cluster # 13722

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Oryza sativa
cluster # 13722 cluster # 13722 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13722#0 length = 1350 sequences # 8
consensus_13722#1 length = 1072 sequences # 2

consensus_13722#2 length = 673 sequences # 2
consensus_13722#3 length = 275 sequences # 1

consensusID : consensus_13722#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1350
fasta sequence

                              [TCCCGGTCTACCCCGACGCCGCGGCGCGGCTGCTTCCTCTCATCGATTCCGCCTCAGATCGGGGAGGAATCGCGGCGAGATCGGCCGCTCCGAATCCGATCCGCGCACGTGGTCTCGCCGGCGGGGTCAGGTTGGTTCGCGGGAGCCGCCGCCGCCGCCGCCGACGACGACGATTGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGCAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA-GGGAGTGGATTCTAATTACTGCGATAAG-CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG-CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCATGTCATCGTGCATACATATGTTCATGTATATGTAATCATATGTCCTGGTTTATTATTAGCATTGGTCTG]

[+] EMBL AK121137             [TCCCGGTCTACCCCGACGCCGCGGCGCGGCTGCTTCCTCTCATCGATTCCGCCTCAGATCGGGGAGGAATCGCGGCGAGATCGGCCGCTCCGAATCCGATCCGCGCACGTGGTCTCGCCGGCGGGGTCAGGTTGGTTCGCGGGAGCCGCCGCCGCCGCCGCCGACGACGACGATTGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGCAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCATGTCATCGTGCATACATATGTTCATGTATATGTAATCATATGTCCTGGTTTATTATTAGCATTGGTCTG]
[+] EMBL CF325921             [                            GCTGCTTCCTCTCATCGATTCCGCCTCAGATCGGGGAGGAATCGCGGCGAGATCGGCCGCTCCGAATCCGATCCGCGCACGTGGTCTCGCCGGCGGGGTCAGGTTGGTTCGCGGGAGCCGCCGCCGCCGCCGCCGACGACGACGA TGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK062041             [                                                                                                                                                                                                                                                    CTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAA   AGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGTTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATT                                                                                         ]
[+] EMBL AU056949             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGCAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCAGGGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTANATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATT                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB668474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAA   AGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGGTCATAAACTGCATGTTTCGCCAGCTAAAAAAA                                                                                              ]
[+] EMBL CB675205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGCGATAAG CAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAG CAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCT                                                                                ]
[+] EMBL BI810035             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAGGGACTGAGGGAA C ATTAAGAGTGGGGATATTAAA CTGTCAAGAAACTTCTCAGCCA GGGAGTGGATTCTAATTACTGTGATAAGCCAAGGATTTACTTTGCTACATTT GCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGA CAAATATTCAGAG CCAAAATGGACAAGGGGAAACTCCTTGGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGA GGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTGC AAATGTCAAAAC ACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAAaaaaaaaa                                                                     ]
[+] EMBL BI795169             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GATTCTAATTACTGTGATAAG CAAGGATTTACTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTCAGAGCCATAAATGGACAAGGGGAAACTCCTTGGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCATGTCATCGTGCATACATATGTTCATGTATATGTAATCATATGTCCTGGTTTAaaaa             ]




>consensus_13722#0
TCCCGGTCTACCCCGACGCCGCGGCGCGGCTGCTTCCTCTCATCGATTCCGCCTCAGATC
GGGGAGGAATCGCGGCGAGATCGGCCGCTCCGAATCCGATCCGCGCACGTGGTCTCGCCG
GCGGGGTCAGGTTGGTTCGCGGGAGCCGCCGCCGCCGCCGCCGACGACGACGATTGGCCA
TGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCA
CCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACT
CGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATG
ATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTG
TATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCAC
CTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGC
CTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGCAGAGTATCAGCA
CAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAAT
CTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCT
TAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTA
CTGGGGAGGGACTGAGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTC
TCAGCCAGGGAGTGGATTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTACATTTGG
CTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATATTC
AGAGCAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACA
AGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTC
CTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTT
TACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCT
ACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAAT
TCATTGTGCTTAATCTTGCCATGTCATCGTGCATACATATGTTCATGTATATGTAATCAT
ATGTCCTGGTTTATTATTAGCATTGGTCTG

consensusID : consensus_13722#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1072
fasta sequence

                              [TCGGCCCCGACGACGGACAGGCCGCTGTGGTTCCCCGGCGCGGTGGCGCCGGACTACCTGGACGGGTCGCTCGTCGGCGACTACGGCTTCGACCCGTTCGGCCTCGGGAAGCCGACGACGACGATGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGTATGGAAGC-ATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCAGGGAGTGGATTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGNTAATGGAGCAAATATTCAGNGCAAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGCTGCGCCAGAGGATTGGGAGGACCTTNCGGGCATTCACAACGGNCCCTTGGTGACTAATTTTTCCTCCCTCTTTGTTCAANGGTTNCCNAAANNTGGTTTCC]

[+] EMBL CB668473             [TCGGCCCCGACGACGGACAGGCCGCTGTGGTTCCCCGGCGCGGTGGCGCCGGACTACCTGGACGGGTCGCTCGTCGGCGACTACGGCTTCGACCCGTTCGGCCTCGGGAAGCCGACGACGACGATGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGAGTATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGTATGGAAGC ATTAAG                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL D43190               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTG AGGGAAGCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCAGGGAGTGGATTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGNTAATGGAGCAAATATTCAGNGCAAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGCTGCGCCAGAGGATTGGGAGGACCTTNCGGGCATTCACAACGGNCCCTTGGTGACTAATTTTTCCTCCCTCTTTGTTCAANGGTTNCCNAAANNTGGTTTCC]




>consensus_13722#1
TCGGCCCCGACGACGGACAGGCCGCTGTGGTTCCCCGGCGCGGTGGCGCCGGACTACCTG
GACGGGTCGCTCGTCGGCGACTACGGCTTCGACCCGTTCGGCCTCGGGAAGCCGACGACG
ACGATGGCCATGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGC
TGCACCTTCACCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGC
CACGAGCACTCGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGA
GTCTGCTATGATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCA
CCTGGGAGTGTATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGAT
GCTTCATCACCTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAA
TGTGGAATGCCTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGAGT
ATCAGCACAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAAT
CAACAATCTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGC
TCATTCTTAAATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATAT
GATGTTACTGGGGAGGGACTGTATGGAAGCATTAAGAGTGGGGATATTAAAGCTGTCAAG
AAACTTCTCAGCCAGGGAGTGGATTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTA
CATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGNTAATGGAGCA
AATATTCAGNGCAAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCT
GCAATACAAGCTGCGCCAGAGGATTGGGAGGACCTTNCGGGCATTCACAACGGNCCCTTG
GTGACTAATTTTTCCTCCCTCTTTGTTCAANGGTTNCCNAAANNTGGTTTCC

consensusID : consensus_13722#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 673
fasta sequence

                              [CAATCTGCTGAATCAGTGTTCAAGAAGGCTTCGGCCACTTNAAGCGCAACTCAAGCTCTTCTTAATCTTGGCCTGATGNGCAATGATCCTATGATAAGGGTCCTTCTGAANATGATGTTACTGGGGAGGGACTGAGGGAAGCCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTNTCAGCCCAGGGAGTGGATTCTAATTACTGCGNTAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGNGCAAATATTCAGNGCAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU056950             [CAATCTGCTGAATCAGTGTTCAAGAAGGCTTCGGCCACTTNAAGCGCAACTCAAGCTCTTCTTAATCTTGGCCTGATGNGCAATGATCCTATGATAAGGGTCCTTCTGAANATGATGTTACTGGGGAGGGACTGAGGGAAGCCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTNTCAGCCCAGGGAGTGGATTCTAATTACTGCGNTAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGNGCAAATATTCAGNGCAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGTGCTTAATCTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA765210             [                                                                                                                                                                                                                                                                                                                                          tgGGATTGTGCTCCAGCCATGCTGCAATACAAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTA      TTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATT                                                                       ]




>consensus_13722#2
CAATCTGCTGAATCAGTGTTCAAGAAGGCTTCGGCCACTTNAAGCGCAACTCAAGCTCTT
CTTAATCTTGGCCTGATGNGCAATGATCCTATGATAAGGGTCCTTCTGAANATGATGTTA
CTGGGGAGGGACTGAGGGAAGCCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTT
NTCAGCCCAGGGAGTGGATTCTAATTACTGCGNTAAGCAAGGATTTGCTTTGCTACATTT
GGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGNGCAAATAT
TCAGNGCAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATAC
AAGATGCGCCAGAGGATGGAAGAACTTGCGGCATCACAACGACCCTAGTGATATTTTTCT
CCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTT
TTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCC
TACAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAA
TTCATTGTGCTTAATCTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA

consensusID : consensus_13722#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 275
fasta sequence

                              [CCGCCCACGCGTCCGGGAAGAACTTGCGGCATCTACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGNGCTTAATCTTGCCATGTCAAAAAAAAAA]

[+] EMBL BM419680             [CCGCCCACGCGTCCGGGAAGAACTTGCGGCATCTACAACGACCCTAGTGATATTTTTCTCCTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTTTACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAATTCATTGNGCTTAATCTTGCCATGTCAAAAAAAAAA]




>consensus_13722#3
CCGCCCACGCGTCCGGGAAGAACTTGCGGCATCTACAACGACCCTAGTGATATTTTTCTC
CTCTTGTTCATGTGCCAAAGATGGTGCCCCCCCTTGCATGGCCCAGAATAAAACCATTTT
TACCAACCGAGGGGCCTCTTTGCTGTGGGTATAGTAGTATTTCTGTTGGCACCATCGCCT
GCAAAATGTCAAAACAACACCAGCTCATAAACTGCATGTTTCGCCAGCTAAAAAAATAAT
TCATTGNGCTTAATCTTGCCATGTCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      TCCCGGTCTACCCCGACGCCGCGGCGCGGCTGCTTCCTCTCATCGATTCCGCCTCAGATC 60
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      GGGGAGGAATCGCGGCGAGATCGGCCGCTCCGAATCCGATCCGCGCACGTGGTCTCGCCG 120
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      GCGGGGTCAGGTTGGTTCGCGGGAGCCGCCGCCGCCGCCGCCGACGACGACGATTGGCCA 180
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      TGGAGACGCCGCCGCCGTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCA 240
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      CCACCTTCCGCCGCCGCCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACT 300
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      CGTCGTACCATATGGCTCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATG 360
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      ATTGCTTCAACAAATCCTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTG 420
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      TATCTAGTGCAGCTGACTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCAC 480
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      CTATGAAAAATTCAGCGTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGC 540
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      CTTTGTGTATATGCGAGGCTCCGAAACCAGAACCTGTGCCTGTAAAGCAGAGTATCAGCA 600
consensus_13722#1      ------------------------------------------------------------
                                                                                   

consensus_13722#2      --------------------------------------------------------CAAT 4
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      CAACTTCCTCAAGTGCACAGTCGAATCCTAGGCCAAAAAAATCTTCTACCAATCAACAAT 660
consensus_13722#1      ----------------------------------TCGGCCCCGACGACGGACAGGCCGCT 26
                                                                                   

consensus_13722#2      CTGCTGAATCAGTGTTCAAGAAGGCTTCGGCCACTTNAAGC-GCAACTCAAGCTCTTCTT 63
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      CTGCTGAATCAAGTGTCAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCT 720
consensus_13722#1      GTGGTTCCCCGGCGCGGTGGCGCCGGACTACCTGGACGGGTCGCTCGTCGGCGACTACGG 86
                                                                                   

consensus_13722#2      ---AATCTTGGCCTGATGNGCAATGATCCTA-TGATAAGGGTCCTTCTGAANATGATGTT 119
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      TA-AATCTTGGCCTGATGAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTT 779
consensus_13722#1      CTTCGACCCGTTCGGCCTCGGGAAGCCGACGACGACGATGGCCATGGAGACGCCGCCGCC 146
                                                                                   

consensus_13722#2      ACTGGGGAGGGACTGAGGGAAGCCAATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACT 179
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      ACTGGGGAGGGACTGAGGGAAGC-AATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACT 838
consensus_13722#1      GTTCCAGGAGTCCGCCCACTGCGACGTCTGCCGCTGCACCTTCACCACCTTCCGCCGCCG 206
                                                                                   

consensus_13722#2      TNTCAGCCCAGGGAGTGGATTCTAATTACTGCGNTAAGCAAGGATTTGCTTTGCTACATT 239
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      TCTCAGCC-AGGGAGTGGATTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTACATT 897
consensus_13722#1      CCATCACTGCCGCAACTGCGGGAGGACGCTCTGCCACGAGCACTCGTCGTACCATATGGC 266
                                                                                   

consensus_13722#2      TGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGNGCAAATA 299
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      TGGCTGCACTATTTAACCAGACAGAGATTGCTCTTATTCTCATGGATAATGGAGCAAATA 957
consensus_13722#1      TCTCCCACAGTACGGGATATACACGGACGTCAGAGTCTGCTATGATTGCTTCAACAAATC 326
                                                                                   

consensus_13722#2      TTCAGNGCAAAA-TGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAAT 358
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      TTCAGAGCAAAAATGGACAAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAAT 1017
consensus_13722#1      CTCCAGTCGTGGTGGTGTTGGCAATGCCGGTTCACCTGGGAGTGTATCTAGTGCAGCTGA 386
                                                                                   

consensus_13722#2      ACAAGATGC--GCCAGAGGAT---GGAAGAACTTGCGGCATC----ACAACGACCCTAGT 409
consensus_13722#3      -------CC--GCCCACGCGTCCGGGAAGAACTTGCGGCATCT---ACAACGACCCTAGT 48
consensus_13722#0      ACAAGATGC--GCCAGAGGAT---GGAAGAACTTGCGGCATC----ACAACGACCCTAGT 1068
consensus_13722#1      CTCCTTTTCAGGGTTAAACTTGGGGGAAGATGATGCTTCATCACCTATGAAAAATTCAGC 446
                               *  *        *   ******   ***  ****    *  *  *    ** 

consensus_13722#2      GAT--ATTTTTCTCCTCTTGTTCATGTGC-CAAAGATGGTGCCCCCCCTTGCATGGCCCA 466
consensus_13722#3      GAT--ATTTTTCTCCTCTTGTTCATGTGC-CAAAGATGGTGCCCCCCCTTGCATGGCCCA 105
consensus_13722#0      GAT--ATTTTTCTCCTCTTGTTCATGTGC-CAAAGATGGTGCCCCCCCTTGCATGGCCCA 1125
consensus_13722#1      GTTTCACAGTGCACCTGCTGTTATTGAGTGCAAATGTGGAATGCCTTTGTGTATATGCGA 506
                       * *  *   * * ***  ****  ** *  ****  ***    **    ** **   * *

consensus_13722#2      GAAT--AAAACCA---TTTTTACCAACCGAGGG-------GCCTCTTTGCTGTGGGTATA 514
consensus_13722#3      GAAT--AAAACCA---TTTTTACCAACCGAGGG-------GCCTCTTTGCTGTGGGTATA 153
consensus_13722#0      GAAT--AAAACCA---TTTTTACCAACCGAGGG-------GCCTCTTTGCTGTGGGTATA 1173
consensus_13722#1      GGCTCCGAAACCAGAACCTGTGCCTGTAAAGAGTATCAGCACAACTTCCTCAAGTGCACA 566
                       *  *   ******     * * **     ** *        *  ***      * * * *

consensus_13722#2      GTAGTATTTCTG-TTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAAC 573
consensus_13722#3      GTAGTATTTCTG-TTGGCACCATCGCCTGCAAAATGTCAAAACAACACCAGCTCATAAAC 212
consensus_13722#0      GTAGTATTTCTG-TTGGCACCATCGCCTACAAAATGTCAAAACAACACCAGCTCATAAAC 1232
consensus_13722#1      GTCGAATCCTAGGCCAAAAAAATCTTCTACCAA---TCAACAATCTGCTGAATCAAGTGT 623
                       ** * **    *      *  ***  ** * **   **** *     *    ***     

consensus_13722#2      T--GCATGTTTCG-CCAGCTAAAAAAATAATTCA---TTGTGCTTAA-TCTTGCCAAAAA 626
consensus_13722#3      T--GCATGTTTCG-CCAGCTAAAAAAATAATTCA---TTGNGCTTAA-TCTTGCCATGTC 265
consensus_13722#0      T--GCATGTTTCG-CCAGCTAAAAAAATAATTCA---TTGTGCTTAA-TCTTGCCATGTC 1285
consensus_13722#1      CAAGAAGGCTTCGGCCACTTCAAGCAGCAACTCAAGCTCATTCTTAAATCTTGGCCTGAT 683
                          * * * **** ***  * **  *  ** ***   *    ***** ***** *     

consensus_13722#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------- 673
consensus_13722#3      AAAAAAAAAA-------------------------------------------------- 275
consensus_13722#0      ATCGTGCATACATATGTTCATGTATATGTAATCATATGTCCTGGTTTATTATTAGCATTG 1345
consensus_13722#1      GAGCAATGATACTAATGATAAGGGTCCTTCTGAATATGATGTTACTGGGGAGGGACTGTA 743
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      GTCTG------------------------------------------------------- 1350
consensus_13722#1      TGGAAGCATTAAGAGTGGGGATATTAAAGCTGTCAAGAAACTTCTCAGCCAGGGAGTGGA 803
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      ------------------------------------------------------------
consensus_13722#1      TTCTAATTACTGCGATAAGCAAGGATTTGCTTTGCTACATTTGGCTGCACTATTTAACCA 863
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      ------------------------------------------------------------
consensus_13722#1      GACAGAGATTGCTCTTATTCTCATGGNTAATGGAGCAAATATTCAGNGCAAAAAATGGAC 923
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      ------------------------------------------------------------
consensus_13722#1      AAGGGGAAACTCCTTTGGATTGTGCTCCAGCCATGCTGCAATACAAGCTGCGCCAGAGGA 983
                                                                                   

consensus_13722#2      ------------------------------------------------------------
consensus_13722#3      ------------------------------------------------------------
consensus_13722#0      ------------------------------------------------------------
consensus_13722#1      TTGGGAGGACCTTNCGGGCATTCACAACGGNCCCTTGGTGACTAATTTTTCCTCCCTCTT 1043
                                                                                   

consensus_13722#2      -----------------------------
consensus_13722#3      -----------------------------
consensus_13722#0      -----------------------------
consensus_13722#1      TGTTCAANGGTTNCCNAAANNTGGTTTCC 1072