These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13747#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1561 fasta sequence [CACAAGAAATAAAAGCACTTGCTAGCTATGCACTGTAGCAGCATTGCCGCTTTGCTTTGCTTGCTTGCCCCCACACGCTCTCTCTCTCTCTCACTAGCTAATTAGCTGCTACTACATCTTCCATCTCTCTCCTCTCTCTCTCTCTCTAGAAATAAGGAAGGAGAGAAAGAGAAAGAGAGAGAAAACCAGAAAAGAGGAAAGTGAGATAGCTCAATTTCTCCTTCCTTCCTCTCTCCATCTAATCTACACATGCACAAATGTTGCAGCTGATATATGGCTTAGCTAGCATATGCAAAGCAAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTGCTTCATCTAGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTTCCTCTCTGTTCATCACTGGCTTCGGCGGCGGCGGCCGCGGCGGCGATCGATCAGCTGTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGTCTGCCCAGATCGCTCCGGCAGAGCAAGTGTGCTATGTGCACTGCAACTTCTGCAACACGATTCTCGCGGTGAGTGTCCCAGGAAACAGCATGCTGAACATCGTGACCGTCCGGTGTGGGCACTGCACGAATCTGCTGTCAGTGAACTTGAGAGGACTGATGCACTCAGCCCCAGCACTACAAGATCATCATCATCATCATCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTTTGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCATGGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCATGCTCGCCCTCCAGAGAAGAGGCAAAGGGTACCTTCAGCCTATAACAGATTTATTAAGGAAGAGATACGAAGGATCAAAGCAAACAACCCCGACATTAGCCACAGGGAAGCCTTCAGCACAGCAGCCAAGAATTGGGCACATTATCCAAACATCCATTTTGGCCTAAGCCCTGGCCATGAGGGTGGCAAGAAGCTCGTCGACGTCGACCCCATCCCAACTGCTCCATCTTCCAAGAAGATCCAAGGTTTCTACTCATAGATTGAGGGGATCAATCTGCCGATACCGATACCGCAAATAGGAGGAAGAGCATCAAGAGCACAAAACATATATATACTGTGAGTAAA-GAAGCAAAGGAAAAAAGAAAA-GAAATGCTGCCACCTTACCTTTGTTCATGACCAAAAAACTTGTGAAGACGTATGTCATAAGTACATAGAAGAAATCAACTCATATAGAGTGAAAAAAAACATACAAAAAATCAAGCTACTATAGCTCATCGATCGACTGAAAGGCTGAATAAACCATTCGACCATAATGTTGTTACATGTATAAGTATGTTTGAAGCTAGCTAGCTGGCTAGTTCTTTATTTCCTCTTTATGTCTTCCAATGAAATTAATTTGCAAACATATTAACAGCACTGTCGACGGATGCAAAAAAGT] [+] EMBL AK070737 [CACAAGAAATAAAAGCACTTGCTAGCTATGCACTGTAGCAGCATTGCCGCTTTGCTTTGCTTGCTTGCCCCCACACGCTCTCTCTCTCTCTCACTAGCTAATTAGCTGCTACTACATCTTCCATCTCTCTCCTCTCTCTCTCTCTCTAGAAATAAGGAAGGAGAGAAAGAGAAAGAGAGAGAAAACCAGAAAAGAGGAAAGTGAGATAGCTCAATTTCTCCTTCCTTCCTCTCTCCATCTAATCTACACATGCACAAATGTTGCAGCTGATATATGGCTTAGCTAGCATATGCAAAGCAAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTGCTTCATCTAGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTTCCTCTCTGTTCATCACTGGCTTCGGCGGCGGCGGCCGCGGCGGCGATCGATCAGCTGTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGTCTGCCCAGATCGCTCCGGCAGAGCAAGTGTGCTATGTGCACTGCAACTTCTGCAACACGATTCTCGCGGTGAGTGTCCCAGGAAACAGCATGCTGAACATCGTGACCGTCCGGTGTGGGCACTGCACGAATCTGCTGTCAGTGAACTTGAGAGGACTGATGCACTCAGCCCCAGCACTACAAGATCATCATCATCATCATCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTTTGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCATGGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCATGCTCGCCCTCCAGAGAAGAGGCAAAGGGTACCTTCAGCCTATAACAGATTTATTAAGGAAGAGATACGAAGGATCAAAGCAAACAGCCCCGACATTAGCCACAGGGAAGCCTTCAGCACAGCAGCCAAGAATTGGGCACATTATCCAAACATCCATTTTGGCCTAAGCCCTGGCCATGAGGGTGGCAAGAAGCTCGTCGACGTCGACCCCATCCCAACTGCTCCATCTTCCAAGAAGATCCAAGGTTTCTACTCATAGATTGAGGGGATCAATCTGCCGATACCGATACCGCAAATAGGAGGAAGAGCATCAAGAGCACAAAACATATATATACTGTGAGTAAA GAAGCAAAGGAAAAAAGAAAA GAAATGCTGCCACCTTACCTTTGTTCATGACCAAAAAACTTGTGAAGACGTATGTCATAAGTACATAGAAGAAATCAACTCATATAGAGTGAAAAAAAACATACAAAAAATCAAGCTACTATAGCTCATCGATCGACTGAAAGGCTGAATAAACCATTCGACCATAATGTTGTTACATGTATAAGTATGTTTGAAGCTAGCTAGCTGG ] [+] EMBL AK104918 [ AAAGAGGAAAGTGAGATAGCTCAATTTCTCCTTCCTTCCTCTCTCCATCTAATCTACACATGCACAAATGTTGCAGCTGATATATGGCTTAGCTAGCATATGCAAAGCAAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTGCTTCATCTAGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTTCCTCTCTGTTCATCACTGGCTTCGGCGGCGGCGGCCGCGGCGGCGATCGATCAGCTGTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGTCTGCCCAGATCGCTCCGGCAGAGCAAGTGTGCTATGTGCACTGCAACTTCTGCAACACGATTCTCGCGGTGAGTGTCCCAGGAAACAGCATGCTGAACATCGTGACCGTCCGGTGTGGGCACTGCACGAATCTGCTGTCAGTGAACTTGAGAGGACTGATGCACTCAGCCCCAGCACTACAAGATCATCATCATCATCATCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTTTGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCATGGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCATGCTCGCCCTCCAGAGAAGAGGCAAAGGGTACCTTCAGCCTATAACAGATTTATTAAGGAAGAGATACGAAGGATCAAAGCAAACAACCCCGACATTAGCCACAGGGAAGCCTTCAGCACAGCAGCCAAGAATTGGGCACATTATCCAAACATCCATTTTGGCCTAAGCCCTGGCCATGAGGGTGGCAAGAAGCTCGTCGACGTCGACCCCATCCCAACTGCTCCATCTTCCAAGAAGATCCAAGGTTTCTACTCATAGATTGAGGGGATCAATCTGCCGATACCGATACCGCAAATAGGAGGAAGAGCATCAAGAGCACAAAACATATATATACTGTGAGTAAA GAAGCAAAGGAAAAAAGAAAA GAAATGCTGCCACCTTACCTTTGTTCATGACCAAAAAACTTGTGAAGACGTATGTCATAAGTACATAGAAGAAATCAACTCATATAGAGTGAAAAAAAACATACAAAAAATCAAGCTACTATAGCTCATCGATCGACTGAAAGGCTGAATAAACCATTCGACCATAATGTTGTTACATGTATAAGTATGTTTGAAGCTAGCTAGCTGGCTAGTTCTTTATTTCCTCTTTATGTCTTCCAATGAAATTAATTTGCAAACATAT ] [+] EMBL AU163859 [ AAAGTGAGATAGCTCAATTTCTCCTTCCTTCCTCTCTCCATCTAATCTACACATGCACAAATGTTGCAGCTGATATATGGCTTAGCTAGCATATGAAAAGCAAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTGCTTCATCTAGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTTCCTCTCTGTTCATCACTGGC ] [+] EMBL OSC922 [ AAAGTGAGATAGCTCAATTTCTCCTTCCTTCCTCTCTCCATCTAATCTACACATGCACAAATGTTGCAGCTGATATATGGCTTAGCTAGCATATGAAAAGCAAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTGCTTCATCTAGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCANCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTA ] [+] EMBL CF320792 [ CTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTGCTTCATCTAGCTCTCTCTAGTATCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTTCCTCTCTGTTCATCACTGGCTTCGGCGGCGGCGGCCGCGGCGGCGATCGATCAGCTGTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGTCTGCCCAGATCGCTCCGGCAGAGCAAGTGTGCTATGTGCACTGCAACTTCTGCAACACGATTCTCGCGGTGAGTGTCCCAGGAAACAGCATGCTGAACATCGTGACCGTCCGGTGTGGGCACTGCACGAATCTGCTGTCAGTGAACTTGAGAGGACTGATGCACTCAGCCCCAGCACTACAAGAACATCATCATCATCATCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTTTGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCATGGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCA ] [+] EMBL AU083478 [ CGATCAGCTGTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGTCTGCCCAGATCGCTCCGGCAGAGCAAGTGTGCTATGTGCACTGCAACTTCTGCAACACGATTCTCGCGGTGAGTGTCCCAGGAAACAGCATGCTGAACATCGTGACCGTCCGGTGTGGGCACTGCACGAATCTGCTGTCAGTGAACTTGAGAGGACTGATGCACTCAGCCCCAGCACTACAAGATCATCATCATCATCATCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTTTGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCATGGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCATGCTCGCCCTCCAGAGAAGAGGCAAAGGGTACCTTCAGCCTATAACAG ] [-] EMBL CF320793 [ GCCCCAGCACTACAAGAACATCATCATCATCATCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTTTGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCATGGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCATGCTCGCCCTCCAGAGAAGAGGCAAAGGGTACCTTCAGCCTATAACAGATTTATTAAGGAAGAGATACGAAGGATCAAAGCAAACAACCCCGACATTAGCCACAGGGAAGCCTTCAGCACAGCAGCCAAGAATTGGGCACATTATCCAAACATCCATTTTGGCCTAAGCCCTGGCCATGAGGGTGGCAAGAAGCTCGTCGAAATAAACCCCATCCCAACTGCTCCATCTTCCAAGAAGATCCAAGGTTTCTACTCATAGATTGAGGGGATCAATCTGCCGATACCGATACCGCAAATAGGAGGAAGAGCATCAAGAGCACAAAACATATAT GACTGT TGTAAA GAAGCAAAGGAAAAA ] [+] EMBL BI803971 [ AAGCAAACAACCCCGACATTAGCCACAGGGAAGCCTTCAGCACAGCAGCCAAGAATTGGGCACATTATCC AACATCCATTTTGGCCTAAGCCCCGGCCATGAGGGTGGCAAGAAGCTCGTCGACGTCGACCCCATCCCAACTGCTCCATCTTCCAAGAAGATCCAAGGTTTCTACTCATAGATTGAGGGGATCAATCTGCCGACACCGATACCGC AATAGGAGGAAGAGCATCAAGAGCAC AAACATATATATACTGTGAGTAAA GAAGC AAGGAAAAA ] [+] EMBL BI796372 [ CTTCCAAGAAGATCCAAGGTTTCTACTCATAGATTGAGGGGATCAATCTGCCGACACCGATACCGCAAATAGGAGGAAGAGCATCAAGAGCAC AACATATATATACTGTGAGTAAA GAAGC AAGGAAAAAAGAAAA AAAATGCTGCCACCTTACCTTTGTTCATGACC AAAAACTTGTGAAGACGTACGTCATAAGTACATAGAAGAAATCAACTCATATAGAGTG AAAAAAACATAC AAAAATCAAGCTACTATAGCTCATCGATCGACTGAAAGGCTGAATAAACCATTTGACCATAATGTTGTTACATGTATAAGTATGTTTGAAGCTAGCTAGCTGGCTAGTTCTTTATTTCCTCTTTATGTCTTCC ATGAAATTAATTTGCAAACATATTAACAGCACTGTCGACGGATGCAAAAA ] [-] EMBL C72843 [ AAAACATATATATACTGTGAGTAAAGGAAGCAAAGGAAAAAAGAAAAGGAAATGCTGCCACCTTACCTTTGTTCATGACCAAAAAACTTGTGAAGACGTATGTCATAAGTACATAGAAGAAATCAACTCATATAGAGTGAAAAAAAACATACAAAAAATCAAGCTACTATAGCTCATCGATCGACTGAAAGGCTGAATAAACCATTCGACCATAATGTTGTTACATGTATAAGTATGTTTGAAGCTAGCTAGCTGGCTNGTTCTTTATTTCCTCTTTATGTCTTCCAATGAAATTAATTTGCAAACATATTAACAGCACTGTCGACGGATGCAAATCAGT] consensusID : consensus_13747#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 676 fasta sequence [ATATATGGCTTAGCTAGCATATGCAAAGCAAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTGCTTCATCTAGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTTCCTCTCTGTTCATCACTGGCTTCGGTGGCGGCGGCCGCGGCGGCGATCGATCAGCTGTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGTCTGCCCAGATCGCTCCGGCAGAGCAAGTGTGCTATGTGCACTGCAACTTCTGCAACACGATTCTCGCGGTGAGTGTCCCAGGAAACAGCATGCTGAACATCGTGACCGTCCGGTGTGGGCACTGCACGAATCTGCTGTCAGTGAACTTGAGAGGACTGATGCACTCAGCCCCAGCACTACAAGATCATCATCATCATCATCATCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTTTGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCATGGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCATGCTCGCCGGAA] [+] EMBL BF430453 [ATATATGGCTTAGCTAGCATATGCAAAGCAAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTGCTTCATCTAGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTTCCTCTCTGTTCATCACTGGCTTCGGTGGCGGCGGCCGCGGCGGCGATCGATCAGCTGTGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGTCTGCCCAGATCGCTCCGGCAGAGCAAGTGTGCTATGTGCACTGCAACTTCTGCAACACGATTCTCGCGGTGAGTGTCCCAGGAAACAGCATGCTGAACATCGTGACCGTCCGGTGTGGGCACTGCACGAATCTGCTGTCAGTGAACTTGAGAGGACTGATGCACTCAGCCCCAGCACTACAAGATCATCATCATCATCATCATCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTTTGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCATGGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCATGCTCGCCGGAA] consensusID : consensus_13747#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 471 fasta sequence [AAGCCCTGGCCATTGAGGNTGGCAAGAAGCTCGTCGACGTCGACCCCATCCCCAACTGCTCCATCTTCCAAGAAGATCCCAAGGTTTCTACTCATAGATTGAGGGGATCAATCTGCCGATACCGATACCGCAAATAGGAGGAAGAGCATCAAGAGCACAAAACATATATATACTGTGAGTAAAGAAGCAAAGGAAAAAAGAAAAGAAATGCTGCCACCTTACCTTTGTTCATGACCAAAAAACTTGTGAAGNCGTATGTCATAAGTACATAGAAGAAATCAACTCATATAGAGTGAAAAAAAACATACAAAAAATCAAACTACTATAGCTCATCGATCGACTGAAAGGCTGAATAAACCATTCGACCATAATGTTGTTACATGTATAAGTATGTTTGAAGCTAGCTAGCTGGCTAGTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG] [+] EMBL AU083477 [AAGCCCTGGCCATTGAGGNTGGCAAGAAGCTCGTCGACGTCGACCCCATCCCCAACTGCTCCATCTTCCAAGAAGATCCCAAGGTTTCTACTCATAGATTGAGGGGATCAATCTGCCGATACCGATACCGCAAATAGGAGGAAGAGCATCAAGAGCACAAAACATATATATACTGTGAGTAAAGAAGCAAAGGAAAAAAGAAAAGAAATGCTGCCACCTTACCTTTGTTCATGACCAAAAAACTTGTGAAGNCGTATGTCATAAGTACATAGAAGAAATCAACTCATATAGAGTGAAAAAAAACATACAAAAAATCAAACTACTATAGCTCATCGATCGACTGAAAGGCTGAATAAACCATTCGACCATAATGTTGTTACATGTATAAGTATGTTTGAAGCTAGCTAGCTGGCTAGTTCTTTAAAAAAAAAAAAAAAAAAA ] [-] EMBL AU175155 [ CACCTTACCTTTGGTCNTGNCCNAAAAACTTGTGAAGNCGTNTGTCATAAGTACATAGNAGAAATCNACTCATATAGAGTGNAAAAAAACATACNAAAAATCAAGCTACTATAGCTCATCGNTCGACTGNAAGGCTGAATAAACCATTCGNCCATAATGTTGTTACATGTATAAGTNTGTTTGAAGCTAGCTAGCTGGCTAGTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG] consensusID : consensus_13747#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 388 fasta sequence [GAAAGAGAGAGAAAACCAGAAAAGAGGAAAGTGAGATAGCTCAATTTCTCCTTCCTTCCTCTCTCCATCTAATCTACACATGCACAAATGTTGCAGCTGATATATGGCTTAGCTAGCATATGCAAAGCAAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTNCTTCATCTAGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTNCCTCTCTGGTTCATCACTGGCTTCGGCGGCGGCGGCCCCACCCGCGGTGGGAGCTCCAGCTTTTTGGTTCCTTTAGGTGAGGGGTAATTNCGGCCTTTGGGNAAATC] [+] EMBL AU066273 [GAAAGAGAGAGAAAACCAGAAAAGAGGAAAGTGAGATAGCTCAATTTCTCCTTCCTTCCTCTCTCCATCTAATCTACACATGCACAAATGTTGCAGCTGATATATGGCTTAGCTAGCATATGCAAAGCAAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTACATACTCCCAGTACTNCTTCATCTAGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAACCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTNCCTCTCTGGTTCATCACTGGCTTCGGCGGCGGCGGCCCCACCCGCGGTGGGAGCTCCAGCTTTTTGGTTCCTTTAGGTGAGGGGTAATTNCGGCCTTTGGGNAAATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 CACAAGAAATAAAAGCACTTGCTAGCTATGCACTGTAGCAGCATTGCCGCTTTGCTTTGC 60 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 TTGCTTGCCCCCACACGCTCTCTCTCTCTCTCACTAGCTAATTAGCTGCTACTACATCTT 120 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 --------------------------------------------------GAAAGAGAGA 10 consensus_13747#0 CCATCTCTCTCCTCTCTCTCTCTCTCTAGAAATAAGGAAGGAGAGAAAGAGAAAGAGAGA 180 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 GAAAACCAGAAAAGAGGAAAGTGAGATAGCTCAATTTCTCCTTCCTTCCTCTCTCCATCT 70 consensus_13747#0 GAAAACCAGAAAAGAGGAAAGTGAGATAGCTCAATTTCTCCTTCCTTCCTCTCTCCATCT 240 consensus_13747#2 ---------------------------------------------AAGCCCTGGCCATTG 15 consensus_13747#1 -----------------------------ATATATGGCTTAGCTAG--CATATGCAAAGC 29 consensus_13747#3 AATCTACACATGCACAAATGTTGCAGCTGATATATGGCTTAGCTAG--CATATGCAAAGC 128 consensus_13747#0 AATCTACACATGCACAAATGTTGCAGCTGATATATGGCTTAGCTAG--CATATGCAAAGC 298 consensus_13747#2 AGGNTGGCAAGAAGCT--CGTCGACGTCGACCCCATCCCCAACTGCTCCATCTTCCAAG- 72 * * * ** *** * * *** consensus_13747#1 AAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTA--CATACTCCCAGTACTGCTTCATCT 87 consensus_13747#3 AAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTA--CATACTCCCAGTACTNCTTCATCT 186 consensus_13747#0 AAGCCTTCCTGCAGTCTAGTCACCTCTCAAGCTA--CATACTCCCAGTACTGCTTCATCT 356 consensus_13747#2 AAGATCCCAAGGTTTCTACTCATAGATTGAGGGGATCAATCTGCCGATACCGATACCGCA 132 *** * * **** *** * ** ** ** ** *** * * * consensus_13747#1 AGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAA 147 consensus_13747#3 AGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAA 246 consensus_13747#0 AGCTCTCTCTAGTAGCTAGCTCTATCATCATCGATCATCCTCCTCTCACCGGCCGGCCAA 416 consensus_13747#2 AA-----TAGGAGGAAGAGCATCAAGAGCACAAAACATATATATACTGTGAGTAAAGAAG 187 * * *** * * ** * *** * * * consensus_13747#1 CCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTTCCTCTCTG-TTCATCACTGGCTT-C 205 consensus_13747#3 CCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTNCCTCTCTGGTTCATCACTGGCTT-C 305 consensus_13747#0 CCCAAGAAGAGATTATTCCTCTTCATCTTCTTCTTCCTCTCTG-TTCATCACTGGCTT-C 474 consensus_13747#2 CAAAGGAAAAAAGAAAAGAAATGCTGCCACCTTACCTTTGTTCATGACCAAAAAACTTGT 247 * * *** * * * * * * * * * * * * * *** consensus_13747#1 GGTGGCGGCGGCCGCGGCGGCGATCGA----TCAGCT--GTGAGAAGAAGAAGAAGAAGA 259 consensus_13747#3 GGCGGCGGCGGCCCCACCCGCGGTGGGAGCTCCAGCT--TTTTGGTTCCTTTAGGTGAGG 363 consensus_13747#0 GGCGGCGGCGGCCGCGGCGGCGATCGA----TCAGCT--GT------------GAGAAGA 516 consensus_13747#2 GAAGNCGTATGTCATAAGTACATAGAAGAAATCAACTCATATAGAGTGAAAAAAAACATA 307 * * ** * * * ** ** * consensus_13747#1 AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGTCTGCCCAGATCGCTCCGGC 319 consensus_13747#3 GGTAATTNCGGCCTTTGGGNAAATC----------------------------------- 388 consensus_13747#0 AGAAGAAGAAGAAGAAGAAGAAAT---------------GTCTGCCCAGATCGCTCCGGC 561 consensus_13747#2 CAAAAAATCAAACTACTATAGCTCATCGATCGACTGAAAGGCTGAATAAACCATTCGACC 367 * consensus_13747#1 AGAGCAAGTGTGCTATGTGCACTGCAACTTCTGCAACACGATTCTCGCGGTGAGTGTCCC 379 consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 AGAGCAAGTGTGCTATGTGCACTGCAACTTCTGCAACACGATTCTCGCGGTGAGTGTCCC 621 consensus_13747#2 A---TAATGTTGTTACATGTATAAGTATGTTTGAAGCTAGCTAGCT--GGCTAGTTCTTT 422 consensus_13747#1 AGGAAACAGCATGCTGAACATCGTGACCGTCCGGTGTGGGCACTGCACGAATCTGCTGTC 439 consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 AGGAAACAGCATGCTGAACATCGTGACCGTCCGGTGTGGGCACTGCACGAATCTGCTGTC 681 consensus_13747#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG----------- 471 consensus_13747#1 AGTGAACTTGAGAGGACTGATGCACTCAGCCCCAGCACTACAAGATCATCATCATCATCA 499 consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 AGTGAACTTGAGAGGACTGATGCACTCAGCCCCAGCACTACAAGATCATCATCATCATCA 741 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 TCATCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTT 559 consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 ---TCTCCAGGAGAGTGGTCTGAGCGGATGCTTCCGTGATCAAAGTGGCTATCCGGAGTT 798 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 TGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCAT 619 consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 TGGTTTTTCTGCAGCTTCGTCGTCTTCCAAGCTCAGGCTGCCTCCTGCTGCTGCTGCCAT 858 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 GGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCATGCTCGCCGGAA--- 676 consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 GGTTTCCTACTCGCAGCAAAACCAGCAGCTCGAGCAAGCTCTCCATGCTCGCCCTCCAGA 918 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 GAAGAGGCAAAGGGTACCTTCAGCCTATAACAGATTTATTAAGGAAGAGATACGAAGGAT 978 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 CAAAGCAAACAACCCCGACATTAGCCACAGGGAAGCCTTCAGCACAGCAGCCAAGAATTG 1038 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 GGCACATTATCCAAACATCCATTTTGGCCTAAGCCCTGGCCATGAGGGTGGCAAGAAGCT 1098 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 CGTCGACGTCGACCCCATCCCAACTGCTCCATCTTCCAAGAAGATCCAAGGTTTCTACTC 1158 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 ATAGATTGAGGGGATCAATCTGCCGATACCGATACCGCAAATAGGAGGAAGAGCATCAAG 1218 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 AGCACAAAACATATATATACTGTGAGTAAAGAAGCAAAGGAAAAAAGAAAAGAAATGCTG 1278 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 CCACCTTACCTTTGTTCATGACCAAAAAACTTGTGAAGACGTATGTCATAAGTACATAGA 1338 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 AGAAATCAACTCATATAGAGTGAAAAAAAACATACAAAAAATCAAGCTACTATAGCTCAT 1398 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 CGATCGACTGAAAGGCTGAATAAACCATTCGACCATAATGTTGTTACATGTATAAGTATG 1458 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------------------------ consensus_13747#3 ------------------------------------------------------------ consensus_13747#0 TTTGAAGCTAGCTAGCTGGCTAGTTCTTTATTTCCTCTTTATGTCTTCCAATGAAATTAA 1518 consensus_13747#2 ------------------------------------------------------------ consensus_13747#1 ------------------------------------------- consensus_13747#3 ------------------------------------------- consensus_13747#0 TTTGCAAACATATTAACAGCACTGTCGACGGATGCAAAAAAGT 1561 consensus_13747#2 ------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||