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Oryza sativa
cluster # 13666 cluster # 13666       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13666#0 length = 1540 sequences # 11  
consensus_13666#1 length = 772 sequences # 2  

consensusID : consensus_13666#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1540
fasta sequence
                              [TCCCTTTTTTTTTAGTTTCACAAGTCAATTAACCACGACCTATTACCCATGCAATTTGATATACAGATATTTCCTGGGAGCAGGCAACAACCATCTTGCCAAATAACACACATGCTCAATCATTCTGTAGTAAATCAGGATA-TCTGTAGACAAAAAACTCAAATGCACATGCAGTTATGCACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAA-CAAAAA-AAAAGTAGGAGAGATTTACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAG-ATTT-AA-AATAGTAGATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAAGAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATACTCAATCTCTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGTGAACAGCAGATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATA-TGATTGTCATCCTCCCTCCATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACATTTCCGTTCAGCTCGACCCTCGAGGACAGCTGCAACAACTACTGCACAAGCACCGGTTCCACAAGCAAGCGTCGCACCAGCACCACGCTCCCAGACTCTCATTTTGAGGTGTGAGCGAGACAGGACCTCTACAAATTCTGTGTTGGTGCGGGCAGGAAACATTTCATGATGCTCGAATTTAGGCCCAATATCACTAAGCTTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGATTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAACTGCCAAATCAGCTTGGACAACGGCTTCATTCTTGGTGGAT-GGCAGTTTTGTTGGAATATCTGGTCCAGAGAGAATGGGCTGGCCCATATCAACCTTTACCTTGCCATCATTTTGTATTTCAGGAATGATTAGCCCAGCGCCAGTGTGAATTTTGAAGCTATGTGTTCCCTGTAGGTTTTCAAGCTCAGCTATAAACCGGGCAAAGCAACGGACTCCATTGCCACACATCTCCGGCTCACTGCCGTCCGAGTTGAAGATCCTCATGGTGTAGTCCGCGCCATTGACCCCCGGCATGACGAAGATCACACCGTCGGCGCCGACGCCGAAGTTCCTGTCGCACAGCTTCGCCGCCTCCTCCGGCGTC-ACCTTCGGCACGGCCGAATCCCTATTGTCCACCATGATGAAGTCGTTCCCAAGGCCCTGGTACTTGACGAAGTGGAGGGCGCGCTCCGACTCGCGGCGCTCGAGGAACGCGGCGGCGGCGGC--CGA-CCTGGGGGTGGACACGGCCATCGCGGCGACGCAGCGGCGCGCGGTGGGGTTCCCGCGGAGCGTGAGGCGGCGCCGGGAGGGGGCGGGGGCGGGGGTGGCGGCGAGCTTCGCGGCGGCGGCGGCGATGGTGGCGGTGGCGGCGGCGGTGGCGGACGACATGGCGGCGA]

[+] EMBL CB680362             [TCCCTTTTTTTTTAGTTTCACAAGTCAATTAACCACGACCTATTACCCATGCAATTTGATATACAGATATTTCCTGGGAGCAGGCAACAACCATCTTGCCAAATAACACACATGCTCAATCATTCTGTAGTAAATCAGGATA TCTGTAGACAAAAAACTCAAATGCACATGCAGTTATGCACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAA CAAAAA AAAAGTAGGAGAGATTTACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAG ATTT AA AATAGTAGATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAAGAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATACTCAATCTCTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGTGAACAGCAGATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATA TGATTGTCATCCTCCCTCCATTCGATTTCGAATGGTCCACCAGGCAAATCAACTACACATTTCCGTTCAGCTCGACCCTCGAGGACAGCTGCAACAACTACTGCACAAGCACCGGTTCCACAAGCAAGCGTCGCACCAGCACCACGCTCCCAGACTCTCATTTTGAGGTGTGAGCGAGACAGGACCTCTACAAATTCTGTGTTGGTGCGGGCAGGAAACATTTCATGATGCTCGAATTTAGGCCCAATATCACTAAGCTTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGATTGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU225794             [                                                                                      gccgcttttTTGCCAAATAACACACATGCTCAATCATTCTGTAGTAAATCAGGATA TCTGTAGACAAAAAACTCAAATGCACATGCAGTTATGCACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAA CAAAAA AAAAGTAGGAGAGATTTACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAG ATTT AA AATAGTAGATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAAGAATCAAGAGGGGTTGTGCTGGTACCAAAACAgcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB649248             [                                                                                                          CACACATGCTCAATCATTCTGTAGTAAATCAGGATA TCTGTAGACAAAAAACTCAAATGCACATGCAGTTATGCACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAA CAAAAA AAAAGTAGGAGAGATTTACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAG ATTT AA AATAGTAGATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAAAAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATACTCAATCTCTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGTGAACAGCAGATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATA TGATTGTCATCCTCCCTCCATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACATTTCCGTTCAGCTCGACCCTCGAGGACAGCTGCAACAACTACTGCACAAGCACCGGTTCCACAAGCAAGCGTCGCACCAGCACCACGCTCCCAGACTCTCATTTTGAGGTGTGAGCGAGACAGGACCTCTACAAATTCTGTGTTGGTGCGGGCAGGAAACATTTCATGATGCTCGAATTTAGGCCCAATATCACTAAGCTTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGATTGCCCATGCTAACACAGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BQ909057             [                                                                                                                    ttttttTTTTGTAGTAAATCAGGATAGTCTGTAGACAAAAAACTCAAATGCACATGCAGTTATGCACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAACCAAAAANAAAAGTAGGAGAGATTTACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAGCATTTCAACAATAGTAGATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAAGAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATACTCAATCTCTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGTGAACAGCAGATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATATTGATTGTCATCCTCCCTCCATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB680361             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACATCTCATGATGCTCGAATATAGGCCCAATATCACTAAGCTTTAAATCATCAACATGCAAATCCTTGAGCTCCTCGCTGCCAAATGTGACACAATGTGGATTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAACTGCCAAATCAGCTTGGACAACGGCTTCATTCTTGGTGGATAGGCAGTATTGTTGGAATATCTGGTCCAGAGAGAATGGGCTGGCCCATATCAACCTTTACCTTGCCATCATTTTGTATTTCAGGAATGATTAGCCCAGCGCCAGTGTGAATTTTGAAGCTATGTGTTCCCTGTAGGTTTTCAAGCTCAGCTATAAACCGGGCAAAGCAACGGACTCCATTGCCACACATCTCCGGCTCACTGCCGTCCGAGCCGAAGATCCTCATGGTGTAGTCCGCGCCATTGACCCCCGGCATGACGAAGATCACACCGTCGGCGCCGACGCCGAAGTTCCTGTCGCACAGCTTCGCCGCCTCCTCCGGCGTC ACCTTCGGCACGGCCGAATCCCTATTGTCCACCATGATGAAGTCGTTCCCAAGGCCCTGGTACTTGACGAAGTGGAGGGCGCGCTCCGACTCGCGGCGCTCGAGGAACGCGGCGGCGGCGGC  CGA CCTGGGGGTGGACACGGCCATCGCGGCGACGCAGCGGCGCGCGGTGGGGTTCCCGCGGAGCGTGAGGCGGCGCCGGGAGGGcctttta                                                                               ]
[-] EMBL CB649247             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCGAATTTAGGCCCAATATCACTAAGCTTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGATTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCACCTGCCAAATCAGCTTGGACAACGGCTTCATTCTTGGTGGAT GGCAGTTTTGTTGGAATATCTGGTCCAGAGAGAATGGGCTGGCCCATATCAACCTTTACCTTGCCATCATTTTGTATTTCAGGAATGATTAGCCCAGCGCCAGTGTGAATTTTGAAGCTATGTGTTCCCTGTAGGTTTTCAAGCTCAGCTATAAACCGGGCAAAGCAACGGACTCCATTGCCACACATCTCCGGCTCACTGCCGTCCGAGTTGAAGATCCTCATGGTGTAGTCCGCGCCATTGACCCCCGGCATGACGAAGATCACACCGTCGGCGCCGACGCCGAAGTTCCTGTCGCACAGCTTCGCCGCCTCCTCCGGCGTC ACCTTCGGCACGGCCGAATCCCTATTGTCCACCATGATGAAGTCGTTCCCAAGGCCCTGGTACTTGACGAAGTGGAGGGCGCGCTCCGACTCGCGGCGCTCGAGGAACGCGGCGGCGGCGGC  CGA CCTGGGGGTGGACACGGCCATCGCGGCGACGCAGCGGCGCGCGGTGGGGTTCCCGCGGAGCGTGAGGCGGCGCCGGGAGGGGGCGGGGGCGGGGGTGGCGGCGAGCTTCGCGGCGGCGGCGGCGATGGTGGCGGTGGCGGCGGCGGTGGCGGACG            ]
[-] EMBL BP184762             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TATCACTAAGCTTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGATTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAACTGCCAAATCAGCTTGGACAACGGCTTCATTCTTGGTGGAT GGCAGTTTTGTTGGAATATCTGGTCCAGAGAGAATGGGCTGGCCCATATCAACCTTTACCTTGCCATCATTTTGTATTTCAGGAATGATTAGCCCAGCGCCAGTGTGAATTTTGAAGCTATGTGTTCCCTGTAGGTTTTCAAGCTCAGCTATAAACCGGGCAAAGCAACGGACTCCATTGCCACACATCTCCGGCTCACTGCCGTCCGAGTTGAAGATCCTCATGGTGTAGTCCGCGCCATTGACCCCCGGCATGACGAAGATCACACCGTCGGCGCCGACGCCGAAGTTCCTGTCGCACAGCTTCGCCGCCTCCTCCGGCGTC ACCTTCGGCACGGCCGAATCCCTATTGTCCACCATGATGAAGTCGTTCCCAAGGCCCTGGTACTTGACGAAGTGGAGGGCGCGCTCCGACTCGCGGCGCTCGAGGAACGCGGCGGCGGCGGCGGCGATGGTGGCGGTGGCGGCGGCGGTGGCGGacg                                                                                                                                          ]
[-] EMBL CB654494             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAACTGCCAAATCAGCTTGGACAACGGCTTCATTCTTGGTGGAT GGCAGTTTTGTTGGAATATCTGGTCCAGAGAGAATGGGCTGGCCCATATCAACCTTTACCTTGCCATCATTTTGTATTTCAGGAATGATTAGCCCAGCGCCAGTGTGAATTTTGAAGCTATGTGTTCCCTGTAGGTTTTCAAGCTCAGCTATAAACCGGGCAAAGCAACGGACTCCATTGCCACACATCTCCGGCTCACTGCCGTCCGAGTTGAAGATCCTCATGGTGTAGTCCGCGCCATTGACCCCCGGCATGACGAAGATCACACCGTCGGCGCCGACGCCGAAGTTCCTGTCGCACAGCTTCGCCGCCTCCTCCGGCGTC ACCTTCGGCACGGCCGAATCCCTATTGTCCACCATGATGAAGTCGTTCCCAAGGCCCTGGTACTTGACGAAGTGGAGGGCGCGCTCCGACTCGCGGCGCTCGAGGAACGCGGCGGCGGCGGC  CGA CCTGGGGGTGGACACGGCCATCGCGGCGACGCAGCGGCGCGCGGTGGGGTTCCCGCGGAGCGTGAGGCGGCGCCGGGAGGGGGCGGGGGCGGGGGTGGCGGCGAGCTTCGCGGCGGCGGCGGCGATGGTGGCGGTGGCGGCGGCGGTGGCGGA              ]
[-] EMBL CF304480             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTGGACAACGGCTTCATTCTTGGTGGAT GGCAGTTTTGTTGGAATATCTGGTCCAGAGAGAATGGGCTGGCCCATATCAACCTTTACCTTGCCATCATTTTGTATTTCAGGAATGATTAGCCCAGCGCCAGTGTGAATTTTGAAGCTATGTGTTCCCTGTAGGTTTTCAAGCTCAGCTATAAACCGGGCAAAGCAACGGACTCCATTGCCACACATCTCCGGCTCACTGCCGTCCGAGTTGAAGATCCTCATGGTGTAGTCCGCGCCATTGACCCCCGGCATGACGAAGATCACACCGTCGGCGCCGACGCCGAAGTTC                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CF324078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGCAGTTTTGTTGGAATATCTGGTCCAGAGAGAATGGGCTGGCCCATATCAACCTTTACCTTGCCATCATTTTGTATTTCAGGAATGATTAGCCCAGCGCCAGTGTGAATTTTGAAGCTATGTGTTCCCTGTAGGTTTTCAAGCTCAGCTATAAACCGGGCAAAGCAACGGACTCCATTGCCACACATCTCCGGCTCACTGCCGTCCGAGTTGAAGATCCTCATGGTGTAGTCCGCGCCATTGACCCCCGGCATGACGAAGATCACACCGTCGGCGCCGACGCCGAAGTTCCTGTCGCACAGCTTCGCCGCCTCCTCCGGCGTC ACCTTCGGCACGGCCGAATCCCTATTGTCCACCATGATGAAGTCGTTCCCAAGGCCCTGGTACTTGACGAAGTGGAGGGCGCGCTCCGACTCGCGGCGCTCGAGGAACGCGGCGGCGGCGGC  CGA CCTGGGGGTGGACACGGCCATCGCGGCGACGCAGCGGCGCGCGGTGGGGTT                                                                                                                    ]
[-] EMBL AU164318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCGCCGCCTCTTCCGGCNTCAACCTTC GAACGNCCGAATCCCTATTGTCCACCATGATGAAGTCGTTCCCAAGGCCCTGGTACTTNACGAAGTGGAGGGCGCGCTCCAACTNGCGGCGCTCGAGGAACGCGGCGGCGGCGGC  CGA CCTGGGGGTGGACACGGCCATCGCGGCGACGCAGCGGCGCGCGGTGGGGTTCCC CGGAGCGTGAGGCGGCGCCGGGAGGGGGCGGGNGCGGGGGTGGCGGCGA NTTCGCGGCGGCGGCGGCGATGGTGGCGGTGGCGGCGGCGGTGGCGGACGACATGGCGGCGA]


>consensus_13666#0 TCCCTTTTTTTTTAGTTTCACAAGTCAATTAACCACGACCTATTACCCATGCAATTTGAT ATACAGATATTTCCTGGGAGCAGGCAACAACCATCTTGCCAAATAACACACATGCTCAAT CATTCTGTAGTAAATCAGGATATCTGTAGACAAAAAACTCAAATGCACATGCAGTTATGC ACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAACAAAAAAAAAGTAGGAGAGATTT ACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAGATTTAAAATAGTA GATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAA GAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATACTCAATCT CTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGTGAACAGCA GATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATATGATTGTCATCCTCCCTC CATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACATTTCCGTTCAGCTCGACCC TCGAGGACAGCTGCAACAACTACTGCACAAGCACCGGTTCCACAAGCAAGCGTCGCACCA GCACCACGCTCCCAGACTCTCATTTTGAGGTGTGAGCGAGACAGGACCTCTACAAATTCT GTGTTGGTGCGGGCAGGAAACATTTCATGATGCTCGAATTTAGGCCCAATATCACTAAGC TTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGA TTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAACTGCCAAATCAGCTTGG ACAACGGCTTCATTCTTGGTGGATGGCAGTTTTGTTGGAATATCTGGTCCAGAGAGAATG GGCTGGCCCATATCAACCTTTACCTTGCCATCATTTTGTATTTCAGGAATGATTAGCCCA GCGCCAGTGTGAATTTTGAAGCTATGTGTTCCCTGTAGGTTTTCAAGCTCAGCTATAAAC CGGGCAAAGCAACGGACTCCATTGCCACACATCTCCGGCTCACTGCCGTCCGAGTTGAAG ATCCTCATGGTGTAGTCCGCGCCATTGACCCCCGGCATGACGAAGATCACACCGTCGGCG CCGACGCCGAAGTTCCTGTCGCACAGCTTCGCCGCCTCCTCCGGCGTCACCTTCGGCACG GCCGAATCCCTATTGTCCACCATGATGAAGTCGTTCCCAAGGCCCTGGTACTTGACGAAG TGGAGGGCGCGCTCCGACTCGCGGCGCTCGAGGAACGCGGCGGCGGCGGCCGACCTGGGG GTGGACACGGCCATCGCGGCGACGCAGCGGCGCGCGGTGGGGTTCCCGCGGAGCGTGAGG CGGCGCCGGGAGGGGGCGGGGGCGGGGGTGGCGGCGAGCTTCGCGGCGGCGGCGGCGATG GTGGCGGTGGCGGCGGCGGTGGCGGACGACATGGCGGCGA



consensusID : consensus_13666#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 772
fasta sequence
                              [TCCTTTTATTTTCTGTAGTAAATCAGGATATCTGTAGACAAAACTTTCAAATGCACATGCAGTTATGCACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAACAAAAAAAAAGTAGGAGAGATTTACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAGATTTAAAATAGTAGATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAAGAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATACTCAATCTCTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGTGAACAGCAGATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATATGATTGTCATCCTCCCTCCATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACATTTCCGTTCAGCTCGACCCTCGAGGACAGCTGCAACAACTACTGCACAAGCACCGGTTCCACAAGCAAGCGTCGCACCAGCACCACGCTCCCAGACTCTCATTTTGAGGTGTGAGCGAGACAGGACCTCTACAAATTCTGTGTTGGTGCGGGCAGGAAACATTTCATGATGCTCGAATTTAGGCCCAATATCACTAAGCTTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGATTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAAC]

[+] EMBL CB654495             [TCCTTTTATTTTCTGTAGTAAATCAGGATATCTGTAGACAAAACTTTCAAATGCACATGCAGTTATGCACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAACAAAAAAAAAGTAGGAGAGATTTACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAGATTTAAAATAGTAGATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAAGAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATACTCAATCTCTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGTGAACAGCAGATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATATGATTGTCATCCTCCCTCCATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACATTTCCGTTCAGCTCGACCCTCGAGGACAGCTGCAACAACTACTGCACAAGCACCGGTTCCACAAGCAAGCGTCGCACCAGCACCACGCTCCCAGACTCTCATTTTGAGGTGTGAGCGAGACAGGACCTCTACAAATTCTGTGTTGGTGCGGGCAGGAAACATTTCATGATGCTCGAATTTAGGCCCAATATCACTAAGCTTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGATTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAAC]
[+] EMBL AW070048             [                                                                                                                                                                                                                                                                                                                                                                         AACAGCAGATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATATGATTGTCATCCTCCCTCCATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACGTTTCCGTTCACCTCGgc                                                                                                                                                                                                                                                                                              ]


>consensus_13666#1 TCCTTTTATTTTCTGTAGTAAATCAGGATATCTGTAGACAAAACTTTCAAATGCACATGC AGTTATGCACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAACAAAAAAAAAGTAGG AGAGATTTACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAGATTTA AAATAGTAGATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGC GCAATTAAGAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATA CTCAATCTCTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGT GAACAGCAGATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATATGATTGTCAT CCTCCCTCCATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACATTTCCGTTCAG CTCGACCCTCGAGGACAGCTGCAACAACTACTGCACAAGCACCGGTTCCACAAGCAAGCG TCGCACCAGCACCACGCTCCCAGACTCTCATTTTGAGGTGTGAGCGAGACAGGACCTCTA CAAATTCTGTGTTGGTGCGGGCAGGAAACATTTCATGATGCTCGAATTTAGGCCCAATAT CACTAAGCTTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACAC AATGTGGATTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13666#0      TCCCTTTTTTTTTAGTTTCACAAGTCAATTAACCACGACCTATTACCCATGCAATTTGAT 60
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      ATACAGATATTTCCTGGGAGCAGGCAACAACCATCTTGCCAAATAACACACATGCTCAAT 120
consensus_13666#1      ----------------------------------------------------TCCTTTTA 8
                                                                           * **    

consensus_13666#0      CATTCTGTAGTAAATCAGGATATCTGTAGACAAAAAACTCAAATGCACATGCAGTTATGC 180
consensus_13666#1      TTTTCTGTAGTAAATCAGGATATCTGTAGACAAAACTTTCAAATGCACATGCAGTTATGC 68
                         *********************************   **********************

consensus_13666#0      ACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAACAAAAAAAAAGTAGGAGAGATTT 240
consensus_13666#1      ACTTAAGACAGCAAGGGTTTATTGCCAAAGGAAGGAACAAAAAAAAAGTAGGAGAGATTT 128
                       ************************************************************

consensus_13666#0      ACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAGATTTAAAATAGTA 300
consensus_13666#1      ACTACCAATATAGGGTTCAAACCTGACAAACTAAAGAAGCAGAAAAGATTTAAAATAGTA 188
                       ************************************************************

consensus_13666#0      GATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAA 360
consensus_13666#1      GATTTGTTTGAAAGAACCCCGTAATTCTGCCCATAGTAAGCAGGCCACAGGCGCAATTAA 248
                       ************************************************************

consensus_13666#0      GAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATACTCAATCT 420
consensus_13666#1      GAATCAAGAGGGGTTGTGCTGGTACCAAAACACCAATTTGATAGACCTTATACTCAATCT 308
                       ************************************************************

consensus_13666#0      CTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGTGAACAGCA 480
consensus_13666#1      CTCAGGCTCCCAGTTGCGGTAAACTTTTCCAGCTTGGTCCCTGGTACCTAGTGAACAGCA 368
                       ************************************************************

consensus_13666#0      GATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATATGATTGTCATCCTCCCTC 540
consensus_13666#1      GATCCATAGAAGACAGCCTCTGCAGGACCAGTCATGTAAATATGATTGTCATCCTCCCTC 428
                       ************************************************************

consensus_13666#0      CATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACATTTCCGTTCAGCTCGACCC 600
consensus_13666#1      CATTCGATTTCCAATGGTCCACCAGGCAAATCAACTACACATTTCCGTTCAGCTCGACCC 488
                       ************************************************************

consensus_13666#0      TCGAGGACAGCTGCAACAACTACTGCACAAGCACCGGTTCCACAAGCAAGCGTCGCACCA 660
consensus_13666#1      TCGAGGACAGCTGCAACAACTACTGCACAAGCACCGGTTCCACAAGCAAGCGTCGCACCA 548
                       ************************************************************

consensus_13666#0      GCACCACGCTCCCAGACTCTCATTTTGAGGTGTGAGCGAGACAGGACCTCTACAAATTCT 720
consensus_13666#1      GCACCACGCTCCCAGACTCTCATTTTGAGGTGTGAGCGAGACAGGACCTCTACAAATTCT 608
                       ************************************************************

consensus_13666#0      GTGTTGGTGCGGGCAGGAAACATTTCATGATGCTCGAATTTAGGCCCAATATCACTAAGC 780
consensus_13666#1      GTGTTGGTGCGGGCAGGAAACATTTCATGATGCTCGAATTTAGGCCCAATATCACTAAGC 668
                       ************************************************************

consensus_13666#0      TTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGA 840
consensus_13666#1      TTTAAATCATCAACATGCAAAACCTTGAGCTCCTTTGTGCCAAATGTGACACAATGTGGA 728
                       ************************************************************

consensus_13666#0      TTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAACTGCCAAATCAGCTTGG 900
consensus_13666#1      TTGCCCATGCTAACACAGGTTACTTGCCATGTTGAGCCATCAAC---------------- 772
                       ********************************************                

consensus_13666#0      ACAACGGCTTCATTCTTGGTGGATGGCAGTTTTGTTGGAATATCTGGTCCAGAGAGAATG 960
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      GGCTGGCCCATATCAACCTTTACCTTGCCATCATTTTGTATTTCAGGAATGATTAGCCCA 1020
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      GCGCCAGTGTGAATTTTGAAGCTATGTGTTCCCTGTAGGTTTTCAAGCTCAGCTATAAAC 1080
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      CGGGCAAAGCAACGGACTCCATTGCCACACATCTCCGGCTCACTGCCGTCCGAGTTGAAG 1140
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      ATCCTCATGGTGTAGTCCGCGCCATTGACCCCCGGCATGACGAAGATCACACCGTCGGCG 1200
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      CCGACGCCGAAGTTCCTGTCGCACAGCTTCGCCGCCTCCTCCGGCGTCACCTTCGGCACG 1260
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      GCCGAATCCCTATTGTCCACCATGATGAAGTCGTTCCCAAGGCCCTGGTACTTGACGAAG 1320
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      TGGAGGGCGCGCTCCGACTCGCGGCGCTCGAGGAACGCGGCGGCGGCGGCCGACCTGGGG 1380
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      GTGGACACGGCCATCGCGGCGACGCAGCGGCGCGCGGTGGGGTTCCCGCGGAGCGTGAGG 1440
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      CGGCGCCGGGAGGGGGCGGGGGCGGGGGTGGCGGCGAGCTTCGCGGCGGCGGCGGCGATG 1500
consensus_13666#1      ------------------------------------------------------------
                                                                                   

consensus_13666#0      GTGGCGGTGGCGGCGGCGGTGGCGGACGACATGGCGGCGA 1540
consensus_13666#1      ----------------------------------------
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)