cluster # 13733

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Oryza sativa
cluster # 13733 cluster # 13733 Sequences # 14 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13733#0 length = 1758 sequences # 13

consensus_13733#1 length = 749 sequences # 1

consensusID : consensus_13733#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1758
fasta sequence

                              [CCGGCAGCATCTGAAACCTGAGACTAGAGTCTGTCCATTCCTGCAGTTTTGCCCGTGTGTCCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGG-TTTCGTAGCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTGCACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCCTGTCTCCTATTGAAACTGCTGACATCTCACCGATCTTTCTACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAACGATTACTAGAATTCTGAGACT-AGTCACGTAAAGCTACACTCTATATTTGCATAATTCAGAA-GGTGTGTTCTTCAGTTGCAACCTTGTGCTCTCAGACATCTTAATCCTGAATTTAAAGCTTTGCTATCCAGATGCTACACCAAGCAAGGGGGGCAAGGATTTTGGTAGCTGTTGATCAATGTAGAGAAGATGTGGATATTGTACAAAGAAACCTGTGAAACTGTTAAATTTGTACAGGTTTTATTATGTCTTGAGTACCTCATACTGCAGCACAGACTCACAGAGGATGGCTTGCAAGCCACAGATTGCCAGAACCTTGAGCTCAAGCCACCGAACTAAGTCAGTTTATTATGTTTTACCTTTATTCAGAAGGAATAGTTCCGATTCAGCAACATCAACTTGATTCAGAGCTACTGCTTCTTTCTTTGGTAAGCTATGGCTTTGTATTT]

[+] EMBL AK061985             [CCGGCAGCATCTGAAACCTGAGACTAGAGTCTGTCCATTCCTGCAGTTTTGCCCGTGTGTCCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCTTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGCGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGG TTTCGTAGCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTGCACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCCTGTCTCCTATTGAAACTGCTGACATCTCACCGATCTTTCTACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAACGATTACTAGAATTCTGAGACT AGTCACGTAAAGCTACACTCTATATTTGCATAATTCAGAA GGTGTGTTCTTCAGTTGCAACCTTGTGCTCTCAGACATCTTAATCCTGAATTTAAAGCTTTGCTATCCAGATGCTACACCAAGCAAGGGGGGCAAGGATTTTGGTAGCTGTTGATCAATGTAGAGAAGATGTGGATATTGTACAAAGAAACCTGTGAAACTGTTAAATTTGTACAGGTTTTATTATGTCTTGAGTACCTCATACTGCAGCACAGACTCACAGAGGATGGCTTGCAAGCCACAGATTGCCAGAACCTTGAGCTCAAGCCACCGAACTAAGTCAGTTTATTATGTTTTACCTTTATTCAGAAGGAATAGTTCCGATTCAGCAACATCAACTTGATTCAGAGCTACTGCTTCTTTCTTTGGTAAGCTATGGCTTTGTATTT]
[+] EMBL AK099165             [                                 TCCATTCCTGCAGTTTTGCCCGTGTGTCCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGG TTTCGTAGCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTGCACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCCTGTCTCCTATTGAAACTGCTGACATCTCACCGATCTTTCTACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAACGATTACTAGAATTCTGAGACT AGTCACGTAAAGCTACACTCTATATTTGCATAATTCAGAA GGTGTGTTCTTCAGTTGCAACCTTGTGCTCTCAGACATCTTAATCCTGAATTTAAAGCTTTGCTATCCAGATGCTACACCAAGCAAGGGGGGCAAGGATTTTGGTAGCTGTTGATCAATGTAGAGAAGATGTGGATATTGTACAAAGAAACCTGTGAAACTGTTAAATTTGTACAGGTTTTATTATGTCTTGAGTACCTCATACTGCAGCACAGACTCACAGAGGATGGCTTGCAAGCCACAGATTGCCAGAACCTTGAGCTCAAGCCACCGAACTAAGTCAGTTTATTATGTTTTACCTTTATTCAGAAGGAATAGTTCCGATT                                                               ]
[+] EMBL CB649122             [                                                 TGCCCGTGTGTCCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAATTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAG AAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGG TTTCGTAGCAGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB655322             [                                                      GTGTGCCCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB619005             [                                                        GTGTCCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB652197             [                                                                      GCCTCTCCTTTCAGCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB653323             [                                                                                CCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTATTTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB658422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGG TTTCGTAGCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTGCACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCCTGTCTCCTATTGAAACTGCTGACATCTCACCGATCTTTCTACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAACGATTACTAGAATTCTGAGACT AGTCACGTAAAGCTACACTCTATAGGTGCATAATTCAGAA GGTGTGTTCTTCAGTTG                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB619006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGG TTTCGTAGCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTGCACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCCTGTCTCCTATTGAAACTGCTGACATCTCACCGATCTTTCTACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAACGATTACTAGAATTCTGAGACT AGTCACGTAAAGCTACACTCTATATTTGCATAATTCAGAAGGGTGTGTTCTTCAGTTG                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB653324             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGG TTTCGTAGCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTGCACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCCTGTCTCCTATTGAAACTGCTGACATCTCACCGATCTTTCTACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAACGATTACTAGAATTCTGAGACT AGTCACGTAAAGCTACACTCTATATTTGCATAATTCAGAA GGTGTGTTCTTCAGTTGCAACCTTGTGCTCTCAGACATCTTAATCCTGAATTTAAAGCTTTGCTATCCAGATGCTACACCAAGCAAGGGGGGCAAGGATTTTGGTAGCTGTTGATCAATGTAGAGAAGATGTGGATATTGTACAAAGAAACCTGTGAAACTGTTAAATTTGTACAGGTTTTATTAT                                                                                                                                                                                                          ]
[-] EMBL CB655016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGTTGGATGATGAGGG TTTCGTAGCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTGCACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCATGTCTCCTATTGAAACTGCTGACATCTCACCGATCTTTCTACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAACGATTACTAGAATTCTGAGACT AGTCACGTAAAGCTACACTCTATATTTGCATAATTCAGAA GGTGTGTTCTTCAGTTGCAACCTTGTGCTCTCAGACATCTTAATCCTGAATTTAAAGCTTTGCTATCCAGATGCTACACCAAGCAAGGGGGGCAAGGATTTTGGTAGCTGTTGATCAATGTAGAGAAGATGTGGATATTGTACAAAGAAACCTGTGAAACTGTTAAATGTGTACAGGTTTTATTATGTCTTGAGTACCTCAaaaaaaaag                                                                                                                                                                                  ]
[+] EMBL BI813807             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   tGTTGGATGAAGAGGGATTTCGTACCAGAGGGTTCCAACATGAATGTTGGCTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTA CGGGTGCACGGC AAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGGGATCAGTTCAAGGAATGTGAGTGT CAGGAAGGGAAGGCGGCTGATGAGATGATGCTCATTGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGGCAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGGTCCACCTTCAGTCCGCATCCCTGTCTCCTATTAAAACTGCTGACATCTCACCGATCTTTCTACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAATGATTACTAGAATTCTGAGACT AGTCACGTAAAGCTACACTCTATATTTGCATAAaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU056553             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCCTATTGAAACTGCTNACATCTCACCGATCTTTCTACCGATATGTGATANATAACAGCACATGTATTATTCGGNACAAGGAACGNTTACTAGAATTCTGAGNCTCCGTCACGTAAAGCTACACTCTATATTTGCATAATTCAGNC GGTGTGTTCTTCCGTTGCAACCTTGTGCTCTCAGACATCTTAATCCTGAATTTAAAGCTTTGCTATCCNGATGCTACACCAAGCAAGGGGGGCAAGGATTTTGGTNGCTGTTGATCAATGTAGNGAAGATGTGGATATTGTACAAAGAAACCTGTGAAACTGTTAAATTTGTACNGGTTTTATTATGTCTTGAGTACCTNATACTGCNGNACAGACTCACNGNGGATGGCTTGCAAGCCACAGATTGCCNGAACCTTGAGCTCAAGCCACCGAACTAAGTCNGTTTATTATGTTTTACCTTTATTCAGANGGNATNGTTCCGATTCAGNNACATCAAaaaaaaaa                                           ]




>consensus_13733#0
CCGGCAGCATCTGAAACCTGAGACTAGAGTCTGTCCATTCCTGCAGTTTTGCCCGTGTGT
CCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCG
CCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTG
GAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGA
GACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCT
TGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTAT
TTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGT
CCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTT
AGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTT
TGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCA
AGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGG
TTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGC
AGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAA
AAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATT
CACCGGCATATGGTTGGATGATGAGGGTTTCGTAGCAGAGGGTTCCAACATGAATGTTGG
CTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTG
CACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGG
GATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCAT
TGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGG
CAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGG
TCCACCTTCAGTCCGCATCCCTGTCTCCTATTGAAACTGCTGACATCTCACCGATCTTTC
TACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAACGATTACTAGAA
TTCTGAGACTAGTCACGTAAAGCTACACTCTATATTTGCATAATTCAGAAGGTGTGTTCT
TCAGTTGCAACCTTGTGCTCTCAGACATCTTAATCCTGAATTTAAAGCTTTGCTATCCAG
ATGCTACACCAAGCAAGGGGGGCAAGGATTTTGGTAGCTGTTGATCAATGTAGAGAAGAT
GTGGATATTGTACAAAGAAACCTGTGAAACTGTTAAATTTGTACAGGTTTTATTATGTCT
TGAGTACCTCATACTGCAGCACAGACTCACAGAGGATGGCTTGCAAGCCACAGATTGCCA
GAACCTTGAGCTCAAGCCACCGAACTAAGTCAGTTTATTATGTTTTACCTTTATTCAGAA
GGAATAGTTCCGATTCAGCAACATCAACTTGATTCAGAGCTACTGCTTCTTTCTTTGGTA
AGCTATGGCTTTGTATTT

consensusID : consensus_13733#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 749
fasta sequence

                              [GTGTGTCCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGT]

[+] EMBL CB646851             [GTGTGTCCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGTGATACCAATCGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATTCACCGGCATATGGT]




>consensus_13733#1
GTGTGTCCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTC
GCCCCGCCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTG
CGGGTGGAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACC
AGCCGAGACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGA
AAGGCTTGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGTGATACCAAT
CGATGATCACATGGTCCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGG
GCACCTCTATGAGTTAGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAA
AATCACGCTGCCTTTTGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGC
ATCAAAATGCACCCAAGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCA
GCTATCTTCAGCTGGTTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATC
GTTACCAGTACCAGCAGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACA
GTTTGCGGTCATGAAAAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGA
AGAAAATGGTGGATTCACCGGCATATGGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13733#0      CCGGCAGCATCTGAAACCTGAGACTAGAGTCTGTCCATTCCTGCAGTTTTGCCCGTGTGT 60
consensus_13733#1      ------------------------------------------------------GTGTGT 6
                                                                             ******

consensus_13733#0      CCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCG 120
consensus_13733#1      CCTGATGATGGCCTCTCTCTCCACCCCACCTGCTACCGCCGGCGTCTCCCCGTCGCCCCG 66
                       ************************************************************

consensus_13733#0      CCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTG 180
consensus_13733#1      CCCTTCCCTCCTCGCGTACAAGAAGGCTGCTGGGCTCACCCCATCTCCATGGTGCGGGTG 126
                       ************************************************************

consensus_13733#0      GAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGA 240
consensus_13733#1      GAGGAGGGCGGCGGTGGCCACCGCAGCCACGAGCTCCAATCGGACCGCTGCACCAGCCGA 186
                       ************************************************************

consensus_13733#0      GACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCT 300
consensus_13733#1      GACCATTGTCACTGGAAATGATGTCCCTCTCTTGTCTTTTGCTGAGGTTGCAGAAAGGCT 246
                       ************************************************************

consensus_13733#0      TGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGGCCATGTACTCTAGTAT 360
consensus_13733#1      TGATGAATTCCATGCATCTGGAACCAGAAATCAAAATTACATGG---------------- 290
                       ********************************************                

consensus_13733#0      TTTTGGTGGAATTACCACAAATCCTTCTGCAATGGTGATACCAATCGATGATCACATGGT 420
consensus_13733#1      -----------------------------------TGATACCAATCGATGATCACATGGT 315
                                                          *************************

consensus_13733#0      CCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTT 480
consensus_13733#1      CCACAGAGGACATGGTGTTTTTGATACTGCAGCTATTATGAATGGGCACCTCTATGAGTT 375
                       ************************************************************

consensus_13733#0      AGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTT 540
consensus_13733#1      AGAGCAGCATCTTGACCGCTTCCTGAAGTCTGCATCAATGGCCAAAATCACGCTGCCTTT 435
                       ************************************************************

consensus_13733#0      TGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCA 600
consensus_13733#1      TGATCGGTCAACAATTCGGAGCATACTTATTCAAACTGTGAGTGCATCAAAATGCACCCA 495
                       ************************************************************

consensus_13733#0      AGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGG 660
consensus_13733#1      AGGATCACTCAGGTACTGGCTATCTGTTGGACCAGGAGACTTCCAGCTATCTTCAGCTGG 555
                       ************************************************************

consensus_13733#0      TTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGC 720
consensus_13733#1      TTGTGCAAACTCAGCCCTGTATGCTATTGTCATTGAAAGTCCATCGTTACCAGTACCAGC 615
                       ************************************************************

consensus_13733#0      AGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAA 780
consensus_13733#1      AGGATGCAAGGTGATCACATCATCGATACCGATAAAATCTCAACAGTTTGCGGTCATGAA 675
                       ************************************************************

consensus_13733#0      AAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATT 840
consensus_13733#1      AAGTGTAAACTACCTGCCAAATGCACTCACTAAAGTGGAAGGCGAAGAAAATGGTGGATT 735
                       ************************************************************

consensus_13733#0      CACCGGCATATGGTTGGATGATGAGGGTTTCGTAGCAGAGGGTTCCAACATGAATGTTGG 900
consensus_13733#1      CACCGGCATATGGT---------------------------------------------- 749
                       **************                                              

consensus_13733#0      CTTCGTGACACAAAGCAAGGAGCTCCTCATGCCCCGTTTCGACAAGATCCTTAGCGGGTG 960
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      CACGGCAAAACGGGTTCTGACCCTTGCCAAGCAGCTAGTGGCAGATGGAAGGCTCAGCGG 1020
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      GATCAGTTCAAGGAATGTGAGTGTCCAGGAAGGGAAGGCGGCTGATGAGATGATGCTCAT 1080
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      TGGTAGTGGTATTCTTGTCAAACCTGTTGTTCAGTGGGATGATCAGATAATTGGCTCAGG 1140
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      CAAAGAAGGCCCAATTGCTCAGATGCTTTTCAACCTCATTCTTGAGGACATGAGATCCGG 1200
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      TCCACCTTCAGTCCGCATCCCTGTCTCCTATTGAAACTGCTGACATCTCACCGATCTTTC 1260
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      TACAGATATGTGATAAATAACAGAACATGTATTATTAGGAACAAGGAACGATTACTAGAA 1320
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      TTCTGAGACTAGTCACGTAAAGCTACACTCTATATTTGCATAATTCAGAAGGTGTGTTCT 1380
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      TCAGTTGCAACCTTGTGCTCTCAGACATCTTAATCCTGAATTTAAAGCTTTGCTATCCAG 1440
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      ATGCTACACCAAGCAAGGGGGGCAAGGATTTTGGTAGCTGTTGATCAATGTAGAGAAGAT 1500
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      GTGGATATTGTACAAAGAAACCTGTGAAACTGTTAAATTTGTACAGGTTTTATTATGTCT 1560
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      TGAGTACCTCATACTGCAGCACAGACTCACAGAGGATGGCTTGCAAGCCACAGATTGCCA 1620
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      GAACCTTGAGCTCAAGCCACCGAACTAAGTCAGTTTATTATGTTTTACCTTTATTCAGAA 1680
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      GGAATAGTTCCGATTCAGCAACATCAACTTGATTCAGAGCTACTGCTTCTTTCTTTGGTA 1740
consensus_13733#1      ------------------------------------------------------------
                                                                                   

consensus_13733#0      AGCTATGGCTTTGTATTT 1758
consensus_13733#1      ------------------