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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13751#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2192 fasta sequence
[CATTCGCATTCGCATCTCCCCCGCTTCCTCTCCTCCGCCGCCCCAAAACCCTAGCGGCGAGCGAGCGAGCGAGCCATCCATCACCCATGGCCCGCAAGCGCCGCGCGCCGACGCCCCCGCACCCGCCGCCGCCGCCTCCCGAGGCCGAGTCCTCCGCGGATTCAAGCGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGTCTCCCGTCGCCCCACCGCCCCAGAAGCCCAGCGGCCGCGGCGCCGCCTCGTCGGATGAGGAGGAGGAGGAGGAGGAGGACTCCGACACTGACACCTACGCCCAAGGTTTCCAGCTTCGGAAGGTTGGCGGCGGCGACGAGGAAGGGGAGGAGGTGGAAGGCGACTCGTCGGAGTCGGAGCCGGAGCCGGAGCCCGTCAAGAAGGAGTCGGCGAAGAAGGCCAAAGCCGAGGCCAAGAAGAAGAGGGCCGCGCCTGAGCCCGCGCCGTCGGGCAAGGCCAAGAAGGCCAAGCCGGAGAAGTCGTCGTCGGCGGCGGCGCCTGAGCCCGCTCCCTCCTCGGGCAAGTCCAAGAAGGCAGCCAAGGCTGAGGCTGCGAAAGCGGCTGCCGCTGAGCCGGCTCCTTCTACCGGCAAGGTGAGCAAGTACAATTTGGCGCCGGAGCCCTCGCCGTCAAGCAAGTCTGGGAAGGCCCTATCGCGATGGACGACGGATGACGAGGTCAAGATTCTTGAGGTCCTCGTGGCCCATTTCAAGAGCCACGGCACTCAGCTTAAAGTTGAGGGGATCATCGCTGCTGTCGGCGATAGCCTCGAGAGGAAGAGCATCAAGTATTCGGACATGTATGAGAAGGTGCGGAGGCTCAAGCAGCGGTACGAGGCCACTGCCAAGAAAGTTGAACACGGCGGCGACCTACCAGCTAAAGAGGATGACCTGCGGATGTATCAGCTATCGTCGGAAATCTGGGGAAAGAACGCAAAGGATGCTGGCAATTCGTCAAAGAACAAGAAGGGGCAA-GCTAAGAAAGATAAGGTGAGTGGAGATTCAAAGGAAGCCGCCAAGGAAGATAAGGTGGATGAAGCCGCCATTGCTGTGAATGAAAAGGGTGGTACTCTGGCAGAGAATAAGAAGGGGAAAACCAACAAGCAGAAAACAGGTATGGAAACAAAGGTTGGATCATCTAAGGAGGCTGCTCTTGCTGCTAGTCCAACCAAGGGTAAGAAGAAGGGAAGCCACAAAGACAAATTGGATGAAGAAGCAAAGAGTGGCACGGCAAAGGTGACCTCCACAATTGCCACTGATGATGATGATGGAACTTTGGGTGGGAGTAAGAGGGAGAAGGCTGGCAAAGAGGAATTGGATGGGGACACACATATCGTCATGCCAAAGGAGGCCACCACAACTGCCGCTAGCGATGATGGTACTTTGGTTGGGAGTAAGAAGGGGAAGGCTGACAATGGGAAATTGGATGGCGACACACACAGTGTTATGCCAAAGGAGGCCACCGCTGGCACCCAAAATGGTGGCATCCTAACAGGAGGGGAAAATCACAAAGAAAAAGTAGATAAAGATGCTAATGTACCAAGCATACGGAGGG-AGTATGCTGAATTGCAGAGTTTGTATCCCAACCTTGCTTCCTTTGT-GAAC-GGAATTGAGGCCCAGCATCCATGTGGA-TCAACCTTCAAGA-GAGCTTTTGAGTTCATTAGTGATGATAAGGCTTGCACCCTGGAATCCA-AGATCA-AGAAGCAGAAGATAGCGGAAGTGAGAATGCAGCTCCGTCTAGCAGACACGAAGAAGGAAGTAGCCAATGCTTTGTTAGGATTGCTGGACTAAAACATTGCGGTGCTGACATCCTTTTTGTGCGATGGTTGTATTGAAGATTCAAGTTGCAGAAGATTTTTGGCTTGTGGAGCTAAGGGATATGACGTGACGAGTTGAGCTACTGGGTTTTCTGTCTCTGGTTCTCGAGAGCTATTCTGTGAACGGTTGTTTATGTGATTAGATGGTAGTATCCCTTTAATCTATGAGTTAGCAATGGAGCTGATGACAGTTTAATTAACTCCTGTATCTATGATGGCATTTGGCTTTAATTAGGAGGTGTGCCTAATTAAGGGGGTTCTATAAATTTGGGATATGCGTGATGCTGATATTGACCCGAAATCCCGTAATCCTGCTTATTTTGTTGCCCGGTTTAAAAAAAAA]
[+] EMBL AK102886 [CATTCGCATTCGCATCTCCCCCGCTTCCTCTCCTCCGCCGCCCCAAAACCCTAGCGGCGAGCGAGCGAGCGAGCCATCCATCACCCATGGCCCGCAAGCGCCGCGCGCCGACGCCCCCGCACCCGCCGCCGCCGCCTCCCGAGGCCGAGTCCTCCGCGGATTCAAGCGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGTCTCCCGTCGCCCCACCGCCCCAGAAGCCCAGCGGCCGCGGCGCCGCCTCGTCGGATGAGGAGGAGGAGGAGGAGGAGGACTCCGACACTGACACCTACGCCCAAGGTTTCCAGCTTCGGAAGGTTGGCGGCGGCGACGAGGAAGGGGAGGAGGTGGAAGGCGACTCGTCGGAGTCGGAGCCGGAGCCGGAGCCCGTCAAGAAGGAGTCGGCGAAGAAGGCCAAAGCCGAGGCCAAGAAGAAGAGGGCCGCGCCTGAGCCCGCGCCGTCGGGCAAGGCCAAGAAGGCCAAGCCGGAGAAGTCGTCGTCGGCGGCGGCGCCTGAGCCCGCTCCCTCCTCGGGCAAGTCCAAGAAGGCAGCCAAGGCTGAGGCTGCGAAAGCGGCTGCCGCTGAGCCGGCTCCTTCTACCGGCAAGGTGAGCAAGTACAATTTGGCGCCGGAGCCCTCGCCGTCAAGCAAGTCTGGGAAGGCCCTATCGCGATGGACGACGGATGACGAGGTCAAGATTCTTGAGGTCCTCGTGGCCCATTTCAAGAGCCACGGCACTCAGCTTAAAGTTGAGGGGATCATCGCTGCTGTCGGCGATAGCCTCGAGAGGAAGAGCATCAAGTATTCGGACATGTATGAGAAGGTGCGGAGGCTCAAGCAGCGGTACGAGGCCACTGCCAAGAAAGTTGAACACGGCGGCGACCTACCAGCTAAAGAGGATGACCTGCGGATGTATCAGCTATCGTCGGAAATCTGGGGAAAGAACGCAAAGGATGCTGGCAACTCGTCAAAGAACAAGAAGGGGCAA GCTAAGAAAGATAAGGTGAGTGGAGATTCAAAGGAAGCCGCCAAGGAAGATAAGGTGGATGAAGCCGCCATTGCTGTGAATGAAAAGGGTGGTACTCTGGCAGAGAATAAGAAGGGGAAAACCAACAAGCAGAAAACAGGTATGGAAACAAAGGTTGGATCATCTAAGGAGGCTGCTCTTGCTGCTAGTCCAACCAAGGGTAAGAAGAAGGGAAGCCACAAAGACAAATTGGATGAAGAAGCAAAGAGTGGCACGGCAAAGGTGACCTCCACAATTGCCACTGATGATGATGATGGAACTTTGGGTGGGAGTAAGAGGGAGAAGGCTGGCAAAGAGGAATTGGATGGGGACACACATATCGTCATGCCAAAGGAGGCCACCACAACTGCCGCTAGCGATGATGGTACTTTGGTTGGGAGTAAGAAGGGGAAGGCTGACAATGGGAAATTGGATGGCGACACACACAGTGTTATGCCAAAGGAGGCCACCGCTGGCACCCAAAATGGTGGCATCCTAACAGGAGGGGAAAATCACAAAGAAAAAGTAGATAAAGATGCTAATGTACCAAGCATACGGAGGG AGTATGCTGAATTGCAGAGTTTGTATCCCAACCTTGCTTCCTTTGT GAAC GGAATTGAGGCCCAGCATCCATGTGGA TCAACCTTCAAGA GAGCTTTTGAGTTCATTAGTGATGATAAGGCTTGCACCCTGGAATCCA AGATCA AGAAGCAGAAGATAGCGGAAGTGAGAATGCAGCTCCGTCTAGCAGACACGAAGAAGGAAGTAGCCAATGCTTTGTTAGGATTGCTGGACTAAAACATTGCGGTGCTGACATCCTTTTTGTGCGATGGTTGTATTGAAGATTCAAGTTGCAGAAGATTTTTGGCTTGTGGAGCTAAGGGATATGACGTGACGAGTTGAGCTACTGGGTTTTCTGTCTCTGGTTCTCGAGAGCTATTCTGTGAACGGTTGTTTATGTGATTAGATGGTAGTATCCCTTTAATCTATGAGTTAGCAATGGAGCTGATGACAGTTTAATTAACTCCTGTATCTATGATGGCATTTGGCTTTAATTAGGAGGTGTGCCTAATTAAGGGGGTTCTATAACTTTGGGATATGCGTGATGCTGATATTGACCCGAAATCCCGTAATCCTGCTTATTTTGTTGCCC ]
[+] EMBL AK073147 [ CAAGTATTCGGACATGTATGAGAAGGTGCGGAGGCTCAAGCAGCGGTACGAGGCCACTGCCAAGAAAGTTGAACACGGCGGCGACCTACCAGCTAAAGAGGATGACCTGCGGATGTATCAGCTATCGTCGGAAATCTGGGGAAAGAACGCAAAGGATGCTGGCAATTCGTCAAAGAACAAGAAGGGGCAA GCTAAGAAAGATAAGGTGAGTGGAGATTCAAAGGAAGCCGCCAAGGAAGATAAGGTGGATGAAGCCGCCATTGCTGTGAATGAAAAGGGTGGTACTCTGGCAGAGAATAAGAAGGGGAAAACCAACAAGCAGAAAACAGGTATGGAAACAAAGGTTGGATCATCTAAGGAGGCTGCTCTTGCTGCTAGTCCAACCAAGGGTAAGAAGAAGGGAAGCCACAAAGACAAATTGGATGAAGAAGCAAAGAGTGGCACGGCAAAGGTGACCTCCACAATTGCCACTGATGATGATGATGGAACTTTGGGTGGGAGTAAGAGGGAGAAGGCTGGCAAAGAGGAATTGGATGGGGACACACATATCGTCATGCCAAAGGAGGCCACCACAACTGCCGCTAGCGATGATGGTACTTTGGTTGGGAGTAAGAAGGGGAAGGCTGACAATGGGAAATTGGATGGCGACACACACAGTGTTATGCCAAAGGAGGCCACCGCTGGCACCCAAAATGGTGGCATCCTAACAGGAGGGGAAAATCACAAAGAAAAAGTAGATAAAGATGCTAATGTACCAAGCATACGGAGGG AGTATGCTGAATTGCAGAGTTTGTATCCCAACCTTGCTTCCTTTGT GAAC GGAATTGAGGCCCAGCATCCATGTGGA TCAACCTTCAAGA GAGCTTTTGAGTTCATTAGTGATGATAAGGCTTGCACCCTGGAATCCA AGATCA AGAAGCAGAAGATAGCGGAAGTGAGAATGCAGCTCCGTCTAGCAGACACGAAGAAGGAAGTAGCCAATGCTTTGTTAGGATTGCTGGACTAAAACATTGCGGTGCTGACATCCTTTTTGTGCGATGGTTGTATTGAAGATTCAAGTTGCAGAAGATTTTTGGCTTGTGGAGCTAAGGGATATGACGTGACGAGTTGAGCTACTGGGTTTTCTGTCTCTGGTTCTCGAGAGCTATTCTGTGAACGGTTGTTTATGTGATTAGATGGTAGTATCCCTTTAATCTATGAGTTAGCAATGGAGCTGATGACAGTTTAATTAACTCCTGTATCTATGATGGCATTTGGCTTTAATTAGG ]
[+] EMBL CA764735 [ GGATGACCTGCGGATGTATCAGCTATCGTCGGAAATCTGGGGAAAGAACGCAAAGGATGCTGGCAATTCGTCAAAGAACAAGAAGGGGCAACGCTAAGAAAGATAAGGTGAGTGGAGATTCAAAGGAAGCCGCCAAGGAAGATAAGGTGGATGAAGCCGCCATTGCTGTGAATGAAAAGGGTGGTACTCTGGCAGAGAATAAGAAGGGGAAAACCAACAAGCAGAAAACAGGTATGGAAACAAAGGTTGGATCATCTAAGGAGGCTGCTCTTGCTGCTAGTCCAACCAAGGGTAAGAAGAAGGGAAGCCACAAAGACAAATTGGATGAAGAAGCAAAGAGTGGCACGGCAAAGGTGACCTCCACAATTGCCACTGATGATGATGATGGAACTTTGGGTGGGAGTAAGAGGGAGAAGGCTGGCAAAGAGGAATTGGATGGGGACACACATATCGTCATGCCAAAGGAGGCCACCACAACTGCCGCTAGCGATGATGGTACTTTGGTTGGGAGTAAGAAGGGGAAGGCTGACAATGGGAAATTGGATGGCGACACACACAGTGTTATGCCAAAGGAGGCCACCGCTGGCACCCAAAATGGTGGCATCCTAACAGGAGGGGAAAATCACAAAGAAAAAGTAGATAAAGATGCTAATGTACCAAGCATACGGAGGGNAGTATGCTGAATTGCAGAGNTTGTATCCCAACCTTGCTTCCTTTGTGGAACGGGAATTGAGGCCCAGCATNCATGTGNATTCAACCTTCAAGANGAGCTTTTGAGTTCATTAGNGATGAT ]
[+] EMBL AU030272 [ AAAGGAAGCCGCCAAGGAAGATAAGGTGGATGAAGCCGCCATTGCTGTGAATGAAAAGGGTGGTACTCTGGCAGAGAATAAGAAGGGGAAAACCAACAAGCAGAAAACAGGTATGGAAACAAAGGTTGGATCATCTAAGGAGGCTGCTCTTGCTGCTAGTCCAACCAAGGGTAAGAAGAAGGGAAGCCACAAAGACAAATTGGATGAAGAAGCAAAGAGTGGCACGGCAAAGGTGACCTCCACAATTGCCACTGATGATGATGATGGGACTTTGGGTGGGAGTAAGAGGGAGAAGGCTGGCAAAGAGG ATTTGATGGGGACACACATATCGTCATGCCAAAGGAGGCCACCACACTTGCCGCTAGCGATGATGGnct ]
[+] EMBL AU030273 [ CTAATGTACCAAGCATACGGAGGG ANTATGCTGAATTGCAGAGTTTGTATCCCAACCTTGCTTCCTTTGT GANC GGAATTGAGNCCCAGCATCCATGTGGA TCANCCTTCAAGA GAGC TTAGAGTTCATTAGTGATGATAAGGCTTGCNCCCTGGAATCCA AGATCA AGAAGCAGAAGATAGCGGAAGTGAGAATGCAGCTCCGTCTAGCAGACACGAAGAAGGAAGTAGCCAATGCTTTGTTAGGATTGCTGGACTAAAACATTGCGGTGCTGACATCCTTTTTGTGCGATGGTTGTATTGAAGATTCAAGTTGCAGAAGATTTTTGGCTTGTGGAGCTAAGGGATATGACGTGACGAGTTGAGCTACTGGGTTTTCTGTCTCTGGTTCTCGAGAGCTATTCTGTGAACGGTTGTTTATGTGATTAGATGGTAGTATCCCTTTAATCTATGAGTTAGCAATGGAGCTGATGACAGTTTAATTAACTCCTGTATCTATGATGGCATTTGGCTTTAATTAGGAGGTGTGCCTAATTAAGGGGGTTCTATAAAaaaaaaaa ]
[+] EMBL BI809154 [ TAGTGATGATAAGGCTTGCACCCTGGAATCCACAGATCACAGAA CAGAAGATAGCGGAAGTGAGAATGCAGCTCCGTCTA CAGACCCGAAGAAGGAAGTAGCCCATGCTTTGTTAGGATTGCTGGACTAAAACCTTGCGGTGCTGACATCCTTTTTGTGCGATGGTTGTATTGAAGATTCAAGTTGCAGAAGATTTTTGGCTTGTGGAGCTAAGGGATATGACGTGACGAGTTGAGCTACTGGGTTTTCTGTCTCTGGTTCTCGAGAGCTATTCTGTGAACGGTTGTTTATGTGATTAGATGGTAGTATCCCTTTAATCTATGAGTTAGCCATGGAGCTGATGAC GTTTAATTAACTCCTGTATCTATGATGGCATTTGGCTTTAATTAGGAGGTGTGCCTAATTAAGGGGGTTCTATAACTTTGGGATATGCGTGATGCTGATATTGACCCGAAATCCCGTAATCCTGCTTATTTTGTTGCCCGGTTTAAAAAAAAA]
[+] EMBL AU063175 [ GATAGCGGAAGTGAGAATGCAGCTCCGTCTAGCAGACACGAAGAAGGAAGTAGCCAATGCTTTGTTAGGATTGCTGGACTAAAACATTGCGGTGCTGACATCCTTTTTGTGCGATGGTTGTATTGAAGATTCAAGTTGCAGAAGATTTTTGGCTTGTGGAGCTAAGGGATATGACGTGACGAGTTGAGCTACTGGGTTTTCTGTCTCTGGTTCTCGAGAGCTATTCTGTGAACGGTTGTTTATGTGATTAGATGGTAGTATCCCTTTAATCTATGAGTTAGCAATGGAGCTGATGACAGTTTAATTAACTCCTGTATCTATGATGGCATTTGGCTTTAATTAGGAGGTGTGCCTAATTAAGGGGGTTCTAAAAA ]
[+] EMBL AU063185 [ GATAGCGGAAGTGAGAATGCAGCTCCGTCTAGCAGACACGAAGAAGGAAGTAGCCAATGCTTTGTTAGGATTGCTGGACTAAAACATTGCGGTGCTGACATCCTTTTTGTGCGATGGTTGTATTGAAGATTCAAGTTGCAGAAGATTTTTGGCTTGTGGAGCTAAGGGATATGACGTGACGAGTTGAGCTACTGGGTTTTCTGTCTCTGGTTCTCGAGAGCTATTCTGTGAACGGTTGTTTATGTGATTAGATGGTAGTATCCCTTTAATCTATGAGTTAGCAATGGAGCTGATGACAGTTTAATTAACTCCTGTATCTATGATGGCATTTGGC TTAATTAGGAGGTGTGCCTAATTAAGGGGGTTCTAAAAA ]
consensusID : consensus_13751#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1459 fasta sequence
[TCGCATCTCCCCCGCTTCCTCTCCTCCGCCGCCCCAAAACCCTAGCGGCGAGCGAGCGAGCGAGCCATCCATCACCCATGGCCCGCAAGCGCCGCGCGCCGACGCCCCCGCCCCCGCCGCCGCCGCCTCCCGAGGCCGAGTCCTCCGCGGATTCAAGCGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGTCTCCCGTCGCCCCACCGCCCCAGAAGCCCAGCGGCCGCGGCGCCGCCTCGTCGGATGAGGAGGAGGAGGAGGGGGAGGACTCCGACACTGACACCTACGCCCAAGGTTTCCAGCTTCGGAAGGTTGGCGGCGGCGACGAGGAAGGGGAGGAGGTGGAAGGCGACTCGTCGGAGTCGGAGCCGGAGCCGGAGCCCGTCAAGAAGGAGTCGGCGAAGAAGGCCAAAGCCGAGGCCAAGAAGAAGAGGGCCGCGCCTGAGCCCGCGCCGTCGGGCAAGGCCAAGAAGGCCAAGCCGGAGAAGTCGTCGTCGGCGGCGGCGCCTGAGCCCGCTCCCTCCTCGGGCAAGTCCAAGAAGGCAGCCAAGGCTGAGGCTGCGAAAGCGGCTGCCGCTGAGCCGGCTCCTTCTACCGGCAAGGTGAGCAAGTGTTCTCTTCAGCACACTCCCACTGTGGGAGTCCCACAAAACCCCCCCTCCTCTCCTCCTCTGGCTCCCTCTGCCACCCAGCCACCACAGGATGGCATCCTCCTCCTCACCTCCACTCCTCCTCCTCGTCTCCCTCCTCGCCGCCGTCGCCGCCGCCTTCCTCGCGGCGCAAGCTCTCGCCCAACACCAACCCCAAGGAAATGATACGGCGGCGGCGGGGGAGGGGTGGAGGCCGAGGCTGAGGAAGACGTACGTGGAGGGCGGCGCCGCCGGGATGGTGCCGCGGCGGCGGAGGCTGGTGGGGAGGTTCCAGATATGCGCGGTGTGCACCTGCTGCGGGGGCCCGCACGGGGTGTGCATCCCGGCGCCCTGCTGCTACGCCATCAACTGCAACATCCCGAACCGCCCCTTCGGCGTCTGCTCCTTCACCCCGCGAACCTGCAACTGCCTCAACTGCCACCTCTAGCAGATATGCAGCACAGCACATCAGCCA-AGAAAATCAGGCA-AGA-AACCCCAAGTA-A-AAGAAAAAAAACAGTAATGCTTAATGCTGCTTTTAATCTCTTTG-TTTTTTTTTCTCTTTTTGATTTTTCTTTGGTTGGTGCCAAATCGAGAAATGCTAAGAAGAAATTTGTTTGGGATTGGAAGAACACTTGGATCATATAGTTAGTAGTTGTAGTGAGTGGAAATATTGGTAGCTATGAGTAGCTTTGTGATGGATGGATGGATGGATGTTTTTTGGTTAGTTTTTTTTTCCCCATTTTGGGGGGTGACTGGTTAATGTGGTGCCTATTGAATTGTGGATATAATTAATTAGTATCTTGGTATATTTGAAA]
[+] EMBL AK068007 [TCGCATCTCCCCCGCTTCCTCTCCTCCGCCGCCCCAAAACCCTAGCGGCGAGCGAGCGAGCGAGCCATCCATCACCCATGGCCCGCAAGCGCCGCGCGCCGACGCCCCCGCCCCCGCCGCCGCCGCCTCCCGAGGCCGAGTCCTCCGCGGATTCAAGCGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGTCTCCCGTCGCCCCACCGCCCCAGAAGCCCAGCGGCCGCGGCGCCGCCTCGTCGGATGAGGAGGAGGAGGAGGGGGAGGACTCCGACACTGACACCTACGCCCAAGGTTTCCAGCTTCGGAAGGTTGGCGGCGGCGACGAGGAAGGGGAGGAGGTGGAAGGCGACTCGTCGGAGTCGGAGCCGGAGCCGGAGCCCGTCAAGAAGGAGTCGGCGAAGAAGGCCAAAGCCGAGGCCAAGAAGAAGAGGGCCGCGCCTGAGCCCGCGCCGTCGGGCAAGGCCAAGAAGGCCAAGCCGGAGAAGTCGTCGTCGGCGGCGGCGCCTGAGCCCGCTCCCTCCTCGGGCAAGTCCAAGAAGGCAGCCAAGGCTGAGGCTGCGAAAGCGGCTGCCGCTGAGCCGGCTCCTTCTACCGGCAAGGTGAGCAAGTGTTCTCTTCAGCACACTCCCACTGTGGGAGTCCCACAAAACCCCCCCTCCTCTCCTCCTCTGGCTCCCTCTGCCACCCAGCCACCACAGGATGGCATCCTCCTCCTCACCTCCACTCCTCCTCCTCGTCTCCCTCCTCGCCGCCGTCGCCGCCGCCTTCCTCGCGGCGCAAGCTCTCGCCCAACACCAACCCCAAGGAAATGATACGGCGGCGGCGGGGGAGGGGTGGAGGCCGAGGCTGAGGAAGACGTACGTGGAGGGCGGCGCCGCCGGGATGGTGCCGCGGCGGCGGAGGCTGGTGGGGAGGTTCCAGATATGCGCGGTGTGCACCTGCTGCGGGGGCCCGCACGGGGTGTGCATCCCGGCGCCCTGCTGCTACGCCATCAACTGCAACATCCCGAACCGCCCCTTCGGCGTCTGCTCCTTCACCCCGCGAACCTGCAACTGCCTCAACTGCCACCTCTAGCAGATATGCAGCACAGCACATCAGCCA AGAAAATCAGGCA AGA AACCCCAAGTA A AAGAAAAAAAACAGTAATGCTTAATGCTGCTTTTAATCTCTTTGTTTTTTTTTTCTCTTTTTGATTTTTCTTTGGTTGGTGCCAAATCGAGAAATGCTAAGAAGAAATTTGTTTGGGATTGGAAGAACACTTGGATCATATAGTTAGTAGTTGTAGTGAGTGGAAATATTGGTAGCTATGAGTAGCTTTGTGATGGATGGATGGATGGATGTTTTTTGGTTAGTTTTTTTTTCCCCATTTTGGGGGGTGACTGGTTAATGTGGTGCCTATTGAATTGTGGATATAATTAATTAGTATCTTGGTATATTTGA ]
[+] EMBL AK065785 [ TCTTCAGCACACTCCCACTGTGGGAGTCCCACAAAACCCCCCCTCCTCTCCTCCTCTGGCTCCCTCTGCCACCCAGCCACCACAGGATGGCATCCTCCTCCTCACCTCCACTCCTCCTCCTCGTCTCCCTCCTCGCCGCCGTCGCCGCCGCCTTCCTCGCGGCGCAAGCTCTCGCCCAACACCAACCCCAAGGAAATGATACGGCGGCGGCGGGGGAGGGGTGGAGGCCGAGGCTGAGGAAGACGTACGTGGAGGGCGGCGCCGCCGGGATGGTGCCGCGGCGGCGGAGGCTGGTGGGGAGGTTCCAGATATGCGCGGTGTGCACCTGCTGCGGGGGCCCGCACGGGGTGTGCATCCCGGCGCCCTGCTGCTACGCCATCAACTGCAACATCCCGAACCGCCCCTTCGGCGTCTGCTCCTTCACCCCGCGAACCTGCAACTGCCTCAACTGCCACCTCTAGCAGATATGCAGCACAGCACATCAGCCA AGAAAATCAGGCA AGA AACCCCAAGTA A AAGAAAAAAAACAGTAATGCTTAATGCTGCTTTTAATCTCTTTG TTTTTTTTTCTCTTTTTGATTTTTCTTTGGTTGGTGCCAAATCGAGAAATGCTAAGAAGAAATTTGTTTGGGATTGGAAGAACACTTGGATCATATAGTTAGTAGTTGTAGTGAGTGGAAATATTGGTAGCTATGAGTAGCTTTGTGATGGATGGATGGATGGATGTTTTTTGGTTAGTTTTTTTTTCCCCATTTTGGGGGGTGACTGGTTAATGTGGTGCCTATTGAATTGTGGATATAATTAATTA ]
[+] EMBL BI806811 [ ACCTCTAGCAGATATGCAGCACAGCACATCAGCCANAGAAAATCAGGCATAGATAACCCCCAGTATATAAGAAAAAAAACAGTAATGCTTAATGCTGCTTTTAATCTCTTTG TTTTTTTTTCTCTTTTTGATTTTTCTTTGGTTGGTGCCNAATCGAGAAATGCTAAGAAGAAATTTGTTTGGGATTGGAAGAACACTTGGATCATATAGTTAGTAGTTGTAGTGAGTGGAAATATTGGTAGCTATGAGTAGCTTTGTGATGGATGGATGGATGGATGTTTTTTGGTTAGTTTTTTTTTCCCCATTTTGGGGGGTGACTGGTTAATGTGGTGCCTATTGAATTGTGGATATAATTAATTAGTATCTTGGTAaaaaaaaaa]
consensusID : consensus_13751#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 508 fasta sequence
[CTCAACCGAGACCGCGCCGGAGCTGGGGAGCTTCCAGCTCTGCGCCCCATGCACCTGCTGCGCGCCCGGAGCGGAGGATCCAGGGGCGCGGATGCATCCTCTCCCCGTGCTGCTACGCCATCAACTGCAACATCCCC-ACCGCCCCTTCGGCTTCTGCTCCT-TCACC-CCCAAGTC-CTGCGACTGCCTCGGCTGCAAC-CTCTAAGAAAAAGGTGCTCCTCATCATCTGCTTCT-TGGCTTCTTGCGATGAATTTGTTGAGAGTGATGAGAATTTGAAGATGAGAGGAGTATCGTTTAAATATTGCGA-GTGATAGCGAAAGTA-GTAGAGAGTGAGAGA-GTGGGGGTAGGAGAAAAGGGATATATGTCTCCCCCGCTAATGCTTAGTTTAAGTGA-C-ATTGTTACTGTTTCTAGCTATTTTCTTCTTGTGATCATTGTTATATGGTGTATTGGTGTAGTTGCTACCATGAAATTGGTTAAGGAAAAAATGGGTGATTTGGAAAAAAGGTAAAAA]
[+] EMBL BI804698 [CTCAACCGAGACCGCGCCGGAGCTGGGGAGCTTCCAGCTCTGCGCCCCATGCACCTGCTGCGCGCCCGGAGCGGAGGATCCAGGGGCGCGGATGCATCCTCTCCCCGTGCTGCTACGCCATCAACTGCAACATCCCC ACCGCCCCTTCGGCTTCTGCTCCT TCACC CCC AGTC CTGCGACTGCCTCGGCTGCAAC CTCTAAGAAAAAGGTGCTCCTCATCATCTGCTTCT TGGCTTCTTGCGATGAATTTGTTGAGAGTGATGAGAATTTGAAGATGAGAGGAGTATCGTTTAAATATTGCGA GTGATAGCGAAAGTA GTAGAGAGTGAGAGA GTGGGGGTAGGAGAAAAGGGATATATGTCTCCCCCGCTAATGCTTAGTTTAAGTGA C ATTGTTACTGTTTCTAGCTATTTTCTTCTTGTGATCATTGTTATATGGTGTATTGGTGTAGTTGCTACCATGAAATTGGTTAAGGAAAAAATGGGTGATTTGGAAAAAA ]
[+] EMBL BI803699 [ TTCCAGCTCTGCG CCCATGCACCTGCTGCGCG CGGAGCGGAGGATCCA GGGCGCGGATGCATCCTCTCCCCGTGCTGCTACGCCATCAACTGCAACATCCCCAACCGCCCCTTCGGCTTCTGCTCCT TCACC CCCAAGTC CTGCGACTGCCTCGGCTGCAAC CTCTAAGAAAAAGGTGCTCCTCATCATCTGCTTCT TGGCTTCTTGCGATGAATTTGTTGAGAGTGATGAGAATTTGAAGATGAGAGGAGTATCGTTTAAATATTGCGACGTGATAGCGAAAGTA GTAGAGAGTGAGAGA GTGGGGGTAGGAGAAAAGGGATATATGTCTCCCCCGCTAATGCTTAGTTTAAGTGACC ATTGTTACTGTTTCTAGCTATTTTCTTCTTGTGATCATTGTTATATGGTGTATTGCCGTAGTTGCTACCATGAAATTGGTTAAAAAAAAA ]
[+] EMBL BI802859 [ TTCGGCTTCTGCTCCTGTCACCACCCAAGTCACTGCGACTGCCTCGGCTGCAACACTCTAAG AAAAGGTGCTCCTCATCATCTGCTTCTGTGGCTTCTTGCGATGAATTTGTTGAGAGTGATGAGAATTTGAAGATGAGAGGAGTATCGTTTAAATATTGCGA GTGATAGCGAAAGTACCTAGAGAGTGAGAGACGTGGGGGTAGGAGAAAAGGGATATATGTCTCCCCCGCTAATGCTTAGTTTAAGTGA CAATTGTTACTGTTTCTAGCTATTTTCTTCTTGTGATCATTGTTATATGGTGTATTGGTGTAGTTGCTACAATGAAATTGGTTAAGG AAAATGGGTGATTTGGAGATTTGGTAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13751#0 CATTCGCATTCGCATCTCCCCCGCTTCCTCTCCTCCGCCGCCCCAAAACCCTAGCGGCGA 60
consensus_13751#1 ---------TCGCATCTCCCCCGCTTCCTCTCCTCCGCCGCCCCAAAACCCTAGCGGCGA 51
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 GCGAGCGAGCGAGCCATCCATCACCCATGGCCCGCAAGCGCCGCGCGCCGACGCCCCCGC 120
consensus_13751#1 GCGAGCGAGCGAGCCATCCATCACCCATGGCCCGCAAGCGCCGCGCGCCGACGCCCCCGC 111
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 ACCCGCCGCCGCCGCCTCCCGAGGCCGAGTCCTCCGCGGATTCAAGCGGCGAGGAGGAGG 180
consensus_13751#1 CCCCGCCGCCGCCGCCTCCCGAGGCCGAGTCCTCCGCGGATTCAAGCGGCGAGGAGGAGG 171
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 AGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGTCTCCCGTCGCCCCACCGCCCCAGAAGC 240
consensus_13751#1 AGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGTCTCCCGTCGCCCCACCGCCCCAGAAGC 231
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CCAGCGGCCGCGGCGCCGCCTCGTCGGATGAGGAGGAGGAGGAGGAGGAGGACTCCGACA 300
consensus_13751#1 CCAGCGGCCGCGGCGCCGCCTCGTCGGATGAGGAGGAGGAGGAGGGGGAGGACTCCGACA 291
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CTGACACCTACGCCCAAGGTTTCCAGCTTCGGAAGGTTGGCGGCGGCGACGAGGAAGGGG 360
consensus_13751#1 CTGACACCTACGCCCAAGGTTTCCAGCTTCGGAAGGTTGGCGGCGGCGACGAGGAAGGGG 351
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 AGGAGGTGGAAGGCGACTCGTCGGAGTCGGAGCCGGAGCCGGAGCCCGTCAAGAAGGAGT 420
consensus_13751#1 AGGAGGTGGAAGGCGACTCGTCGGAGTCGGAGCCGGAGCCGGAGCCCGTCAAGAAGGAGT 411
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CGGCGAAGAAGGCCAAAGCCGAGGCCAAGAAGAAGAGGGCCGCGCCTGAGCCCGCGCCGT 480
consensus_13751#1 CGGCGAAGAAGGCCAAAGCCGAGGCCAAGAAGAAGAGGGCCGCGCCTGAGCCCGCGCCGT 471
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CGGGCAAGGCCAAGAAGGCCAAGCCGGAGAAGTCGTCGTCGGCGGCGGCGCCTGAGCCCG 540
consensus_13751#1 CGGGCAAGGCCAAGAAGGCCAAGCCGGAGAAGTCGTCGTCGGCGGCGGCGCCTGAGCCCG 531
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CTCCCTCCTCGGGCAAGTCCAAGAAGGCAGCCAAGGCTGAGGCTGCGAAAGCGGCTGCCG 600
consensus_13751#1 CTCCCTCCTCGGGCAAGTCCAAGAAGGCAGCCAAGGCTGAGGCTGCGAAAGCGGCTGCCG 591
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CTGAGCCGGCTCCTTCTACCGGCAAGGTGAGCAAGTACAATTTGGCGCCGGAGCCCTCGC 660
consensus_13751#1 CTGAGCCGGCTCCTTCTACCGGCAAGGTGAGCAAGTG----TTCTCTTCAGCACACTC-C 646
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CGTCAAGCAAGTCTGGGAAGGCCCTATCGCGATGGACGACGGATGACGAGGTCAAGATTC 720
consensus_13751#1 CACTGTGGGAGTCCCACAAAACCCCCCC------------------------------TC 676
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 TTGAGGTCCTCGTGGCCCATTTCAAGAGCCACGGCACTCAGCTTAAAGTTGAGGGGATCA 780
consensus_13751#1 CTCTCCTCCTC-TGGCTCCCTCT---------GCCACCCAGCCACCACAGGATGGCATCC 726
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 TCGCTGCTGTCGGCGATAGCCTCGAGAGGAAGAGCATCAAGTATTCGGACATGTATGAGA 840
consensus_13751#1 TC-CTCCTCACCTCCACTCCTCCTCCTCGTCTCCCTCCTCGCCGCCG---TCGCCGCCGC 782
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 AGGTGCGGAGGCTCAAGCAGCGGTACGAGGCCACTGCCAAGAAAGTTGAACACGGCGGCG 900
consensus_13751#1 CTTCCTCGCGGCGCAAGCTCTCGCCCAACACCAACCCCAAGGAAAT--GATACGGCGGCG 840
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 ACCTACCAGCTAAAGAGGATGACCTGCGGATGTATCAGCTATCGTCGGAAATCTGGGGAA 960
consensus_13751#1 GC-----------GGGGGAGGGGTGGAGGCCGAGGCTGAGGAAGACGTACGTGGAGGGCG 889
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 AGAACGCAAAGGATGCTGGCAATTCGTCAAAGAACAAGAAGGGGCAAGCTAAGAAAGATA 1020
consensus_13751#1 GCGCCGCCG-GGATGGTGCCGCGGCGGCGGAGGCT--GGTGGGGAGGTTCCAGATATGCG 946
consensus_13751#2 -CTCAACCG-AGACCGCGCCGGAGCTGGGGAGCTTCCAGCTCTGCGCCCC---ATGCACC 55
* ** * * * ** * *
consensus_13751#0 AGGTGAGTGGAGATTCAAAGGAAGCCGCCAAGGAAGATAAGGTGGATGAAGCCGCCATTG 1080
consensus_13751#1 CGGTG--TGCACCTGCTGCGGGGGCCCGCACGG--GGTGTGCATCCCGGCGCC-CTGCTG 1001
consensus_13751#2 TGCTG--CGCGCCCGGAGCGGAGGATCCAGGGGCGCGGATGCATCCTCTCCCC-GTGCTG 112
* ** * ** * ** * ** **
consensus_13751#0 CTGTGAATGAAAAGGGTGGTACTCTGGCAGAGAATAAGAAGGGGAAAACCAACAAGCAGA 1140
consensus_13751#1 CTACGC-CATCAACTGCAACATCCCGAACCGCCCCTTCGGCGTCTGCTCCTTCACCCCGC 1060
consensus_13751#2 CTACGC-CATCAACTGCAACATCCCCA-CCGCCCCTTCGGCTTCTGCTCCTTCACCCCCA 170
** * ** * * * ** ** *
consensus_13751#0 AAACAGGTATGGAAACAAAGGTTGGATCATCTAAGGAGGCTGCTCTTGCTGCTAGTCCAA 1200
consensus_13751#1 GAACC--TGCAACTGCCTCAACTG--CCACCTCTAGCAGATATGCAGCACAGCACATCAG 1116
consensus_13751#2 AGTCC--TGCGACTGCCTCGGCTGCAACCTCTAAGAAAAAGGTGCTCCTCATCATCTGCT 228
* * * ** * ** * *
consensus_13751#0 CCAAGGGTAAGAAGAAGGGAAGCCACAAAGACAAATTGGATGAAGAAGCAAAGAGTGGCA 1260
consensus_13751#1 CCAAGAA-AATCAGGCAAGAAACCCCAA--GTAAAAGAAAAAAAACAGTAATGCTTAATG 1173
consensus_13751#2 TCTTGGCTTCTTGCGATGAATTTGTTGAGAGTGATGAGAATTTGAAGATGA-GAGGAGTA 287
* * * * * * * *
consensus_13751#0 CGGCAAAGGTGACCTCCACAATTGCCACTGATGATGATGATGGAACTTTGGGTGGGAGTA 1320
consensus_13751#1 CTGCTTT--TAATCTCTTTG-TTTTTTTTTCTCTTTTTGATTTTTCTTTGGTTGGTGCCA 1230
consensus_13751#2 TCGTT----TAAATATTGCGAGTGATAGCGAAAGTAGTAGAGAGTGAGAGAGTGGGGGTA 343
* * * * * * * *** *
consensus_13751#0 AGAGGGAGAAGGCTGGCAAAGAGGAATTGGATGGGGACACACATATCGTCATGCCAAAGG 1380
consensus_13751#1 AATCGAGAAATGCT---AAGAAGAAATTTGTTTGGGATTGGAAGAACACTTGGATCATAT 1287
consensus_13751#2 G---GAGAAA-------AGGGATATATGTCTCCCCCGCTAATGCTTAGTTTAAGTGACAT 393
* ** * * ** *
consensus_13751#0 AGGCCACCACAACTGCCGCTAGCGATGATGGTACTTTGGTTGGGAGTAAGAAGGGGAAGG 1440
consensus_13751#1 AGTTAGTAGTTGTAGTGAGTGGAAATATTGGTA-----GCTATGAGTAGCTTTGTGATGG 1342
consensus_13751#2 TGTTACTGTTTCTAGCTATTTTCT-TCTTGTGATCATTGTTATATGGTGTATTGGTGTAG 452
* * * * ** * * * * * *
consensus_13751#0 CTGACAATGGGAAATTGGATGGCGACACACACAGTGTTATGCCAAAGGAGGCCACCGCTG 1500
consensus_13751#1 ATGG--ATGGATGGATGTTTTTTGGT-TAGTTTTTTTTTCCCCATTTTGGGGGGTGACTG 1399
consensus_13751#2 TTGCTACCATGAAATTGGTTAAGGAAAAAATGGGTGATTTGGAAAAAAGGTAAAAA---- 508
** ** * * * * * * *
consensus_13751#0 GCACCCAAAATGGTGGCATCCTAACAGGAGGGGAAAATCACAAAGAAAAAGTAGATAAAG 1560
consensus_13751#1 GT---TAATGTGGTGCC-TATTGAATTGTGGATATAATT--AATTAGTATCTTGGTATAT 1453
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 ATGCTAATGTACCAAGCATACGGAGGGAGTATGCTGAATTGCAGAGTTTGTATCCCAACC 1620
consensus_13751#1 TTGAAA------------------------------------------------------ 1459
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 TTGCTTCCTTTGTGAACGGAATTGAGGCCCAGCATCCATGTGGATCAACCTTCAAGAGAG 1680
consensus_13751#1 ------------------------------------------------------------
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CTTTTGAGTTCATTAGTGATGATAAGGCTTGCACCCTGGAATCCAAGATCAAGAAGCAGA 1740
consensus_13751#1 ------------------------------------------------------------
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 AGATAGCGGAAGTGAGAATGCAGCTCCGTCTAGCAGACACGAAGAAGGAAGTAGCCAATG 1800
consensus_13751#1 ------------------------------------------------------------
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CTTTGTTAGGATTGCTGGACTAAAACATTGCGGTGCTGACATCCTTTTTGTGCGATGGTT 1860
consensus_13751#1 ------------------------------------------------------------
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 GTATTGAAGATTCAAGTTGCAGAAGATTTTTGGCTTGTGGAGCTAAGGGATATGACGTGA 1920
consensus_13751#1 ------------------------------------------------------------
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CGAGTTGAGCTACTGGGTTTTCTGTCTCTGGTTCTCGAGAGCTATTCTGTGAACGGTTGT 1980
consensus_13751#1 ------------------------------------------------------------
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 TTATGTGATTAGATGGTAGTATCCCTTTAATCTATGAGTTAGCAATGGAGCTGATGACAG 2040
consensus_13751#1 ------------------------------------------------------------
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 TTTAATTAACTCCTGTATCTATGATGGCATTTGGCTTTAATTAGGAGGTGTGCCTAATTA 2100
consensus_13751#1 ------------------------------------------------------------
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 AGGGGGTTCTATAAATTTGGGATATGCGTGATGCTGATATTGACCCGAAATCCCGTAATC 2160
consensus_13751#1 ------------------------------------------------------------
consensus_13751#2 ------------------------------------------------------------
consensus_13751#0 CTGCTTATTTTGTTGCCCGGTTTAAAAAAAAA 2192
consensus_13751#1 --------------------------------
consensus_13751#2 --------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||