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Oryza sativa
cluster # 13674 cluster # 13674       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13674#0 length = 1356 sequences # 10  
consensus_13674#1 length = 639 sequences # 3  

consensusID : consensus_13674#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1356
fasta sequence
                              [AACAGCCACATTCATTAACAACAACCATGAGGGGTAGAGTGAAGGATAGTGGTGTTCTTTTAGGAGGATTAAAGGAAAAGGAGTACCTCAAAACTATTAGGCGCAGTAGAAGGTTAGTTTTCATTGGCTGTGGTACAAGTTACAATGCTGCCTTGGCTGCAAGACCTTTTGTGGAGGAATTAACTGGTATTCCTGTGACTATGGAGGTTGCAAGTGACTTGCTGGAC-AGACAAGGTCCCATCTACAGGGAAGACACTGCAGTTTTCGTTAGCCAGTCAGGGGAGACAGCAGATACCCTCCTTGCTCTTGATTATGCACTAGAAAATGGAGCACTTTGTGTTGGCATAACAAATACCGTAGGAAGCACACTATCAAGAAGAACA-CATTGTGGAGTTCATATCAATG-CTGGTTGTGAGA-TAGGTGTTGCTAGTACCAAGGCATATACAAGTCAAATAGTAGTCATGGTG-ATGGTGG-CCTTGGCTGTT-GGATCTGATCAAATATCCACCCAAGTTAGACGTCAAGCTATCATCAGTGGTCTTTCCAATCTTCCAAGCAATGTCAGCGAGGTTTTAAAACTTGATACCGAGATGAAGGAACTTTCCTCTTCCTTGATCGATTCAGAGTCTCTCCTTGTGTTTGGCAGAGGTTATAACTATGCCACTGCCTTAGAGGGTGCTCTTAAAGTTAAGGAGGTTGCTCTGATGCACAGCGAAGG-CATGCTTGCTGGTGAAATGAAGCATGGACCACTTGCACTAGTGGATGAAAACCTTCCGATCATCGTCATTGCTACACGTG-ATGCGTGCTTCAGCAAGCAGCAATCAGTGATTCAGCAGCTCCTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCCGTTTGCCCTAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTATC--A------T---A----AG---TTGTATCAGATCCAATAGAGTTCAGACGTTGTATCAAATCCATCCTATAGAGAATAGGTTGTGTAGCTATTGATTGAATGTTATTACTCATAGCCATTTCGCAGTTATGTAATTATTTTTAG---A---TAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCATCAATTTTTCATGTCTGTGTTTGTCCTGACTGATGATGCATTGACTCGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF309358             [AACAGCCACATTCATTAACAACAACCATGAGGGGTAGAGTGAAGGATAGTGGTGTTCTTTTAGGAGGATTAAAGGAAAAGGAGTACCTCAAAACTATTAGGCGCAGTAGAAGGTTAGTTTTCATTGGCTGTGGTACAAGTTACAATGCTGCCTTGGCTGCAAGACCTTTTGTGGAGGAATTAACTGGTATTCCTGTGACTATGGAGGTTGCAAGTGACTTGCTGGAC AGACAAGGTCCCATCTACAGGGAAGACACTGCATTTTTCGTTAGCCAGTCAGGGGAGACAGCAGATACCCTCCTTGCTCTTGATTATGCACTAGAAAATGGAGCACTTTGTGTTGGCATAACAAATACCGTAGGAAGCACACTGTCAAGAAGAACANCATTGTGGAGTTCATATCAATGNCTGGTTGTGAGATTAGGTGTTGCTAGTACGAAGGCATATACAAGTCAAATAGTAGTCATGGTGAATGGTGG CCTTGGCTGTTGGGATCTGATCAAATATCCACCCAAGTTAGACGTCAAGCTATCATCAGTGGTCTTTCCAATCTTCCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF306414             [                                                                           AAAAGGAGTACCTCAAAACTATTAGGCGCAGTAGAAGGTTAGTTTTCATTGGCTGTGGTACAAGTTACAATGCTGCCTTGGCTGCAATACCTTTTGTGGAGGAATTAACTGGTATTCCTGTGACTATGGAGGTTGCAAGTTTTTTGCTGGACTAGACAAGGTCCCATCTACAGGGAAGACACTGCATTTTTCGTTAGCCAGTCAGGGGAGACAGCATATACCCTCCTTGCTCTTGATTATGCACTATAAAATGGAGCACTTTGTGTTGACATAACAAATACCGTAGGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF306416             [                                                                           AAAAGGAGTACCTCAAAACTATTAGGCGCAGTAGAAGGTTAGTTTTCATTGGCTGTGGTACAAGTTACAATGCTGCCTTGGCTGCAAGACCTTTTGTGGAGGAATTAACTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU095200             [                                                                                  GTACCTCAAAACTATTAGGCGCAGTAGAAGGTTAGTTTTCATTGGCTGTGGTACAAGTTACAATGCTGCCTTGGCTGCAAGACCTTTTGTGGAGGAATTAACTGGTATTCCTGTGACTATGGAGGTTGCAAGTGACTTGCTGGAC AGACAAGGTCCCATCTACAGGGAAGACACTGCAGTTTTCGTTAGCCAGTCAGGGGAGACAGCAGATACCCTCCTTGCTCTTGATTATGCACTAGAAAATGGAGCACTTTGTGTTGGCATAACAAATACCGTAGGAAGCACACTATCAAGAAGAACA CATTGTGGAGTTCATATCAATG CTGGNTGTGAAA TAGGTGTTGCTAGTACCAAGGCATATACAAGTCCAATAGTAGTCATGGTG ATGGTGGCCCTTGGCTGTT GGATCTGATCNAAT TCCACCCCAGTTAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK105856             [                                                                                                           AGAAGGTTAGTTTTCATTGGCTGTGGTACAAGTTACAATGCTGCCTTGGCTGCAAGACCTTTTGTGGAGGAATTAACTGGTATTCCTGTGACTATGGAGGTTGCAAGTGACTTGCTGGAC AGACAAGGTCCCATCTACAGGGAAGACACTGCAGTTTTCGTTAGCCAGTCAGGGGAGACAGCAGATACCCTCCTTGCTCTTGATTATGCACTAGAAAATGGAGCACTTTGTGTTGGCATAACAAATACCGTAGGAAGCACACTATCAAGAAGAACA CATTGTGGAGTTCATATCAATG CTGGTTGTGAGA TAGGTGTTGCTAGTACCAAGGCATATACAAGTCAAATAGTAGTCATGGTG ATGGTGG CCTTGGCTGTT GGATCTGATCAAATATCCACCCAAGTTAGACGTCAAGCTATCATCAGTGGTCTTTCCAATCTTCCAAGCAATGTCAGCGAGGTTTTAAAACTTGATACCGAGATGAAGGAACTTTCCTCTTCCTTGATCGATTCAGAGTCTCTCCTTGTGTTTGGCAGAGGTTATAACTATGCCACTGCCTTAGAGGGTGCTCTTAAAGTTAAGGAGGTTGCACTGATGCACAGCGAAGG CATGCTTGCTGGTGAAATGAAGCATGGACCACTTGCACTAGTGGATGAAAACCTTCCGATCATCGTCATTGCTACACGTG ATGCGTGCTTCAGCAAGCAACAGTCAGTGATTCAGCAGCTCCTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCAGTTTGCCCTAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTATC  A      T   A    AG   TTGTATCAGATCCAATAGAGATCAGACGTTGTATCAAATCCATCCTATAGAGAATAGGTTGTGTAGCTATTGATTGAATGTTATTACTCATAGCCATTTCGCAGTTATGTAATTATTTTTAG   A   TAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCATCAATTTTTCATGTCTGTGTTTGTCCTGACTGATGATGCAT                                                            ]
[+] EMBL CF323341             [                                                                                                                                                                                                                              TGGAC AGACAAGGTCCCATCTACAGGGAAGACACTGCAGTTTTCGTTAGCCAGTCAGGGGAGACAGCAGATACCCTCCTTGCTCTTGATTATGCACTAGAAAATGGAGCACTTTGTGTTGGCATAACAAATACCGTAGGAAGCACACTATCAAGAAGAACA CATTGTGGAGTTCATATCAATG CTGGTTGTGAGA TAGGTGTTGCTAGTACCAAGGCATATACAAGTCAAATAGTAGTCATGGTG ATGGTGG CCTTGGCTGTT GGATCTGATCAAATATCCACCCAAGTTAGACGTCAAGCTATCATCAGTGGTCTTTCCAATCTTCCAAGCAATGTCAGCGAGGTTTTAAAACTTGATACCGAGATGAAGGAACTTTCCTCTTCCTTGATCGATTCAGAGTCTCTCCTTGTGTTTGGCAGAGGTTATAACTATGCCACTGCCTTAGAGGGTGCTCTTAAAGTTAAGGAGGTTGCTCTGATGCACAGCGAAGG CATGCTTGCTGGTGAAATGAAGCATGGACCACTTGCACTAGTGGATGAAAACCTTCCGATCATCGTCATTGCTACACGTGNATGCGTGCTTCAGCAAGCAACAGTCAGTGATTCAGCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA766086             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAGTCAAATAGTAGTCCTGGTG ATGGTGG CCTTGGCTGTT GGATCTGATCAAATATCCACCCAAGTTAGACGTCAAGCTATCATCAGTGGTCTTTCCAATCTTCCAAGCAATGTCAGCGAGGTTTTAAAACTTGATACTGAGATGAAGGAACTTGCCTCTTCCTTGATCGATTCAGAGTCTCTCCTTGTGTTTGGCAGAGGTTATAACTATGCCACTGCCTTAGAGGGTGCTCTTAAAGTTAAGGAGGTTGCTCTGATGCACAGCGAAGG CATGCTTGCTGGTGAAATGAAGCATGGACCACTTGCACTAGTGGATGAAAACCTTCCGATCATCGTCATTGCTACACGTG ATGCGTGCTTCAGCAAGCAGCAATCAGTGATTCAGCAGCTCCTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCCGTTTGCCCTAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTATCAGA      T   AGTTCAGAAATTGTATCAGATCCAATAGAGTTCAGACGTTGTATCAAATCCATCCTATAGAGAATAGGNTGNGTAGCTATTGGTTGAATGGTATTACTCATAGCCATTTCACAGNTATGTAANTATTTTTAG   ATAGTAACTGAGAT                                                                                                                                              ]
[+] EMBL CF317475             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACGTCAAGCTATCATCAGTGGTCTTTCCAATCTTCCAAGCAATGTCAGCGAGGTTTTCAAACTTGATACTGAGATGAAGGAACTTGCCTCTTCCTTGATCGATTCAGAGTCTCTCCTTGTGTTTGGCAGAGGTTATAACTATGCCACTGCCTTAGAGGGTGCTCTTAAAGTTAAGGAGGTTGCTCTGATGCACAGCGAAGG CATGCTTGCTGGTGAAATGAAGCATGGACCACTTGCACTAGTGGATGAAAACCTTCCGATCATCGTCATTGCTACACGTG ATGCGTGCTTCAGCAAGCAGCAATCAGTGATTCAGCAGCTCCTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCCGTTTGCCCTAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACT                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CF309359             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAGTCTCTCCTTGTGTTTGGCAGAGGTTATAACTATGCCACTGCTTTAGAGGGTGCTCTTAAAGTTAAGGAGGTTGCTCTGATGCACAGCGAAGGCCATGCTTGCTGGTGAAATGAAGCATGGACCACTTGCACTAGTGGATGAAAACCTTCCGATCATCGTCATTGCTACACGTG ATGCGTGCTTCAGCAAGCAGCAATCAGTGATTCAGCAGCTCCTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCCGTTTGCCCTAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTATC  AGATAGTTCAGA    AG   TTGTATCAGATCCAATAGAGTTCAGACGTTGTATCAAATCCATCCTATAGAGAATAGGTTGTGTAGCTATTGTTTGAATGTTATTACTCATAGCCATTTCACAGTTATGTAATTATTTTTAGATAA   TAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCATCAATTTTTCATaaaa                                                                                     ]
[+] EMBL CF309378             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAATCCATCCTATAGAGAATAGTTTGTGTAGCTATTGATTGAATGTTATTACTCATAGCCATTTCGCAGTTATGTAATTATTTTTAG   A   TAACTGAGATTCTTTAGGTGGCTAGCATTACAATATTGTTGATGAACTCCATCAATTTTTCATGTCTGTGTTTGTCCTGACTGATGATGCATTGACTCGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13674#0 AACAGCCACATTCATTAACAACAACCATGAGGGGTAGAGTGAAGGATAGTGGTGTTCTTT TAGGAGGATTAAAGGAAAAGGAGTACCTCAAAACTATTAGGCGCAGTAGAAGGTTAGTTT TCATTGGCTGTGGTACAAGTTACAATGCTGCCTTGGCTGCAAGACCTTTTGTGGAGGAAT TAACTGGTATTCCTGTGACTATGGAGGTTGCAAGTGACTTGCTGGACAGACAAGGTCCCA TCTACAGGGAAGACACTGCAGTTTTCGTTAGCCAGTCAGGGGAGACAGCAGATACCCTCC TTGCTCTTGATTATGCACTAGAAAATGGAGCACTTTGTGTTGGCATAACAAATACCGTAG GAAGCACACTATCAAGAAGAACACATTGTGGAGTTCATATCAATGCTGGTTGTGAGATAG GTGTTGCTAGTACCAAGGCATATACAAGTCAAATAGTAGTCATGGTGATGGTGGCCTTGG CTGTTGGATCTGATCAAATATCCACCCAAGTTAGACGTCAAGCTATCATCAGTGGTCTTT CCAATCTTCCAAGCAATGTCAGCGAGGTTTTAAAACTTGATACCGAGATGAAGGAACTTT CCTCTTCCTTGATCGATTCAGAGTCTCTCCTTGTGTTTGGCAGAGGTTATAACTATGCCA CTGCCTTAGAGGGTGCTCTTAAAGTTAAGGAGGTTGCTCTGATGCACAGCGAAGGCATGC TTGCTGGTGAAATGAAGCATGGACCACTTGCACTAGTGGATGAAAACCTTCCGATCATCG TCATTGCTACACGTGATGCGTGCTTCAGCAAGCAGCAATCAGTGATTCAGCAGCTCCTTT CTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCCGTTTGCCCTA GTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTA ACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTG ATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTATCATAA GTTGTATCAGATCCAATAGAGTTCAGACGTTGTATCAAATCCATCCTATAGAGAATAGGT TGTGTAGCTATTGATTGAATGTTATTACTCATAGCCATTTCGCAGTTATGTAATTATTTT TAGATAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCATCAAT TTTTCATGTCTGTGTTTGTCCTGACTGATGATGCATTGACTCGCTGAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13674#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 639
fasta sequence
                              [TTAGAGGGTGCTCTTAAAGTTAAGGNAGGTTGCCTCTGATTGCACAGCGAAGGCATGCTTGCTGGTGAANTGAAGCATGGACCACTTGCCACTAGTGGATGAAAACTTCCGATCATCGTCATTGCTACACGTGATGCGTGCTTCAGCAAGCAACAGTCAGTGATTCAGCAGCTCCTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCAGTTTGCCCCTAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTATCA------T---AAGTTGTATCAGATCCAATAGAGATCAGACGTTGTATCAAATCCATCCTATAGAGAATAGGTTGTGTAGCTATTGTT-TGAATGTTATTACT-CATAGCCATTTCGCAGT-TATGTAATTATTTTTAG---ATAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCATCAATTTTTCAAA-----AAAAAAAAAAAAAAAAAAAACTGCCATGCCGT]

[+] EMBL AU031029             [TTAGAGGGTGCTCTTAAAGTTAAGGNAGGTTGCCTCTGATTGCACAGCGAAGGCATGCTTGCTGGTGAANTGAAGCATGGACCACTTGCCACTAGTGGATGAAAACTTCCGATCATCGTCATTGCTACACGTGATGCGTGCTTCAGCAAGCAACAGTCAGTGATTCAGCAGCTCCTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCAGTTTGCCCCTAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTATCA      T   AAGTTGTATCAGATCCAATAGAGATCAGACGTTGTATCAAATCCATCCTATAGAGAATAGGTTGTGTAGCTATTGAT TGAATGTTATTACT CATAGCCATTTCGCAGT TATGTAATTATTTTTAG   ATAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCATCAATTTTTCAAA     AAAAAAAAAAAAAAAAAAA             ]
[-] EMBL CF336942             [                                                                                                                                ACGTGATGCGTGCTTCAGCAAGCAGCAATCAGTGATTCAGCAGCTCCTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCCGTTTG CCCTAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTATCAGATAGTTCAGAAGTTGTATCAGATCCAATAGAGTTCAGACGTTGTATCAAATCCATCCTATAGAGAATAGGTTGTGTAGCTATTGTT TGAATGTTATTACT CACAGCCATTTCACAGT TATGTAATTATTTTTAGATAATAACTGAGATCCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCATCAATTTTTCATATCTGTAAAAAAAAAAAAAAAAAACACTGCCATGCCGT]
[-] EMBL CB966708             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTTNTGAATGTTATTACTACATAGCCATTTCGCAGTATATGTAATTATTTTTAG   ATAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCAT                                                 ]


>consensus_13674#1 TTAGAGGGTGCTCTTAAAGTTAAGGNAGGTTGCCTCTGATTGCACAGCGAAGGCATGCTT GCTGGTGAANTGAAGCATGGACCACTTGCCACTAGTGGATGAAAACTTCCGATCATCGTC ATTGCTACACGTGATGCGTGCTTCAGCAAGCAACAGTCAGTGATTCAGCAGCTCCTTTCT CGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCAGTTTGCCCCTAG TGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGTGATTAA CATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGATGTTGA TCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTATCATAAG TTGTATCAGATCCAATAGAGATCAGACGTTGTATCAAATCCATCCTATAGAGAATAGGTT GTGTAGCTATTGTTTGAATGTTATTACTCATAGCCATTTCGCAGTTATGTAATTATTTTT AGATAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCATCAATT TTTCAAAAAAAAAAAAAAAAAAAAAAACTGCCATGCCGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13674#0      AACAGCCACATTCATTAACAACAACCATGAGGGGTAGAGTGAAGGATAGTGGTGTTCTTT 60
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      TAGGAGGATTAAAGGAAAAGGAGTACCTCAAAACTATTAGGCGCAGTAGAAGGTTAGTTT 120
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      TCATTGGCTGTGGTACAAGTTACAATGCTGCCTTGGCTGCAAGACCTTTTGTGGAGGAAT 180
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      TAACTGGTATTCCTGTGACTATGGAGGTTGCAAGTGACTTGCTGGACAGACAAGGTCCCA 240
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      TCTACAGGGAAGACACTGCAGTTTTCGTTAGCCAGTCAGGGGAGACAGCAGATACCCTCC 300
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      TTGCTCTTGATTATGCACTAGAAAATGGAGCACTTTGTGTTGGCATAACAAATACCGTAG 360
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      GAAGCACACTATCAAGAAGAACACATTGTGGAGTTCATATCAATGCTGGTTGTGAGATAG 420
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      GTGTTGCTAGTACCAAGGCATATACAAGTCAAATAGTAGTCATGGTGATGGTGGCCTTGG 480
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      CTGTTGGATCTGATCAAATATCCACCCAAGTTAGACGTCAAGCTATCATCAGTGGTCTTT 540
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      CCAATCTTCCAAGCAATGTCAGCGAGGTTTTAAAACTTGATACCGAGATGAAGGAACTTT 600
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      CCTCTTCCTTGATCGATTCAGAGTCTCTCCTTGTGTTTGGCAGAGGTTATAACTATGCCA 660
consensus_13674#1      ------------------------------------------------------------
                                                                                   

consensus_13674#0      CTGCCTTAGAGGGTGCTCTTAAAGTTAAGGA-GGTTGC-TCTGAT-GCACAGCGAAGGCA 717
consensus_13674#1      -----TTAGAGGGTGCTCTTAAAGTTAAGGNAGGTTGCCTCTGATTGCACAGCGAAGGCA 55
                            *************************  ****** ****** **************

consensus_13674#0      TGCTTGCTGGTGAAATGAAGCATGGACCACTTGC-ACTAGTGGATGAAAACCTTCCGATC 776
consensus_13674#1      TGCTTGCTGGTGAANTGAAGCATGGACCACTTGCCACTAGTGGATGAAAAC-TTCCGATC 114
                       ************** ******************* **************** ********

consensus_13674#0      ATCGTCATTGCTACACGTGATGCGTGCTTCAGCAAGCAGCAATCAGTGATTCAGCAGCTC 836
consensus_13674#1      ATCGTCATTGCTACACGTGATGCGTGCTTCAGCAAGCAACAGTCAGTGATTCAGCAGCTC 174
                       ************************************** ** ******************

consensus_13674#0      CTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCCGTTTGC 896
consensus_13674#1      CTTTCTCGCAAGGGGCGTCTGATAGTGATGTGCTCAAAGGGAGACGCATCTGCAGTTTGC 234
                       ***************************************************** ******

consensus_13674#0      CC-TAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGT 955
consensus_13674#1      CCCTAGTGGATCTTGCAGGGTTATTGAAGTTCCAGAGGTCGCTGACTGTCTCCAGCCAGT 294
                       ** *********************************************************

consensus_13674#0      GATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGA 1015
consensus_13674#1      GATTAACATAATTCCGTTACAGCTGCTCGCATACCATCTGACAGTTCTTCGAGGATTTGA 354
                       ************************************************************

consensus_13674#0      TGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTAT 1075
consensus_13674#1      TGTTGATCAACCAAGGAATCTGGCAAAGAGTGTGACTACCCAATGAGTAGGGGGTTCTAT 414
                       ************************************************************

consensus_13674#0      CATAAGTTGTATCAGATCCAATAGAGTTCAGACGTTGTATCAAATCCATCCTATAGAGAA 1135
consensus_13674#1      CATAAGTTGTATCAGATCCAATAGAGATCAGACGTTGTATCAAATCCATCCTATAGAGAA 474
                       ************************** *********************************

consensus_13674#0      TAGGTTGTGTAGCTATTGATTGAATGTTATTACTCATAGCCATTTCGCAGTTATGTAATT 1195
consensus_13674#1      TAGGTTGTGTAGCTATTGTTTGAATGTTATTACTCATAGCCATTTCGCAGTTATGTAATT 534
                       ****************** *****************************************

consensus_13674#0      ATTTTTAGATAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCA 1255
consensus_13674#1      ATTTTTAGATAACTGAGATTCTTGAGGTGGCTAGCATTACAATATTGTTGATGAACTCCA 594
                       ************************************************************

consensus_13674#0      TCAATTTTTCATGTCTGTGTTTGTCCTGACTGATGATGCATTGACTCGCTGAAAAAAAAA 1315
consensus_13674#1      TCAATTTTTCAAAAAAAAA-------AAAAAAAAAAAAAACTGCCATGCCGT-------- 639
                       ***********                 *   *  *   * ** *  ** *         

consensus_13674#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1356
consensus_13674#1      -----------------------------------------
                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)