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Oryza sativa
cluster # 13756 cluster # 13756       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13756#0 length = 1245 sequences # 10  
consensus_13756#1 length = 612 sequences # 4  

consensusID : consensus_13756#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1245
fasta sequence
                              [TCCTGAGCCTCACAAAATTTGGTTGGTCAGAGTTGCATCCCGGCCACTGGCCAGCCACGACGACGAAGCGGCGAGAAGCCGAGGCCAAACTACAATTCAACACCTCTTCCTCTTCTTCTTCTTGCTG---CTTCTTCTTCTTCTTCTGCCACTTGGTTGCTATATACACCAAGCTCGATCACGAAACTATCTTAGCTGCTGCTGCTGCTGCTGCGTTGGAGAAGAAGAGAGTGGCAGGGTGAGGATGGCCGGGGTGCAGGTGATGCCGGCGGTGGGGGCGGTGGCGACGGCGGAAGGGAGCTGCAGGGCGGCGGGGCAGAGGAGGGGCCGCGGCGTGAGCAGCTTGTTCGCCGGAGACTGGAGGCGGCGGCCTCGCCGG-GCGGCGTGCACGGCCAGGGTCAGGGGCAGGAGGCAGCAGCAGCAGCAGCAGGGCC-TCGCCGTCGTCTGCAACCTCGGTGGCACCTACGATGAAGGTTTCGAGGACATCCACGTGCAACT-GATTAATGTGTTCACCTACAAAGCCGTCAAGACCGTGCTCACGCAGCTCTACGAAATGAACCCACCAAGCTACCGATGGTTATACAACTTCGTTGCTGTAAACAAGCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGA-GAGGATATCTGACGAGAACC-TGGCGTTG-ATGCGAGAGCGGCTCATGGAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCA-GGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTT-AGTTTGGTCATTTGGTGAGTGAAGTGAAGAAGCTGCAAACTG-TTTGGTCCATTTCATCGACAGTGTACAAGTACAACGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAGTTACAACTCTTGCTGTTGGTTTTAGAGAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK060962             [TCCTGAGCCTCACAAAATTTGGTTGGTCAGAGTTGCATCCCGGCCACTGGCCAGCCACGACGACGAAGCGGCGAGAAGCCGAGGCCAAACTACAATTCAACACCTCTTCCTCTTCTTCTTCTTGCTGCTTCTTCTTCTTCTTCTTCTGCCACTTGGTTGCTATATACACCAAGCTCGATCACGAAACTATCTTAGCTGCTGCTGCTGCTGCTGCGTTGGAGAAGAAGAGAGTGGCAGGGTGAGGATGGCCGGGGTGCAGGTGATGCCGGCGGTGGGGGCGGTGGCGACGGCGGAAGGGAGCTGCAGGGCGGCGGGGCAGAGGAGGGGCCGCGGCGTGAGCAGCTTGTTCGCCGGAGACTGGAGGCGGCGGCCTCGCCGG GCGGCGTGCACGGCCAGGGTCAGGGGCAGGAGGCAGCAGCAGCAGCAGCAGGGCC TCGCCGTCGTCTGCAACCTCGGTGGCACCTACGATGAAGGTTTCGAGGACATCCACGTGCAACT GATTAATGTGTTCACCTACAAAGCCGTCAAGACCGTGCTCACGCAGCTCTACGAAATGAACCCACCAAGCTACCGATGGTTATACAACTTCGTTGCTGTAAACAAGCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGA GAGGATATCTGACGAGAACC TGGCGTTG ATGCGAGAGCGGCTCATGGAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCA GGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTT AGTTTGGTCATTTGGTGAGTGAAGTGAAGAAGCTGCAAACTG TTTGGTCCATTTCATCGACAGTGTACAAGTACAACGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAG                                               ]
[+] EMBL AK070287             [                                                                                                   ACACCTCTTCCTCTTCTTCTTCTTGCTG   CTTCTTCTTCTTCTTCTGCCACTTGGTTGCTATATACACCAAGCTCGATCACGAAACTATCTTAGCTGCTGCTGCTGCTGCTGCGTTGGAGAAGAAGAGAGTGGCAGGGTGAGGATGGCCGGGGTGCAGGTGATGCCGGCGGTGGGGGCGGTGGCGACGGCGGAAGGGAGCTGCAGGGCGGCGGGGCAGAGGAGGGGCCGCGGCGTGAGCAGCTTGTTCGCCGGAGACTGGAGGCGGCGGCCTCGCCGG GCGGCGTGCACGGCCAGGGTCAGGGGCAGGAGGCAGCAGCAGCAGCAGCAGGGCC TCGCCGTCGTCTGCAACCTCGGTGGCACCTACGATGAAGGTTTCGAGGACATCCACGTGCAACT GATTAATGTGTTCACCTACAAAGCCGTCAAGACCGTGCTCACGCAGCTCTACGAAATGAACCCACCAAGCTACCGATGGTTATACAACTTCGTTGCTGTAAACAAGCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGA GAGGATATCTGACGAGAACC TGGCGTTG ATGCGAGAGCGGCTCATGGAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATATATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCA GGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTT                                                                                                                                                                                        ]
[+] EMBL AU056317             [                                                                                                                   TTCTTCTTGCTG   CTTCTTCTTCTTCTTCTGCCACTTGGTTGCTATATACACCAAGCTCGATCACGAAACTATCTTAGCTGCTGCTGCTGCTGCTGCGTTGGAGAAGAAGAGAGTGGCAGGGTGAGGATGGCCGGGGTGCAGGTGATGCCGGCGGTGGGGGCGGTGGCGACGGCGGAAGGGAGCTGCAGGGCGGCGGGGCAGAGGAGGGGCCGCGGCGTGAGCAGCTTGTTCGCCGGAGACTGGAGGCGGCGGCCTCGCCGGNGCGGCGTGCACGGCCAGGGTCAGGGGCAGGAGGCAGCAGCAGCAGCAGCAGGGCCTTCGCCGTCGTCTGCAACCTCGGTGGCACCTACGATGAAGGTTTCGAGGACATCCACGTGCAACTGGATTAATGTGTTCACCTACAAAGCCGTCAAGACCGTGCTCACGCAGCTCTACGAAATGAACCCACCAAGCTACCGATGGTTATACAACTTCGTTGCTGTAAACAAGCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCANTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGAGGAGGATATCTGACGATAACCTTGGCGTTGAATGCGAGAGCGGCTCATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB648493             [                                                                                                                                                                                                                                        GGCAGGGTGAGGATGGCCGGGGTGCAGGTGATGCCGGCGGTGGGGGCGGTGGCGACGGCGGAAGGGAGCTGCAGGGCGGCGGGGCAGAGGAGGGGCCGCGGCGTGAGCAGCTTGTTCGCCGGAGACTGGAGGCGGCGGCCTCGCCGG GCGGCGTGCACGGCCAGGGTCAGGGGCAGGAGGCAGCAGCAGCAGCAGCAGGGCC TCGCCGTCGTCTGCAACCTCGGTGGCACCTACGATGAAGGTTTCGAGGACATCCACGTGCAACT GATTAATGTGTTCACCTACAAAGCCGTCAAGACCGTGCTCACGCAGCTCTACGAAATGAACCCACCAAGCTACCGATGGTTATACAACTTCGTTGCTGTAAACAAGCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGA GAGGATATCTGACGAGAACC TGGCGTTG ATGCGAGAGCGGCTCATGGAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATTAAGTGTACAATTAATGTACCTAGCCAGTGTAATGGGTACTAAT                                                                                                                                                                                                                                                ]
[-] EMBL CB648494             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGACATCCACGTGCAACT GATTAATGTGTTCACCTACAAAGCCGTCAAGACCGTGCTCACGCAGCTCTACGAAATGAACCCACCAAGCTACCGATGGTTATACAACTTCGTTGCTGTAAACAAGCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGA GAGGATATCTGACGAGAACC TGGCGTTG ATGCGAGAGCGGCTCATGGAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCA GGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTT AGTTTGGTCATTTGGTGAGTGAAGTGAAGAAGCTGCAAACTG TTTGGTCCATTTCATCGACAGTGTACAAGTACAACGTAGCAACTAATACTTGTAATTTGGGTGAAGTTCGTCGACACAGTTTATTTCATGAGTTACAAaaaaaggga                                ]
[+] EMBL OSS15852A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCAAGACCGTGCTCACGCAGCTCTACGAAATGAACCCACCAAGCTACCGATGGTTATACAACTTCGTTGCTGTAAACAAGCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTNATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGA GAGGATATCTGACGAGAACC TGGCGTTG ATGCGAGA CGGCTCATGGAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGNATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGGGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGNATATTAAGNGTCCAATTAATGT CCCAGCCAGTTTA                                                                                                                                                                                                                                                            ]
[+] EMBL AU174091             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCGTTGCTGTAAACNAGCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGA GAGGATATCTGACGAGAACC TGGCGTTG ATGCGAGAGCGGCTCATGGAGACGGTCATNTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTNTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATTAAGTGTACAATTAATGTACCNAGCCAGTGTAATGGGTACAAATTCAAGAaaaaa                                                                                                                                                                                                                                     ]
[+] EMBL CF311179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGA GAGGATATCTGACGAGAACC TGGCGTTG ATGCGAGAGCGGCTCATGGAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCAGGGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTTAATTTTGGTCATTTGGTGAGTGAAGTGAAGAAGCTGCAAACTGTTTTGGTCCATTTCATCGACAGTGTACAAGTACAACGTAGC                                                                                                   ]
[-] EMBL CF311180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAAATAATGCCTGATCTGTTTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTTTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCA GGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTT AGTTTGGTCATTTGGTGAGTGAAGTGAAGAAGCTGCAAACTG TTTGGTCCATTTCATCGACAGTGTACAAGTACAACGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAGTTACAACTCTTGCTGTTGGTTTTAGAGAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU056318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCGAGTCCGATGTATATGTATGTATATTAAGTGTACNATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCA GGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTT AGTTTGGTCATTTGGTGAGTGAAGTGAAGAAGCTGCAAACTG TTTGGTCCATTTCATCGACAGTGTACAAGTACAACGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAGTTACAACTCTTGCTGTTGGTTCTAAAAAA                  ]


>consensus_13756#0 TCCTGAGCCTCACAAAATTTGGTTGGTCAGAGTTGCATCCCGGCCACTGGCCAGCCACGA CGACGAAGCGGCGAGAAGCCGAGGCCAAACTACAATTCAACACCTCTTCCTCTTCTTCTT CTTGCTGCTTCTTCTTCTTCTTCTGCCACTTGGTTGCTATATACACCAAGCTCGATCACG AAACTATCTTAGCTGCTGCTGCTGCTGCTGCGTTGGAGAAGAAGAGAGTGGCAGGGTGAG GATGGCCGGGGTGCAGGTGATGCCGGCGGTGGGGGCGGTGGCGACGGCGGAAGGGAGCTG CAGGGCGGCGGGGCAGAGGAGGGGCCGCGGCGTGAGCAGCTTGTTCGCCGGAGACTGGAG GCGGCGGCCTCGCCGGGCGGCGTGCACGGCCAGGGTCAGGGGCAGGAGGCAGCAGCAGCA GCAGCAGGGCCTCGCCGTCGTCTGCAACCTCGGTGGCACCTACGATGAAGGTTTCGAGGA CATCCACGTGCAACTGATTAATGTGTTCACCTACAAAGCCGTCAAGACCGTGCTCACGCA GCTCTACGAAATGAACCCACCAAGCTACCGATGGTTATACAACTTCGTTGCTGTAAACAA GCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGA GCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGC GATGATGTACGAGAGGATATCTGACGAGAACCTGGCGTTGATGCGAGAGCGGCTCATGGA GACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCC TGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAG CTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGT ATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATT CAGGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTTAGTTTGGTCATTTGGT GAGTGAAGTGAAGAAGCTGCAAACTGTTTGGTCCATTTCATCGACAGTGTACAAGTACAA CGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAGTT ACAACTCTTGCTGTTGGTTTTAGAGAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13756#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 612
fasta sequence
                              [GAGTAGAAAACTGGAGCACGAGGACACTGACATGGACTAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGAGAGGATATCTGACGAGAACCTGGCGTTGATGCGAGAGCGGCTCATGGAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATT-AAGTGTACAATTAA-TGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCAGGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTTAGTTTGGT-CATTTGGTGAGTGAAGTGAAGAAGCTGCAAACTGTTTGGTCCATTTCATCGACAGTGTACAAGTACA-ACGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAGTTACAACTCTTG]

[+] EMBL CF309666             [GAGTAGAAAACTGGAGCACGAGGACACTGACATGGACTAAAGGAGAAGCAGGAGCTTGCAGAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGCGATGATGTACGAGAGGATATCTGACGAGAACCTGGCGTTGATGCGAGAGCGGCTCATGGAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAGCTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATT AAGTGTACAATTAA TGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCAGGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTTAGTTTGGT CATTTGGTGAGTGAAGTGAAGAAGCTGCAAACTGTTTGGTCCATTTCATCGACAGTGTACAAGTACA ACGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAGTTACAACTCTTG]
[+] EMBL CB684320             [                                                                                                                                                                                                                                                                                                                                  AAATTACTCCTGCTCGATCGAGTCCGATGTATATGTATGTATATT AAGTGTACAATTAA TGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATTCAGGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTTAGTTTGGT CATTTGGTGAGTGAAGTGAAGAAGCTGCAAACTGTTTGGTCCATTTCATCGACAGTGTACAAGTACA ACGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAG            ]
[-] EMBL OS38071              [                                                                                                                                                                                                                                                                                                                                                                ATATGTCTGTATATTCAAGTGTACAATTAACTGTACCCAGCCAGTGTAATGGGTATAAATTCAAGATGCATTCAGGGTTAAGTATAGATTCAGATCTAGCTGATAGCGTGTGGTTTAGTTTGGTCCATTTGGTGAGTGAAGTGAAGAAGCTGTAAACTGTTTGGTCCATTTCATCGACAGTGTACAAGTACATTCGTAGTAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAGTTACAACTCTT ]
[+] EMBL BI805068             [                                                                                                                                                                                                                                                                                                                                                                                 ccgGTACAATTAA TGTACC AGCCAGTGTAATGGGTAC AATTC AGATGCATTCAGGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTTAGTTTGGT CATTTGGTGAGTGAAGTGAAGAAGCTGC AACTGTTTGGTCCATTTCATCGACAGTGTAC AGTAC  ACGTAGCAACTAATACTTGTAATTTGGGTC AGTTCGTCGACAC GTTTATTTCATGAGTTACAAaaa   ]


>consensus_13756#1 GAGTAGAAAACTGGAGCACGAGGACACTGACATGGACTAAAGGAGAAGCAGGAGCTTGCA GAGCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCAT GCGATGATGTACGAGAGGATATCTGACGAGAACCTGGCGTTGATGCGAGAGCGGCTCATG GAGACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATG CCTGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTT AGCTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTAT GTATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCA TTCAGGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTTAGTTTGGTCATTTG GTGAGTGAAGTGAAGAAGCTGCAAACTGTTTGGTCCATTTCATCGACAGTGTACAAGTAC AACGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAG TTACAACTCTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13756#0      TCCTGAGCCTCACAAAATTTGGTTGGTCAGAGTTGCATCCCGGCCACTGGCCAGCCACGA 60
consensus_13756#1      ------------------------------------------------------------
                                                                                   

consensus_13756#0      CGACGAAGCGGCGAGAAGCCGAGGCCAAACTACAATTCAACACCTCTTCCTCTTCTTCTT 120
consensus_13756#1      ------------------------------------------------------------
                                                                                   

consensus_13756#0      CTTGCTGCTTCTTCTTCTTCTTCTGCCACTTGGTTGCTATATACACCAAGCTCGATCACG 180
consensus_13756#1      ------------------------------------------------------------
                                                                                   

consensus_13756#0      AAACTATCTTAGCTGCTGCTGCTGCTGCTGCGTTGGAGAAGAAGAGAGTGGCAGGGTGAG 240
consensus_13756#1      ------------------------------------------------------------
                                                                                   

consensus_13756#0      GATGGCCGGGGTGCAGGTGATGCCGGCGGTGGGGGCGGTGGCGACGGCGGAAGGGAGCTG 300
consensus_13756#1      ------------------------------------------------------------
                                                                                   

consensus_13756#0      CAGGGCGGCGGGGCAGAGGAGGGGCCGCGGCGTGAGCAGCTTGTTCGCCGGAGACTGGAG 360
consensus_13756#1      ------------------------------------------------------------
                                                                                   

consensus_13756#0      GCGGCGGCCTCGCCGGGCGGCGTGCACGGCCAGGGTCAGGGGCAGGAGGCAGCAGCAGCA 420
consensus_13756#1      ------------------------------------------------------------
                                                                                   

consensus_13756#0      GCAGCAGGGCCTCGCCGTCGTCTGCAACCTCGGTGGCACCTACGATGAAGGTTTCGAGGA 480
consensus_13756#1      ------------------------------------------------------------
                                                                                   

consensus_13756#0      CATCCACGTGCAACTGATTAATGTGTTCACCTACAAAGCCGTCAAGACCGTGCTCACGCA 540
consensus_13756#1      ------------------------------------------------------------
                                                                                   

consensus_13756#0      GCTCTACGAAATGAACCCACCAAGCTACCGATGGTTATACAACTTCGTTGCTGTAAACAA 600
consensus_13756#1      -------------------------------------------------------GAGTA 5
                                                                               *  *

consensus_13756#0      GCCTACCGATGGCAAAGTGTTCCTTCGTGCTCTTGGAAAGGAGAAGCAGGAGCTTGCAGA 660
consensus_13756#1      GAAAACTGGAGCACGAGGACACTGACATGGACT---AAAGGAGAAGCAGGAGCTTGCAGA 62
                       *   ** *  *    **    *   * **  **   ************************

consensus_13756#0      GCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGC 720
consensus_13756#1      GCGAGTGATGATAACTAGGCTTCACTTGTACAGCAAATGGATCAAGAAATGTGACCATGC 122
                       ************************************************************

consensus_13756#0      GATGATGTACGAGAGGATATCTGACGAGAACCTGGCGTTGATGCGAGAGCGGCTCATGGA 780
consensus_13756#1      GATGATGTACGAGAGGATATCTGACGAGAACCTGGCGTTGATGCGAGAGCGGCTCATGGA 182
                       ************************************************************

consensus_13756#0      GACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCC 840
consensus_13756#1      GACGGTCATCTGGCCAACAGACGACACCAACACTGAGAAGATTGGCTGAAAAATAATGCC 242
                       ************************************************************

consensus_13756#0      TGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAG 900
consensus_13756#1      TGATCTGTCTGCCTGACGCATACACTTCTTTTTGAGTTGCTCAACTTAATTAAACTTTAG 302
                       ************************************************************

consensus_13756#0      CTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGT 960
consensus_13756#1      CTCGTTAGGTAGAGCATTCTAAATTATTCCTGCTCGATCGAGTCCGATGTATATGTATGT 362
                       ************************************************************

consensus_13756#0      ATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATT 1020
consensus_13756#1      ATATTAAGTGTACAATTAATGTACCAAGCCAGTGTAATGGGTACAAATTCAAGATGCATT 422
                       ************************************************************

consensus_13756#0      CAGGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTTAGTTTGGTCATTTGGT 1080
consensus_13756#1      CAGGGTTAAGTATAGATTAAGATCTAGCTGATAGCGTGTGGTTTAGTTTGGTCATTTGGT 482
                       ************************************************************

consensus_13756#0      GAGTGAAGTGAAGAAGCTGCAAACTGTTTGGTCCATTTCATCGACAGTGTACAAGTACAA 1140
consensus_13756#1      GAGTGAAGTGAAGAAGCTGCAAACTGTTTGGTCCATTTCATCGACAGTGTACAAGTACAA 542
                       ************************************************************

consensus_13756#0      CGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAGTT 1200
consensus_13756#1      CGTAGCAACTAATACTTGTAATTTGGGTCAAGTTCGTCGACACAGTTTATTTCATGAGTT 602
                       ************************************************************

consensus_13756#0      ACAACTCTTGCTGTTGGTTTTAGAGAAAAAAAAAAAAAAAAAAAA 1245
consensus_13756#1      ACAACTCTTG----------------------------------- 612
                       **********                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)