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Oryza sativa
cluster # 13711 cluster # 13711       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13711#0 length = 1482 sequences # 12  
consensus_13711#1 length = 797 sequences # 1  

consensusID : consensus_13711#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1482
fasta sequence
                              [CGACCCCGTCGCGTTCCGACCCGACCAGAGCACCCGACCCCACCCAGAAGAAGGAAAAAAAAAATCCGATCGGGCCTCGCCGCGCGCGCCGGCCACCGCCACCGCCACCGCTACCACGAGCGCCATACTCCCCTCCCTCCTCGCCACCGTCGGCTCCCTCGCCACAGGCGCCGTCGCGGCGCTCGCGGCGGCGGGGGCGCACGCGGGGTCCCTCCCCCGCGCCCGCTCGGTGGCGTCGGTAGCGGCGGCGGCGGCCATGTCGACGGCCCGCGTCTACGCCGACGTGAACGTGCACCGCCCCAGGGAGTAC-TGGGACTACGAGGCCCTCGCCGTCGAA-TGGGGTGAGCAGGATGATTACGAGG-TTGTGCGAAAGGTAGGC-AGAGGGAAATAC-AGTGAAGT-CTTCGAAGGAATTAATGTGAC-AAATGATGAGCGCTGCATNATTAAAATTCTCAAGCCTGTTAAGAAAAAGAAGATAAAGAGGGAAATAAAAATTCTTCAGAACCTCTGTGGTGGTCCAAATATTGTCAAACTTCACAATATTGTCAGAGATCAACAATCAAAAACTCCAAGTTTGATATTTGAATATGTAAACAGCACAGATTTCAAAGTTCTGTATCCAACATTGACAGACTATGATATTCGATTCTACATTTATGAACTTCTTAAGGCATTGGATTACTGTCATTCTCAAGGAATTATGCACCGCGATGTCAAGCCTCACAATGTTATGATTGACCATGAACTCCGCAAGCTTCGCTTAATTGATTGGGGACTTGCTGAGTTTTATTTTCCAGAGAAAGAGTACAATGTTCGGGTTGCCTCAAGATACTTCAAAGGGCCTGAATTGCTGGTTGACTTCCAAAGTTATGACTACTCTTTAGACATGTGGAGCCTTGGCTGTATGTTTGCTGGAATGATATTTCGCAAGGAACCATTCTTCTATGGCCACGATAACCATGACCAGCTTGTC-AAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAGGCATACCAGGAAACCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGACCACCATGACAGGCTGACCGCTCGTGAAGCTATGGCGCATCCCTACTTTGAACAAGTGAGGGCAGCAGAAGACTGCAGAATGAGAACGTAACATGAACGGAACGCCATCTGC-TGCTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCCTTTGTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTCTATAAATCAGATTATCAGAGATAATCTCTTTTCAAAAAAAAA]

[+] EMBL AU173433             [CGACCCCGTCGCGTTCCGACCCGACCAGAGCACCCGACCCCACCCAGAAGAAGGAAAAAAAAAATCCGATCGGGCCTCGCCGCGCGCGCCGGCCACCGCCACCGCCACCGCTACCACGAGCGCCATACTCCCCTCCCTCCTCGCCACCGTCGGCTCCCTCGCCACAGGCGCCGTCGCGGCGCTCGCGGCGGCGGGGGCGCACGCGGGGTCCCTCCCCCGCGCCCGCTCGGTGGCGTCGGTAGCGGCGGCGGCGGCCATGTCGACGGCCCGCGTCTACGCCGACGTGAACGTGCACCGCCCCAGGGAGTAC TGGGACTACGAGGCCCTCGCCGTCGAA TGGGGTGAGCAGGATGATTACGAGG TTGTGCGAAAGGTAGGC AGAGGGAAATAC AGTGAAGT CTTCGAAGGAATTAATGTGAC AAATGATGAGCGCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU163565             [         cgtntggCGACACGACNAGAGCACCCGACNCCACCCAGAAGAAGGAAAAAAAAAATCCGATCGGGCNTCGCCGCGCGCGCCGGCNACCGCCACCGCCACCGCTACCACGAGCGCCATACTCCCCTCCCTCCTCGCCACCGTCGGCTCCCTCGCCACAGG GCCGTCGCGGCGTTCGCGGCGGCGGGGGCGCACGCGGGGTCCCTCCCCCGCGCCCGCTCGGTGGCGTCGGTAGCGGCGGCGGCGGCCATGTCGACGGCCCGCGTCTACGCCGACGTGAACGTGCACCGCCCCAGGGAGTACTTGGGACTACGAGGCCCTCGCCGTCGAATTGGGGTGAGCAGGATGATTACGAGGTTTGTGCGAAAGGTAGGCAAGAGGGAAATACAAGTGAAGTNTTTCGAAGGATTTAATGTGACAAAATTATNAGCG TTCATNATTAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK120259             [                                 CCGACCCCACCCAGAAGAAGGAAAAAAAAAATCCGATCGGGCCTCGCCGCGCGCGCCGGCCACCGCCACCGCCACCGCTACCACGAGCGCCATACTCCCCTCCCTCCTCGCCACCGTCGGCTCCCTCGCCACAGGCGCCGTCGCGGCGCTCGCGGCGGCGGGGGCGCACGCGGGGTCCCTCCCCCGCGCCCGCTCGGTGGCGTCGGTAGCGGCGGCGGCGGCCATGTCGACGGCCCGCGTCTACGCCGACGTGAACGTGCACCGCCCCAGGGAGTAC TGGGACTACGAGGCCCTCGCCGTCGAA TGGGGTGAGCAGGATGATTACGAGG TTGTGCGAAAGGTAGGC AGAGGGAAATAC AGTGAAGT CTTCGAAGGAATTAATGTGAC AAATGATGAGCGCTGCATCATTAAAATTCTCAAGCCTGTTAAGAAAAAGAAGATAAAGAGGGAAATAAAAATTCTTCAGAACCTCTGTGGTGGTCCAAATATTGTCAAACTTCACAATATTGTCAGAGATCAACAATCAAAAACTCCAAGTTTGATATTTGAATATGTAAACAGCACAGATTTCAAAGTTCTGTATCCAACATTGACAGACTATGATATTCGATTCTACATTTATGAACTTCTTAAGGCATTGGATTACTGTCATTCTCAAGGAATTATGCACCGCGATGTCAAGCCTCACAATGTTATGATTGACCATGAACTCCGCAAGCTTCGCTTAATTGATTGGGGACTTGCTGAGTTTTATTTTCCAGAGAAAGAGTACAATGTTCGGGTTGCCTCAAGATACTTCAAAGGGCCTGAATTGCTGGTTGACTTCCAAAGTTATGACTACTCTTTAGACATGTGGAGCCTTGGCTGTATGTTTGCTGGAATAATATTTCGCAAGGAACCATTCTTCTATGGCCACGATAACCATGACCAGCTTGTC AAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAGGCATACCAGGAAACCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGACCACCATGACAGGCTGACCGCTCGTGAAGCTATGGCGCATCCCTACTTTGAACAAGTGAGGGCAGCAGAAGACTGCAGAATGAGAACGTAACATGAACGGAACGCCATCTGC TGCTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCCTTTGTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTCTATAAATCAGATTATCAGAGATA                   ]
[+] EMBL AK058359             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCCAAGTTTGATATTTGAATATGTAAACAGCACAGATTTCAAAGTTCTGTATCCAACATTGACAGACTATGATATTCGATTCTACATTTATGAACTTCTTAAGGCATTGGATTACTGTCATTCTCAAGGAATTATGCACCGCGATGTCAAGCCTCACAATGTTATGATTGACCATGAACTCCGCAAGCTTCGCTTAATTGATTGGGGACTTGCTGAGTTTTATTTTCCAGAGAAAGAGTACAATGTTCGGGTTGCCTCAAGATACTTCAAAGGGCCTGAATTGCTGGTTGACTTCCAAAGTTATGACTACTCTTTAGACATGTGGAGCCTTGGCTGTATGTTTGCTGGAATGATATTTCGCAAGGAACCATTCTTCTATGGCCACGATAACCATGACCAGCTTGTC AAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAGGCATACCAGGAAACCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGACCACCATGACAGGCTGACCGCTCGTGAAGCTATGGCGCATCCCTACTTTGAACAAGTGAGGGCAGCAGAAGACTGCAGAATGAGAACGTAACATGAACGGAACGCCATCTGC TGCTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCCTTTGTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTCTATAAATCAGATTATCAGAGATA                   ]
[-] EMBL CA762873             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GATACTTCAAAGGGCCTGAATTGCTGGTTGACTTCCAAAGTTATGACTACTCTTTAGACATGTGGAGCCTTGGCTGTATGTTTGCTGGAATGATATTTCGCAAGGAACCATTCTTCTATGGCCACGATAACCATGACCAGCTTGTC AAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAGGCATACCAGGAAACCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGACCACCATGACAGGCTGACAGCTCGTGAAGCTATGGCGCACCCCTACTTTGAACAAGTGAGGGCAGCAGAAGACTGCAGAATGAGAACGTAACATGAACGGAACGCCATCTGC TGCTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCCTTTGTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACAGCAT AAGTGCCGAGTCTATAAATCAGATTATCAGAGATAATCTCTTTTCAAAAAA   ]
[+] EMBL BI805580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTGTCAAAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAGGCATA CAGGAAACCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGACCACCATGACAGGCTGACCGCTCGTGAAGCTATGGCGCATCCCTACTTTGAACAAGTGAGGGCAGCAGAAGACTGCAGAATGAGAACGTAACATGAACGGAACGCCATCTGC TGCTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCCTTTGTTTTATTCTATTCTACTGAGGCAACGC AAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTCTATAAATCAGATTATCAGAGATAATCTCTTTTCAA       ]
[+] EMBL AU173434             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAGGCATACCAGGAAACCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGACCACCATGACAGGCTGACCGCTCGTGAAGCTATGGCGCATCCCTACTTTGAACAAGTGAGGGCAGCAGAAGACTGCAGAATGAGAACGTAACATGAACGGAACGCCATCTGC TGCTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCCTTTGTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTCTATAAATCAGATTATCAGAaaaa                   ]
[+] EMBL AA752223             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATAGGCATCTTTTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGACCACCATGACAGGCTGACAGCTCGTGAAGCTATGGCGCATCCCTACTTTGAACAAGTGAGGGCAGCAGAAGACTGCTGAATGAGAACGTAACATGAACGGAA NNCATCTGCTTGCTGTTGGATTGCACTGGA                                                                                                                                                                                          ]
[+] EMBL CF329539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCCTTTGTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTCTATAAATCAGATTATCAGAGATAATCTCTTTTCAAAAA    ]
[-] EMBL CF329538             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCCTTTGTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTCTATAAATCAGATTATCAGAGATAATCTCTTTTCAAAAAA   ]
[+] EMBL CF328113             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTCTATAAATCAGATTATCAGAGATAATCTCTTTTCAAAAAAAA ]
[-] EMBL CF328114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTCTATAAATCAGATTATCAGAGATAATCTCTTTTCAAAAAAAAA]


>consensus_13711#0 CGACCCCGTCGCGTTCCGACCCGACCAGAGCACCCGACCCCACCCAGAAGAAGGAAAAAA AAAATCCGATCGGGCCTCGCCGCGCGCGCCGGCCACCGCCACCGCCACCGCTACCACGAG CGCCATACTCCCCTCCCTCCTCGCCACCGTCGGCTCCCTCGCCACAGGCGCCGTCGCGGC GCTCGCGGCGGCGGGGGCGCACGCGGGGTCCCTCCCCCGCGCCCGCTCGGTGGCGTCGGT AGCGGCGGCGGCGGCCATGTCGACGGCCCGCGTCTACGCCGACGTGAACGTGCACCGCCC CAGGGAGTACTGGGACTACGAGGCCCTCGCCGTCGAATGGGGTGAGCAGGATGATTACGA GGTTGTGCGAAAGGTAGGCAGAGGGAAATACAGTGAAGTCTTCGAAGGAATTAATGTGAC AAATGATGAGCGCTGCATNATTAAAATTCTCAAGCCTGTTAAGAAAAAGAAGATAAAGAG GGAAATAAAAATTCTTCAGAACCTCTGTGGTGGTCCAAATATTGTCAAACTTCACAATAT TGTCAGAGATCAACAATCAAAAACTCCAAGTTTGATATTTGAATATGTAAACAGCACAGA TTTCAAAGTTCTGTATCCAACATTGACAGACTATGATATTCGATTCTACATTTATGAACT TCTTAAGGCATTGGATTACTGTCATTCTCAAGGAATTATGCACCGCGATGTCAAGCCTCA CAATGTTATGATTGACCATGAACTCCGCAAGCTTCGCTTAATTGATTGGGGACTTGCTGA GTTTTATTTTCCAGAGAAAGAGTACAATGTTCGGGTTGCCTCAAGATACTTCAAAGGGCC TGAATTGCTGGTTGACTTCCAAAGTTATGACTACTCTTTAGACATGTGGAGCCTTGGCTG TATGTTTGCTGGAATGATATTTCGCAAGGAACCATTCTTCTATGGCCACGATAACCATGA CCAGCTTGTCAAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAA ATACAGGATTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAGGCATACCAGGAAACC TTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGATTT TCTTGATAAACTTATTCGCTTCGACCACCATGACAGGCTGACCGCTCGTGAAGCTATGGC GCATCCCTACTTTGAACAAGTGAGGGCAGCAGAAGACTGCAGAATGAGAACGTAACATGA ACGGAACGCCATCTGCTGCTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCCTTT GTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTCCGC TTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGAGTC TATAAATCAGATTATCAGAGATAATCTCTTTTCAAAAAAAAA



consensusID : consensus_13711#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 797
fasta sequence
                              [GNGGACGAGACANGGNGGNAGGNATGAANGNGACNACGACTGAGCTGCTGNATCATTAAAATTCTAAGCCTGTTAAGAAAAAGANNANANNGAGGGANATACAAATTCTTCANAACCTCTGTGGTGGTCCAAATANTGTCAAACTTCACAANATTGNCAGAGATCAACAGTCAAAAACTCCAAGTTTGATATTTGAATATGTAAACATGCACAGATTTCAAAGTTCTGTATCCAACATTGACAGACTATGATATTCGATTCTACATTTATGAACTTCTTAAGGCATTGGATTACTGNCATTCTCAAGGAATTATGCACCGCGATGTCAAGCCTCACAATGTTATGATNGACCATGAACTCCGCAAGCTTCGCTTAATTGATTGGNGACTTGCTGAGTTTTATTTTCCAGAGAAAGAGTACAATGTTCGGGTTGCCTCAAGATACTTCAAAGGGCCTGAATTGCTGGNTGACTTCCAAAGNTATGACTACTCTTTAGACATGCGGAGCCTTGNCTGTATGNTNGCTGGAATGATATTTNGCANGGAACCATTCTTCTATGGNCACGATAACCATGACCAGCTTGNCAAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAGCTNGAGGCTCTGATTGGGAGGCATACCAGGAAACCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGGACCACCATGACAGNCTGA]

[+] EMBL CA764962             [GNGGACGAGACANGGNGGNAGGNATGAANGNGACNACGACTGAGCTGCTGNATCATTAAAATTCTAAGCCTGTTAAGAAAAAGANNANANNGAGGGANATACAAATTCTTCANAACCTCTGTGGTGGTCCAAATANTGTCAAACTTCACAANATTGNCAGAGATCAACAGTCAAAAACTCCAAGTTTGATATTTGAATATGTAAACATGCACAGATTTCAAAGTTCTGTATCCAACATTGACAGACTATGATATTCGATTCTACATTTATGAACTTCTTAAGGCATTGGATTACTGNCATTCTCAAGGAATTATGCACCGCGATGTCAAGCCTCACAATGTTATGATNGACCATGAACTCCGCAAGCTTCGCTTAATTGATTGGNGACTTGCTGAGTTTTATTTTCCAGAGAAAGAGTACAATGTTCGGGTTGCCTCAAGATACTTCAAAGGGCCTGAATTGCTGGNTGACTTCCAAAGNTATGACTACTCTTTAGACATGCGGAGCCTTGNCTGTATGNTNGCTGGAATGATATTTNGCANGGAACCATTCTTCTATGGNCACGATAACCATGACCAGCTTGNCAAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAGCTNGAGGCTCTGATTGGGAGGCATACCAGGAAACCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGGACCACCATGACAGNCTGA]


>consensus_13711#1 GNGGACGAGACANGGNGGNAGGNATGAANGNGACNACGACTGAGCTGCTGNATCATTAAA ATTCTAAGCCTGTTAAGAAAAAGANNANANNGAGGGANATACAAATTCTTCANAACCTCT GTGGTGGTCCAAATANTGTCAAACTTCACAANATTGNCAGAGATCAACAGTCAAAAACTC CAAGTTTGATATTTGAATATGTAAACATGCACAGATTTCAAAGTTCTGTATCCAACATTG ACAGACTATGATATTCGATTCTACATTTATGAACTTCTTAAGGCATTGGATTACTGNCAT TCTCAAGGAATTATGCACCGCGATGTCAAGCCTCACAATGTTATGATNGACCATGAACTC CGCAAGCTTCGCTTAATTGATTGGNGACTTGCTGAGTTTTATTTTCCAGAGAAAGAGTAC AATGTTCGGGTTGCCTCAAGATACTTCAAAGGGCCTGAATTGCTGGNTGACTTCCAAAGN TATGACTACTCTTTAGACATGCGGAGCCTTGNCTGTATGNTNGCTGGAATGATATTTNGC ANGGAACCATTCTTCTATGGNCACGATAACCATGACCAGCTTGNCAAAATAGCCAAGGTT CTAGGTACAGACCAGCTTAATGCTTACCTGAATAAATACAGGATTGCACTTGATCCCCAG CTNGAGGCTCTGATTGGGAGGCATACCAGGAAACCTTGGTCTAAGTTTATAAATCCAGAA AATAGGCATCTTGTCTCTCCAGAGGCTATTGATTTTCTTGATAAACTTATTCGCTTCGGA CCACCATGACAGNCTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13711#0      CGACCCCGTCGCGTTCCGACCCGACCAGAGCACCCGACCCCACCCAGAAGAAGGAAAAAA 60
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      AAAATCCGATCGGGCCTCGCCGCGCGCGCCGGCCACCGCCACCGCCACCGCTACCACGAG 120
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      CGCCATACTCCCCTCCCTCCTCGCCACCGTCGGCTCCCTCGCCACAGGCGCCGTCGCGGC 180
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      GCTCGCGGCGGCGGGGGCGCACGCGGGGTCCCTCCCCCGCGCCCGCTCGGTGGCGTCGGT 240
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      AGCGGCGGCGGCGGCCATGTCGACGGCCCGCGTCTACGCCGACGTGAACGTGCACCGCCC 300
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      CAGGGAGTACTGGGACTACGAGGCCCTCGCCGTCGAATGGGGTGAGCAGGATGATTACGA 360
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      GGTTGTGCGAAAGGTAGGCAGAGGGAAATACAGTGAAGTCTTCGAAGGAATTAATGTGAC 420
consensus_13711#1      --------------------GNGGACGAGACANGGNGG------NAGGNATGAANGNGAC 34
                                           * **   * ***  *  *       *** ** ** * ***

consensus_13711#0      AAATGATGAGC-GCTGCATNATTAAAATTCTCAAGCCTGTTAAGAAAAAGAAGATAAAGA 479
consensus_13711#1      NACGACTGAGCTGCTGNATCATTAAAATTCT-AAGCCTGTTAAGAAAAAGANNANANNGA 93
                        *    ***** **** ** *********** *******************  * *  **

consensus_13711#0      GGGAAATAAAAATTCTTCAGAACCTCTGTGGTGGTCCAAATATTGTCAAACTTCACAATA 539
consensus_13711#1      GGGANATACAAATTCTTCANAACCTCTGTGGTGGTCCAAATANTGTCAAACTTCACAANA 153
                       **** *** ********** ********************** *************** *

consensus_13711#0      TTGTCAGAGATCAACAATCAAAAACTCCAAGTTTGATATTTGAATATGTAAACA-GCACA 598
consensus_13711#1      TTGNCAGAGATCAACAGTCAAAAACTCCAAGTTTGATATTTGAATATGTAAACATGCACA 213
                       *** ************ ************************************* *****

consensus_13711#0      GATTTCAAAGTTCTGTATCCAACATTGACAGACTATGATATTCGATTCTACATTTATGAA 658
consensus_13711#1      GATTTCAAAGTTCTGTATCCAACATTGACAGACTATGATATTCGATTCTACATTTATGAA 273
                       ************************************************************

consensus_13711#0      CTTCTTAAGGCATTGGATTACTGTCATTCTCAAGGAATTATGCACCGCGATGTCAAGCCT 718
consensus_13711#1      CTTCTTAAGGCATTGGATTACTGNCATTCTCAAGGAATTATGCACCGCGATGTCAAGCCT 333
                       *********************** ************************************

consensus_13711#0      CACAATGTTATGATTGACCATGAACTCCGCAAGCTTCGCTTAATTGATTGGGGACTTGCT 778
consensus_13711#1      CACAATGTTATGATNGACCATGAACTCCGCAAGCTTCGCTTAATTGATTGGNGACTTGCT 393
                       ************** ************************************ ********

consensus_13711#0      GAGTTTTATTTTCCAGAGAAAGAGTACAATGTTCGGGTTGCCTCAAGATACTTCAAAGGG 838
consensus_13711#1      GAGTTTTATTTTCCAGAGAAAGAGTACAATGTTCGGGTTGCCTCAAGATACTTCAAAGGG 453
                       ************************************************************

consensus_13711#0      CCTGAATTGCTGGTTGACTTCCAAAGTTATGACTACTCTTTAGACATGTGGAGCCTTGGC 898
consensus_13711#1      CCTGAATTGCTGGNTGACTTCCAAAGNTATGACTACTCTTTAGACATGCGGAGCCTTGNC 513
                       ************* ************ ********************* ********* *

consensus_13711#0      TGTATGTTTGCTGGAATGATATTTCGCAAGGAACCATTCTTCTATGGCCACGATAACCAT 958
consensus_13711#1      TGTATGNTNGCTGGAATGATATTTNGCANGGAACCATTCTTCTATGGNCACGATAACCAT 573
                       ****** * *************** *** ****************** ************

consensus_13711#0      GACCAGCTTGTCAAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAAT 1018
consensus_13711#1      GACCAGCTTGNCAAAATAGCCAAGGTTCTAGGTACAGACCAGCTTAATGCTTACCTGAAT 633
                       ********** *************************************************

consensus_13711#0      AAATACAGGATTGCACTTGATCCCCAGCTTGAGGCTCTGATTGGGAGGCATACCAGGAAA 1078
consensus_13711#1      AAATACAGGATTGCACTTGATCCCCAGCTNGAGGCTCTGATTGGGAGGCATACCAGGAAA 693
                       ***************************** ******************************

consensus_13711#0      CCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGAT 1138
consensus_13711#1      CCTTGGTCTAAGTTTATAAATCCAGAAAATAGGCATCTTGTCTCTCCAGAGGCTATTGAT 753
                       ************************************************************

consensus_13711#0      TTTCTTGATAAACTTATTCGCTTCG-ACCACCATGACAGGCTGACCGCTCGTGAAGCTAT 1197
consensus_13711#1      TTTCTTGATAAACTTATTCGCTTCGGACCACCATGACAGNCTGA---------------- 797
                       ************************* ************* ****                

consensus_13711#0      GGCGCATCCCTACTTTGAACAAGTGAGGGCAGCAGAAGACTGCAGAATGAGAACGTAACA 1257
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      TGAACGGAACGCCATCTGCTGCTGTTGGATTGCACTGGAAATCTGTTGCAGATTTGCTCC 1317
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      TTTGTTTTATTCTATTCTACTGAGGCAACGCAAAAGTTGTAGCATGTTGCGCCTTAGGTC 1377
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      CGCTTGCTGCTGAGCGGTGCCTAACATCCTTAAATTTTGAAACACATCATAAAGTGCCGA 1437
consensus_13711#1      ------------------------------------------------------------
                                                                                   

consensus_13711#0      GTCTATAAATCAGATTATCAGAGATAATCTCTTTTCAAAAAAAAA 1482
consensus_13711#1      ---------------------------------------------
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)