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Oryza sativa
cluster # 13727 cluster # 13727       Sequences # 14       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13727#0 length = 2272 sequences # 12  
 consensus_13727#1 length = 573 sequences # 1  
consensus_13727#2 length = 281 sequences # 1  
consensusID : consensus_13727#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2272
fasta sequence 
                              [GAGTCGTCAGCCCTCTCCTCCAAGCTAACCACATCCCGATGCCGCCCAAATCGAAGGCGGCGGCGGCGGCGGCCGCCGCCGCGGCGGCGCAGCCGGTCGCCGTGGAGGACCTCTTCACCACGCTGCACCGCCACATCGAGGCCGGCGAGTTCCCGCAGGCCGTCAAGGTCGCCGACCAAGTTCTCGCGGCGGCGCCGGGCGACGAGGATGCGGTGCGGTGCAAGGTGGTGGCGCACATCAAGTCCGATGCGATTGAGAAGGCGCTCGCCGCGATCCGCGCCGCCGAGCGCCTCCCGATCGACCTCAGCTACTGCAAGGCCTATTGCTACTACAGGCAAAATAAACTGCAAGAAGCTCTAGACCTATTGAAAGGTCAAGAAGAAACCTCTGCTATTCTTCAGTTGGAATCTCAGATTTATTATAGGCTAGGTAGAATGAATGATTGCATGAATAGCTATGAGAAGCTTCAGAAATTTAAGGTTGAGTCAATGGATCTGAAGATAAATATCATTGCTGCTCTGGTTGCTGCTGGAAGGGCCTCTGAAGTTCAGGCAACCATGAAGGCACAAAAAGTTGATCTCTCCTCGAGGGCACTCAGAGATACTCGAAGCTTTGAGCTTGCATATAATTCTGCCTGCTCGTTGATAGAAAATAAAAAGTATTCAGAAGCTAAAGAGCAGCTGGACTTGGCAAAAAGAATTGGGAAAGAAGAGCTTATGGTGGACGAATATGGAGATGATGATATTGAATATGAACTAGCTCCTGTGTCTGCTCAGCTTGCTTATGTGCATCAGCTACAAGGACAAACCCAGGAAGCTATGGAAACCTATAATAATATAACAAGCAGGAATTTGGCAGATCCCTCATCACTTGCTGTGGCAACAACGAACCTTATCTCGTTGAAAGGAACCAGGGACGCTGCTGATAGCTTGAGGAAGCTTAGCCGGCTTATTGAAAAATCTACTGCTCCCAACCAGTTGCAACTTATCGAAAGCCTTGAATCCAAGCTATCACCAAGGCAAAAAGAAGCTCTGTATTCTGCATATGTTCTTTTACTCCTCCACGCGAACAAAATTGATCAGGCACATGAGTTTGTCAGTGGACTACTTGGTATGTTTCAGGACAGCACATTCCCTGTTTTGCTTCAAGCTGCAGTTCATGTGAGAGAAAAGAAGGTGCAGAAAGCTGAAGAAGTTCTTAGCCAGTATGCTGAGAAGCATCCTGAGAATTCTAAAGGAGTCCTCCTTTCGCTTGCTCAGATCGCTGCCAG-T-GCCAATCATTTTCAGATTGCTGCTGATTCATTGTCTAAAATAGTTGACATCCAGCACATGCCTGCTACAGTCGCTACACTAGTAGCTCTTAAAGAGCGCCTTGGTGACTCTAATGGTGCTTCTTCTGTGCTTGATTCTGCTATCCAGTGGTGGAAGAATTCCATGACTGAGGATAACAAATTAGAGGTGTTCATGCGGGAGGCTGCTACATTTAAGCTCAACCATGGGCGTGACGAAGA-GGCCTGCCAATTGTATGAGGATCTTG-TTAAGAGCTTTGGAAGCGCAGAAGCGTTGGC-GGGGCTAGTAGCAACTTCAGCGCGCACCAACCTTGAGAAAGCTGAACAGTATGAGAAGAAACTGAAACCATTGCCAGGTCTCAAGGGAATTAATGTTGAGAGCCTGGAGAAAACTTCTGGTGCAAGGCCTTTTGAGGCGCCCAAACCCATGGAACAGGACGTTACTGACGAAGTGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATCCAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAAGTTACCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCAAAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAG-AAAAAATCGAGAT----GACGACGAATCCAAACTATCACAGTTCACAAAATCAAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTGAAGTTCCGCCCTTTACATGTTAAAAAAAAAA]

[+] EMBL AK103621             [GAGTCGTCAGCCCTCTCCTCCAAGCTAACCACATCCCGATGCCGCCCAAATCGAAGGCGGCGGCGGCGGCGGCCGCCGCCGCGGCGGCGCAGCCGGTCGCCGTGGAGGACCTCTTCACCACGCTGCACCGCCACATCGAGGCCGGCGAGTTCCCGCAGGCCGTCAAGGTCGCCGACCAAGTTCTCGCGGCGGCGCCGGGCGACGAGGATGCGGTGCGGTGCAAGGTGGTGGCGCACATCAAGTCCGATGCGATTGAGAAGGCGCTCGCCGCGATCCGCGCCGCCGAGCGCCTCCCGATCGACCTCAGCTACTGCAAGGCCTATTGCTACTACAGGCAAAATAAACTGCAAGAAGCTCTAGACCTATTGAAAGGTCAAGAAGAAACCTCTGCTATTCTTCAGTTGGAATCTCAGATTTATTATAGGCTAGGTAGAATGAATGATTGCATGAATAGCTATGAGAAGCTTCAGAAATTTAAGGTTGAGTCAATGGATCTGAAGATAAATATCATTGCTGCTCTGGTTGCTGCTGGAAGGGCCTCTGAAGTTCAGGCAACCATGAAGGCACAAAAAGTTGATCTCTCCTCGAGGGCACTCAGAGATACTCGAAGCTTTGAGCTTGCATATAATTCTGCCTGCTCGTTGATAGAAAATAAAAAGTATTCAGAAGCTAAAGAGCAGCTGGACTTGGCAAAAAGAATTGGGAAAGAAGAGCTTATGGTGGACGAATATGGAGATGATGATATTGAATATGAACTAGCTCCTGTGTCTGCTCAGCTTGCTTATGTGCATCAGCTACAAGGACAAACCCAGGAAGCTATGGAAACCTATAATAATATAACAAGCAGGAATTTGGCAGATCCCTCATCACTTGCTGTGGCAACAACGAACCTTATCTCGTTGAAAGGAACCAGGGACGCTGCTGATAGCTTGAGGAAGCTTAGCCGGCTTATTGAAAAATCTACTGCTCCCAACCAGTTGCAACTTATCGAAAGCCTTGAATCCAAGCTATCACCAAGGCAAAAAGAAGCTCTGTATTCTGCATATGTTCTTTTACTCCTCCACGCGAACAAAATTGATCAGGCACATGAGTTTGTCAGTGGACTACTTGGTATGTTTCAGGACAGCACATTCCCTGTTTTGCTTCAAGCTGCAGTTCATGTGAGAGAAAAGAAGGTGCAGAAAGCTGAAGAAGTTCTTAGCCAGTATGCTGAGAAGCATCCTGAGAATTCTAAAGGAGTCCTCCTTTCGCTTGCTCAGATCGCTGCCAG T GCCAATCATTTTCAGATTGCTGCTGATTCATTGTCTAAAATAGTTGACATCCAGCACATGCCTGCTACAGTCGCTACACTAGTAGCTCTTAAAGAGCGCCTTGGTGACTCTAATGGTGCTTCTTCTGTGCTTGATTCTGCTATCCAGTGGTGGAAGAATTCCATGACTGAGGATAACAAATTAGAGGTGTTCATGCGGGAGGCTGCTACATTTAAGCTCAACCATGGGCGTGACGAAGA GGCCTGCCAATTGTATGAGGATCTTG TTAAGAGCTTTGGAAGCGCAGAAGCGTTGGC GGGGCTAGTAGCAACTTCAGCGCGCACCAACCTTGAGAAAGCTGAACAGTATGAGAAGAAACTGAAACCATTGCAAGGTCTCAAGGGAATTAATGTTGAGAGCCTGGAGAAAACTTCTGGTGCAAGGCCTTTTGAGGCGCCCAAACCCATGGAACAGGACGTTACTGACGAAGTGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATCCAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAAGTTACCGCCCAAAGAGGAAGGATAAGAGGACTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCAAAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAG AAAAAATCGAGAT    GACGACGAATCCAAACTATCACAGTTCACAAAATCAAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTGAAGTTCCGC                      ]
[+] EMBL CB967129             [                                                              ataagcttGGGCG CG CGCGGCGGCGCAG CGGTCGCCG GGAGGA CTCTTCACCACGCTGCACCGCCACATCGAGGCCGGCGAGTTCCCGCAGGCCGTCAAGGTCGCTGACCAAGTTCTCGCGGCGGCGCCGGGCGACGAGGATGCGGTGCGGTGCAAGGTGGTGGCGCACATCAAGTCCGATGCGATTGAGAAGGCGCTCGCCGCGATCCGCGCCGCCGAGCGCCTCCCGATCGACCTCAGCTACTGCAAGGCCTATTGCTACTACAGGCAAAATAAACTGCAAGAAGCTCTAGACCTATTGAAAGGTCAAGAAGAAACCTCTGCTATTCTTCAGTTGGAATCTCAGATTTATTATAGGCTAGGTAGAATGAATGATTGCATGAATAGCTATGAGAAGCTTCAGAAATTTAAGGTTGAGTCAATGGATCTGAAGATAAATATCATTGCTGCTCTGGTTGCTGCTGGAAGGGCCTCTGAAGTTCAGGCAACCATGAAGGCGCAAAAAGTTGATCTCTCCTCGAGGGCACTCAGAGATACTCGAAGCTTTGAGCTTGCATATAATTCTGCCTGCTCGTTGATAGAAAATAAAAAGTATTCAGAAGCTAAAGAGCAGCTGGACTTGGCACAAAGAATTGGGAAAGAAGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB640885             [                                                                                             CGGTCGCCGTGGAGGACCTCTTCACCACGCTGCACCGCCACATCGAGGCCGGCGAGTTCCCGCAGGCCGTCAAGGTCGCCGACCAAGTTCTCGCGGCGGCGCCGGGCGACGAGGATGCGGTGCGGTGCAAGGTGGTGGCGCACATCAAGTCCGATGCGATTGAGAAAGCGCTTGCCGCNATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU030826             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACGCTGCTGATAGCTTGAGGAAGCTTAGCCGGCTTATTGAAAAATCTACTGCTCCCAACCAGTTGCAACTTATCGAAAGCCTTGAATCCAAGCTATCACCAAGGCAAAAAGAAGCTCTGTATTCTGCATATGTTCTTTTACNCCTCCACGCGAACAAAATTGATCAGGCACATGAGTTTGTCAGTGGACTACTTGGTATGTTTCAGGACAGCACATTCCCTGTTTTGCTTCAAGCTGCAGTTCATGTGAGAGAAAAGAAGGTGCAGAAAGCTGAAGAAGTTCTTAGCCAGTATGCTGAGAAGCATCCTGAGAATTCTAAAGGAGTCCTCCTTTCGCTTGCTCAGATCGCTGCCAG TGGCCAATCATTTTCAGATTGCTGCTGA TCATGGCCT AAATAG TGACATCCAGCACA GGCTGCNA AGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA765758             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGTTTGTNAGTGGACTACTTGGTATGTTT AGGACAGCACATTCCCTGTTTTGCTTCAAGCTGCAGTTCATGTGAGAGAAAAGAAGGTGCAGAAAGCTGAAGAAGTTCTTAGCCAGTATGCTGAGAAGCATCCTGAGAATTCTAAAGGAGTCCTCCTTTCGCTTGCTCAGATCGCTGCCAG T GCCAATCATTTTCAGATTGCTGCTGATTCATTGTCTAAAATAGTTGACATCCAGCACATGCCTGCTACAGTCGCTACACTAGTAGCTCTTAAAGAGCGCCTTGGTGACTCTAATGGTGCTTCTTCTGTGCTTGATTCTGCTATCCAGTGGTGGAAGAATTCCATGACTGAGGATAACAAATTAGAGGTGTTCATGCGGGAGGCTGCTACATTTAAGCTCAACCATGGGCGTGACGAAGA GGCCTGCCAATTGTATGAGGATCTTG TTAAGAGCTTTGGAAGCGCAGAAGCGTTGGC GGGGCTAGTAGCAACTTCAGCGCGCACCAACCTTGAGAAAGCTGAACAGTATGAGAAGAAACTGAAACCATTGCCAGGTCTCAAGGGAATTAATGNTGAGAGCCTGGAGAAAACTTCTGGTGCAAGGCCTTTTGAGGCGCCCAAACCCATGGNACAGGACGNTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C26139               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTGCAGAAAGCTGAAGAAGTTCTTAGCCAGTATGCTGAGAAGCATCCTGAGAATTCTAAAGGAGTCCTCCTTTCGNTTGCTCAGATCGCTGCCAGNT CCCAATCATTTTCAGATTGCTGCTGATTCATTGTCTAAAATAGTTGACATCCAGCACATGCCTGCTACAGTCGCTACACTAGTAGCTCTTAAAGAGCGCCTTGGTGACTCTAATGGTGCTTCTTCTGTGCTTGATTCTGCTATCCAGTGGTGGAAGAATTCCATGACTGAGGATAACAAATTAGAGGTGTTCATGCGGGAGGCTGCTACATTTAAGCTCAACCATGGGCGTGACGAAGAGGGCCTGCCAATTGTATGAGGATCTTGTTTAAGAGCTTTGGAAGCGCAGAAGCGTTTGCGGGGGCTAGTAGCAACTTCAGCGCGCACCAACCTTGAGAAAGCTGAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU100666             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCCCAGAAGCGTTGGC GGGNCTAGTAGCAACTTCAGCGCGCACCAACCTTGNGAAAGCTGAACAGTATGAGAAGAAACTGAAACCATTGCCAGGTCTCAAGGGAATTAATGTTGAGAGCCTGGAGAAAACTTCTGGTGCAAGGCCTTTTGAGGCGCCCAAACCCATGGAACAGGACGTTACTGACGAAGTGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATCCAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAAGTTACCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCAAAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAG AAAAAATCGAGAT    GACGACGAATCCAAACTATCACAGTTCACAAAATCAAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTGAAaaaa                         ]
[+] EMBL CA998291             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGCCCAAACCCATGGAACAGGACGTTACTGACGAAGTGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATCCAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAAGTTACCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCAAAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAG AAAAAATCGAGAT    GACGACGAATCCAAACTATCACAGTTCACAAAATCAAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTGAAGTTCaaaa                     ]
[+] EMBL CA998881             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGCCCAAACCCATGGAACAGGACGTTACTGACGAAGTGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATCCAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAAGTTACCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCAAAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAG AAAAAATCGAGAT    GACGACGAATCCAAACTATCACAGTTCACAAAATCAAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTG                                   ]
[-] EMBL CA763093             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  acaaggggGGAACAGGACGTTACTGACGAAGTGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATCCAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAAGTTTCCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCAAAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACGAGTCCCGGAAG AAAAAATCGAGATCTTAGACGACGAATCCAAATTATCACAGTTCACAAAATCTAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTGAAGTTCCGCCCTTTACATGTTAAAAAAAAAA]
[+] EMBL CA766243             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACGGGTTCCAACAAGTCCCGGAAGAAAAAAATCGAGATCTTAGACGACGAATCCAAATTATCACAGTTCACAAAATCTAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTGAAGTTCCGCCCTTTACATGTTAAAAAAAA  ]
[-] EMBL AU225821             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgctCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTGAAGTTCCGCCCTTTACAgcggc         ]




>consensus_13727#0
GAGTCGTCAGCCCTCTCCTCCAAGCTAACCACATCCCGATGCCGCCCAAATCGAAGGCGG
CGGCGGCGGCGGCCGCCGCCGCGGCGGCGCAGCCGGTCGCCGTGGAGGACCTCTTCACCA
CGCTGCACCGCCACATCGAGGCCGGCGAGTTCCCGCAGGCCGTCAAGGTCGCCGACCAAG
TTCTCGCGGCGGCGCCGGGCGACGAGGATGCGGTGCGGTGCAAGGTGGTGGCGCACATCA
AGTCCGATGCGATTGAGAAGGCGCTCGCCGCGATCCGCGCCGCCGAGCGCCTCCCGATCG
ACCTCAGCTACTGCAAGGCCTATTGCTACTACAGGCAAAATAAACTGCAAGAAGCTCTAG
ACCTATTGAAAGGTCAAGAAGAAACCTCTGCTATTCTTCAGTTGGAATCTCAGATTTATT
ATAGGCTAGGTAGAATGAATGATTGCATGAATAGCTATGAGAAGCTTCAGAAATTTAAGG
TTGAGTCAATGGATCTGAAGATAAATATCATTGCTGCTCTGGTTGCTGCTGGAAGGGCCT
CTGAAGTTCAGGCAACCATGAAGGCACAAAAAGTTGATCTCTCCTCGAGGGCACTCAGAG
ATACTCGAAGCTTTGAGCTTGCATATAATTCTGCCTGCTCGTTGATAGAAAATAAAAAGT
ATTCAGAAGCTAAAGAGCAGCTGGACTTGGCAAAAAGAATTGGGAAAGAAGAGCTTATGG
TGGACGAATATGGAGATGATGATATTGAATATGAACTAGCTCCTGTGTCTGCTCAGCTTG
CTTATGTGCATCAGCTACAAGGACAAACCCAGGAAGCTATGGAAACCTATAATAATATAA
CAAGCAGGAATTTGGCAGATCCCTCATCACTTGCTGTGGCAACAACGAACCTTATCTCGT
TGAAAGGAACCAGGGACGCTGCTGATAGCTTGAGGAAGCTTAGCCGGCTTATTGAAAAAT
CTACTGCTCCCAACCAGTTGCAACTTATCGAAAGCCTTGAATCCAAGCTATCACCAAGGC
AAAAAGAAGCTCTGTATTCTGCATATGTTCTTTTACTCCTCCACGCGAACAAAATTGATC
AGGCACATGAGTTTGTCAGTGGACTACTTGGTATGTTTCAGGACAGCACATTCCCTGTTT
TGCTTCAAGCTGCAGTTCATGTGAGAGAAAAGAAGGTGCAGAAAGCTGAAGAAGTTCTTA
GCCAGTATGCTGAGAAGCATCCTGAGAATTCTAAAGGAGTCCTCCTTTCGCTTGCTCAGA
TCGCTGCCAGTGCCAATCATTTTCAGATTGCTGCTGATTCATTGTCTAAAATAGTTGACA
TCCAGCACATGCCTGCTACAGTCGCTACACTAGTAGCTCTTAAAGAGCGCCTTGGTGACT
CTAATGGTGCTTCTTCTGTGCTTGATTCTGCTATCCAGTGGTGGAAGAATTCCATGACTG
AGGATAACAAATTAGAGGTGTTCATGCGGGAGGCTGCTACATTTAAGCTCAACCATGGGC
GTGACGAAGAGGCCTGCCAATTGTATGAGGATCTTGTTAAGAGCTTTGGAAGCGCAGAAG
CGTTGGCGGGGCTAGTAGCAACTTCAGCGCGCACCAACCTTGAGAAAGCTGAACAGTATG
AGAAGAAACTGAAACCATTGCCAGGTCTCAAGGGAATTAATGTTGAGAGCCTGGAGAAAA
CTTCTGGTGCAAGGCCTTTTGAGGCGCCCAAACCCATGGAACAGGACGTTACTGACGAAG
TGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATC
CAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAA
GTTACCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGT
CAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCA
AAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAGAAAAAAT
CGAGATGACGACGAATCCAAACTATCACAGTTCACAAAATCAAAGATACCCTAGACTCTG
TTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTC
ATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTT
AAACTGATGCAGATCTGATTGAAGTTCCGCCCTTTACATGTTAAAAAAAAAA

consensusID : consensus_13727#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 573
fasta sequence 
                              [GCCCAAACCCATGGAACAGGACGTTACTGACGAAGTGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATCCAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAAGTTACCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCAAAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAGAAAAAATCGAGATCTTAGACGACGAATCCAAATTATCACAGTTCACAAAATCTAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTGAAGTNCNNNCCTTTACATGNNNNNNNTGCGTTN]

[+] EMBL CF196046             [GCCCAAACCCATGGAACAGGACGTTACTGACGAAGTGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATCCAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAAGTTACCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCAAAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAGAAAAAATCGAGATCTTAGACGACGAATCCAAATTATCACAGTTCACAAAATCTAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTGAAGTNCNNNCCTTTACATGNNNNNNNTGCGTTN]




>consensus_13727#1
GCCCAAACCCATGGAACAGGACGTTACTGACGAAGTGAAGAAGCAGAAGGCTAAGAAGAG
GAAGAGGAAACCTAGATACCCGAAAGGCTTTGATCCAGCAAACCCAGGGCCACCACCAGA
TCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAAGTTACCGCCCAAAGAGGAAGGATAA
GAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGTCAAGAGATGGAACTTCATCTGCGAG
CGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCAAAGCTCCAGCTGCAGCCCCAGAACC
ACCAAAGGGTTCCAACAAGTCCCGGAAGAAAAAATCGAGATCTTAGACGACGAATCCAAA
TTATCACAGTTCACAAAATCTAAGATACCCTAGACTCTGTTCGTTTAGCGTTTTGACTCG
CAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTGTCATGCTTTTACAATCATATTTT
GCTGGCCACATCCGAGTCTGTACTGTTGCCAATTCTGTTAAACTGATGCAGATCTGATTG
AAGTNCNNNCCTTTACATGNNNNNNNTGCGTTN

consensusID : consensus_13727#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 281
fasta sequence 
                              [GCAANCCAAGCCCCCAAAGCTCCNGCTGCAGCCCCNGANCCCCCAANGGGTTCCAACAAGTCCCGGAAGAAAAAATCGNGATGNCGNCGAATCCAAACTNTCNCNGTTCNCNAAATCAAAGATNCCCTAGACTCTGTTCGTTTNGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTNTCATGCTTTTNCAATCATNTTTTGCTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU091435             [GCAANCCAAGCCCCCAAAGCTCCNGCTGCAGCCCCNGANCCCCCAANGGGTTCCAACAAGTCCCGGAAGAAAAAATCGNGATGNCGNCGAATCCAAACTNTCNCNGTTCNCNAAATCAAAGATNCCCTAGACTCTGTTCGTTTNGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATTTNTCATGCTTTTNCAATCATNTTTTGCTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13727#2
GCAANCCAAGCCCCCAAAGCTCCNGCTGCAGCCCCNGANCCCCCAANGGGTTCCAACAAG
TCCCGGAAGAAAAAATCGNGATGNCGNCGAATCCAAACTNTCNCNGTTCNCNAAATCAAA
GATNCCCTAGACTCTGTTCGTTTNGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTG
TGTTGCCGGATTTNTCATGCTTTTNCAATCATNTTTTGCTGGCCAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13727#0      GAGTCGTCAGCCCTCTCCTCCAAGCTAACCACATCCCGATGCCGCCCAAATCGAAGGCGG 60
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CGGCGGCGGCGGCCGCCGCCGCGGCGGCGCAGCCGGTCGCCGTGGAGGACCTCTTCACCA 120
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CGCTGCACCGCCACATCGAGGCCGGCGAGTTCCCGCAGGCCGTCAAGGTCGCCGACCAAG 180
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      TTCTCGCGGCGGCGCCGGGCGACGAGGATGCGGTGCGGTGCAAGGTGGTGGCGCACATCA 240
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      AGTCCGATGCGATTGAGAAGGCGCTCGCCGCGATCCGCGCCGCCGAGCGCCTCCCGATCG 300
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      ACCTCAGCTACTGCAAGGCCTATTGCTACTACAGGCAAAATAAACTGCAAGAAGCTCTAG 360
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      ACCTATTGAAAGGTCAAGAAGAAACCTCTGCTATTCTTCAGTTGGAATCTCAGATTTATT 420
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      ATAGGCTAGGTAGAATGAATGATTGCATGAATAGCTATGAGAAGCTTCAGAAATTTAAGG 480
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      TTGAGTCAATGGATCTGAAGATAAATATCATTGCTGCTCTGGTTGCTGCTGGAAGGGCCT 540
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CTGAAGTTCAGGCAACCATGAAGGCACAAAAAGTTGATCTCTCCTCGAGGGCACTCAGAG 600
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      ATACTCGAAGCTTTGAGCTTGCATATAATTCTGCCTGCTCGTTGATAGAAAATAAAAAGT 660
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      ATTCAGAAGCTAAAGAGCAGCTGGACTTGGCAAAAAGAATTGGGAAAGAAGAGCTTATGG 720
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      TGGACGAATATGGAGATGATGATATTGAATATGAACTAGCTCCTGTGTCTGCTCAGCTTG 780
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CTTATGTGCATCAGCTACAAGGACAAACCCAGGAAGCTATGGAAACCTATAATAATATAA 840
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CAAGCAGGAATTTGGCAGATCCCTCATCACTTGCTGTGGCAACAACGAACCTTATCTCGT 900
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      TGAAAGGAACCAGGGACGCTGCTGATAGCTTGAGGAAGCTTAGCCGGCTTATTGAAAAAT 960
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CTACTGCTCCCAACCAGTTGCAACTTATCGAAAGCCTTGAATCCAAGCTATCACCAAGGC 1020
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      AAAAAGAAGCTCTGTATTCTGCATATGTTCTTTTACTCCTCCACGCGAACAAAATTGATC 1080
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      AGGCACATGAGTTTGTCAGTGGACTACTTGGTATGTTTCAGGACAGCACATTCCCTGTTT 1140
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      TGCTTCAAGCTGCAGTTCATGTGAGAGAAAAGAAGGTGCAGAAAGCTGAAGAAGTTCTTA 1200
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      GCCAGTATGCTGAGAAGCATCCTGAGAATTCTAAAGGAGTCCTCCTTTCGCTTGCTCAGA 1260
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      TCGCTGCCAGTGCCAATCATTTTCAGATTGCTGCTGATTCATTGTCTAAAATAGTTGACA 1320
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      TCCAGCACATGCCTGCTACAGTCGCTACACTAGTAGCTCTTAAAGAGCGCCTTGGTGACT 1380
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CTAATGGTGCTTCTTCTGTGCTTGATTCTGCTATCCAGTGGTGGAAGAATTCCATGACTG 1440
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      AGGATAACAAATTAGAGGTGTTCATGCGGGAGGCTGCTACATTTAAGCTCAACCATGGGC 1500
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      GTGACGAAGAGGCCTGCCAATTGTATGAGGATCTTGTTAAGAGCTTTGGAAGCGCAGAAG 1560
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CGTTGGCGGGGCTAGTAGCAACTTCAGCGCGCACCAACCTTGAGAAAGCTGAACAGTATG 1620
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      AGAAGAAACTGAAACCATTGCCAGGTCTCAAGGGAATTAATGTTGAGAGCCTGGAGAAAA 1680
consensus_13727#1      ------------------------------------------------------------
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CTTCTGGTGCAAGGCCTTTTGAGGCGCCCAAACCCATGGAACAGGACGTTACTGACGAAG 1740
consensus_13727#1      -------------------------GCCCAAACCCATGGAACAGGACGTTACTGACGAAG 35
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      TGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATC 1800
consensus_13727#1      TGAAGAAGCAGAAGGCTAAGAAGAGGAAGAGGAAACCTAGATACCCGAAAGGCTTTGATC 95
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAA 1860
consensus_13727#1      CAGCAAACCCAGGGCCACCACCAGATCCGGAGAGATGGCTACCCAAGAGAGAGCGGTCAA 155
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      GTTACCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGT 1920
consensus_13727#1      GTTACCGCCCAAAGAGGAAGGATAAGAGGGCTCAGGTCAGAGGTGCTCAAGGAGCTGTGT 215
consensus_13727#2      ------------------------------------------------------------
                                                                                   

consensus_13727#0      CAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCA 1980
consensus_13727#1      CAAGAGATGGAACTTCATCTGCGAGCGCCAGTTCATCTTCGAAAGCAAACCAAGCCACCA 275
consensus_13727#2      --------------------------------------------GCAANCCAAGCCCCCA 16
                                                                   **** ******* ***

consensus_13727#0      AAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAGAAAAAAT 2040
consensus_13727#1      AAGCTCCAGCTGCAGCCCCAGAACCACCAAAGGGTTCCAACAAGTCCCGGAAGAAAAAAT 335
consensus_13727#2      AAGCTCCNGCTGCAGCCCCNGANCCCCCAANGGGTTCCAACAAGTCCCGGAAGAAAAAAT 76
                       ******* *********** ** ** **** *****************************

consensus_13727#0      CGAGAT----GACGACGAATCCAAACTATCACAGTTCACAAAATCAAAGATACCCTAGAC 2096
consensus_13727#1      CGAGATCTTAGACGACGAATCCAAATTATCACAGTTCACAAAATCTAAGATACCCTAGAC 395
consensus_13727#2      CGNGAT----GNCGNCGAATCCAAACTNTCNCNGTTCNCNAAATCAAAGATNCCCTAGAC 132
                       ** ***    * ** ********** * ** * **** * ***** ***** ********

consensus_13727#0      TCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATT 2156
consensus_13727#1      TCTGTTCGTTTAGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATT 455
consensus_13727#2      TCTGTTCGTTTNGCGTTTTGACTCGCAATTTTGGTGTTGATTGCATTGTGTTGCCGGATT 192
                       *********** ************************************************

consensus_13727#0      TGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTC 2216
consensus_13727#1      TGTCATGCTTTTACAATCATATTTTGCTGGCCACATCCGAGTCTGTACTGTTGCCAATTC 515
consensus_13727#2      TNTCATGCTTTTNCAATCATNTTTTGCTGGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 252
                       * ********** ******* ************ *    *      *        **   

consensus_13727#0      TGTTAAACTGATGCAGATCTGATTGAAGTTCCGCCCTTTACATGTTAAAAAAAAAA-- 2272
consensus_13727#1      TGTTAAACTGATGCAGATCTGATTGAAGTNCNNNCCTTTACATGNNNNNNNTGCGTTN 573
consensus_13727#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------------- 281
                           ***   *   * *    *   **


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)