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Oryza sativa
cluster # 13661 cluster # 13661       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13661#0 length = 1530 sequences # 12  
consensus_13661#1 length = 361 sequences # 1  

consensusID : consensus_13661#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1530
fasta sequence
                              [GACCTGGAGGAGCGGTGCGTTCTCCTTCTCCCTCCCCGGCCCCTAGCCGCCGCACCCCCACCCTCGCCCGCCTCTCGCCGTCGCCGGAACGGAAAATCATGGGCGCGGAGGCAGAGCACCGCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCTACCCCTGTTGGGAGGACCGACGGCGACGCCCCTCCCATGGTGCTGGGCCTGCAGCTGTCGGCGCTCATCGACCACGTCGCGCGCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGACCGCGGCGGTTCACAGCAGGTCTGTATTGAGGAGTTGAATCATATTC-TGGCTGAAGTGAATGCTCAAATCCTCCCTTGCCGTGATGACCTTTCTTCAATAAGGACTATAGCCGGTGGTAGTGTCGCCAACACAATTCGAGGTCTCTCAGCAGGTTTTGGGATATCAACTGGAATAATTGGAGCTTGTGGAGATGACAGCCAGGGCGTTTTGTTTGTCAGCAACATGAGCTTTAGTGGAGTAGACCTCACAAGATTAAGGACAAAAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCGCACCATGCGCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTA-TCA-TTGGATTTGGCTAGTTTTGAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTA-GGGGGAGAGCTGACA-T-TTGATCCAGAGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTCTAAGGGATGCATAGCGAAGCATGGGAAGCA-GGTGGTTCAAGTGGCGGCAACCGGGGAGAGTAATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGA-GCGGGTTCCTGTACGGGTTGGTGAAAGGGCTGGCA-TTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGGGTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGCCTTTTACTTGTCAAGCTTCCAAGAAAGAAACAAAGATTCAGACCATGGTCATTGATGGCTTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTGAGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCGCTGATTATTCAATTTGCTCGAGAAAACTC--ATATATATATATATAGTATAATAAAGTAACATAAAAGTTTGGATGTATGAAAATCTGAACGTGTTTGTT]

[+] EMBL AK066907             [GACCTGGAGGAGCGGTGCGTTCTCCTTCTCCCTCCCCGGCCCCTAGCCGCCGCACCCCCACCCTCGCCCGCCTCTCGCCGTCGCCGGAACGGAAAATCATGGGCGCGGAGGCAGAGCACCGCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCTACCCCTGTTGGGAGGACCGACGGCGACGCCCCTCCCATGGTGCTGGGCCTGCAGCTGTCGGCGCTCATCGACCACGTCGCGCGCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGACCTCGGCGGTTCACAGCAGGTCTGTATTGAGGAGTTGAATCATATTC TGGCTGAAGTGAATGCTCAAATCCTCCCTTGCCGTGATGACCTTTCTTCAATAAGGACTATAGCCGGTGGTAGTGTCGCCAACACAATTCGAGGTCTCTCAGCAGGTTTTGGGATATCAACTGGAATAATTGGAGCTTGTGGAGATGACAGCCAGGGCGTTTTGTTTGTCAGCAACATGAGCTTTAGTGGAGTAGACCTCACAAGATTAAGGACAAAAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCGCACCATGCGCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTA TCA TTGGATTTGGCTAGTTTTGAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTA GGGGGAGAGCTGACA T TTGATCCAGAGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTCTAAGGGATGCATAGCGAAGCATGGGAAGCA GGTGGTTCAAGTGGCGGCAACCGGGGAGAGTAATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGA GCGGGTTCCTGTACGGGTTGGTGAAAGGGCTGGCA TTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGGGTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGCCTTTTACTTGTCAAGCTTCCAAGAAAGAAACAAAGATTCAGACCATGGTCATTGATGGCTTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTGAGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCGCTGATTATTCAATTTGCTCGAGAAAACTC  ATATATATATATATAGTATAATAAAGTAACATAAAAGTTTGGATGTATGAAAATCTGAACGTGTTTGTT]
[+] EMBL AU173260             [               TGCGTTCTCCTTCTCCCTCCCCGGCCCCTAGCCGCCGCACCCCCACCCTCGCCCGCCTCTCGCCGTCGCCGGAACGGAAAATCATGGGCGCGGAGGCAGAGCACCGCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCTACCCCTGTTGGGAGGACCGACGGCGACGCCCCTCCCATGGTGCTGGGCCTGCAGCTGTCGGCGCTCATCGACCACGTCGCGCGCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGACCGCGGCGGTTCACAGCAGGTCTGTATTGAGGAGTTGAATCATATTC TGGCTGAAGTGAATGCTCAAATCCTCCCTTGCCGTGATGACCTTTCTTCAATAAGGACTATAGCCGGTGGTAGTGTCGCCAACACAATTCGAGGTCTCTCAGCAGGTTTTGGGATATCAACTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB663547             [                      TCCTTCTCCCTCCCCGGCCCCTAGCCGCCGCACCCCCACCCTCGCCCGCCTCTCGCCGTCGCCGGAACGGAAAATCATGGGCGCGGAGGCAGAGCACCGCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCTACCCCTGTTGGGAGGACCGACGGCGACGCCCCTCCCATGGTGCTGGGCCTGCAGCTGTCGGCGCTCATCGACCACGTCGCGCGCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGACCGCGGCGGTTCACAGCAGGTCTGTATTGAGGAGTTGAATCATATTC TGGCTGAAGTGAATGCTCAAATCCTCCCTTGCCGTGATGACCTTTCTTCAATAAGGACTATAGCCGGTGGTAGTGTCGCCAACACAATTCGAGGTCTCTCAGCAGGTTTTGGGATATCAACTGGAATAATTGGAGCTTGTGGAGATGACAGCCAGGGCGTTTTGTTTGTCAGCAACATGAGCTTTAGTGGAGTAGACCTCACAAGATTAAGGACAAAAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCGCACCATGCGCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTA TCA TTGGATTTGGCTAGTTTTGAGATGGNTCGTGACTATAGGACACAACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB664705             [                           CTCCCTCCCCGGCCCCTAGCCGCCGCACCCCCACCCTCGCCCGCCTCTCGCCGTCGCCGGAACGGAAAATCATGGGCGCGGAGGCAGAGCACCGCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCTACCCCTGTTGGGAGGACCGACGGCGACGCCCCTCCCATGGTGCTGGGCCTGCAGCTGTCGGCGCTCATCGACCACGTCGCGCGCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGACCGCGGCGGTTCACAGCAGGTCTGTATTGAGGAGTTGAATCATATTC TGGCTGAAGTGAATGCTCAAATCCTCCCTTGCCGTGATGACCTTTCTTCAATAAGGACTATAGCCGGTGGTAGTGTCGCCAACACAATTCGAGGTCTCTCAGCAGGTTTTGGGATATCAACTGGAATAATTGGAGCTTGTGGAGATGACAGCCAGGGCGTTTTGTTTGTCAGCAACATGAGCTTTAGTGGAGTAGACCTCACAAGATTAAGGACAAAAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCGCACCATGCGCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTA TCA TTGGATTTGGCTAGTTTTGAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGNCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C91697               [                              CCTCCCCGGCCCCTAGCCGCCGCACCCCCACCCTCGCCCGCCTCTCGCCGTCGCCGGAACGGAAAATCATGGGCGCGGAGGCAGAGCACCGCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCTACCCCTGTTGGGAGGACCGACGGCGACGNCCCTCCCATGGTGCTGGGCCTGCAGCTGTCGGCGCTCATCGACCACGTCGCGCGCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGACCGCGGCGGTTCACAGCAGGTCTGTATTGAGGAGTTGAATCATATTCTTGGCTGAAGTGAATGCTCAAATCCTNCCTTGCCGTGATGACCTTTCTTCAATAAGG CTATAGCCGGTNGTAGTGTTGGCAACANAATTCGAGGTTTTTAAGNAGGTTTT GGATATCAACTTG ATAATTTGAGCTTNTGGAGAT ACAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF309770             [                                                                                                                                                                                                                                                                                                                                       GCTGAAGTGAATGCTCAAATCCTCCCTTGCCGTGATGACCTTTCTTCAATAAGGACTATAACCGGTGGTAGTGTCGCCAACACAATTCGAGGTCTCTCAGCAGGTTTTGGGATATCAACTGGAATAATTGGAGCTTGTGGAGATGACAGCCAGGGCGTTTTGTTTGTCAGCAACATGAGCTTTAGTGGAGTAGACCTCACAAGATTAAGGACAAAAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCGCACCATGCGCCCCTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTATTCA TTGGGTTTGGCTAGTTTTGAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTAGGGGGGAGAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB663548             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAATCGCACCATGCGCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTA TCA TTGGATTTGGCTAGTTTTGAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTA GGGGGAGAGCTGACA T TTGATCCAGAGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTCTAAGGGATGCATAGCGAAGCATGGGAAGCA GGTGGTTCAAGTGGCGGCAACCGGGGAGAGTAATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGA GCGGGTTCCTGTACGGGTTGGTGAAAGGGCTGGCA TTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGGGTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGCCTTTTACTTGTCAAGCTTCCAAGAAAGAAACAAAGATTCAGACCATGGTCATTGATGGCTTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTGAGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCGCTGATTAT                                                                                            ]
[-] EMBL CB664706             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCTTCAGGCCAACGAGTTCAAAAAGGAGGACTTCAAAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAGCTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTA TCA TTGGATTTGGCTAGTTTTGAGATGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTA GGGGGAGAGCTGACA T TTGATCCAGAGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTCTAAGGGATGCATAGCGAAGCATGGGAAGCA GGTGGTTCAAGTGGCGGCAACCGGGGAGAGTAATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGA GCGGGTTCCTGTACGGGTTGGTGAAAGGGCTGGCA TTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGGGTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGAACGCCAGTGGTCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGCCTTTTACTTGTCAAGCTTCCAAGAAAGAAACAAAGATTCAGACCATGGTCATTGATGGCTTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTGAGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCGATGATTAT                                                                                            ]
[+] EMBL BM420458             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCTAAACAAGAA GTCTCTCAGTA TCACTTGGATTTGGCTAGTTTTGAGATGGTTCGTGACTATAGGACACAACTCANTGACCTTTTGGAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTA GGGGGAGAGCTGACACTGTTGATCCAGAGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTCTAAGGGATGCATAGCGAAGCATGGGAAGCACGGTGGTTCAAGTGGCGGCAACCGGGGAGAGTAAT CGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGACCCGGCTTCCTGTACGGGTTGGTGAAA GGCT GCACTTGGAGGAGTGCTGCAAGGTAGGGGCGT CACAGGTGGGTCAGT GTGAGGGCTCTGGGCGGGGAGGTGA GCCGGAGAACT GCAGTGGATGTACAA CAGATGAACGCCAGTGCCCTNCTGCTCCCTGACCTCAAGAACTGAAAAA                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU173261             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTTTTGGAAACTGGCAACATTGACCTTTGCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTA GGGGGAGAGCTGACA T TTGATCCAGAGGAGGCACTTGCTTTNTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTNTAAGGGATGCATAGCGAAGCATGGGAAGCA GGTGGTTCAAGTGGCGGCAACCGGGGAGAGTAATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGA GCGGGTTCCTGTACGGGTTGGTGAAAGGGCTGGCA TTGGAGGAGTGCTGCAAGGTAGGGGCGTGCANCGGTGGGTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAAAA                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU029689             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTTGCGA GCGGGTTCCTGTACGGGTTGGTGAAAGGGCTGGCA TTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGGGTCAGTGGTGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAAAA                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB096391             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGCCTTTTACTTGTCAAGCTTCCAAGAAAGAAACAAAGATTCAGACCATGGCCATTGATGGCTTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTGAGATGAGATGAATGGAATGGATGGTGGTGACCTGCACTGCATTACAAGTCTCGCTGATTATTCAATTTGCTCGAGAAAACTCATATATATATATATATAGTATAATAAAGTAACATAAAAGTTTGGATGTATGAAAATCTGAACGTGTT    ]


>consensus_13661#0 GACCTGGAGGAGCGGTGCGTTCTCCTTCTCCCTCCCCGGCCCCTAGCCGCCGCACCCCCA CCCTCGCCCGCCTCTCGCCGTCGCCGGAACGGAAAATCATGGGCGCGGAGGCAGAGCACC GCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCTACCCCTGTTGGGAGGACCGACG GCGACGCCCCTCCCATGGTGCTGGGCCTGCAGCTGTCGGCGCTCATCGACCACGTCGCGC GCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGACCGCGGCGGTTCACAGCAGGTCT GTATTGAGGAGTTGAATCATATTCTGGCTGAAGTGAATGCTCAAATCCTCCCTTGCCGTG ATGACCTTTCTTCAATAAGGACTATAGCCGGTGGTAGTGTCGCCAACACAATTCGAGGTC TCTCAGCAGGTTTTGGGATATCAACTGGAATAATTGGAGCTTGTGGAGATGACAGCCAGG GCGTTTTGTTTGTCAGCAACATGAGCTTTAGTGGAGTAGACCTCACAAGATTAAGGACAA AAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCGCACCATGC GCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGAGGACTTCA AAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAG CTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTATCATTGGATTTGGCTAGTTTTGAGA TGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACATTGACCTTT GCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTAGGGGGAGAGCTGACATTTGATCCAG AGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTCTA AGGGATGCATAGCGAAGCATGGGAAGCAGGTGGTTCAAGTGGCGGCAACCGGGGAGAGTA ATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGAGCGGGTTCCTGTACGGGTTGG TGAAAGGGCTGGCATTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGGGTCAGTGG TGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGA ACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGC CTTTTACTTGTCAAGCTTCCAAGAAAGAAACAAAGATTCAGACCATGGTCATTGATGGCT TGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTGA GATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCGCTGATTAT TCAATTTGCTCGAGAAAACTCATATATATATATATAGTATAATAAAGTAACATAAAAGTT TGGATGTATGAAAATCTGAACGTGTTTGTT



consensusID : consensus_13661#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 361
fasta sequence
                              [AGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGCCTTTTACTTGTCAAGCTTTCCAAGAAAGAAACAAAGATTCAGACCATGGTCATTGATGGCTTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTGAGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCGCTGATTATTCAATTTGCTCGAGAAAACTCATATATATATATATAGTATAATAAAGTAACATAAAAGTTTGGATGTATAAAAAAAAAAAAAAAAACACTGTCATGCCG]

[-] EMBL CF309771             [AGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGCCTTTTACTTGTCAAGCTTTCCAAGAAAGAAACAAAGATTCAGACCATGGTCATTGATGGCTTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTGAGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCGCTGATTATTCAATTTGCTCGAGAAAACTCATATATATATATATAGTATAATAAAGTAACATAAAAGTTTGGATGTATAAAAAAAAAAAAAAAAACACTGTCATGCCG]


>consensus_13661#1 AGTGGATGTACAAGCAGATGAACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAA GAAAAAGAAAAAAGGGCTTGCCTTTTACTTGTCAAGCTTTCCAAGAAAGAAACAAAGATT CAGACCATGGTCATTGATGGCTTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCT TTCTTTGTTTCTTAATTTGTGAGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTG CACTACAAGTCTCGCTGATTATTCAATTTGCTCGAGAAAACTCATATATATATATATAGT ATAATAAAGTAACATAAAAGTTTGGATGTATAAAAAAAAAAAAAAAAACACTGTCATGCC G



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13661#0      GACCTGGAGGAGCGGTGCGTTCTCCTTCTCCCTCCCCGGCCCCTAGCCGCCGCACCCCCA 60
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      CCCTCGCCCGCCTCTCGCCGTCGCCGGAACGGAAAATCATGGGCGCGGAGGCAGAGCACC 120
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      GCATGTCTCCCTCCCCCGCTCCCGCTCCCGCTCCCCCTACCCCTGTTGGGAGGACCGACG 180
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      GCGACGCCCCTCCCATGGTGCTGGGCCTGCAGCTGTCGGCGCTCATCGACCACGTCGCGC 240
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      GCGTCGACTGGTCCCTCCTCAACCGCATCCCCGGCGACCGCGGCGGTTCACAGCAGGTCT 300
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      GTATTGAGGAGTTGAATCATATTCTGGCTGAAGTGAATGCTCAAATCCTCCCTTGCCGTG 360
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      ATGACCTTTCTTCAATAAGGACTATAGCCGGTGGTAGTGTCGCCAACACAATTCGAGGTC 420
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      TCTCAGCAGGTTTTGGGATATCAACTGGAATAATTGGAGCTTGTGGAGATGACAGCCAGG 480
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      GCGTTTTGTTTGTCAGCAACATGAGCTTTAGTGGAGTAGACCTCACAAGATTAAGGACAA 540
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      AAAAGGGGCACACTGCTCAGTGTGCATGCTTGGTCGATGCAAGTGGCAATCGCACCATGC 600
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      GCCCTTGCCTATCTAGTGCAGTCAAGCTCCAGGCCAACGAGTTCAAAAAGGAGGACTTCA 660
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      AAGGCTCCAAGTGGTTGGTTGTACGATATGCAAGACAGAACATGGAACAGATCCTTGAAG 720
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      CTATTAGGATTGCTAAACAAGAAGGTCTCTCAGTATCATTGGATTTGGCTAGTTTTGAGA 780
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      TGGTTCGTGACTATAGGACACAACTCATTGACCTTTTGGAAACTGGCAACATTGACCTTT 840
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      GCTTTGCCAATGAGGATGAAGCTAGAGAGCTTCTAGGGGGAGAGCTGACATTTGATCCAG 900
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      AGGAGGCACTTGCTTTCTTGGCCAAGTACTGTAAATGGGCCGTGGTGACCCTAGCTTCTA 960
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      AGGGATGCATAGCGAAGCATGGGAAGCAGGTGGTTCAAGTGGCGGCAACCGGGGAGAGTA 1020
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      ATGCGGTGGACGCGACGGGGGCGGGGGATCTGTTTGCGAGCGGGTTCCTGTACGGGTTGG 1080
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      TGAAAGGGCTGGCATTGGAGGAGTGCTGCAAGGTAGGGGCGTGCAGCGGTGGGTCAGTGG 1140
consensus_13661#1      ------------------------------------------------------------
                                                                                   

consensus_13661#0      TGAGGGCTCTGGGCGGGGAGGTGAGGCCGGAGAACTGGCAGTGGATGTACAAGCAGATGA 1200
consensus_13661#1      ---------------------------------------AGTGGATGTACAAGCAGATGA 21
                                                              *********************

consensus_13661#0      ACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGC 1260
consensus_13661#1      ACGCCAGTGGCCTGCTGCTCCCTGACCTCAAGAACTGAAGAAAAAGAAAAAAGGGCTTGC 81
                       ************************************************************

consensus_13661#0      CTTTTACTTGTCAAGCTT-CCAAGAAAGAAACAAAGATTCAGACCATGGTCATTGATGGC 1319
consensus_13661#1      CTTTTACTTGTCAAGCTTTCCAAGAAAGAAACAAAGATTCAGACCATGGTCATTGATGGC 141
                       ****************** *****************************************

consensus_13661#0      TTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTG 1379
consensus_13661#1      TTGATTGTTTGTTAGTTAGACCTCCTATGCTCGGTTTCTTTCTTTGTTTCTTAATTTGTG 201
                       ************************************************************

consensus_13661#0      AGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCGCTGATTA 1439
consensus_13661#1      AGATGAGATGAATGGAATGGATGGTGGTAACCTGCACTGCACTACAAGTCTCGCTGATTA 261
                       ************************************************************

consensus_13661#0      TTCAATTTGCTCGAGAAAACTCATATATATATATATAGTATAATAAAGTAACATAAAAGT 1499
consensus_13661#1      TTCAATTTGCTCGAGAAAACTCATATATATATATATAGTATAATAAAGTAACATAAAAGT 321
                       ************************************************************

consensus_13661#0      TTGGATGTATGAAAATCTGAACGTGTTTGTT--------- 1530
consensus_13661#1      TTGGATGTATAAAAAAAAAAAAAAAAACACTGTCATGCCG 361
                       ********** ****    **         *         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)