cluster # 13662

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Oryza sativa
cluster # 13662 cluster # 13662 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13662#0 length = 1269 sequences # 10

consensus_13662#1 length = 551 sequences # 2
consensus_13662#2 length = 378 sequences # 1

consensusID : consensus_13662#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1269
fasta sequence

                              [AGAGGAGGAGAAGTCAGTGATTGCTCGCTCGTTTTTCCAAGAAACCGGCCGGACTCGAGCGCTCGTCAAGTCCGTGTTCCAGATCGAGTTTGTAGAGCCATGGCGG-CGGCGGCGCGCGCGATCATATGCGAGATGGCGCCGCAGAGGGGGGCGGCGGCGGCGCCGGCGG-GCCGGCGCAGCAG-AAGGCGACGACGAGACGGGACGGTGGGAAGATCATGCTCCAGCCACGCCTCTGCACGCTCCGGTCGTACGGCGCCGGCAGCGGCGTGGTGGCGCGGAGGCGGGTGGTGGAGGAGGAGGAGAGCGGCGGCGGCGGCGCGGGGTCCTCCCCGTTCTTCGCGTCGCTAGCCGACTACATCGAGAGCACCCGCAAGAGCCAGGACTTCGAGACCATCTCCGGCCGCCTCGCCATGGTGGCG-TTCGCGACGGCGGTGGCGGTGGAGTTGACGACGGGGAACTCGCTGTTCAAGAAGCTGGACATGCAGGAGATCGAGGAGGCGGCCGGGGTGTGCCTCGCCGTGGTCGCCGGCGCCG-CCGCGTTCGCGTGGGTGTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCACGCTGGG-TTGCAGCGCCTTCGTCGACTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCGAGCTGCAGGACTGGT-CCGACGACGTATGAATCGACGTCATCAGCAATTCAGTATAGATCGAAATGATATACATGTATAGATATGCGTATAGTTATATAGATGGTATACTATAACAGCATGATTAGCAGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCATGTGTGAAGCAAACTTTTGCAAGTTTCATGATTTCATCATCGTCGATTCACAGACGCATGGCGCATGCAGAGATATGATTCAGATCATCAGATGGGATCCGGCCCACAGGATAGGATGCAGATCTAGATGGTTCAGACTTAGAATCATCGTACACAGATCCTGTAGATGGTTTTGGAAGGGTTCGGCCTATCATTACAACTTCGCAATCTGCATGGGAGTTCATTAGTCTGAATTCTGAGAGCAGATCTAAGGTTTGTTTTTTGGTCTAGCAAGGGAGTCCTGAATATGGCTGTGAAATGTGTATGTCTCTCTTCAGTGTATATATATACTGGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTTGAGACTACGGTAAA--AAAAAAGGGAAAAAAAA]

[+] EMBL AK070786             [AGAGGAGGAGAAGTCAGTGATTGCTCGCTCGTTTTTCCAAGAAACCGGCCGGACTCGAGCGCTCGTCAAGTCCGTGTTCCAGATCGAGTTTGTAGAGCCATGGCGG CGGCGGCGCGCGCGATCATATGCGAGATGGCGCCGCAGAGGGGGGTGGCGGCGGCGCCGGCGGCGCCGGCGCAGCAG AAGGCGACGACGAGACGGGACGGTGGGAAGATCATGCTCCAGCCACGCCTCTGCACGCTCCGGTCGTACGGCGCCGGCAGCGGCGTGGTGGCGCGGAGGCGGGTGGTGGAGGAGGAGGAGAGCGGCGGCGGCGGCGCGGGGTCCTCCCCGTTCTTCGCGTCGCTAGCCGACTACATCGAGAGCACCCGCAAGAGCCAGGACTTCGAGACCATCTCCGGCCGCCTCGCCATGGTGGCG TTCGCGACGGCGGTGGCGGTGGAGTTGACGACGGGGAACTCGCTGTTCAAGAAGCTGGACATGCAGGAGATCGAGGAGGCGGCCGGGGTGTGCCTCGCCGTGGTCGCCGGCGCCG CCGCGTTCGCGTGGGTGTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCACGCTGGG TTGCAGCGCCTTCGTCGACTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCGAGCTGCAGGACTGGT CCGACGACGTATGAATCGACGTCATCAGCAATTCAGTATAGATCGAAATGATATACATGTATAGATATGCGTATAGTTATATAGATGGTATACTATAACAGCATGATTAGCAGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCATGTGTGAAGCAAACTTTTGCAAGTTTCATGATTTCATCATCGTCGATTCACAGACGCATGGCGCATGCAGAGATATGATTCAGATCATCAGATGGGATCCGGCCCACAGGATAGGATGCAGATCTAGATGGTTCAGACTTAGAATCATCGTACACAGATCCTGTAGATGGTTTTGGAAGGGTTCGGCCTATCATTACAACTTCGCAATCTGCATGGGAGTTCATTAGTCTGAATTCTGAGAGCAGATCTAAGGTTTGTTTTTTGGTCTAGCAAGGGAGTCCTGAATATGGCTGTGAAATGTGTATGTCTCTCTTCAGTGTATATATATACTGGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTT                                 ]
[+] EMBL AU162654             [                     TGCTCGCTCGTTTTTCCAAGAAACCGGCCGGACTCGAGCGCTCGTCAAGTCCGTGTTCCAGATCGAGTTTGTAGAGCCATGGCGGACGGCGGCGCGCGCGATCATATGCGAGATGGCGCCGCAGAGGGGGGCGGCGGCGGCG CGGC G GCNGNCCNAGCAG AAGGCGACGACGAGACGGGACGGTGGGAAGATCATGCTCCAGCCACGCCTCTGCACGCTCCGGTCGTACGGCGCCGGCAGCGGCGTGGTGGCGCGGAGGCGGGTGGTGGAGGAGGAGGAGAGCGGCGGCGGCGGCGCGGGGTCCTCCCCGTTCTTCGCGTCGCTAGCCGACTACATCGAGAGCACCCGCAAGAGCCAGGACTTCGAGACCATCTCCGGCCGCCTCGCCATGGTGGCGTTTCGCGACGGCGGTGGCGGTGGAGTTGACGACGGGGAACTCGCTGTTCAAGAAGCTGGACATGCAGGAGATCGAGGAGGCGGCCGGGGTGTG CTCGCCGTGGTCGCCGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C72918               [                         CGCTCGTTTTTCCAAGAAACCGGCCGGACTCGAGCGCTCGTCAAGTCCGTGTTCCAGATCGAGTTTGTAGAGCCATGGCGG CGGCGGCGCGCGCGATCATATGCGAGATGGCGCCGCAGAGGGGGGCGGCGGCGGCG CGGC G GCC GCGANGCAGNAAGGCGACGACGAGACGGGACGGTGGGAAGATCATGCTCCAGCCACNNCTCTGCACGCTCCGGTCGTACGGCGCCGGCAGCGGCGTGGTGGCGCGGAGGCGGGTGGTGGAGGAGGAGGAGAGCGGCGGCGGCGGCGCGGGGTCCTTCCCGTTCTTCGCGTCGNTAGCCGACTACATCGAGANAACCgaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU089720             [                           CTCGTTTTTCCAAGAAACCNGCCGGACTCGAGCGCTCGTCAAGTCCGTGTTCCAGATCGAGTTTGTAGAGCCATGGCGG CGGCGGCGCGCGCGATCATATGCGAGATGGNGCCGCAGAGGGGGGCGGCGGCGGCGCCGGCGG   CNGCGGAGCAG AAGGCGACGACGAGACGGGACGGTGGGAAGATCATGCTCCAGCCACGCCTCTGCACGCTCCGGTCGTACNGCGCCGGCAGCGGCGTGGTGGCGCGGAGGCGGGTGGTGGAGGAGGAGGAGAGCGGCGGCGGCng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB662132             [                               TTTTTCCAAGAAACCGGCCGGACTCGAGCGCTCGTCAAGTCCGTGTTCCAGATCGAGTTTGTAGAGCCATGGCGG CGGCGGCGCGCGCGATCATATGCGAGATGGCGCCGCAGAGGGGGGCGGCGGCGGCGCCGGCGGCGCCGGCGCAGCAG AAGGCGACGACGAGACGGGACGGTGGGAAGATCATGCTCCAGCCACGCCTCTGCACGCTCCGGTCGTACGGCGCCGGCAGCGGCGTGGTGGCGCGGAGGCGGGTGGTGGAGGAGGAGGAGAGCGGCGGCGGCGGCGCGGGGTCCTCCCCGTTCTTCGCGTCGCTAGCCGACTACATCGAGAGGAGCCGCGAGAGCCAGGACTTCGAGACCATCTCCGGCCGCCTCGCCATGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB662133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACGACGGGGAACTCGCTGTTCAAGAAGCTGGACATGCAGGAGATCGAGGAGGCGGCCGGGGTGTGCCTCGCCGTGGTCGCCGGCGCCGCCCGCGTTCGCGTGGGTGTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCACGCTGGG TTGCAGCGCCTTCGTCGACTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCGAGCTGCAGGACTGGT CCGACGACGTATGAATCGACGTCATCAGCAATTCAGTATAGATCGAAATGATATACATGTATAGATATGCGTATAGTTATATAGATGGTATACTATAACAGCATGATTAGCAGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCATGTGTGAAGCAAACTTTTGCAAGTTTCATGATTTCATCATCGTCGATTCACAGACGCATGGCGCATGCAGAGATATGATTCAGATCATCAGATGGGATCCGGCCCACAGGATAGGATGCAGATCTAGATGGTTCAGACTTAGAATCATCGTACACAGATCCTGTAGATGGTTTTGGAAGGGTTCGGCCTATCATTACAACTTCGCAATCTGCATGGGAGTTCATTAGTCTGAATTCTGAGAGCAGATCTAAGGTTTGTTTTTTGGTCTAGCAAGGGAGTCCTGAATATGGCTGTGAAATGTGTATGTCTCTCTTCAGTGTATATATATACTGGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTTGA                               ]
[-] EMBL CB682405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCCGGGGTGTGCCTCGCCGTGGTCGCCGGCGCCG CCGCGTTCGCGTGGGTGTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCACGCTGGG TTGCAGCGCCTTCGTCGACTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCGAGCTGCAGGACTGGT CCGACGACGTATGAATCGACGTCATCAGCAATTCAGTATAGATCGAAATGATATACATGTATAGATATGCGTATAGTTATATAGATGGTATACTATAACAGCATGATTAGCAGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCATGTGTGAAGCAAACTTTTGCAAGTTTCATGATTTCATCATCGTCGATTCACAGACGCATGGCGCATGCAGAGATATGATTCAGATCATCAGATGGGATCCGGCCCACAGGATAGGATGCAGATCTAGATGGTTCAGACTTAGAATCATCGTACACAGATCCTGTAGATGGTTTTGGAAGGGTTCGGCCTATCATTACAACTTCGCAATCTGCATGGGAGTTCATTAGTCTGAATTCTGAGAGCAGATCTAAGGTTTGTTTTTTGGTCTAGCAAGGGAGTCCTGAATATGGCTGTGAAATGTGTATGTCTCTCTTCAGTGTATATATATACTGGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAAGAATAAATTCTAGAGTCTTGAGACTACGGTAAA  AAAAAAGGG        ]
[+] EMBL AU056141             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATGTTCCCGCTGGGTTTGCAGC CCTTCGTCGACTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGNCGAGCTGCAGNACTGGTCCCGACGACGTATGAATCGACGTCATCAGCAATTCAGTATAGATCGAAATGATATACATGTATAGATATGCGTATAGTTATATAGATGGTATACTATAACAGCATGATTAGCAGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCATGTGTGAAGCAAACTTTTGCAAGTTTCATGATTTCATCATCGTCGATTCACAGACGCATGGCGCATGCAGAGATATGATTCAGATCATCAGATGGGATCCGGCCCACAGGATAGGATGCAGATCTAGATGGTTCAGACTTAGAATCATCGTACACAGATCCTGTAGATGGTTTTGGAAGGGTTCGGCCTATCATTACAACTTCGCAATCTGCATGGGAGTTCATTAGTCTGAATTCTGAGAGCAGATCTAAGGTTTGTTTTTTGGTCTAGCAAGGGAGTCCTGAATATGGCTGTGAAATGTGTATGTCTCTCTTCAGTGTATATATATACTGGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTTGAGACTAAAAAAAA  AAAAA            ]
[+] EMBL AU082388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CANATGGGATCCGGCCCACAGGATNGGATGCAGATCTAGATGGTTCAGACTTAGAATCATCGTACACAGATCCTNTAGATGGTTTTGGAAGGGTNCNGCCTATCATTACAA TTCGCAATCTGCATGGGAGTTCATTAGTCTGAATNCTGAGAGCAGATCTAAGGTTTGTTTTTTGGTCTAGCAAGGGAGTCCTGAATATGGCTGTGAAATGTGTATGTCTCTCTTCAGTGTATATATATACTGGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTTGAGACTACGGTAAATTAAAAAA           ]
[+] EMBL AU055982             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGGANGGGTTCGGCCTATCATTACNACTTCGCAATCTGCATGGGAGTNCATTAGTCTGAATTNTGAGAGCNGATCTAAGGTTTGTTTTTTGGTCTAGCAAGGGAGTCCTGAATATGGCTGTGAAATGTGTATGTCTCTCTTCNGTGTATATATATACTGGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAANTCTAGNGTCTTGNNNNTNCGGTAAA  AAAAAAAAAAAAAAAAA]




>consensus_13662#0
AGAGGAGGAGAAGTCAGTGATTGCTCGCTCGTTTTTCCAAGAAACCGGCCGGACTCGAGC
GCTCGTCAAGTCCGTGTTCCAGATCGAGTTTGTAGAGCCATGGCGGCGGCGGCGCGCGCG
ATCATATGCGAGATGGCGCCGCAGAGGGGGGCGGCGGCGGCGCCGGCGGGCCGGCGCAGC
AGAAGGCGACGACGAGACGGGACGGTGGGAAGATCATGCTCCAGCCACGCCTCTGCACGC
TCCGGTCGTACGGCGCCGGCAGCGGCGTGGTGGCGCGGAGGCGGGTGGTGGAGGAGGAGG
AGAGCGGCGGCGGCGGCGCGGGGTCCTCCCCGTTCTTCGCGTCGCTAGCCGACTACATCG
AGAGCACCCGCAAGAGCCAGGACTTCGAGACCATCTCCGGCCGCCTCGCCATGGTGGCGT
TCGCGACGGCGGTGGCGGTGGAGTTGACGACGGGGAACTCGCTGTTCAAGAAGCTGGACA
TGCAGGAGATCGAGGAGGCGGCCGGGGTGTGCCTCGCCGTGGTCGCCGGCGCCGCCGCGT
TCGCGTGGGTGTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCACGCTGGGTTGCAGCG
CCTTCGTCGACTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCGAGCTGC
AGGACTGGTCCGACGACGTATGAATCGACGTCATCAGCAATTCAGTATAGATCGAAATGA
TATACATGTATAGATATGCGTATAGTTATATAGATGGTATACTATAACAGCATGATTAGC
AGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCATGTGTGAAGCAAA
CTTTTGCAAGTTTCATGATTTCATCATCGTCGATTCACAGACGCATGGCGCATGCAGAGA
TATGATTCAGATCATCAGATGGGATCCGGCCCACAGGATAGGATGCAGATCTAGATGGTT
CAGACTTAGAATCATCGTACACAGATCCTGTAGATGGTTTTGGAAGGGTTCGGCCTATCA
TTACAACTTCGCAATCTGCATGGGAGTTCATTAGTCTGAATTCTGAGAGCAGATCTAAGG
TTTGTTTTTTGGTCTAGCAAGGGAGTCCTGAATATGGCTGTGAAATGTGTATGTCTCTCT
TCAGTGTATATATATACTGGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAA
CATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTTGAGACTACGGTAAAAAAAAAGG
GAAAAAAAA

consensusID : consensus_13662#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 551
fasta sequence

                              [AAAACCATCTCCGGCCGCCTCCCCATGGTAAACAAACNCGCTCGCAACCACCTTAGCCCGTCCATGACTAACCGTTTCTTCCCTCTGTCAACCTTGCATGCAGGTTGCGTTCGCGACGGCGGTGGCGGTGGAGTTNACNACGGGGAACTCGCTGTTCAAGAAGCTGGACATGCAGGAGAACGAGGANGCGGCCGGGGTGTGCCTCGCCGTGGTTGCCGGCGCCGNCCNGTTTGCGTGGGTGTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCANGCTGGGTTGCAGCGCCTTCGTCGANTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCGAGCTGCAGGACTGGTCCGACGACGTNTGAATCGACGTCATCAGCAATTCAGTATAGATCGAAATGATATACATGTATAGATATGCGTATAGTTATATAGATGGTATACTATAACAGCATGATTAGCAGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCATGTGTGAAGCAAACTTTTGCAAAAAAAAAAAAAA]

[-] EMBL C71734               [AAAACCATCTCCGGCCGCCTCCCCATGGTAAACAAACNCGCTCGCAACCACCTTAGCCCGTCCATGACTAACCGTTTCTTCCCTCTGTCAACCTTGCATGCAGGTTGCGTTCGCGACGGCGGTGGCGGTGGAGTTNACNACGGGGAACTCGCTGTTCAAGAAGCTGGACATGCAGGAGAACGAGGANGCGGCCGGGGTGTGCCTCGCCGTGGTTGCCGGCGCCGNCCNGTTTGCGTGGGTGTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCANGCTGGGTTGCAGCGCCTTCGTCGANTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCGAGCTGCAGGACTGGTCCGACGACGTN                                                                                                                                                                                     ]
[+] EMBL C99375               [                                                                                                                                              GGGAACTCGCTGTTCAAGAAGCTGGACATGCAGGAGATCGNGGAGGCGGCCGGGGTGTGCCTCGCCGTGGTCGCCGGCGCCG CCCGTTCGCGTGGGTGTCCAGCGCGCGCACCNGGATCGGCCAGATGTTCACGCTGGGTTGCAGCGCCTTCGTCGACTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCGAGCTGCAGGACTGGTCCGACGACGTATGAATCGACGTCATCAGCAATTCAGTATAGATCGAAATGATATACATGTATAGATATGCGTATAGTTATATAGATGGTATACTATAACAGCATGATTAGCAGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCATGTGTGAAGCAAACTTTTGCAAAAAAAAAAAAAA]




>consensus_13662#1
AAAACCATCTCCGGCCGCCTCCCCATGGTAAACAAACNCGCTCGCAACCACCTTAGCCCG
TCCATGACTAACCGTTTCTTCCCTCTGTCAACCTTGCATGCAGGTTGCGTTCGCGACGGC
GGTGGCGGTGGAGTTNACNACGGGGAACTCGCTGTTCAAGAAGCTGGACATGCAGGAGAA
CGAGGANGCGGCCGGGGTGTGCCTCGCCGTGGTTGCCGGCGCCGNCCNGTTTGCGTGGGT
GTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCANGCTGGGTTGCAGCGCCTTCGTCGA
NTCGCTCATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCGAGCTGCAGGACTGGTC
CGACGACGTNTGAATCGACGTCATCAGCAATTCAGTATAGATCGAAATGATATACATGTA
TAGATATGCGTATAGTTATATAGATGGTATACTATAACAGCATGATTAGCAGAGGAAAGT
ATAGATCGATATGATATGATATGATAGATCAGCTGCATGTGTGAAGCAAACTTTTGCAAA
AAAAAAAAAAA

consensusID : consensus_13662#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 378
fasta sequence

                              [CGCGCTTTCCACGACCCTTTTANGAGATCCACTCCGTACACACCACGATCCCCTCGNTACGACATCGGCTTCTCTCGGAACGGGTCTCGGCCCCTATTCCACGTGTACCACACCCTGTTCGCACATTCCTTGCCACTGGGAGCTTCACTTAGTCTGGAATTGCTGAGAGCACGAGTCTAGAGGCTCTTGCTTCTCTTTGGTCCTAGCCAACGGGAGTTCCTGAATTACTGCCCTGNTGAAACTTGTTGCTACTGTCTCTCTTCAGTGTATATATATACTGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTTGAGACTACGGTAAAAAAAAA]

[+] EMBL BQ908566             [CGCGCTTTCCACGACCCTTTTANGAGATCCACTCCGTACACACCACGATCCCCTCGNTACGACATCGGCTTCTCTCGGAACGGGTCTCGGCCCCTATTCCACGTGTACCACACCCTGTTCGCACATTCCTTGCCACTGGGAGCTTCACTTAGTCTGGAATTGCTGAGAGCACGAGTCTAGAGGCTCTTGCTTCTCTTTGGTCCTAGCCAACGGGAGTTCCTGAATTACTGCCCTGNTGAAACTTGTTGCTACTGTCTCTCTTCAGTGTATATATATACTGGGGTTGATTGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTTGAGACTACGGTAAAAAAAAA]




>consensus_13662#2
CGCGCTTTCCACGACCCTTTTANGAGATCCACTCCGTACACACCACGATCCCCTCGNTAC
GACATCGGCTTCTCTCGGAACGGGTCTCGGCCCCTATTCCACGTGTACCACACCCTGTTC
GCACATTCCTTGCCACTGGGAGCTTCACTTAGTCTGGAATTGCTGAGAGCACGAGTCTAG
AGGCTCTTGCTTCTCTTTGGTCCTAGCCAACGGGAGTTCCTGAATTACTGCCCTGNTGAA
ACTTGTTGCTACTGTCTCTCTTCAGTGTATATATATACTGGGGTTGATTGATCAGCCCCT
AAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTTGA
GACTACGGTAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13662#0      AGAGGAGGAGAAGTCAGTGATTGCTCGCTCGTTTTTCCAAGAAACCGGCCGGACTCGAGC 60
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      GCTCGTCAAGTCCGTGTTCCAGATCGAGTTTGTAGAGCCATGGCGGCGGCGGCGCGCGCG 120
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      ATCATATGCGAGATGGCGCCGCAGAGGGGGGCGGCGGCGGCGCCGGCGGGCCGGCGCAGC 180
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      AGAAGGCGACGACGAGACGGGACGGTGGGAAGATCATGCTCCAGCCACGCCTCTGCACGC 240
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      TCCGGTCGTACGGCGCCGGCAGCGGCGTGGTGGCGCGGAGGCGGGTGGTGGAGGAGGAGG 300
consensus_13662#1      -----------------------------------------------------------A 1
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      AGAGCGGCGGCGGCGGCGCGGGGTCCTCCCCGTTCTTCGCGTCGCTAGCCGACTACATCG 360
consensus_13662#1      AAACCATCTCCGGCCGC--------CTCCCCATGGTAAACAA-ACNCGCTCGCAACCACC 52
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      AGAGCACCCGCAAGAGCCAGGACTTCGAGACCATCTCCGGCCGCCTCGCCAT--GGTGGC 418
consensus_13662#1      TTAGCCCGTCCATGACTAACCGTTTC----TTCCCTCTGTCAACCTTGCATGCAGGTTGC 108
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      GTTCGCGACGGCGGTGGCGGTGGAGTTGACGACGGGGAACTCGCTGTTCAAGAAGCTGGA 478
consensus_13662#1      GTTCGCGACGGCGGTGGCGGTGGAGTTNACNACGGGGAACTCGCTGTTCAAGAAGCTGGA 168
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      CATGCAGGAGATCGAGGAGGCGGCCGGGGTGTGCCTCGCCGTGGTCGCCGGCGCCGCCGC 538
consensus_13662#1      CATGCAGGAGAACGAGGANGCGGCCGGGGTGTGCCTCGCCGTGGTTGCCGGCGCCGNCCN 228
consensus_13662#2      ----CGCGCTTTCCACGACCCTTTTANGAGAT-CCACTCCGTACACACCACGATCCCCTC 55
                           *  *    * * **  *      *   * ** * ****     **     *  *  

consensus_13662#0      GTTC--GCGTGGGTGTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCACGCTGGGTTGC 596
consensus_13662#1      GTTT--GCGTGGGTGTCCAGCGCGCGCACCAGGATCGGCCAGATGTTCANGCTGGGTTGC 286
consensus_13662#2      GNTACGACATCGGCTTCTCTCG---GAACGGGTCTCGGCCCCTATTCCACG-TGTACCAC 111
                       * *    * * **  **   **   * **  *  ******     * ** * **     *

consensus_13662#0      AGCGCCTTCGTCGACTCGCT--CATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCG 654
consensus_13662#1      AGCGCCTTCGTCGANTCGCT--CATCGACAACATCGTCGAGGCTCTCTTCTCCGAGGGCG 344
consensus_13662#2      ACCCTGTTCGCACATTCCTTGCCACTGGGAGCTTCACTTAGTCTGGAATTGCTGAGAGCA 171
                       * *   ****   * **  *  **  *  * * **    ** **    *  * *** ** 

consensus_13662#0      AGCTGCAGGACTGGTCCGACGACGTATGAATCGACGTCATCAGCAATTCAGTATAGATCG 714
consensus_13662#1      AGCTGCAGGACTGGTCCGACGACGTNTGAATCGACGTCATCAGCAATTCAGTATAGATCG 404
consensus_13662#2      CGAGTCTAGAG-GCTCTTGCTTCTCTTTGGTCCTAGCCAACGGGAGTTCCTGAATTACTG 230
                        *   *  **  * **   *  *   *   **   * ** * * * ***   *   *  *

consensus_13662#0      AAATGATATACATGTATAGATA-TGCGTATAGTTA-TATAGATGGTATACTATAACAGCA 772
consensus_13662#1      AAATGATATACATGTATAGATA-TGCGTATAGTTA-TATAGATGGTATACTATAACAGCA 462
consensus_13662#2      CCCTGNTGAA-ACTTGTTGCTACTGTCTCTCTTCAGTGTATATA-TATACTGGGGTTGAT 288
                          ** *  * *  * * * ** **  * *  * * * ** **  ******      *  

consensus_13662#0      TGATTAGC----AGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCAT 828
consensus_13662#1      TGATTAGC----AGAGGAAAGTATAGATCGATATGATATGATATGATAGATCAGCTGCAT 518
consensus_13662#2      TGATCAGCCCCTAAAGTTAACTGTAACTAGAACATGTATCTTCTGAGGAAATAA-TAAAT 347
                       **** ***    * **  ** * **  * **     ***  * ***   *  *  *  **

consensus_13662#0      GTGTGAAGCAAACTTTTGCAAGTTTCATGATTTCATCATCGTCGATTCACAGACGCATGG 888
consensus_13662#1      GTGTGAAGCAAACTTTTGCAAAAAAAAAAAAAA--------------------------- 551
consensus_13662#2      TCTAGAGTCTTGAGACTACGGTAAAAAAAAA----------------------------- 378
                           **  *       * *       *  *                              

consensus_13662#0      CGCATGCAGAGATATGATTCAGATCATCAGATGGGATCCGGCCCACAGGATAGGATGCAG 948
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      ATCTAGATGGTTCAGACTTAGAATCATCGTACACAGATCCTGTAGATGGTTTTGGAAGGG 1008
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      TTCGGCCTATCATTACAACTTCGCAATCTGCATGGGAGTTCATTAGTCTGAATTCTGAGA 1068
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      GCAGATCTAAGGTTTGTTTTTTGGTCTAGCAAGGGAGTCCTGAATATGGCTGTGAAATGT 1128
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      GTATGTCTCTCTTCAGTGTATATATATACTGGGGGTTGATTGATCAGCCCCTAAAGTTAA 1188
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      CTGTAACTAGAACATGTATCTTCTGAGGAAATAATAAATTCTAGAGTCTTGAGACTACGG 1248
consensus_13662#1      ------------------------------------------------------------
consensus_13662#2      ------------------------------------------------------------
                                                                                   

consensus_13662#0      TAAAAAAAAAGGGAAAAAAAA 1269
consensus_13662#1      ---------------------
consensus_13662#2      ---------------------