cluster # 13780

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Oryza sativa
cluster # 13780 cluster # 13780 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13780#0 length = 1325 sequences # 12

consensus_13780#1 length = 538 sequences # 1
consensus_13780#2 length = 388 sequences # 1

consensusID : consensus_13780#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1325
fasta sequence

                              [AAAGAAAAAAAAAAAGCAGAGACATCTTCTCGAAGGCCTGAGCACCAATGGCACGGTATCTTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGAATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCCAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATATTCACTACAAGGGAGTTGCAGACCTGGTCACAGACACAGACAAATTGAGTGAGTCGGTCATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGACTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGATGGAACAACAAACTTTGCGCATGGTTACCCTAGCTTTTCTGTATCCATTGGAGTTCTGTTTCGCGGAAAGCCTGCTGCTTCCACTGTGGTCGAATTTTGTGGTGGTCCTATGTGCTGGAGCACTCGTACGGTTTCAGCATCATCTGGTGGTGGTGCTTATTGTAATGGGCAAAA-GATTCATGTCAGTAAGACAGACAAGGTGGAACAATCACTTCTGGTAACTGGTTTTGGTTATGAACA-TGATGATGCA-TGGGTGACCAACATAAATTTGTTCAAGGAATACACAGACATTAGCAGGGGAGTACGAAGACTAGGTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTACTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACTCAGCCATCGACTTTTGTTGGTTGTATGATTTATTTATGGAGAGAATTACCCAAATCACTTAAATTC]

[+] EMBL AK105887             [AAAGAAAAAAAAAAAGCAGAGACATCTTCTCGAAAGCCTGAGCACCAATGGCACGGTATCTTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGAATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCCAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATATTCACTACAAGGGAGTTGCAGACCTGGTCACAGACACAGACAAATTGAGTGAGTCGGTCATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGACTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGATGGAACAACAAACTTTGCGCATGGTTACCCTAGCTTTTCTGTATCCATTGGAGTTCTGTTTCGCGGAAAGCCTGCTGCTTCCACTGTGGTCGAATTTTGTGGTGGTCCTATGTGCTGGAGCACTCGTACGGTTTCAGCATCATCTGGTGGTGGTGCTTATTGTAATGGGCAAAA GATTCATGTCAGTAAGACAGACAAGGTGGAACAATCACTTCTGGTAACTGGTTTTGGTTATGAACA TGATGATGCA TGGGTGACCAACATAAATTTGTTCAAGGAATACACAGACATTAGCAGGGGAGTACGAAGACTAGGTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTACTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACTCAGCCATCGACTTTTGTTGGTTGTATGATTTATTTATGGAGAGAAT                    ]
[+] EMBL AK070107             [ AAGAAAAAAAAAAAGCAGAGACATCTTCTCGAAGGCCTGAGCACCAATGGCACGGTATCTTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGAATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCCAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATATTCACTACAAGGGAGTTGCAGACCTGGTCACAGACACAGACAAATTGAGTGAGTCGGTCATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGACTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGATGGAACAACAAACTTTGCGCATGGTTACCCTAGCTTTTCTGTATCCATTGGAGTTCTGTTTCGCGGAAAGCCTGCTGCTTCCACTGTGGTCGAATTTTGTGGTGGTCCTATGTGCTGGAGCACTCGTACGGTTTCAGCATCATCTGGTGGTGGTGCTTATTGTAATGGGCAAAA GATTCATGTCAGTAAGACAGACAAGGTGGAACAATCACTTCTGGTAACTGGTTTTGGTTATGAACA TGATGATGCA TGGGTGACCAACATAAATTTGTTCAAGGAATACACAGACATTAGCAGGGGAGTACGAAGACTAGGTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTACTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACTCAGCCATCGACTTTTGTTGGTTGTATGATTTATTTATGGAGAGAATTACCCAAATCA         ]
[+] EMBL OSR19471A            [           AAAAGCAGAGACATCTTCTCGAAGGCCTGAGCACCAATGGCACGGTATCTTCTCCGNCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGNAGGAATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGNAAAGCT GCCCCGTGATGGCGGTGGCGTCGGAGNAGCCCGCCGCGAGGGGCAAGTNCCCCAAGGTGGCCGNCCCCACCACCGGCCCGATTCCGGCCGCGGAGTTNCTCGGNGTTATTCAGGACGCAGNCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSR20192A            [           AAAAGCAGAGACATCTTCTNGAAGGCCTGAGCACCAATGGCACGGTATCTTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGAAGGAATGGCACAACCTCGNCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTNCCTCCAGGGCCGGNAAAGCT GCCCCGTGATGGCGGTGGCGTCGGAGCAGNCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK099345             [                         CTTCTCGAAGGCCTGAGCACCAATGGCACGGTATCTTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGAATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCCAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATATTCACTACAAGGGAGTTGCAGACCTGGTCACAGACACAGACAAATTGAGTGAGTCGGTCATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGACTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGATGGAACAACAAACTTTGCGCATGGTTACCCTAGCTTTTCTGTATCCATTGGAGTTCTGTTTCGCGGAAAGCCTGCTGCTTCCACTGTGGTCGAATTTTGTGGTGGTCCTATGTGCTGGAGCACTCGTACGGTTTCAGCATCATCTGGTGGTGGTGCTTATTGTAATGGGCAAAA GATTCATGTCAGTAAGACAGACAAGGTGGAACAATCACTTCTGGTAACTGGTTTTGGTTATGAACA TGATGATGCA TGGGTGACCAACATAAATTTGTTCAAGGAATACACAGACATTAGCAGGGGAGTACGAAGACTAGGTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTACTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTT                                                                       ]
[+] EMBL CB658221             [                                                        TATCTTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGAATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCCAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATATTCACTACAAGGGAGTTGCAGACCTGGTCACAGACACAGACAAATTGAGTGAGTCGGTCATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGACTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGATGGAACAACAAACTTTGCGCATGGTTACCCTAGCTTTTCTGTATCCATTGGAGTTCTGTTTCGCGGAAAGCCTGCTGCTTCCACTGTGGTCGAATTTTGTGGTGGTCCTATGTGCTGGAGCACTCGTACGGTTTCAGCATCATCTGGTGGTGGTGCTTATTGTAATGGGCAAAA GATTCATGTCAGTAAGACAGACAAGGTGGAACAATCACTTCTGGTAACTGGTTTTGGTTATGAACA TGATGATGCA TGGGTGACCAACATAAATTTGTTCAAGGGATACACAGACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK103039             [                                                              CTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGAATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCCAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATATTCACTACAAGGGAGTTGCAGACCTGGTCACAGACACAGACAAATTGAGTGAGTCGGTCATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGACTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGATGGAACAACAAACTTTGCGCATGGTTACCCTAGCTTTTCTGTATCCATTGGAGTTCTGTTTCGCGGAAAGCCTGCTGCTTCCACTGTGGTCGAATTTTGTGGTGGTCCTATGTGCTGGAGCACTCGTACGGTTTCAGCATCATCTGGTGGTGGTGCTTATTGTAATGGGCAAAA GATTCATGTCAGTAAGACAGACAAGGTGGAACGATCACTTCTGGTAACTGGTTTTGGTTATGAACA TGATGATGCA TGGGTGACCAACATAAATTTGTTCAAGGAATACACAGACATTAGCAGGGGAGTACGAAGACTAGGTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTACTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAGAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTT                                                                       ]
[-] EMBL CB658222             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTTTAGATGGAACAACAAACTTTGCGCATGGTTACCCTAGCTTTTCTGTATCCATTGGAGTTCTGTTTCGCGGAAAGCCTGCTGCTTCCACTGTGGTCGAATTTTGTGGTGGTCCTATGTGCTGGAGCACTCGTACGGTTTCAGCATCATCTGGTGGTGGTGCTTATTGTAATGGGCAAAA GATTCATGTCAGTAAGACAGACAAGGTGGAACAATCACTTCTGGTAACTGGTTTTGGTTATGAACA TGATGATGCA TGGGTGACCAACATAAATTTGTTCAAGGAATACACAGACATTAGCAGGGGAGTACGAAGACTAGGTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTACTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACTCAGCCATCGACTTTTGTTGGTTGTATGATTTATGTATGGAGAGAATTACCCAAATCACTTAAATTC]
[+] EMBL BQ907439             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGGCAAAAGGATTCATGTCAGTAAGACAGACAAGGTGGAACCATCACTTCTGGTAACTGGTTTTGGTTATGAACA TGATGATGCA TGGGTGACC ACATAAATTTGTTCAAGGAATACACAGACATTAGCAGGGGAGTACGAAGACTAGGTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTATTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACTCAGCCATCGACTTTTGTTGGTTGTATGATTTATTTATGGAGAGAATTACCCAAATCAaaaaa    ]
[+] EMBL BM038750             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           taAACT GTTTTGGTTATGAACACTGATGATGCACTGGGTGACCCACATAAATTTGTTCAAGGAATACACCGACCTTAGCAGGGGAGTACGAAGACTA GTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTATTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCCATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACTCAGCaaaa                                                          ]
[+] EMBL AU184323             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTACTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACTCAGCCATCGACTTTTGTTGGTTGTATGATTTAaaaaa                             ]
[+] EMBL AU173289             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCCACGTTGCCCTAGGCATTACAGAAGCCTACTGGGAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTGGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTTCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTAAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTTAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGGATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACTCAGCCATCGACTTTTGTTGGTTGTATGATTTAaaaaa                             ]




>consensus_13780#0
AAAGAAAAAAAAAAAGCAGAGACATCTTCTCGAAGGCCTGAGCACCAATGGCACGGTATC
TTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGA
ATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCG
GCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCC
CCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCC
AGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATA
TTCACTACAAGGGAGTTGCAGACCTGGTCACAGACACAGACAAATTGAGTGAGTCGGTCA
TTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGAC
TTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGATGGAACAACAA
ACTTTGCGCATGGTTACCCTAGCTTTTCTGTATCCATTGGAGTTCTGTTTCGCGGAAAGC
CTGCTGCTTCCACTGTGGTCGAATTTTGTGGTGGTCCTATGTGCTGGAGCACTCGTACGG
TTTCAGCATCATCTGGTGGTGGTGCTTATTGTAATGGGCAAAAGATTCATGTCAGTAAGA
CAGACAAGGTGGAACAATCACTTCTGGTAACTGGTTTTGGTTATGAACATGATGATGCAT
GGGTGACCAACATAAATTTGTTCAAGGAATACACAGACATTAGCAGGGGAGTACGAAGAC
TAGGTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTACTGGG
AATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGTG
GGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTTT
CCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTTA
AGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTTT
AAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAGG
ATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACTC
AGCCATCGACTTTTGTTGGTTGTATGATTTATTTATGGAGAGAATTACCCAAATCACTTA
AATTC

consensusID : consensus_13780#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 538
fasta sequence

                              [ACATCTTCTCGAAGGCCTGAGCACCAATGGCACGGTATCTTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGAATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCCAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATATTCACTACAAGGGAGTTGCAGACCTGGTCACAGAACAAATTGAGTGAGTCGGTCATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGACTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGGTTTGGCCACTTTATTCTCCCTCCGTTTCACAACGT]

[+] EMBL CB639887             [ACATCTTCTCGAAGGCCTGAGCACCAATGGCACGGTATCTTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGAATGGCACAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCCAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATATTCACTACAAGGGAGTTGCAGACCTGGTCACAGAACAAATTGAGTGAGTCGGTCATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGACTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGGTTTGGCCACTTTATTCTCCCTCCGTTTCACAACGT]




>consensus_13780#1
ACATCTTCTCGAAGGCCTGAGCACCAATGGCACGGTATCTTCTCCGTCCTCCCACCGCCG
CCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGAATGGCACAACCTCGCCGCGGG
GACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCCGGCAAAGCTCGCCCCGTGATGG
CGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGCCCCAAGGTGGCCGCCCCCACCA
CCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATCCAGGACGCAGCCAGGGCCGGAG
CCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAATATTCACTACAAGGGAGTTGCAG
ACCTGGTCACAGAACAAATTGAGTGAGTCGGTCATTCTGGAAGTTGTGAGGAAGACCTTC
CCAGACCACCTCATACTTGGGGAGGAAGGTGGACTTATTGGAGATGCCTTGTCGGAGTAT
CTCTGGTGCATTGATCCTTTAGGTTTGGCCACTTTATTCTCCCTCCGTTTCACAACGT

consensusID : consensus_13780#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 388
fasta sequence

                              [GCCCTTGGAATATGCTGCTGGTGTTCTGATAGTTGAAGAAGCCTGGTGGGATGGTGTCAACCGCATGGATGGTGGGGAGTTTAACCGTGCTTGTGGATGCGTTGCTGGCCCTTGGTTGTCCCAAATGGGTGGTGTGGAACATGATCCAGCTTTTGGGATCCGAGATTGGCCCCTCCCCACCAAGAAGATCTTAAGAAGAAAGGAATGGATTTGCCTCCTGGGGGNTTAAAACCCGGNCCAAANGCCCNTGCCCGACTTTTAAGGGGAACTCCCTCACCCCAGAGTTATTTTATANTATTAGAAGAAAAGAGAAACCAGAGGTTCTTTANGTTAAAACCCAGGTACNGGACGGAAATATTCCCTTNATGGAAGTCCTGTGGACTCAAAA]

[+] EMBL BQ906152             [GCCCTTGGAATATGCTGCTGGTGTTCTGATAGTTGAAGAAGCCTGGTGGGATGGTGTCAACCGCATGGATGGTGGGGAGTTTAACCGTGCTTGTGGATGCGTTGCTGGCCCTTGGTTGTCCCAAATGGGTGGTGTGGAACATGATCCAGCTTTTGGGATCCGAGATTGGCCCCTCCCCACCAAGAAGATCTTAAGAAGAAAGGAATGGATTTGCCTCCTGGGGGNTTAAAACCCGGNCCAAANGCCCNTGCCCGACTTTTAAGGGGAACTCCCTCACCCCAGAGTTATTTTATANTATTAGAAGAAAAGAGAAACCAGAGGTTCTTTANGTTAAAACCCAGGTACNGGACGGAAATATTCCCTTNATGGAAGTCCTGTGGACTCAAAA]




>consensus_13780#2
GCCCTTGGAATATGCTGCTGGTGTTCTGATAGTTGAAGAAGCCTGGTGGGATGGTGTCAA
CCGCATGGATGGTGGGGAGTTTAACCGTGCTTGTGGATGCGTTGCTGGCCCTTGGTTGTC
CCAAATGGGTGGTGTGGAACATGATCCAGCTTTTGGGATCCGAGATTGGCCCCTCCCCAC
CAAGAAGATCTTAAGAAGAAAGGAATGGATTTGCCTCCTGGGGGNTTAAAACCCGGNCCA
AANGCCCNTGCCCGACTTTTAAGGGGAACTCCCTCACCCCAGAGTTATTTTATANTATTA
GAAGAAAAGAGAAACCAGAGGTTCTTTANGTTAAAACCCAGGTACNGGACGGAAATATTC
CCTTNATGGAAGTCCTGTGGACTCAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13780#0      AAAGAAAAAAAAAAAGCAGAGACATCTTCTCGAAGGCCTGAGCACCAATGGCACGGTATC 60
consensus_13780#1      ---------------------ACATCTTCTCGAAGGCCTGAGCACCAATGGCACGGTATC 39
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      TTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGA 120
consensus_13780#1      TTCTCCGTCCTCCCACCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCTTCACACCGCAGGA 99
consensus_13780#2      ----------GCCCTTGGAATATGCTGCTGGTGTTCTGATAGTTGAAGAAGCCTGGTGGG 50
                                  ***   *     ** ** *  * *      *       *  * *  ** 

consensus_13780#0      ATGGCA-CAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCC 179
consensus_13780#1      ATGGCA-CAACCTCGCCGCGGGGACCGGTTCTTGGCCTCCGGGCGCTTGCCTCCAGGGCC 158
consensus_13780#2      ATGGTGTCAACCGCATGGATGGTGGGGAGTTTAACCGTGCTTGTGGATGCGTTGCTGGCC 110
                       ****   ***** *   *  **    *  * *   * * *  * *  *** *    ****

consensus_13780#0      GGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGC 239
consensus_13780#1      GGCAAAGCTCGCCCCGTGATGGCGGTGGCGTCGGAGCAGCCCGCCGCGAGGGGCAAGTGC 218
consensus_13780#2      CTT---GGTTGTCCCA-AATGG--GTGGTGT-GGAACATGATCCAGCTTTTGG-----GA 158
                             * * * ***   ****  **** ** *** **     * **    **     * 

consensus_13780#0      CCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATC 299
consensus_13780#1      CCCAAGGTGGCCGCCCCCACCACCGGCCCGATTCCGGCCGCGGAGCTCCTCGGCGTCATC 278
consensus_13780#2      TCCGAGATTGGC-CCCTCCCCACCAAGAAGATCTTAA--GAAGAAAGGAATGGATTTGCC 215
                        ** ** * * * *** * *****     ***       *  **       **  *   *

consensus_13780#0      CAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAAT 359
consensus_13780#1      CAGGACGCAGCCAGGGCCGGAGCCGAGGTTATAATGGAAGCTGTTAATAAGCCACGCAAT 338
consensus_13780#2      TCCTGGGGGNTTAAAACCCGGNCCAAANGCCCNTGCCCGACTTTTAAGGGGAACTCC--- 272
                             *     *   ** *  ** *              ** ****   *     *   

consensus_13780#0      ATTCACTACAAGGGAGTTGCAGACCTGGTCACAGACACAGACAAATTGAGTGAGTCGGTC 419
consensus_13780#1      ATTCACTACAAGGGAGTTGCAGACCTGGTCACAGA-----ACAAATTGAGTGAGTCGGTC 393
consensus_13780#2      -CTCACCCCAGAGTTATTTTA----TANTATTAGA-------AGAAAAGAGAAACCAGAG 320
                         ****  **  *   **  *    *  *   ***       * *       *  * *  

consensus_13780#0      ATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGA 479
consensus_13780#1      ATTCTGGAAGTTGTGAGGAAGACCTTCCCAGACCACCTCATACTTGGGGAGGAAGGTGGA 453
consensus_13780#2      GTTCTTTANGTTAAAACCCAGG---TACNGGACGGAAATATTCCCTTNATGGAAGTCCTG 377
                        ****  * ***   *   **    * *  ***      ** *       *****     

consensus_13780#0      CTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGATGGAACAACA 539
consensus_13780#1      CTTATTGGAGATGCCTTGTCGGAGTATCTCTGGTGCATTGATCCTTTAGGTTTGGCCACT 513
consensus_13780#2      TGGACTCAAAA------------------------------------------------- 388
                          * *  * *                                                 

consensus_13780#0      AACTTTGCGCATGGTTACCCTAGCTTTTCTGTATCCATTGGAGTTCTGTTTCGCGGAAAG 599
consensus_13780#1      TTATTCTCCCTCCGTTTCACAACGT----------------------------------- 538
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      CCTGCTGCTTCCACTGTGGTCGAATTTTGTGGTGGTCCTATGTGCTGGAGCACTCGTACG 659
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      GTTTCAGCATCATCTGGTGGTGGTGCTTATTGTAATGGGCAAAAGATTCATGTCAGTAAG 719
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      ACAGACAAGGTGGAACAATCACTTCTGGTAACTGGTTTTGGTTATGAACATGATGATGCA 779
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      TGGGTGACCAACATAAATTTGTTCAAGGAATACACAGACATTAGCAGGGGAGTACGAAGA 839
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      CTAGGTTCTGCTGCTGCTGACATGTCCCACGTTGCCCTAGGCATTACAGAAGCCTACTGG 899
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      GAATACCGACTTAAGCCTTGGGATATGGCTGCTGGTGTTCTGATAGTTGAAGAAGCTGGT 959
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      GGGATGGTGTCACGCATGGATGGTGGGGAGTTTACCGTCTTTGATCGTTCTGTCCTTGTT 1019
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      TCCAATGGTGTTGTACATGATCAGCTTTTGGATCGGATTGGCCCTGCCACAGAAGATCTT 1079
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      AAGAAGAAAGGAATTGATTTCTCCTTGTGGTTTAAACCCGACAAATACCCTACCGACTTT 1139
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      TAAGTTGAACTCCTCACCCAGAGCTATTTTATACTACTAGAAGAAAAGAGAAAAACAGAG 1199
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      GATCTTATGTTAAAATGCCATGTACTTGACTGAATATTTGTTTATTGAAGTCCTTTGACT 1259
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      CAGCCATCGACTTTTGTTGGTTGTATGATTTATTTATGGAGAGAATTACCCAAATCACTT 1319
consensus_13780#1      ------------------------------------------------------------
consensus_13780#2      ------------------------------------------------------------
                                                                                   

consensus_13780#0      AAATTC 1325
consensus_13780#1      ------
consensus_13780#2      ------