cluster # 13681

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Oryza sativa
cluster # 13681 cluster # 13681 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13681#0 length = 1800 sequences # 8
consensus_13681#1 length = 1445 sequences # 2

consensus_13681#2 length = 784 sequences # 2
consensus_13681#3 length = 567 sequences # 1

consensusID : consensus_13681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1800
fasta sequence

                              [CGATCAGATCAGATCAGCAGATCACCAAGTCTCCTTCACACTCCCACTCCAGCGGCAGCTGAGCAGAGAGCTCCACCGCCGCCGGCCACCATGAGTTCTCACCACCGCTACGCCCACCTCCTCGACGACCCCTTCTTCCCCTTCCCACCGCCGTCCTCCTCCTCCTGCCCCTTCCTCTCCCCACCCGCCGCTTCCTCCACCTGCCCATTCTTCGCCCTCGACTCCCCCTTCGCTGCTGACCCTTTCCATCTCCACCCCTTCCTCCCCACGCCGCCCACTAGCTCCCTCCTCGACCCCTTCCTCCTCCACACCCTCACCGACCGCGTCTCCCAACTCGAGCTCGCCCTCGCCGCCCGCGCCCCACACCCCAGGCCCACCAGCAGGAAGTGCACCTATGTCACCGAGTCCACCGGCCGCAAGGTCAAGTGGACCACCGAGGACAAGCCTCGCGCCGGCGAGAGGGTGCTCAAGTGGGAGGCTGAGCTCGACTCCCCCTACGACGATGGATTCGACCGCAAGTGGAAGTGGGAGGCCAAGGCCAAGACCGCCTCCGCTGCTGCCACCAAGCTCAAGTGGGCCACCCACCTCAAGGGCAAGGGTTGCCTCGAGCCATGGTCACACTCCTACACCTGGGAGGAGGACTTCTCTGCCACCGACGACGACGACGACGAGGAGATCGAGGACCAACTCCATCACAAGGCCCTGCAGGATCACAGCAAGCTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTGGTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAGGAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAGGCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGC-TTCGCTGCCTGCG-TGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCACATGACCATGAAGAGCGCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCTCACTGTAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACCCGCAGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATG-GCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGTTGCTCTTGTTAGGATCTCTGTCGGCTGTTAAACTGCCAAGATGCCCTAGTTCCATTTAAGCTGAGCACTGCCGCACTGGATGTGTGTGCGCCTGTGCGTGCCTATGGGCTATGGTGTCGTTGTGGCCTTCATCGGGCCTGCTTAGTTAATTAATTGCTTCCCTGATTCTCCAGTCAACTGAATAAATCA]

[+] EMBL AK103829             [CGATCAGATCAGATCAGCAGATCACCAAGTCTCCTTCACACTCCCACTCCAGCGGCAGCTGAGCAGAGAGCTCCACCGCCGCCGGCCACCATGAGTTCTCACCACCGCTACGCCCACCTCCTCGACGACCCCTTCTTCCCCTTCCCACCGCCGTCCTCCTCCTCCTGCCCCTTCCTCTCCCCACCCGCCGCTTCCTCCACCTGCCCATTCTTCGCCCTCGACTCCCCCTTCGCTGCTGACCCTTTCCATCTCCACCCCTTCCTCCCCACGCCGCCCACTAGCTCCCTCCTCGACCCCTTCCTCCTCCACACCCTCACCGACCGCGTCTCCCAACTCGAGCTCGCCCTCGCCGCCCGCGCCCCACACCCCAGGCCCACCAGCAGGAAGTGCACCTATGTCACCGAGTCCACCGGCCGCAAGGTCAAGTGGACCACCGAGGACAAGCCTCGCGCCGGCGAGAGGGTGCTCAAGTGGGAGGCTGAGCTCGACTCCCCCTACGACGATGGATTCGACCGCAAGTGGAAGTGGGAGGCCAAGGCCAAGACCGCCTCCGCTGCTGCCACCAAGCTCAAGTGGGCCACCCACCTCAAGGGCAAGGGTTGCCTCGAGCCATGGTCACACTCCTACACCTGGGAGGAGGACTTCTCTGCCACCGACGACGACGACGACGAGGAGATCGAGGACCAACTCCATCACAAGGCCCTGCAGGATCACAGCAAGCTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTGGTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAGGAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAGGCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGC TTCGCTGCCTGCG TGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCGCATGACCATGAAGAGCGCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCTCACTGTAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACCCGCAGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATG GCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGTTGCTCTTGTTAGGATCTCTGTCGGCTGTTAAACTGCCAAGATGCCCTAGTTCCATTTAAGCTGAGCACTGCCGCACTGGATGTGTGTGCGCCTGTGCGTGCCTATGGGCTATGGTGTCGTTGTGGCCTTCATCGGGCCTGCTTAGTTAATTAATTGCTTCCCTGATTCTCCAGTCAACTGAATAAATCA]
[+] EMBL AU173524             [                         CAAGTCTCCTTCACACTCCCACTCCAGCGGCAGCTGAGCAGAGAGCTCCACCGCCGCCGGCCACCATGAGTTCTCACCACCGCTACGCCCACCTCCTCGACGACCCCTTCTTCCCCTTCCCACCGCCGTCCTCCTCCTCCTGCCCCTTCCTCTCCCCACCCGCCGCTTCCTCCACCTGCCCATTCTTCGCCCTCGACTCCCCCTTCGCTGCTGACCCTTTCCATCTCCACCCCTTCCTCCCCACGCCGCCCACTAGCTCCCTCCTCGACCCCTTCCTCCTCCACACCCTCACCGACCGCGTCTCCCAACTCGAGCTCGCCCTCGCCGCCCGCGCCCCACACCCCAGGCCCACCAGCAGGAAGTGCACCTATGTCACCGAGTCCACCGGCCGCAAGGTCAAGTGGACCACCGAGGACAAGCCTCGCGCCGGCGAGAGGGTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSS3562A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGATCACAGCAAGCTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTGGTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAGGAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAGGCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGCTTTCGCTGCCTGCGTTGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSS3973A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGATCACAGCAAGCTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTGGTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAGGAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAGGCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGC TTCGCTGCCTGCN TGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCACATGACCATGAAGAGCGNCAAAGGTTCACTGAGAAAATCATCGTGCTGCTG TCACTGTAGATGCGCTTTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSS2540A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGATCACAGCAAGCTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTGGTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAGGAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAGGCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGC TTCGCTGCCTGCG TGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCACATGACCATGAAGAGCGCCAAAGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF322903             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAGGCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGC TTCGCTGCCTGCG TGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCACATGACCATGAAGAGCGCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCTCACTGTAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACCCGCAGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGNGCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCA                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA998982             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGC TTCGCTGCCTGCG TGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCACATGACCATGAAGAGCGCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCTCACTGTAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA999753             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGC TTCGCTGCCTGCG TGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCACATGACCATGAAGAGCGCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCTCACTGTAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_13681#0
CGATCAGATCAGATCAGCAGATCACCAAGTCTCCTTCACACTCCCACTCCAGCGGCAGCT
GAGCAGAGAGCTCCACCGCCGCCGGCCACCATGAGTTCTCACCACCGCTACGCCCACCTC
CTCGACGACCCCTTCTTCCCCTTCCCACCGCCGTCCTCCTCCTCCTGCCCCTTCCTCTCC
CCACCCGCCGCTTCCTCCACCTGCCCATTCTTCGCCCTCGACTCCCCCTTCGCTGCTGAC
CCTTTCCATCTCCACCCCTTCCTCCCCACGCCGCCCACTAGCTCCCTCCTCGACCCCTTC
CTCCTCCACACCCTCACCGACCGCGTCTCCCAACTCGAGCTCGCCCTCGCCGCCCGCGCC
CCACACCCCAGGCCCACCAGCAGGAAGTGCACCTATGTCACCGAGTCCACCGGCCGCAAG
GTCAAGTGGACCACCGAGGACAAGCCTCGCGCCGGCGAGAGGGTGCTCAAGTGGGAGGCT
GAGCTCGACTCCCCCTACGACGATGGATTCGACCGCAAGTGGAAGTGGGAGGCCAAGGCC
AAGACCGCCTCCGCTGCTGCCACCAAGCTCAAGTGGGCCACCCACCTCAAGGGCAAGGGT
TGCCTCGAGCCATGGTCACACTCCTACACCTGGGAGGAGGACTTCTCTGCCACCGACGAC
GACGACGACGAGGAGATCGAGGACCAACTCCATCACAAGGCCCTGCAGGATCACAGCAAG
CTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTG
GTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAG
GAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAG
GCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGG
GCTCACCTGGCACACCGTTCACAGGTGCTTCGCTGCCTGCGTGATCTGGCTGTGGCTAAG
GCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCA
CATGACCATGAAGAGCGCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCTCACTGTA
GATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAA
CTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACC
CGCAGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGGCCGGTGTG
AACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTC
TAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTA
GCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATGC
ATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAG
CCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGTTGCTCTTGT
TAGGATCTCTGTCGGCTGTTAAACTGCCAAGATGCCCTAGTTCCATTTAAGCTGAGCACT
GCCGCACTGGATGTGTGTGCGCCTGTGCGTGCCTATGGGCTATGGTGTCGTTGTGGCCTT
CATCGGGCCTGCTTAGTTAATTAATTGCTTCCCTGATTCTCCAGTCAACTGAATAAATCA

consensusID : consensus_13681#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1445
fasta sequence

                              [GAGAGCTCCACCGCCGCCGGCCACCATGAGTTCTCACCACCGCTACGCCCACCTCCTCGACGACCCCTTCTTCCCCTTCCCACCGCCGTCCTCCTCCTCCTGCCCCTTCCTCTCCCCACCCGCCGCTTCCTCCACCTGCCCATTCTTCGCCCTCGACTCCCCCTTCGCTGCTGACCCTTTCCATCTCCACCCCTTCCTCCCCACGCCGCCCACTAGCTCCCTCCTCGACCCCTTCCTCCTCCACACCCTCACCGACCGCGTCTCCCAACTCGAGCTCGCCCTCGCCGCCCGCGCCCCACACCCCAGGCCCACCAGCAGGAAGTGCACCTATGTCACCGAGTCCACCGGCCGCAAGGTCAAGTGGACCACCGAGGACAAGCCTCGCGCCGGCGAGAGGGTGCTCAAGTGGGAGGCTGAGCTCGACTCCCCCTACGACGATGGATTCGACCGCAAGTGGAAGTGGGAGGCCAAGGCCAAGACCGCCTCCGCTGCTGCCACCAAGCTCAAGTGGGCCACCCACCTCAAGGGCAAGGGTTGCCTCGAGCCATGGTCACACTCCTACACCTGGGAGGAGGACTTCTCTGCCACCGACGACGACGACGACGAGGAGATCGAGGACCAACTCCATCACAAGGCCCTGCAGGATCACAGCAAGCTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTGGTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAGGAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAGGCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGCTTCGCTGCCTGCGTGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACCCGCAGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGGCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGT]

[+] EMBL AK060638             [GAGAGCTCCACCGCCGCCGGCCACCATGAGTTCTCACCACCGCTACGCCCACCTCCTCGACGACCCCTTCTTCCCCTTCCCACCGCCGTCCTCCTCCTCCTGCCCCTTCCTCTCCCCACCCGCCGCTTCCTCCACCTGCCCATTCTTCGCCCTCGACTCCCCCTTCGCTGCTGACCCTTTCCATCTCCACCCCTTCCTCCCCACGCCGCCCACTAGCTCCCTCCTCGACCCCTTCCTCCTCCACACCCTCACCGACCGCGTCTCCCAACTCGAGCTCGCCCTCGCCGCCCGCGCCCCACACCCCAGGCCCACCAGCAGGAAGTGCACCTATGTCACCGAGTCCACCGGCCGCAAGGTCAAGTGGACCACCGAGGACAAGCCTCGCGCCGGCGAGAGGGTGCTCAAGTGGGAGGCTGAGCTCGACTCCCCCTACGACGATGGATTCGACCGCAAGTGGAAGTGGGAGGCCAAGGCCAAGACCGCCTCCGCTGCTGCCACCAAGCTCAAGTGGGCCACCCACCTCAAGGGCAAGGGTTGCCTCGAGCCATGGTCACACTCCTACACCTGGGAGGAGGACTTCTCTGCCACCGACGACGACGACGACGAGGAGATCGAGGACCAACTCCATCACAAGGCCCTGCAGGATCACAGCAAGCTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTGGTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAGGAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAGGCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCACCTGGCACACCGTTCACAGGTGCTTCGCTGCCTGCGTGATCTGGCTGTGGCTAAGGCCAAGCTCAAGGAGATCAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACCCGCAGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGGCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGT]
[+] EMBL AU173525             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACCCGCAGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGGCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCACTGTGATAACCNCCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCATTTTAaaaaa                                      ]




>consensus_13681#1
GAGAGCTCCACCGCCGCCGGCCACCATGAGTTCTCACCACCGCTACGCCCACCTCCTCGA
CGACCCCTTCTTCCCCTTCCCACCGCCGTCCTCCTCCTCCTGCCCCTTCCTCTCCCCACC
CGCCGCTTCCTCCACCTGCCCATTCTTCGCCCTCGACTCCCCCTTCGCTGCTGACCCTTT
CCATCTCCACCCCTTCCTCCCCACGCCGCCCACTAGCTCCCTCCTCGACCCCTTCCTCCT
CCACACCCTCACCGACCGCGTCTCCCAACTCGAGCTCGCCCTCGCCGCCCGCGCCCCACA
CCCCAGGCCCACCAGCAGGAAGTGCACCTATGTCACCGAGTCCACCGGCCGCAAGGTCAA
GTGGACCACCGAGGACAAGCCTCGCGCCGGCGAGAGGGTGCTCAAGTGGGAGGCTGAGCT
CGACTCCCCCTACGACGATGGATTCGACCGCAAGTGGAAGTGGGAGGCCAAGGCCAAGAC
CGCCTCCGCTGCTGCCACCAAGCTCAAGTGGGCCACCCACCTCAAGGGCAAGGGTTGCCT
CGAGCCATGGTCACACTCCTACACCTGGGAGGAGGACTTCTCTGCCACCGACGACGACGA
CGACGAGGAGATCGAGGACCAACTCCATCACAAGGCCCTGCAGGATCACAGCAAGCTCAA
AACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTGGTCAA
CAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAGGAGGA
CAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAGGCAAA
GAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGGGCTCA
CCTGGCACACCGTTCACAGGTGCTTCGCTGCCTGCGTGATCTGGCTGTGGCTAAGGCCAA
GCTCAAGGAGATCAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGT
CTATGCTTGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGC
AGAGGTCGTTGACCCGCAGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGA
AGATGGCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCA
TATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCA
TCATCATCATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACAC
ATTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTG
GTCCGGACGTCCAGCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTT
GTTGT

consensusID : consensus_13681#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 784
fasta sequence

                              [AAGGGTNCGGAACTTNAGGGTGNCGGGAANGGNGGTAGCAGTCAGGAATCGTCCTTTTAAAATTTTAACGGNTGCGGAAAAGGCCNGGAGGGCCAAGTTCANGGGGGAATNTTGNGTGNGGTCACGGANAGGGTGGGGGTCCGGAAAANTGGGGGGGACGCCAAGGANTTATGTTGGAGGAAATTGAAGTATGTGGGGGATGTGGACCCTCACCACCAGGGAAGCAGAGTTGTGACCCGCAGGAAGTTCGATCTTCCAGAAGGAGGCCGATCACAGATGAGAAGATGGCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGTTGCTCTTGTTAGGATCTCTGTCGGCTGTTAAACTGCCAAGATGCCCTAGTTCCATTTAAGCTGAGCACTGCCGCACTGGATGTGTGTGCGCCTGTGCGTGCCTATGGGCTATGGTGTCGTTGTGGCCTTCATCGGGCCTGCTTAGTTAATTAATTGCTTCCCTGATTCTCCAAAAAAAAAAAAAANNAAAAAAAAAA]

[-] EMBL BE229187             [AAGGGTNCGGAACTTNAGGGTGNCGGGAANGGNGGTAGCAGTCAGGAATCGTCCTTTTAAAATTTTAACGGNTGCGGAAAAGGCCNGGAGGGCCAAGTTCANGGGGGAATNTTGNGTGNGGTCACGGANAGGGTGGGGGTCCGGAAAANTGGGGGGGACGCCAAGGANTTATGTTGGAGGAAATTGAAGTATGTGGGGGATGTGGACCCTCACCACCAGGGAAGCAGAGTTGTGACCCGCAGGAAGTTCGATCTTCCAGAAGGAGGCCGATCACAGATGAGAAGATGGCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGTTGCT                                                                                                                                                                                                 ]
[+] EMBL AU082316             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCATGGTAGTCTGATTGTNCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCATTTNATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGTTGCTCTTGTTAGGATCTCTGTCGGCTGTTAAACTGCCAAGATGCCCTAGTTCCATTTAAGCTGAGCACTGCCGCACTGGATGTGTGTGCGCCTGTGCGTGCCTATGGGCTATGGTGTCGTTGTGGCCTTCATCGGGCCTGCTTAGTTAATTAATTGCTTCCCTGATTCTCCAAAAAAAAAAAAAANNAAAAAAAAAA]




>consensus_13681#2
AAGGGTNCGGAACTTNAGGGTGNCGGGAANGGNGGTAGCAGTCAGGAATCGTCCTTTTAA
AATTTTAACGGNTGCGGAAAAGGCCNGGAGGGCCAAGTTCANGGGGGAATNTTGNGTGNG
GTCACGGANAGGGTGGGGGTCCGGAAAANTGGGGGGGACGCCAAGGANTTATGTTGGAGG
AAATTGAAGTATGTGGGGGATGTGGACCCTCACCACCAGGGAAGCAGAGTTGTGACCCGC
AGGAAGTTCGATCTTCCAGAAGGAGGCCGATCACAGATGAGAAGATGGCCGGTGTGAACA
ATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGT
GGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCAC
TGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATGCATGG
TAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCAT
TTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGTTGCTCTTGTTAGG
ATCTCTGTCGGCTGTTAAACTGCCAAGATGCCCTAGTTCCATTTAAGCTGAGCACTGCCG
CACTGGATGTGTGTGCGCCTGTGCGTGCCTATGGGCTATGGTGTCGTTGTGGCCTTCATC
GGGCCTGCTTAGTTAATTAATTGCTTCCCTGATTCTCCAAAAAAAAAAAAAANNAAAAAA
AAAA

consensusID : consensus_13681#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 567
fasta sequence

                              [TGTGCTAAGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCACATGACCATGAAGAGCCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCTCACTGTAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACCCGCACGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGGCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACCTTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCCTTTTATTAAAAAAAAAA]

[+] EMBL BI808681             [TGTGCTAAGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCACATGACCATGAAGAGCCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCTCACTGTAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACCCGCACGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGGCCGGTGTGAACAATGCAGTCAAAGTCATCCAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACCTTGTGCACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCAGCCCTTTTATTAAAAAAAAAA]




>consensus_13681#3
TGTGCTAAGCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATC
GCATGGCACATGACCATGAAGAGCCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCT
CACTGTAGATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCT
TGATGAACTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTC
GTTGACCCGCACGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGG
CCGGTGTGAACAATGCAGTCAAAGTCATCCAAAGGGAAAGAAGTAAGAGGCCATATCTCA
TCTCGTCTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCAT
CATTGTAGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACCTTGTGC
ACTATGCATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGA
CGTCCAGCCCTTTTATTAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13681#0      CGATCAGATCAGATCAGCAGATCACCAAGTCTCCTTCACACTCCCACTCCAGCGGCAGCT 60
consensus_13681#1      ------------------------------------------------------------
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      GAGCAGAGAGCTCCACCGCCGCCGGCCACCATGAGTTCTCACCACCGCTACGCCCACCTC 120
consensus_13681#1      -----GAGAGCTCCACCGCCGCCGGCCACCATGAGTTCTCACCACCGCTACGCCCACCTC 55
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      CTCGACGACCCCTTCTTCCCCTTCCCACCGCCGTCCTCCTCCTCCTGCCCCTTCCTCTCC 180
consensus_13681#1      CTCGACGACCCCTTCTTCCCCTTCCCACCGCCGTCCTCCTCCTCCTGCCCCTTCCTCTCC 115
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      CCACCCGCCGCTTCCTCCACCTGCCCATTCTTCGCCCTCGACTCCCCCTTCGCTGCTGAC 240
consensus_13681#1      CCACCCGCCGCTTCCTCCACCTGCCCATTCTTCGCCCTCGACTCCCCCTTCGCTGCTGAC 175
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      CCTTTCCATCTCCACCCCTTCCTCCCCACGCCGCCCACTAGCTCCCTCCTCGACCCCTTC 300
consensus_13681#1      CCTTTCCATCTCCACCCCTTCCTCCCCACGCCGCCCACTAGCTCCCTCCTCGACCCCTTC 235
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      CTCCTCCACACCCTCACCGACCGCGTCTCCCAACTCGAGCTCGCCCTCGCCGCCCGCGCC 360
consensus_13681#1      CTCCTCCACACCCTCACCGACCGCGTCTCCCAACTCGAGCTCGCCCTCGCCGCCCGCGCC 295
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      CCACACCCCAGGCCCACCAGCAGGAAGTGCACCTATGTCACCGAGTCCACCGGCCGCAAG 420
consensus_13681#1      CCACACCCCAGGCCCACCAGCAGGAAGTGCACCTATGTCACCGAGTCCACCGGCCGCAAG 355
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      GTCAAGTGGACCACCGAGGACAAGCCTCGCGCCGGCGAGAGGGTGCTCAAGTGGGAGGCT 480
consensus_13681#1      GTCAAGTGGACCACCGAGGACAAGCCTCGCGCCGGCGAGAGGGTGCTCAAGTGGGAGGCT 415
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      GAGCTCGACTCCCCCTACGACGATGGATTCGACCGCAAGTGGAAGTGGGAGGCCAAGGCC 540
consensus_13681#1      GAGCTCGACTCCCCCTACGACGATGGATTCGACCGCAAGTGGAAGTGGGAGGCCAAGGCC 475
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      AAGACCGCCTCCGCTGCTGCCACCAAGCTCAAGTGGGCCACCCACCTCAAGGGCAAGGGT 600
consensus_13681#1      AAGACCGCCTCCGCTGCTGCCACCAAGCTCAAGTGGGCCACCCACCTCAAGGGCAAGGGT 535
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      TGCCTCGAGCCATGGTCACACTCCTACACCTGGGAGGAGGACTTCTCTGCCACCGACGAC 660
consensus_13681#1      TGCCTCGAGCCATGGTCACACTCCTACACCTGGGAGGAGGACTTCTCTGCCACCGACGAC 595
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      GACGACGACGAGGAGATCGAGGACCAACTCCATCACAAGGCCCTGCAGGATCACAGCAAG 720
consensus_13681#1      GACGACGACGAGGAGATCGAGGACCAACTCCATCACAAGGCCCTGCAGGATCACAGCAAG 655
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      CTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTG 780
consensus_13681#1      CTCAAAACCAAGGCCAAGGACGACAAGAAGAAAAAGAAGAAGGACAACAACACCGTGGTG 715
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      GTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAG 840
consensus_13681#1      GTCAACAAGGAGCAGAAGAAATGCCCCTTCTCCGTCAAGATCGAGGAGATCCCACCTGAG 775
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      GAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAG 900
consensus_13681#1      GAGGACAACACCGCTGGATGCGTCGCCATTAGAAAGGCTTTTGCATTGGGCAATGGCAAG 835
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      ------------------------------------------------------------
                                                                                   

consensus_13681#0      GCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGG 960
consensus_13681#1      GCAAAGAAGAAGGAACTGTCCCCACAGGATGCGGCATTGCTGATCCAGTTGAACTACAGG 895
consensus_13681#3      -----------------------------TGTGCTAAGCCAAGCTCAAGGAGATCAGGTC 31
consensus_13681#2      ------------------------AAGGGTNCGGAACTTNAGGGTGNCGGGAANGGNGGT 36
                                                    *  *  *                *       

consensus_13681#0      GCTCACCTGGCACACCGTTCACAGGTGCTTCGCTGCCTGCGTGATCTGGCTGTGGCTAAG 1020
consensus_13681#1      GCTCACCTGGCACACCGTTCACAGGTGCTTCGCTGCCTGCGTGATCTGGCTGTGGCTAAG 955
consensus_13681#3      CCTCTTCTATAACATCTCTTACAGGCATCGCATGGC--ACATGACCATGAAGAGCCCAAA 89
consensus_13681#2      AGCAGTCAGGAATCGTCCTTTTAAAATTTTAACGGN-TGCG-GAAAAGGCCNGG---AGG 91
                             *    *      *   *           *    *  **    *    *   *  

consensus_13681#0      GCCAAGCTCAAGGAGATCAGGTCCCTCTTCTATAACATCTCTTACAGGCATCGCATGGCA 1080
consensus_13681#1      GCCAAGCTCAAGGAGATCAG---------------------------------------- 975
consensus_13681#3      GGTTCACT-GAGAAAATCAT---------------------------------------- 108
consensus_13681#2      GCCAAGTTCANGGGGGAATN---------------------------------------- 111
                       *      *   *                                                

consensus_13681#0      CATGACCATGAAGAGCGCCAAAGGTTCACTGAGAAAATCATCGTGCTGCTGCTCACTGTA 1140
consensus_13681#1      ------------------------------------------------------------
consensus_13681#3      -----------------------------------------CGTGCTGCTGCTCACTGTA 127
consensus_13681#2      ----------------------------------------------TTGNGTGNGGTCAC 125
                                                                                   

consensus_13681#0      GATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAA 1200
consensus_13681#1      -ATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAA 1034
consensus_13681#3      GATGCGCTTGAGGGTCCTGACTACATGGTGAGGACAGCAAAGAAGTCTATGCTTGATGAA 187
consensus_13681#2      GGANAGGGTGGGGGTCCGGAAAAN-TGGGGGGGACGCCAAGGA--NTTATGTTGGAGGAA 182
                            *  ** ****** **  *  *** * ****  *** **    **** * ** ***

consensus_13681#0      CTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACC 1260
consensus_13681#1      CTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACC 1094
consensus_13681#3      CTTGAAGGTATGCTGGAGATTGTGGACCCTCAGCCACCAGGGAAGCAGAGGTCGTTGACC 247
consensus_13681#2      ATTGAAG-TATG-TGGGGGATGTGGACCCTCA-CCACCAGGGAAGCAGAGTTG--TGACC 237
                        ****** **** *** *  ************ ***************** *   *****

consensus_13681#0      CGCA-GGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGGCCGGTGT 1319
consensus_13681#1      CGCA-GGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGGCCGGTGT 1153
consensus_13681#3      CGCACGGAAGTTCGATCTTCCAGAAGGAGGGCCGATCACAGATGAGAAGATGGCCGGTGT 307
consensus_13681#2      CGCA-GGAAGTTCGATCTTCCAGAAGGAGG-CCGATCACAGATGAGAAGATGGCCGGTGT 295
                       **** ************************* *****************************

consensus_13681#0      GAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGT 1379
consensus_13681#1      GAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGT 1213
consensus_13681#3      GAACAATGCAGTCAAAGTCATCCAAA-GGGAAAGAAGTAAGAGGCCATATCTCATCTCGT 366
consensus_13681#2      GAACAATGCAGTCAAAGTCATCCAAAAGGGAAAGAAGTAAGAGGCCATATCTCATCTCGT 355
                       ************************** *********************************

consensus_13681#0      CTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGT 1439
consensus_13681#1      CTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGT 1273
consensus_13681#3      CTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGT 426
consensus_13681#2      CTAGTGGTTATCACGCATATGATGGAGCTTGTAGCACTGTATCATCATCATCATCATTGT 415
                       ************************************************************

consensus_13681#0      AGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATG 1499
consensus_13681#1      AGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATG 1333
consensus_13681#3      AGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACCTTGTGCACTATG 486
consensus_13681#2      AGCACTGTGATAACCACCGTTGTTGTTTTCAGTTTGTTGAGGAACACATTGTGCACTATG 475
                       *********************************************** ************

consensus_13681#0      CATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCA 1559
consensus_13681#1      CATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCA 1393
consensus_13681#3      CATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCA 546
consensus_13681#2      CATGGTAGTCTGATTGTGCTAGCTAGCAAGCACTAAGCAGCTGTTTGGTCCGGACGTCCA 535
                       ************************************************************

consensus_13681#0      GCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGTTGCTCTTG 1619
consensus_13681#1      GCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGT-------- 1445
consensus_13681#3      GCCCTTTTATTAAAAAAAAAA--------------------------------------- 567
consensus_13681#2      GCCATTTTATTTGCTTTGTACTCGTATGCTGTTGTTATCCAGATGTTGTTGTTGCTCTTG 595
                       *** *******        *                                        

consensus_13681#0      TTAGGATCTCTGTCGGCTGTTAAACTGCCAAGATGCCCTAGTTCCATTTAAGCTGAGCAC 1679
consensus_13681#1      ------------------------------------------------------------
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      TTAGGATCTCTGTCGGCTGTTAAACTGCCAAGATGCCCTAGTTCCATTTAAGCTGAGCAC 655
                                                                                   

consensus_13681#0      TGCCGCACTGGATGTGTGTGCGCCTGTGCGTGCCTATGGGCTATGGTGTCGTTGTGGCCT 1739
consensus_13681#1      ------------------------------------------------------------
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      TGCCGCACTGGATGTGTGTGCGCCTGTGCGTGCCTATGGGCTATGGTGTCGTTGTGGCCT 715
                                                                                   

consensus_13681#0      TCATCGGGCCTGCTTAGTTAATTAATTGCTTCCCTGATTCTCCAGTCAACTGAATAAATC 1799
consensus_13681#1      ------------------------------------------------------------
consensus_13681#3      ------------------------------------------------------------
consensus_13681#2      TCATCGGGCCTGCTTAGTTAATTAATTGCTTCCCTGATTCTCCAAAAAAAAAAAAAANNA 775
                                                                                   

consensus_13681#0      A-------- 1800
consensus_13681#1      ---------
consensus_13681#3      ---------
consensus_13681#2      AAAAAAAAA 784