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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13715#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2218 fasta sequence
[CTCAATGATTGGATTGAGATATTTATTTATGATGATCACATCTGCACCTGTTTCCTTCAAGGGGATATTAAAGCTGCTGCCTTTTCTTGGACACTGAAGGAGGAGTATGATCAGGCTTTGGGTGGTGGCCACATGGCTGATTGTCTGCGCGGCGGCGCACCCCGGTGAGCAGCCGCTGTCGAGGATCGCTGTCGAGAGGACGGTCCTTGCCGTCAACGAATCGGCGCATGTCAAGGCATCGCCTTGGGTTCTTGGACTGAAGGGTCAGAACAGTGAATGGGTAGAGGTAGAGTTCTTCCATCCAAGCCCCTCCAATGACGACTGGATTGGAGTGTTTTCTCCAGCTAATTTTAGTGCTGCAATCTGTGAGCCTGAAAACAAGAGGCAGCGTCCCCCGGTGCTATGCACGGCACCTATCAAGTACCAATTTGCAAACTTCAATAATGATGGCTATAATAAGTCTGGGAAGGGCTACCTGAAGCTTCAGTTGATCAACCAGAGGGAAGATTTCTCATTTGCACTCTTTTCAGGTGGCCTATTGAAGCCGAAGCTAATTGCAGTCTCAAACAAGGTCGCATTTGCAAATCCAAAGGCGCCTGTTTACCCACGTTTGGCACAAGGGAAGTCTTGGAATGAAATGACAGTCACCTGGACAAGTGGATACGATATTAAAGAAGCTGTTCCTTTTGTCGAATGGGGTGCGAAAGGAGGCCGTAGTTTTCTTTCTCCAGCTGGAACATTGACATTCGACAGGAATAGCATGTGTGGTGCACCGGCACGAACTGTTGGATGGCGCCATCCTGGTTACATTCATACAAGTTACTTAAAAGATCTGTGGCCAGATTCACTGTATACCTACAGACTAGGTCATAGGCTACCAAACAGTACACTTATCTGGAGCAAGTCATACAGCTTCAAAGCATCACCTTATCCTGGACAAGATTCTTTGCAGCGAGTAGTCATATTCGGAGACATGGGAAAGGCAGAGGCAGATGGTTCAAATGAGTTCAATGACTTCCAGCCAGGTTCACTGAACACTACTTACCAGATCATCAGAGACCTGGAAAACATTGACATGGTTGTCCACATTGGGGATATTTGCTACGCAAATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCACAGATCGAACCGATTGCTTCGACTGTGCCATACATGATTGGCAGTGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCTTTCTACGGAAACCTTGATTCCGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTCCTGCCGAGAACCGTGCGAAATTCTGGTATGCGACAGACTACGGCATGTTCAGGTTCTGCATTGCCCATACAGAAGAGGACTGGAGGCCAGGGACCGAGCAGTACAAGTTCATCGAGCAATGCCTATCATCTGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCTCACCGCGTTCTTGGGTACTCATCCTGCTCCTACTATGAAGAACAGGGTACATTTGGGGAGCCGATGGGGCGAGACACAATAGAGGAGCTATTACAAAAGTACAGAGTTGATCTTGCCTTCTATGGTCATGTTCACAGCTATGAAAGAACATGTCCAGTTTATCAGGGTCAGTGTGTCGTTAACGCTTCGGATCACTACAACGGCCCATTCAAAGCGACGACGCATGTGGTCGTTGGAGGTGGTGGTGCCAGCCTTTCAGAATTCACCACTTCAAAGATCAAATGGAGTCACTACACAGACTTTGACTTCGGCTTCGTGAAGCTCACGGCTTTCAATCATTCATCCATGCTATTCGAGTACAAGAAGAGCCGCGACGGCAATGTGTATGATCATTTCACAATCTCACGCGATTACCGGGACATCCTGGCCTGCTCAGTTGACAATTGTCCTCGGACCACACTGGCTACCTAAGGCATGAACGGCTCTAGATGGGTGAGAATTGAGATTGGTTTGATGTGGCCTCTTAGAGAACTGTAGTTGCTGCACATTAGTTCTTTTTGGGACTGTACCAATAAATCTAATAAGCACAGAATTTTCTTGGCTGTGTATTTTGTTTTGTTGTAGCAGTAGATGAAATTCTGAATGGTTTTTGCTCTAACCTGGACACCTGATGATGAATAGGTTCAGAATGTCAGCCAGTTGCAGTGATTTACAAAAGTTCAGGGCTTGGCTGAGTAAAACTGAGATAAGGAAACGAGT]
[+] EMBL AK121432 [CTCAATGATTGGATTGAGATATTTATTTATGATGATCACATCTGCACCTGTTTCCTTCAAGGGGATATTAAAGCTGCTGCCTTTTCTTGGACACTGAAGGAGGAGTATGATCAGGCTTTGGGTGGTGGCCACATGGCTGATTGTCTGCGCGGCGGCGCACCCCGGTGAGCAGCCGCTGTCGAGGATCGCTGTCGAGAGGACGGTCCTTGCCGTCAACGAATCGGCGCATGTCAAGGCATCGCCTTGGGTTCTTGGACTGAAGGGTCAGAACAGTGAATGGGTAGAGGTAGAGTTCTTCCATCCAAGCCCCTCCAATGACGACTGGATTGGAGTGTTTTCTCCAGCTAATTTTAGTGCTGCAATCTGTGAGCCTGAAAACAAGAGGCAGCGTCCCCCGGTGCTATGCACGGCACCTATCAAGTACCAATTTGCAAACTTCAATAATGATGGCTATAATAAGTCTGGGAAGGGCTACCTGAAGCTTCAGTTGATCAACCAGAGGGAAGATTTCTCATTTGCACTCTTTTCAGGTGGCCTATTGAAGCCGAAGCTAATTGCAGTCTCAAACAAGGTCGCATTTGCAAATCCAAAGGCGCCTGTTTACCCACGTTTGGCACAAGGGAAGTCTTGGAATGAAATGACAGTCACCTGGACAAGTGGATACGATATTAAAGAAGCTGTTCCTTTTGTCGAATGGGGTGCGAAAGGAGGCCGTAGTTTTCTTTCTCCAGCTGGAACATTGACATTCGACAGGAATAGCATGTGTGGTGCACCGGCACGAACTGTTGGATGGCGCCATCCTGGTTACATTCATACAAGTTACTTAAAAGATCTGTGGCCAGATTCACTGTATACCTACAGACTAGGTCATAGGCTACCAAACAGTACACTTATCTGGAGCAAGTCATACAGCTTCAAAGCATCACCTTATCCTGGACAAGATTCTTTGCAGCGAGTAGTCATATTCGGAGACATGGGAAAGGCAGAGGCAGATGGTTCAAATGAGTTCAATGACTTCCAGCCAGGTTCACTGAACACTACTTACCAGATCATCAGAGACCTGGAAAACATTGACATGGTTGTCCACATTGGGGATATTTGCTACGCAAATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCACAGATCGAACCGATTGCTTCGACTGTGCCATACATGATTGGCAGTGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCTTTCTACGGAAACCTTGATTCCGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTCCTGCCGAGAACCGTGCGAAATTCTGGTATGCGACAGACTACGGCATGTTCAGGTTCTGCATTGCCCATACAGAAGAGGACTGGAGGCCAGGGACCGAGCAGTACAAGTTCATCGAGCAATGCCTATCATCTGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCTCACCGCGTTCTTGGGTACTCATCCTGCTCCTACTATGAAGAACAGGGTACATTTGGGGAGCCGATGGGGCGAGACACAATAGAGGAGCTATTACAAAAGTACAGAGTTGATCTTGCCTTCTATGGTCATGTTCACAGCTATGAAAGAACATGTCCAGTTTATCAGGGTCAGTGTGTCGTTAACGCTTCGGATCACTACAACGGCCCATTCAAAGCGACGACGCATGTGGTCGTTGGAGGTGGTGGTGCCAGCCTTTCAGAATTCACCACTTCAAAGATCAAATGGAGTCACTACACAGACTTTGACTTCGGCTTCGTGAAGCTCACGGCTTTCAATCATTCATCCATGCTATTCGAGTACAAGAAGAGCCGCGACGGCAATGTGTATGATCATTTCACAATCTCACGCGATTACCGGGACATCCTGGCCTGCTCAGTTGACAATTGTCCTCGGACCACACTGGCTACCTAAGGCATGAACGGCTCTAGATGGGTGAGAATTGAGATTGGTTTGATGTGGCCTCTTAGAGAACTGTAGTTGCTGCACATTAGTTCTTTTTGGGACTGTACCAATAAATCTAATAAGCACAGAATTTTCTTGGCTGTGTATTTTGTTTTGTTGTAGCAGTAGATGAAATTCTGAATGGTTTTTGCTCTAACCTGGACACCTGATGATGAATAGGTTCAGAATGTCAGCCAGTTGCAGTGATTTACAAAAGTTCAGGGCTTGGCTGAGTAAAACTGAGATAAGGAAACGAGT]
consensusID : consensus_13715#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2128 fasta sequence
[CTTGAAGTTGCTACCTTTTACTTGGTCTCTGAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGGGCCGCAGCTGCGGTGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTGCCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGACCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTGGAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGTATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATGGTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATTTCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATCCAAAGCTGGTTGCTGTCTCAAACAAGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTTGGAATGAAATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAGAAGCAGTTCCTTTCGTCGAATGGGGCGCGAAAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTGACAGAAATAGCATGTGTGGTGCACCGGCACGAACTGTCGGTTGGCGCCATCCTGGTTACATTCATACAAGCTACTTGAAAGAACTGT-GGCCAGATTCACTGTATACTTACAG-ACTTGGCCATAGGTTACCAAATGGTACTCACATCT-GGAGTAAGTCATACAGCTTCAAAGCATCACCTTATCCTGGGCAAGATTCCGTTCAGAGAGTAGTCATATTTGGAGACATGGGAAAGGCAGAGGCAGACGGTTCAAATGAGTTCAATGACTTCCAGCCAGGATCATTGAACACTACTTACCAGATCATCAGAGACCTGAAAAACATTGACATGGTTGTCCATATTGGGGATATTTGCTATGCAAATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCGCAGATCGAGCCAATTGCTTCGACTGTTCCATACATGATTGGCATGGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCATTCTATGGAAACCTTGACTCTGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTCCTGCTGAGAACCGTGCAAAATTATGGTATGCGACAGACTATGGCATGTTCAGGTTCTGCATTGCTAATACAGAAGAGGACTGGAGGCCAGGGACTGAGCAGTACAAGTTCATCGAGCAATGCCTATCGTCCGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCGCACCGAGTTCTCGGGTACTCATCCTGCACCTTTTATGAAGAAGAGGGTACATTTGAGGAACCGATGGGCCGAGAATCACTACAGGAGCTTTGGCAGAAGTACAAGGTTGACCTCGCCTTCTATGGCCATGTCCACAACTATGAAAGAACATGCCCAGTCTATCAGAATAAATGTGTTGTTAGTGGTTCAGATCATTACAGTGGTCCTTTCACCGCGACAACACATGTGGTCGTTGGAGGTGCTGGTGCTGGTACCTCCGACTCAGAATTCACCACTTCAAATATCAAATGGAGTTACTACAGGGACTTTGACTACGGTTTTGTCAAGCTCACAGCTTTAAATCATTCATCCTTATTGTTTGAGTACAAGAAAAGCAGTGACGGCAATGTGTATGATCATTTCACAATCTCACGTGATTACCGAGACATCCTGGCTTGTTCAATTGACAACTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACAGTTCTAGACAGGTTTACAGGTAGATTGATTGACAGGGCCTCAAAGAGCAATCTAGTTCCTGTACAAAGTCTTTTGGGACTATTCCAATAAATCATAATAAACACGGAATTTTCTTGACTGCGTACTTGGTTTTGTTGTACCAGTAGATGAAGTTCTGAATGTAATTTGCTCTTACTTAATGATAAATAGGTTCAGCATGGCAGCCAATTCCAACAAAAAAAAAAAAAAAAAATCGAGGAGA]
[+] EMBL AK073512 [CTTGAAGTTGCTACCTTTTACTTGGTCTCTGAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGGGCCGCAGCTGCGGTGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTGCCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGACCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTGGAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGTATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATGGTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATTTCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATCCAAAGCTGGTTGCTGTCTCAAACAAGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTTGGAATGAAATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAGAAGCAGTTCCTTTCGTCGAATGGGGCGCGAAAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTGACAGAAATAGCATGTGTGGTGCACCGGCACGAACTGTCGGTTGGCGCCATCCTGGTTACATTCATACAAGCTACTTGAAAGAACTGT GGCCAGATTCACTGTATACTTACAG ACTTGGCCATAGGTTACCAAATGGTACTCACATCT GGAGTAAGTCATACAGCTTCAAAGCATCACCTTATCCTGGGCAAGATTCCGTTCAGAGAGTAGTCATATTTGGAGACATGGGAAAGGCAGAGGCAGACGGTTCAAATGAGTTCAATGACTTCCAGCCAGGATCATTGAACACTACTTACCAGATCATCAGAGACCTGAAAAACATTGACATGGTTGTCCATATTGGGGATATTTGCTATGCAAATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCGCAGATCGAGCCAATTGCTTCGACTGTTCCATACATGATTGGCATGGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCATTCTATGGAAACCTTGACTCTGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTCCTGCTGAGAACCGTGCAAAATTATGGTATGCGACAGACTATGGCATGTTCAGGTTCTGCATTGCTAATACAGAAGAGGACTGGAGGCCAGGGACTGAGCAGTACAAGTTCATCGAGCAATGCCTATCGTCCGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCGCACCGAGTTCTCGGGTACTCATCCTGCACCTTTTATGAAGAAGAGGGTACATTTGAGGAACCGATGGGCCGAGAATCACTACAGGAGCTTTGGCAGAAGTACAAGGTTGACCTCACCTTCTATGGCCATGTCCACAACTATGAAAGAACATGCCCAGTCTATCAGAATAAATGTGTTGTTAGTGGTTCAGATCATTACAGTGGTCCTTTCACCGCGACAACACATGTGGTCGTTGGAGGTGCTGGTGCTGGTACCTCCGACTCAGAATTCACCACTTCAAATATCAAATGGAGTTACTACAGGGACTTTGACTACGGTTTTGTCAAGCTCACAGCTTTAAATCATTCATCCTTATTGTTTGAGTACAAGAAAAGCAGTGACGGCAATGTGTATGATCATTTCACAATCTCACGTGATTACCGAGACATCCTGGCTTGTTCAATTGACAACTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACAGTTCTAGACAGGTTTACAGGTAGATTGATTGACAGGGCCTCAAAGAGCAATCTAGTTCCTGTACAAAGTCTTTTGGGACTATTCCAATAAATCATAATAAACACGGAATTTTC ]
[+] EMBL C74500 [ ATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTTGGAATGAAATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAGAAGCAGTTCCTTTCGTCGAATGGGGCGCGAAAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTGACAGAAATAGCATGTGTGGTGCACCGGCACGAACTGTCGGTTGGCGCCATCCTGGTTACATTCATACAAGCTACTTGAAAGAACTGTGGGCCAGATTCACTGTATACTTACAGAATTTGGCCATAGGTTACCAAATGGNACCCACATCTGGGGGTAAGTAATAAAGCTT ]
[-] EMBL CB632552 [ GTATGCGACAGACTATGGCATGTTCAGGTTCTGCATTGCTAATACAGAAGAGGACTGGAGGCCAGGGACTGAGCAGTACAAGTTCATCGAGCAATGCCTATCGTCCGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCGCACCGAGTTCTCGGGTACTCATCCTGCACCTTTTATGAAGAAGAGGGTACATTTGAGGAACCGATGGGCCGAGAATCACTACAGGAGCTTTGGCAGAAGTACAAGGTTGACCTCGCCTTCTATGGCCATGTCCACAACTATGAAAGAACATGCCCAGTCTATCAGAATAAATGTGTTGTTAGTGGTTCAGATCATTACAGTGGTCCTTTCACCGCGACAACACATGTGGTCGTTGGAGGTGCTGGTGCTGGTACCTCCGACTCAGAATTCACCACTTCAAATATCAAATGGAGTTACTACAGGGACTTTGACTACGGTTTTGTCAAGCTCACAGCTTTAAATCATTCATCCTTATTGTTTGAGTACAAGAAAAGCAGTGACGGCAATGTGTATGATCATTTCACAATCTCACGTGATTACCGAGACATCCTGGCTTGTTCAATTGACAACTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACAGTTCTAGACAGGTTTACAGGTAGATTGATTGACAGGGCCTCAAAGAGCAATCTAGTTCCTGTACAAAGTCTTTTGGGACTATTCCAAGAAATCATAATAAACACGG ]
[-] EMBL CB633972 [ CATCGAGCAATGCCTATCGTCCGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCGCACCGAGTTCTCGGGTACTCATCCTGCACCTTTTATGAAGAAGAGGGTACATTTGAGGAACCGATGGGCCGAGAATCACTACAGGAGCTTTGGCAGAAGTACAAGGTTGACCTCGCCTTCTATGGCCATGTCCACAACTATGAAAGAACATGCCCAGTCTATCAGAATAAATGTGTTGTTAGTGGTTCAGATCATTACAGTGGTCCTTTCACCGCGACAACACATGTGGTCGTTGGAGGTGCTGGTGCTGGTACCTCCGACTCAGAATTCACCACTTCAAATATCAAATGGAGTTACTACAGGGACTTTGACTACGGTTTTGTCAAGCTCACAGCTTTAAATCATTCATCCTTATTGTTTGAGTACAAGAAAAGCAGTGACGGCAATGTGTATGATCATTTCACAATCTCACGTGATTACCGAGACATCCTGGCTTGTTCAATTGACAACTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACAGTTCTAGACAGGTTTACAGGTAGATTGATTGACAGGGCCTCAAAGAGCAATCTAGTTCCTGTACAAAGTCTTTTGGGACTATTCCAATAAATCATAATAAACACGGAATTTTCTTGACTGCGTACTTGGTTTTGTTGTACCAGTAGATGAAGTTCTGAATGTAATTTGCTCTTACTTAATGATAAATAGGTTCAGCATGGCAGCCAATTCCAACAAAAAAAAAAAAAAAAAATCGAGGAGA]
[-] EMBL CB634173 [ AGCAGCCATGGCTCATATTCCTTGCGCACCGAGTTTTCGGGTACTCATCCTGCCCCTTTTATGAAGAAGAGGGTACATTTGAGGAACCGATGGGCCGAGAATCACTACAGGAGCTTTGGCAGAAGTACAAGGTTGACCTCGCCTTTTATGGCCATGTCCCCAACTATGAAAGAACATGCCCAGTTTATCAGAATAAAAGTGTTGTTAGTGGTTCAGATCATTACAGTGGTCCTTTCCCCGGGACAACACATGTGGTCGTTGGAGGTGCTGGTGCTGGTACCTCCGACTCAGAATTCCCCCCTTCAAATATCAAATGGAGTTACTACAGGGACTTTGACTACGGTTTTGTCAAGCTCCCAGCTTTAAATCATTCATCCTTATTGTTTGAGTACAAGAAAAGCAGTGACGGCAATGTGTATGATCATTTCCCAATTTCACGTGATTACCGAGACATCCTGGCTTGTTCAATTGACAACTGTCCTCGGGCCCCCCTGGCTACCTAAAGCATGAACAGTTTTAGACAGGTTTACAGGTAGATTGATTGACAGGGCCTCAAAGAGCAATTTAGTTCCTGTACAAAGTTTTTTGGGGCTATTCCAATAAATCATAATAAACCCGGAATTT ]
[+] EMBL AU094803 [ anAATCTCACGTGATTACCGAGACATCCTGGCTTGTTCAATTGACAACTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACAGTTCTAGNCAGGTTTACAGGTAGATTGATTGACAGGGCCTCAAAGNGCAATCTAGTTCCTGTACAAAGTCTTTTGGGACTATTCCAATAAATCATAATAAACACGGAATTTTCTTGA TGCGTACTTTGTTTTGTTGTACCAGTAGATNAAATTCTGAATGTAATTTGCTCTTACTTAATGATAAATAGGTTCAGCAaaa ]
consensusID : consensus_13715#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2120 fasta sequence
[CAGGCAGGCGATGAATTTTAGTCTTTTAGGCATAGTTCATCACTGATTCCGGCCGGGCAATTTTCAGGACACTGAAGGAGGAGTATGATCAGGCTTTGGGTGGTGGCCACATGGCTGATTGTCTGCGCGGCGGCGCACCCCGGTGAGCAGCCGCTGTCGAGGATCGCTGTCGAGAGGACGGTCCTTGCCGTCAACGAATCGGCGCATGTCAAGGCATCGCCTTGGGTTCTTGGACTGAAGGGTCAGAACAGTGAATGGGTAGAGGTAGAGTTCTTCCATCCAAGCCCCTCCAATGACGACTGGATTGGAGTGTTTTCTCCAGCTAATTTTAGTGCTGCAATCTGTGAGCCTGAAAACAAGAGGCAGCGTCCCCCGGTGCTATGCACGGCACCTATCAAGTACCAATTTGCAAACTTCAATAATGATGGCTATAATAAGTCTGGGAAGGGCTACCTGAAGCTTCAGTTGATCAACCAGAGGGAAGATTTCTCATTTGCACTCTTTTCAGGTGGCCTATTGAAGCCGAAGCTAATTGCAGTCTCAAACAAGGTCGCATTTGCAAATCCAAAGGCGCCTGTTTACCCACGTTTGGCACAAGGGAAGTCTTGGAATGAAATGACAGTCACCTGGACAAGTGGATACGATATTAAAGAAGCTGTTCCTTTTGTCGAATGGGGTGCGAAAGGAGGCCGTAGTTTTCTTTCTCCAGCTGGAACATTGACATTCGACAGGAATAGCATGTGTGGTGCACCGGCACGAACTGTTGGATGGCGCCATCCTGGTTACATTCATACAAGTTACTTAAAAGATCTGTGGCCAGATTCACTGTATACCTACAGACTAGGTCATAGGCTACCAAACAGTACACTTATCTGGAGCAAGTCATACAGCTTCAAAGCATCACCTTATCCTGGACAAGATTCTTTGCAGCGAGTAGTCATATTCGGAGACATGGGAAAGGCAGAGGCAGATGGTTCAAATGAGTTCAATGACTTCCAGCCAGGTTCACTGAACACTACTTACCAGATCATCAGAGACCTGGAAAACATTGACATGGTTGTCCACATTGGGGATATTTGCTACGCAAATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCACAGATCGAACCGATTGCTTCGACTGTGCCATACATGATTGGCAGTGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCTTTCTACGGAAACCTTGATTCCGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTCCTGCCGAGAACCGTGCGAAATTCTGGTATGCGACAGACTACGGCATGTTCAGGTTCTGCATTGCCCATACAGAAGAGGACTGGAGGCCAGGGACCGAGCAGTACAAGTTCATCGAGCAATGCCTATCATCTGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCTCACCGCGTTCTTGGGTACTCATCCTGCTCCTACTATGAAGAACAGGGTACATTTGGGGAGCCGATGGGGCGAGACACAATAGAGGAGCTATTACAAAAGTACAGAGTTGATCTTGCCTTCTATGGTCATGTTCACAGCTATGAAAGAACATGTCCAGTTTATCAGGGTCAGTGTGTCGTTAACGCTTCGGATCACTACAACGGCCCATTCAAAGCGACGACGCATGTGGTCGTTGGAGGTGGTGGTGCCAGCCTTTCAGAATTCACCACTTCAAAGATCAAATGGAGTCACTACACAGACTTTGACTTCGGCTTCGTGAAGCTCACGGCTTTCAATCATTCATCCATGCTATTCGAGTACAAGAATAGCCGCGACGGCAATGTGTATGATCATTTCACAATCTCACGCGATTACCGGGACATCCTGGCCTGCTCAGTTGACAATTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACGGCTCTAGATGGGTGAGAATTGAGATTGGTTTGATGTGGCCTCTTAGAGAACTGTAGTTGCTGCACATTAGTTCTTTTTGGGACTGTACCAATAAATCTAATAAGCACAGAATTTTCTTGGCTGTGTATTTTGTTTTGTTGTAGCAGTAGATGAAATTCTGAATGGTTTTTGCTCTAACCTGGACACCTGATGATGAATAGGT]
[+] EMBL AK065128 [CAGGCAGGCGATGAATTTTAGTCTTTTAGGCATAGTTCATCACTGATTCCGGCCGGGCAATTTTCAGGACACTGAAGGAGGAGTATGATCAGGCTTTGGGTGGTGGCCACATGGCTGATTGTCTGCGCGGCGGCGCACCCCGGTGAGCAGCCGCTGTCGAGGATCGCTGTCGAGAGGACGGTCCTTGCCGTCAACGAATCGGCGCATGTCAAGGCATCGCCTTGGGTTCTTGGACTGAAGGGTCAGAACAGTGAATGGGTAGAGGTAGAGTTCTTCCATCCAAGCCCCTCCAATGACGACTGGATTGGAGTGTTTTCTCCAGCTAATTTTAGTGCTGCAATCTGTGAGCCTGAAAACAAGAGGCAGCGTCCCCCGGTGCTATGCACGGCACCTATCAAGTACCAATTTGCAAACTTCAATAATGATGGCTATAATAAGTCTGGGAAGGGCTACCTGAAGCTTCAGTTGATCAACCAGAGGGAAGATTTCTCATTTGCACTCTTTTCAGGTGGCCTATTGAAGCCGAAGCTAATTGCAGTCTCAAACAAGGTCGCATTTGCAAATCCAAAGGCGCCTGTTTACCCACGTTTGGCACAAGGGAAGTCTTGGAATGAAATGACAGTCACCTGGACAAGTGGATACGATATTAAAGAAGCTGTTCCTTTTGTCGAATGGGGTGCGAAAGGAGGCCGTAGTTTTCTTTCTCCAGCTGGAACATTGACATTCGACAGGAATAGCATGTGTGGTGCACCGGCACGAACTGTTGGATGGCGCCATCCTGGTTACATTCATACAAGTTACTTAAAAGATCTGTGGCCAGATTCACTGTATACCTACAGACTAGGTCATAGGCTACCAAACAGTACACTTATCTGGAGCAAGTCATACAGCTTCAAAGCATCACCTTATCCTGGACAAGATTCTTTGCAGCGAGTAGTCATATTCGGAGACATGGGAAAGGCAGAGGCAGATGGTTCAAATGAGTTCAATGACTTCCAGCCAGGTTCACTGAACACTACTTACCAGATCATCAGAGACCTGGAAAACATTGACATGGTTGTCCACATTGGGGATATTTGCTACGCAAATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCACAGATCGAACCGATTGCTTCGACTGTGCCATACATGATTGGCAGTGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCTTTCTACGGAAACCTTGATTCCGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTCCTGCCGAGAACCGTGCGAAATTCTGGTATGCGACAGACTACGGCATGTTCAGGTTCTGCATTGCCCATACAGAAGAGGACTGGAGGCCAGGGACCGAGCAGTACAAGTTCATCGAGCAATGCCTATCATCTGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCTCACCGCGTTCTTGGGTACTCATCCTGCTCCTACTATGAAGAACAGGGTACATTTGGGGAGCCGATGGGGCGAGACACAATAGAGGAGCTATTACAAAAGTACAGAGTTGATCTTGCCTTCTATGGTCATGTTCACAGCTATGAAAGAACATGTCCAGTTTATCAGGGTCAGTGTGTCGTTAACGCTTCGGATCACTACAACGGCCCATTCAAAGCGACGACGCATGTGGTCGTTGGAGGTGGTGGTGCCAGCCTTTCAGAATTCACCACTTCAAAGATCAAATGGAGTCACTACACAGACTTTGACTTCGGCTTCGTGAAGCTCACGGCTTTCAATCATTCATCCATGCTATTCGAGTACAAGAATAGCCGCGACGGCAATGTGTATGATCATTTCACAATCTCACGCGATTACCGGGACATCCTGGCCTGCTCAGTTGACAATTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACGGCTCTAGATGGGTGAGAATTGAGATTGGTTTGATGTGGCCTCTTAGAGAACTGTAGTTGCTGCACATTAGTTCTTTTTGGGACTGTACCAATAAATCTAATAAGCACAGAATTTTCTTGGCTGTGTATTTTGTTTTGTTGTAGCAGTAGATGAAATTCTGAATGGTTTTTGCTCTAACCTGGACACCTGATGATGAATAGGT]
[-] EMBL AU225360 [ AGTGTGTCGTTAACGCTTCGGATCACTACAACGGCCCATTCAAAGCGACGACGCATGTGGTCGTTGGAGGTGGTGGTGCCAGCCTTTCAGAATTCACCACTTCAAAGATCAAATGGAGTCACTACACAGACTTTGACTTCGGCTTCGTGAAGCTCACGGCTTTCAATCATTCATCCATGCTATTCGAGTACAAGAAGAGCCGCGACGGCAATGTGTATGATCATTTCACAATCTCACGCGATTACCGGGACATCCTGGCCTGCTCAGTTGACAATTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACGGCTCTAGATGGGTGAGAATTGAGATTGGTTTGATGTGGCCTCTTAGAGAACTGTAGTTGCTGCACATTAGTTCTTTTTGGGACTGTACCAATAAATCTAATAAGCACAGAATTTTCTTGGCTagcggc ]
consensusID : consensus_13715#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 937 fasta sequence
[GGTCCCTTGCTCTCTCTTTCTTGGAGATTGCTGCAGTCTATAAGGAATTTCAGATAGGAGGTGGATTCCAGGCTAAGTTCATCACTGACTCTGGCTGGGTAATTTTTTTTTCAGGTCTCTGAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGCGCCGCAGCTGCGGCGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTGCCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGACCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTGGAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGTATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATGGTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATTTCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATCCAAAGCTGGTTGCTGTCTCAAACAAGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTTGGAATGAAATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAAAAGCAGTTCCTTTCGTCGAATGGGGCGCGANAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTGACAGAAATAGCATGTGTGGTGCACCGGCACGAACTGTCGGTTGGCGCCATCCTGGTTACATTCATACAAGCTACTTGAAAGAACTGTGGCCAGATTCACTGTATACTTACAGACTTGGCCATAGATTACCAAATGGTACTCACATCTGGAGTAAGTC]
[+] EMBL CB632551 [GGTCCCTTGCTCTCTCTTTCTTGGAGATTGCTGCAGTCTATAAGGAATTTCAGATAGGAGGTGGATTCCAGGCTAAGTTCATCACTGACTCTGGCTGGGTAATTTTTTTTTCAGGTCTCTGAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGCGCCGCAGCTGCGGCGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTGCCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGACCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTGGAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGTATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATGGTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATTTCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATCCAAAGCTGGTTGCTGTCTCAAACAAGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTTGGAATGAA TAACTTGGACAAGTGGGTACGA ]
[+] EMBL CB631063 [ CTTGCTCTCTCTTTCTTGGAGATTGCTGCAGTCTATAAGGAATTTCAGATAGGAGGTGGATTCCAGGCTAAGTTCATCACTGACTCTGGCTGGGTAATTTTTTTTTCAGGTCTCTGAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGCGCCGCAGCTGCGGCGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTGCCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGACCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTGGAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGTATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATGGTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATTTCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATCCAAAGCTGGTTGCTGTCTCAAACAAGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTTGGAATGAAATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAAAAGCAGTTCCTTTCGTCGAATGGGGCGCGANAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTGACAGAAATAGCATGTGTGGTGCACCGGCACGAACTGTCGGTTG ]
[+] EMBL CB638276 [ TCTTTCTTGGAGATTGCTGCCGTCTATAAGGAATTTCAGATAGGAGGTGGATTCCAGGCTAAGTTCATCACTGACTCTGGCTGGGTAA TTTTTTTTCAGGTCTCTGAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGGGCCGCAGCTGCGGTGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTGCCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGACCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTGGAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGTATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATGGTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATTTCTCATTTGCTCTTTTTTCT ]
[+] EMBL CB633971 [ acttGGTCTCTGAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGCGCCGCAGCTGCGGCGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTGCCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGACCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTGGAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGTATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATGGTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATTTCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATCCAAAGCTGGTTGCTGTCTCAAACAAGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTTGGAATGAAATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAAAAGCAGTTCCTTTCGTCGAATGGGGCGCGAAAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTGACAGAAATAGCATGTGTGGTGCACCGGCACGAACTGTCGGTTGGCGCCATCCTGGTTACATTCATACAAGCTACTTGAAAGAACTGTGGCCAGATTCACTGTATACTTACAGACTTGGCCATAGATTACCAAATGGTACTCACATCTGGAGTAAGTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13715#1 ------------------------------------------------------------
consensus_13715#3 GGTCCCTTGCTCTCTCTTTCTTGGAGATTGCTGCAGTCTATAAGGAATTTCAGATAGGAG 60
consensus_13715#0 -------------------------CTCAATGATTGGATTGAGATATTTATTTATGATGA 35
consensus_13715#2 ---------------------------------------CAGGCAGGCGATGAATTTTAG 21
consensus_13715#1 ----------------------------CTTGAAGTTGCTACCTTTTACTT--GGTCTCT 30
consensus_13715#3 GTGGATTCCAGGCTAAGTTCATCACTGACTCTGGCTGGGTAATTTTTTTTTCAGGTCTCT 120
consensus_13715#0 TCACATCTGCACCTGTTTCCTTCAAGGGGATATTAAAGCTGCTGCCTTTTCTTGGACACT 95
consensus_13715#2 TCTTTTAGGCATA---GTTCATCACTG----ATTCCGGCCGG-GCAATTTTCAGGACACT 73
* * ** * **
consensus_13715#1 GAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGGGCCGCAG 90
consensus_13715#3 GAAGGAGGAGTATGATCAGGCTGTGGGTGGTGGTCACATGGCTGGTTCTTTGCGCCGCAG 180
consensus_13715#0 GAAGGAGGAGTATGATCAGGCTTTGGGTGGTGGCCACATGGCTGATTGTCTGCG------ 149
consensus_13715#2 GAAGGAGGAGTATGATCAGGCTTTGGGTGGTGGCCACATGGCTGATTGTCTGCG------ 127
********************** ********** ********** ** * ** *
consensus_13715#1 CTGCGGTGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTG 150
consensus_13715#3 CTGCGGCGCACCCCGGGGAGCAGCCGCTGTCGAGGATTGCCGTCGAGAGGATGGTCCTTG 240
consensus_13715#0 CGGCGGCGCACCCCGGTGAGCAGCCGCTGTCGAGGATCGCTGTCGAGAGGACGGTCCTTG 209
consensus_13715#2 CGGCGGCGCACCCCGGTGAGCAGCCGCTGTCGAGGATCGCTGTCGAGAGGACGGTCCTTG 187
* **** ********* ******************** ** ********** ********
consensus_13715#1 CCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGA 210
consensus_13715#3 CCGTCAACGAGTCGGCACATGTCAGGGCGTCCCCTTTGGTTCTTGGGCTGAAGGGTGAGA 300
consensus_13715#0 CCGTCAACGAATCGGCGCATGTCAAGGCATCGCCTTGGGTTCTTGGACTGAAGGGTCAGA 269
consensus_13715#2 CCGTCAACGAATCGGCGCATGTCAAGGCATCGCCTTGGGTTCTTGGACTGAAGGGTCAGA 247
********** ***** ******* *** ** **** ********* ********* ***
consensus_13715#1 CCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTG 270
consensus_13715#3 CCAATGAATGGGTAGAGGTAGAGTTCTTCAATCCAAACCCCTCCAATACTGACTGGGTTG 360
consensus_13715#0 ACAGTGAATGGGTAGAGGTAGAGTTCTTCCATCCAAGCCCCTCCAATGACGACTGGATTG 329
consensus_13715#2 ACAGTGAATGGGTAGAGGTAGAGTTCTTCCATCCAAGCCCCTCCAATGACGACTGGATTG 307
** ************************* ****** ********** ****** ***
consensus_13715#1 GAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGT 330
consensus_13715#3 GAGTGTTTTCTCCTGCTGATTTTAGTTCTGCAATCTGTGAGGCTTATGGTGTTCCACAGT 420
consensus_13715#0 GAGTGTTTTCTCCAGCTAATTTTAGTGCTGCAATCTGTGAGCCTGAAAACAAGAGGCAGC 389
consensus_13715#2 GAGTGTTTTCTCCAGCTAATTTTAGTGCTGCAATCTGTGAGCCTGAAAACAAGAGGCAGC 367
************* *** ******** ************** ** * ***
consensus_13715#1 ATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATG 390
consensus_13715#3 ATTACCCAATGCTCTGCACAGCACCTATCAAGTACCAATATGCAAACTTCAATAATAATG 480
consensus_13715#0 GTCCCCCGGTGCTATGCACGGCACCTATCAAGTACCAATTTGCAAACTTCAATAATGATG 449
consensus_13715#2 GTCCCCCGGTGCTATGCACGGCACCTATCAAGTACCAATTTGCAAACTTCAATAATGATG 427
* *** **** ***** ******************* **************** ***
consensus_13715#1 GTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATT 450
consensus_13715#3 GTTATAGTAAGTCTGGGAAGGGCAAACTGAAGCTTCAGTTGATCAACCAGAGGGAGGATT 540
consensus_13715#0 GCTATAATAAGTCTGGGAAGGGCTACCTGAAGCTTCAGTTGATCAACCAGAGGGAAGATT 509
consensus_13715#2 GCTATAATAAGTCTGGGAAGGGCTACCTGAAGCTTCAGTTGATCAACCAGAGGGAAGATT 487
* **** **************** * ***************************** ****
consensus_13715#1 TCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATCCAAAGCTGGTTGCTGTCTCAAACA 510
consensus_13715#3 TCTCATTTGCTCTTTTTTCTGGTGGCCTCGAGAATCCAAAGCTGGTTGCTGTCTCAAACA 600
consensus_13715#0 TCTCATTTGCACTCTTTTCAGGTGGCCTATTGAAGCCGAAGCTAATTGCAGTCTCAAACA 569
consensus_13715#2 TCTCATTTGCACTCTTTTCAGGTGGCCTATTGAAGCCGAAGCTAATTGCAGTCTCAAACA 547
********** ** ***** ******** *** ** ***** **** **********
consensus_13715#1 AGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTT 570
consensus_13715#3 AGATCGCATTTGCGAATCCGAAGGCGCCTGTTTACCCACGTTTAGCTCAAGGGAAGTCTT 660
consensus_13715#0 AGGTCGCATTTGCAAATCCAAAGGCGCCTGTTTACCCACGTTTGGCACAAGGGAAGTCTT 629
consensus_13715#2 AGGTCGCATTTGCAAATCCAAAGGCGCCTGTTTACCCACGTTTGGCACAAGGGAAGTCTT 607
** ********** ***** *********************** ** *************
consensus_13715#1 GGAATGAAATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAGAAGCAGTTCCTTTCG 630
consensus_13715#3 GGAATGAAATGACAGTAACTTGGACAAGTGGGTACGATTTTAAAAAAGCAGTTCCTTTCG 720
consensus_13715#0 GGAATGAAATGACAGTCACCTGGACAAGTGGATACGATATTAAAGAAGCTGTTCCTTTTG 689
consensus_13715#2 GGAATGAAATGACAGTCACCTGGACAAGTGGATACGATATTAAAGAAGCTGTTCCTTTTG 667
**************** ** *********** ****** ***** **** ******** *
consensus_13715#1 TCGAATGGGGCGCGAAAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTG 690
consensus_13715#3 TCGAATGGGGCGCGANAGGGGGACAACGGGTCCTTTCTCCAGCTGGAACATTAACATTTG 780
consensus_13715#0 TCGAATGGGGTGCGAAAGGAGGCCGTAGTTTTCTTTCTCCAGCTGGAACATTGACATTCG 749
consensus_13715#2 TCGAATGGGGTGCGAAAGGAGGCCGTAGTTTTCTTTCTCCAGCTGGAACATTGACATTCG 727
********** **** *** ** * * * ******************** ***** *
consensus_13715#1 ACAGAAATAGCATGTGTGGTGCACCGGCACGAACTGTCGGTTGGCGCCATCCTGGTTACA 750
consensus_13715#3 ACAGAAATAGCATGTGTGGTGCACCGGCACGAACTGTCGGTTGGCGCCATCCTGGTTACA 840
consensus_13715#0 ACAGGAATAGCATGTGTGGTGCACCGGCACGAACTGTTGGATGGCGCCATCCTGGTTACA 809
consensus_13715#2 ACAGGAATAGCATGTGTGGTGCACCGGCACGAACTGTTGGATGGCGCCATCCTGGTTACA 787
**** ******************************** ** *******************
consensus_13715#1 TTCATACAAGCTACTTGAAAGAACTGTGGCCAGATTCACTGTATACTTACAGACTTGGCC 810
consensus_13715#3 TTCATACAAGCTACTTGAAAGAACTGTGGCCAGATTCACTGTATACTTACAGACTTGGCC 900
consensus_13715#0 TTCATACAAGTTACTTAAAAGATCTGTGGCCAGATTCACTGTATACCTACAGACTAGGTC 869
consensus_13715#2 TTCATACAAGTTACTTAAAAGATCTGTGGCCAGATTCACTGTATACCTACAGACTAGGTC 847
********** ***** ***** *********************** ******** ** *
consensus_13715#1 ATAGGTTACCAAATGGTACTCACATCTGGAGTAAGTCATACAGCTTCAAAGCATCACCTT 870
consensus_13715#3 ATAGATTACCAAATGGTACTCACATCTGGAGTAAGTC----------------------- 937
consensus_13715#0 ATAGGCTACCAAACAGTACACTTATCTGGAGCAAGTCATACAGCTTCAAAGCATCACCTT 929
consensus_13715#2 ATAGGCTACCAAACAGTACACTTATCTGGAGCAAGTCATACAGCTTCAAAGCATCACCTT 907
**** ******* **** * ******** *****
consensus_13715#1 ATCCTGGGCAAGATTCCGTTCAGAGAGTAGTCATATTTGGAGACATGGGAAAGGCAGAGG 930
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 ATCCTGGACAAGATTCTTTGCAGCGAGTAGTCATATTCGGAGACATGGGAAAGGCAGAGG 989
consensus_13715#2 ATCCTGGACAAGATTCTTTGCAGCGAGTAGTCATATTCGGAGACATGGGAAAGGCAGAGG 967
consensus_13715#1 CAGACGGTTCAAATGAGTTCAATGACTTCCAGCCAGGATCATTGAACACTACTTACCAGA 990
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 CAGATGGTTCAAATGAGTTCAATGACTTCCAGCCAGGTTCACTGAACACTACTTACCAGA 1049
consensus_13715#2 CAGATGGTTCAAATGAGTTCAATGACTTCCAGCCAGGTTCACTGAACACTACTTACCAGA 1027
consensus_13715#1 TCATCAGAGACCTGAAAAACATTGACATGGTTGTCCATATTGGGGATATTTGCTATGCAA 1050
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 TCATCAGAGACCTGGAAAACATTGACATGGTTGTCCACATTGGGGATATTTGCTACGCAA 1109
consensus_13715#2 TCATCAGAGACCTGGAAAACATTGACATGGTTGTCCACATTGGGGATATTTGCTACGCAA 1087
consensus_13715#1 ATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCGCAGATCGAGCCAATTGCTTCGACTG 1110
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 ATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCACAGATCGAACCGATTGCTTCGACTG 1169
consensus_13715#2 ATGGTTACTTGTCGCAGTGGGATCAGTTCACTGCACAGATCGAACCGATTGCTTCGACTG 1147
consensus_13715#1 TTCCATACATGATTGGCATGGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCATTCT 1170
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 TGCCATACATGATTGGCAGTGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCTTTCT 1229
consensus_13715#2 TGCCATACATGATTGGCAGTGGTAATCATGAGAGGGATTGGCCTGGAACTGGTTCTTTCT 1207
consensus_13715#1 ATGGAAACCTTGACTCTGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTC 1230
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 ACGGAAACCTTGATTCCGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTC 1289
consensus_13715#2 ACGGAAACCTTGATTCCGGAGGAGAATGTGGTGTTCCTGCTCAAACTGTATTCTACACTC 1267
consensus_13715#1 CTGCTGAGAACCGTGCAAAATTATGGTATGCGACAGACTATGGCATGTTCAGGTTCTGCA 1290
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 CTGCCGAGAACCGTGCGAAATTCTGGTATGCGACAGACTACGGCATGTTCAGGTTCTGCA 1349
consensus_13715#2 CTGCCGAGAACCGTGCGAAATTCTGGTATGCGACAGACTACGGCATGTTCAGGTTCTGCA 1327
consensus_13715#1 TTGCTAATACAGAAGAGGACTGGAGGCCAGGGACTGAGCAGTACAAGTTCATCGAGCAAT 1350
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 TTGCCCATACAGAAGAGGACTGGAGGCCAGGGACCGAGCAGTACAAGTTCATCGAGCAAT 1409
consensus_13715#2 TTGCCCATACAGAAGAGGACTGGAGGCCAGGGACCGAGCAGTACAAGTTCATCGAGCAAT 1387
consensus_13715#1 GCCTATCGTCCGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCGCACCGAGTTC 1410
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 GCCTATCATCTGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCTCACCGCGTTC 1469
consensus_13715#2 GCCTATCATCTGTCGACAGGCAGAAGCAGCCATGGCTCATATTCCTTGCTCACCGCGTTC 1447
consensus_13715#1 TCGGGTACTCATCCTGCACCTTTTATGAAGAAGAGGGTACATTTGAGGAACCGATGGGCC 1470
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 TTGGGTACTCATCCTGCTCCTACTATGAAGAACAGGGTACATTTGGGGAGCCGATGGGGC 1529
consensus_13715#2 TTGGGTACTCATCCTGCTCCTACTATGAAGAACAGGGTACATTTGGGGAGCCGATGGGGC 1507
consensus_13715#1 GAGAATCACTACAGGAGCTTTGGCAGAAGTACAAGGTTGACCTCGCCTTCTATGGCCATG 1530
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 GAGACACAATAGAGGAGCTATTACAAAAGTACAGAGTTGATCTTGCCTTCTATGGTCATG 1589
consensus_13715#2 GAGACACAATAGAGGAGCTATTACAAAAGTACAGAGTTGATCTTGCCTTCTATGGTCATG 1567
consensus_13715#1 TCCACAACTATGAAAGAACATGCCCAGTCTATCAGAATAAATGTGTTGTTAGTGGTTCAG 1590
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 TTCACAGCTATGAAAGAACATGTCCAGTTTATCAGGGTCAGTGTGTCGTTAACGCTTCGG 1649
consensus_13715#2 TTCACAGCTATGAAAGAACATGTCCAGTTTATCAGGGTCAGTGTGTCGTTAACGCTTCGG 1627
consensus_13715#1 ATCATTACAGTGGTCCTTTCACCGCGACAACACATGTGGTCGTTGGAGGTGCTGGTGCTG 1650
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 ATCACTACAACGGCCCATTCAAAGCGACGACGCATGTGGTCGTTGGAGGTGGTGGTGCCA 1709
consensus_13715#2 ATCACTACAACGGCCCATTCAAAGCGACGACGCATGTGGTCGTTGGAGGTGGTGGTGCCA 1687
consensus_13715#1 GTACCTCCGACTCAGAATTCACCACTTCAAATATCAAATGGAGTTACTACAGGGACTTTG 1710
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 G------CCTTTCAGAATTCACCACTTCAAAGATCAAATGGAGTCACTACACAGACTTTG 1763
consensus_13715#2 G------CCTTTCAGAATTCACCACTTCAAAGATCAAATGGAGTCACTACACAGACTTTG 1741
consensus_13715#1 ACTACGGTTTTGTCAAGCTCACAGCTTTAAATCATTCATCCTTATTGTTTGAGTACAAGA 1770
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 ACTTCGGCTTCGTGAAGCTCACGGCTTTCAATCATTCATCCATGCTATTCGAGTACAAGA 1823
consensus_13715#2 ACTTCGGCTTCGTGAAGCTCACGGCTTTCAATCATTCATCCATGCTATTCGAGTACAAGA 1801
consensus_13715#1 AAAGCAGTGACGGCAATGTGTATGATCATTTCACAATCTCACGTGATTACCGAGACATCC 1830
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 AGAGCCGCGACGGCAATGTGTATGATCATTTCACAATCTCACGCGATTACCGGGACATCC 1883
consensus_13715#2 ATAGCCGCGACGGCAATGTGTATGATCATTTCACAATCTCACGCGATTACCGGGACATCC 1861
consensus_13715#1 TGGCTTGTTCAATTGACAACTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACAGTT 1890
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 TGGCCTGCTCAGTTGACAATTGTCCTCGGACCACACTGGCTACCTAAGGCATGAACGGCT 1943
consensus_13715#2 TGGCCTGCTCAGTTGACAATTGTCCTCGGACCACACTGGCTACCTAAAGCATGAACGGCT 1921
consensus_13715#1 CTAGACAGGTTTACAGGTAGATTGATT-GACAGGGCCTCAAAGAGCAATCTAGTTCCTGT 1949
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 CTAGATGGGTGAGAATTGAGATTGGTTTGATGTGGCCTCTTAGAGAACTGTAGTTGCTGC 2003
consensus_13715#2 CTAGATGGGTGAGAATTGAGATTGGTTTGATGTGGCCTCTTAGAGAACTGTAGTTGCTGC 1981
consensus_13715#1 ACA--AAGTCTTTTGGGACTATTCCAATAAATCATAATAAACACGGAATTTTCTTGACTG 2007
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 ACATTAGTTCTTTTTGGGACTGTACCAATAAATCTAATAAGCACAGAATTTTCTTGGCTG 2063
consensus_13715#2 ACATTAGTTCTTTTTGGGACTGTACCAATAAATCTAATAAGCACAGAATTTTCTTGGCTG 2041
consensus_13715#1 CGTACTTGGTTTTGTTGTACCAGTAGATGAAGTTCTGAATGTAATTTGCTCTTACTTAAT 2067
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 TGTATTTTGTTTTGTTGTAGCAGTAGATGAAATTCTGAATGGTTTTTGCTCTAACCTGGA 2123
consensus_13715#2 TGTATTTTGTTTTGTTGTAGCAGTAGATGAAATTCTGAATGGTTTTTGCTCTAACCTGGA 2101
consensus_13715#1 GATAAATAGGTTCAGCATGGCAGCCAATTCCAACAAAAAAAAAAAAAAAAAATCGAGGAG 2127
consensus_13715#3 ------------------------------------------------------------
consensus_13715#0 CACCTGATGATGAATAGGTTCAGAATGTCAGCCAGTTGCAGTGATTTACAAAAGTTCAGG 2183
consensus_13715#2 CACCTGATGATGAATAGGT----------------------------------------- 2120
consensus_13715#1 A---------------------------------- 2128
consensus_13715#3 -----------------------------------
consensus_13715#0 GCTTGGCTGAGTAAAACTGAGATAAGGAAACGAGT 2218
consensus_13715#2 -----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||