1      CTGTTTCAAGTAGCCGAGATGTGATGCCTATTGATACTTCTGAACCATCTCGAACTCGTG 285
                       ************************************************************

consensus_13659#0      CCACTGATGCAAGCCCTGGGGCATTTCGGAGAACCTCTGGTCCCCAGAAAAGCTCACCAG 656
consensus_13659#1      CCACTGATGCAAGCCCTGGGGCATTTCGGAGAACCTCTGGTCCCCAGAAAAGCTCACCAG 345
                       ************************************************************

consensus_13659#0      TCAATTCGGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATT 716
consensus_13659#1      TCAATTCGGCAGAACCAAAGCATTCATCTTCTGCCCGACACTCATCTAACGTTAAGAATT 405
                       ************************************************************

consensus_13659#0      ACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAATTTTGACGGGGATGAGAGGGTTCAGT 776
consensus_13659#1      ACGAGTCTGCCCTCAAAGGTATTGAAGGTCTTAATTTTGACGGGGATGAGAGGGTTCAGT 465
                       ************************************************************

consensus_13659#0      ACTAGCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCAC 836
consensus_13659#1      ACTAGCAATGAAGGAACATCTACATGTGCTCTGTAAAAATCATAATCTGTAGATGAGCAC 525
                       ************************************************************

consensus_13659#0      AGCATCTCCTGTTGAGTTTTGTATCACAGGATATGTTAGGAGGATGTGAAGTGCTTTTGC 896
consensus_13659#1      AGCATCTCCTGTTGAGTTTTGTATCACAGGATATGTTAGGAGGATGTGAAGTGCTTTTGC 585
                       ************************************************************

consensus_13659#0      CAGATGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAG 956
consensus_13659#1      CAGATGATGGTCCTCTGGACACGGTAAATAAGCGGTCAGCCTGAGGTGCCTGAAATTTAG 645
                       ************************************************************

consensus_13659#0      CTCTTATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCT 1016
consensus_13659#1      CTCTTATAATTAATGTGACGGTTCTGTAAATGTCTTTATTATTCGTTTGCTGGGGCCTCT 705
                       ************************************************************

consensus_13659#0      CTAGTTCATTGGTCAGCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACT 1076
consensus_13659#1      CTAGTTCATTGGTCAGCTGTATCCCCATTTCTATTCCTTCCAGTACCATGTCCAGATACT 765
                       ************************************************************

consensus_13659#0      ATGTCTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGT 1136
consensus_13659#1      ATGTCTCGGTATAGCCAAGTGCCCAAGTGCAACTGGTCAAACTTGTATTTGGAAACTGGT 825
                       ************************************************************

consensus_13659#0      GAACTCGAAAATGTAGAATGTTTCATCAAAAAAAAAAA---------------------- 1174
consensus_13659#1      GAACTCGAAAATGTAGAATGTTTCATCAGATCATTGATTGACCTGAAGATAAAAATGNCT 885
                       **************************** *  *   *                       

consensus_13659#0      ---------------------------------------
consensus_13659#1      NNTGNTCTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA 924
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)