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Oryza sativa
cluster # 13787 cluster # 13787       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13787#0 length = 1463 sequences # 12  
consensus_13787#1 length = 631 sequences # 2  

consensusID : consensus_13787#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1463
fasta sequence
                              [GAGTAGAAACTCCTCCTCGCCTCGTTCCATTTCATCCCCTCCTCTCTCTCTCAAAACCCTAATTCCCCGACCCGAGCAAGCCCTAGGTCGCCGCCGCGCCGCGAGGTTGGAGGAGTTGGATTTGGGTCTGATTTGATTCGGATTGGGCGTGGTGGAGATGGCGGAGAAGGAGGTCGGGAGGATCTTCGTGGGCGGGCTGTCGTGGGACACCACGGAGCGCACGCTCGAGCGCGCCTTCAGCGAGTACGGCAAGGTCATCGAGACGCAGGTCGTATTGGAAAGAGACACAGGCCGCTCCCGTGGATTTGGGTTTGTTACATTCTCAGAACCTCGGGCTGTGGATGCTGCAATTCGGGGAATGCATAATGGAGAACTAGATGGCAGAACCATTTCTGTGAACAAGGCTCAACCTAGGATGAACACTGATGATGGCTATGGCTATGGTGGTGGTGGTGGTGGTGGTGGTACTTACTCATCTGGTGCTAGAGGTGGATATCGTGGTGGAGGTGATGCAGTTCCCTCTGCAAATGATGACTGCTTCAAATGTGGCCGTGCGGGACATTGGGCTCGTGAATGTCCTTATTCCAGTGGAGGTGGGGGTGGTAGAACTGGAAGGTACTCA-CCCCCTTCCAGATATGGCAGTGGAACTGGTGGTGGACGTGGTGACCGCTTTGGAGGATCAGACCGTTTTGCTAACCGCTATGTTGATGACCGATATGATGGTGGGCGCTATGTTGATGATCGCTATGGTGGTGGTGGACGTGATCGATATGCCACTGATCGCTATCCACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTATGCATCAAGTGGATTTACCA-GGGAAAGAAGCTATGAAAGAGATGGAGGACGGTCCGGTGGAAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCATGGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTC-GGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCACATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTGGATAGCATTGAAGATTAAAAAAAAAAATGTGGTTTCTGGAACCTGGATAGATGTTACATCTGCTGGAAAGAAAATTCATACTG]

[+] EMBL CF313309             [GAGTAGAAACTCCTCCTCGCCTCGTTCCATTTCATCCCCTCCTCTCTCTCTCAAAACCCTAATTCCCCGACCCGAGCAAGCCCTAGGTCGCCGCCGCGCCGCGAGGTTGGAGGAGTTGGATTTGGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK103069             [                  GCCTCATTCCATTTCATCCCCTCCTCTCTCTCTCAAAACCCTAATTCCCCGACCCGAGCAAGCCCTAGGTCGCCGCCGCGCCGCGAGGTTGGAGGAGTTGGATTTGGGTCTGATTTGATTCGGATTGGGCGTGGTGGAGATGGCGGAGAAGGAGGTCGGGAGGATCTTCGTGGGCGGGCTGTCGTGGGACACCACGGAGCGCACGCTCGAGCGCGCCTTCAGCGAGTACGGCAAGGTCATCGAGACGCAGGTCGTATTGGAAAGAGACACAGGCCGCTCCCGTGGATTTGGGTTTGTTACATTCTCAGAACCTCGGGCTGTGGATGCTGCAATTCGGGGAATGCATAATGGAGAACTAGATGGCAGAACCATTTCTGTGAACAAGGCTCAACCTAGGATGAACACTGATGATGGCTATGGCTATGGTGGTGGTGGTGGTGGTGGTGGTACTTACTCATCTGGTGCTAGAGGTGGATATCGTGGTGGAGGTGATGCAGTTCCCTCTGCAAATGATGACTGCTTCAAATGTGGCCGTGCGGGACATTGGGCTCGTGAATGTCCTTATTCCAGTGGAGGTGGGGGTGGTAGAACTGGAAGGTACTCA CCCCCTTCCAGATATGGCAGTGGAACTGGTGGTGGACGTGGTGACCGCTTTGGAGGATCAGACCGTTTTGCTAACCGCTATGTTGATGACCGATATGATGGTGGGCGCTATGTTGATGATCGCTATGGTGGTGGTGGACGTGATCGATATGCCACTGATCGCTATCCACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTATGCATCAAGTGGATTTACCA GGGAAAGAAGCTATGAAAGAGATGGAGGACGGTCCGGTGGAAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCATGGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTGCTGATGGAGGTTACTTC GGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCACATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTGGATAGCATTGAA                                                                       ]
[+] EMBL AU184070             [                                CATCCCCTCCTCTCTCTCTCAAAACCCTAATTCCCCGACCCGAGCAAGCCCTAGGTCGCCGCCGCGCCGCGAGGTTGGAGGAGTTGGATTTGGGTCTGATTTGATTCGGATTGGGCGTGGTGGAGATGGCGGAGAAGGAGGTCGGGAGGATCTTCGTGGGCGGGCTGTCGTGGGACACCACGGAGCGCACGCTCGAGCGCGCCTTCAGCGAGTACGGCAAGGTCATCGAGACGCAGGTCGTATTGGAAAGAGACACAGGCCGCTCCCGTGGATTTGGGTTTGTTACATTCTCAGAACCTCGGGCTGTGGATGCTGCAATTCGGGGAATGCATAATGGAGAACTAGATGGCAGAACCATTTCTGTGAACAAGGCTCAACCTAGGATGAACACTGATGATGGCTATGGCTATGGTGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU173111             [                                CATCCCCTCCTCTCTCTCTCAAAACCCTAATTCCCCGACCCGAGCAAGCCCTAGGTCGCCGCCGCGCCGCGAGGTTGGAGGAGTTGGATTTGGGTCTGATTTGATTCGGATTGGGCGTGGTGGAGATGGCGGAGAAGGAGGTCGGGAGGATCTTCGTGGGCGGGCTGTCGTGGGACACCACGGAGCGCACGCTCGAGCGCGCCTTCAGCGAGTACGGCAAGGTCATCGAGACGCAGGTCGTATTGGAAAGAGACACAGGCCGCTCCCGTGGATTTGGGTTTGTTACATTCTCAGAACCTCGGGCTGTGGATGCTGCAATTCGGGGAATGCATAATGGAGAACTAGATGGCAGAACCATTTCTGTGAACAAGGCTCAACCTAGGATGAACACTGATGATGGCTATGGCTATGGTGGTGGTGGTGGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA753043             [                                                                                                                                                                                                              ACACCACAGAGCGCACGCTCGAGCGCGCCTTCAGCGAGTACGGCAAGGTCATCGAGACGCAGGTCGTATTGGAAAGAGACACAGGCCGCTCCCGTGGATTTGGGTTTGTTACATTCTCAGAACCTCGGGCTGTGGATGCTGCAATTCGGGGAATGCATAATGGAGAACTAGATGGCAGAACCATTTCTGTGAACAAGGCTCAACCTAGGATGAACACTGATGATGGCTATGGCTATGGTGGTGGTGGTGGTGGTGGTGGTACTTACTCATCTGGTGCTAGAGGTGGATATCGTGGTGGAGGTGATGCAGTTCCCTCTGCAAATGATGACTGCTTCAAATGTGGCCGTGCGGGACATTGGGCTCGTGAATGTCCTTATCCCAGTGGAGGTGGGGGTGGTAGAACTGGAAGGTACTCACCCCCCTTCCAGATATGGCAGTGGAACTGGTGGTGGACGTGGTGACCGCTTTGGAGGATCCGACCGTTTTGCTAACCGCTATGTCGATGACCGATATGATGGTGGGCGCCATGTNGATGATCGCTATGGTGGTGGGTGACGTGATCGATATGCCCCTGATCGCTATCC CCCACTGCCCATCG TNTACAGGTGACCGATATGGTGG TCTGATCG TATGCCT TAGTGGA TCACCC GGGAAgac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK059768             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGAGGTGGATATCGTGGTGGAGGTGATGCAGTTCCCTCTGCAAATGATGACTGCTTCAAATGTGGCCGTGCGGGACATTGGGCTCGTGAATGTCCTTATTCCAGTGGAGGTGGGGGTGGTAGAACTGGAAGGTACTCA CCCCCTTCCAGATATGGCAGTGGAACTGGTGGTGGACGTGGTGACCGCTTTGGAGGATCAGACCGTTTTGCTAACCGCTATGTTGATGACCGATATGATGGTGGGCGCTATGTTGATGATCGCTATGGTGGTGGTGGACGTGATCGATATGCCACTGATCGCTATCCACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTATGCATCAAGTGGATTTACCA GGGAAAGAAGCTATGAAAGAGATGGAGGACGGTCCGGTGGAAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCATGGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTC GGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCACATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTGGATAGCATTGAAGATTACTGTGACACATGTGGTTTCTGGAACCTGGATAGATGTTACATCTGCTGGAAAGAAAATTCATACTG]
[-] EMBL CB684452             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTGGAACTGGTGGTGGACGTGGTGACCGCTTTGGAGGATCAGACCGTTTTGCTAACCGCTATGTTGATGACCGATATGATGGTGGGCGCTATGTTGATGATCGCTATGGTGGTGGTGGACGTGATCGATATGCCACTGATCGCTATCCACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTATGCATCAAGTGGATTTACCA GGGAAAGAAGCTATGAAAGAGATGGAGGACGGTCCGGTGGAAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCATGGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTC GGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCACATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAAGGGTGTTCCGAGTGTGCTGTC                                                                                                     ]
[+] EMBL BE228777             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          cgagTCGATATGCCACTGATCGCTATCCACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTATGCATCAAGTGGATTTACCANGGGAAAGAAGCTATGANAGAGATGGAGGACGGTCCGGTGGAAGTTACTATCGTGATGAACCTANANGCTCTGGTGGTTATGACAGANGTGGCATGCGCATGGGGAGTGGTGACAGATACNGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGANATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTNTGATGACCGCTACTGATGGAGGTTACTTC GGAGCATTTCAGAAGACCAGAATTACAAATATGTGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCNACTCTTTGAGTGTTGTTCTTCCAT CAGTTTGTTTAATTACTANTGAGACAATNAGGCAGTTCTTGAATTGTTAGTATGTTGGCACATTAAGCTCCNGGCAGTGGGTGATTCTGATT                                                                                                                                                                     ]
[+] EMBL AU093619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGAGGACGGTCCGGTGGAAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCATGGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTC GGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCACAT                                                                                                                                                                                                  ]
[+] EMBL AU173112             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGATAGGCCTGCCCCATATGATNGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTC GGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTNTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTNTTGAATTGTTAGTATGTTGGCACATTAAGCTCCAGGCAGTGGGTGATTNTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTNTTATATAATTTTATTNTGGATAGCATTGAAaaa                                                                    ]
[+] EMBL AT003546             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTCGGGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCTTCCATGCAGTTTG TTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCACATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTGGATAGCATTGAAGATTAAAAAAAAAA                                                         ]
[+] EMBL AT003647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTC GGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCTTCCATGCAGTTTG TTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCACATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTGGATAGCATTGAAGATTAAAAAAAAAA                                                         ]


>consensus_13787#0 GAGTAGAAACTCCTCCTCGCCTCGTTCCATTTCATCCCCTCCTCTCTCTCTCAAAACCCT AATTCCCCGACCCGAGCAAGCCCTAGGTCGCCGCCGCGCCGCGAGGTTGGAGGAGTTGGA TTTGGGTCTGATTTGATTCGGATTGGGCGTGGTGGAGATGGCGGAGAAGGAGGTCGGGAG GATCTTCGTGGGCGGGCTGTCGTGGGACACCACGGAGCGCACGCTCGAGCGCGCCTTCAG CGAGTACGGCAAGGTCATCGAGACGCAGGTCGTATTGGAAAGAGACACAGGCCGCTCCCG TGGATTTGGGTTTGTTACATTCTCAGAACCTCGGGCTGTGGATGCTGCAATTCGGGGAAT GCATAATGGAGAACTAGATGGCAGAACCATTTCTGTGAACAAGGCTCAACCTAGGATGAA CACTGATGATGGCTATGGCTATGGTGGTGGTGGTGGTGGTGGTGGTACTTACTCATCTGG TGCTAGAGGTGGATATCGTGGTGGAGGTGATGCAGTTCCCTCTGCAAATGATGACTGCTT CAAATGTGGCCGTGCGGGACATTGGGCTCGTGAATGTCCTTATTCCAGTGGAGGTGGGGG TGGTAGAACTGGAAGGTACTCACCCCCTTCCAGATATGGCAGTGGAACTGGTGGTGGACG TGGTGACCGCTTTGGAGGATCAGACCGTTTTGCTAACCGCTATGTTGATGACCGATATGA TGGTGGGCGCTATGTTGATGATCGCTATGGTGGTGGTGGACGTGATCGATATGCCACTGA TCGCTATCCACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTA TGCATCAAGTGGATTTACCAGGGAAAGAAGCTATGAAAGAGATGGAGGACGGTCCGGTGG AAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCAT GGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGA TAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTA CTGATGGAGGTTACTTCGGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTT CGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCT TCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATG TTGGCACATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGT AATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTG GATAGCATTGAAGATTAAAAAAAAAAATGTGGTTTCTGGAACCTGGATAGATGTTACATC TGCTGGAAAGAAAATTCATACTG



consensusID : consensus_13787#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 631
fasta sequence
                              [CCAGAGGACGAGACAAGGGGACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTATGCATCAAGTGGATTTACCAGGGAAAGAAGCTATGAAAGAGATGGAGGACGGTCCGGTGGAAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCATGGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTCGGAGCATTTCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTTTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCCCATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTGGATAAAAAAAAAAAAAAAAA]

[-] EMBL CA760872             [CCAGAGGACGAGACAAGGGGACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTATGCATCAAGTGGATTTACCAGGGAAAGAAGCTATGAAAGAGATGGAGGACGGTCCGGTGGAAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCATGGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTCGGAGCATTTCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTTTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCCCATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTGGATAAAAAAAAAAAAAAAAA]
[+] EMBL AU093620             [                                                                                                                  GGAGGACGGTCCGGTGGAAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCATGGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTACTGATGGAGGTTACTTCGGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATGTTGGCACATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTGGATAAAAAAAAAAA      ]


>consensus_13787#1 CCAGAGGACGAGACAAGGGGACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGT TCTGATCGTTATGCATCAAGTGGATTTACCAGGGAAAGAAGCTATGAAAGAGATGGAGGA CGGTCCGGTGGAAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGT GGCATGCGCATGGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGG AGTTACAGAGATAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTAT GATGACCGCTACTGATGGAGGTTACTTCGGAGCATTTCAGAAGACCAGAATTACAAATAT ATGTTCCAGTTCGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTG AGTGTTGTTTTTCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAA TTGTTAGTATGTTGGCCCATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCG TGGTACTGTGTAATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATA ATTTTATTCTGGATAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13787#0      GAGTAGAAACTCCTCCTCGCCTCGTTCCATTTCATCCCCTCCTCTCTCTCTCAAAACCCT 60
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      AATTCCCCGACCCGAGCAAGCCCTAGGTCGCCGCCGCGCCGCGAGGTTGGAGGAGTTGGA 120
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      TTTGGGTCTGATTTGATTCGGATTGGGCGTGGTGGAGATGGCGGAGAAGGAGGTCGGGAG 180
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      GATCTTCGTGGGCGGGCTGTCGTGGGACACCACGGAGCGCACGCTCGAGCGCGCCTTCAG 240
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      CGAGTACGGCAAGGTCATCGAGACGCAGGTCGTATTGGAAAGAGACACAGGCCGCTCCCG 300
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      TGGATTTGGGTTTGTTACATTCTCAGAACCTCGGGCTGTGGATGCTGCAATTCGGGGAAT 360
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      GCATAATGGAGAACTAGATGGCAGAACCATTTCTGTGAACAAGGCTCAACCTAGGATGAA 420
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      CACTGATGATGGCTATGGCTATGGTGGTGGTGGTGGTGGTGGTGGTACTTACTCATCTGG 480
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      TGCTAGAGGTGGATATCGTGGTGGAGGTGATGCAGTTCCCTCTGCAAATGATGACTGCTT 540
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      CAAATGTGGCCGTGCGGGACATTGGGCTCGTGAATGTCCTTATTCCAGTGGAGGTGGGGG 600
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      TGGTAGAACTGGAAGGTACTCACCCCCTTCCAGATATGGCAGTGGAACTGGTGGTGGACG 660
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      TGGTGACCGCTTTGGAGGATCAGACCGTTTTGCTAACCGCTATGTTGATGACCGATATGA 720
consensus_13787#1      ------------------------------------------------------------
                                                                                   

consensus_13787#0      TGGTGGGCGCTATGTTGATGATCGCTATGGTGGTGGTGGACGTGATCGATATGCCACTGA 780
consensus_13787#1      ------------------------------------------------CCAGAGGACGAG 12
                                                                         *    **   

consensus_13787#0      TCGCTATCCACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTA 840
consensus_13787#1      ACAAGGGG-ACCAACTGCCGATCGTTTTACAGGTGACAGATATGGTGGTTCTGATCGTTA 71
                        *       ***************************************************

consensus_13787#0      TGCATCAAGTGGATTTACCAGGGAAAGAAGCTATGAAAGAGATGGAGGACGGTCCGGTGG 900
consensus_13787#1      TGCATCAAGTGGATTTACCAGGGAAAGAAGCTATGAAAGAGATGGAGGACGGTCCGGTGG 131
                       ************************************************************

consensus_13787#0      AAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCAT 960
consensus_13787#1      AAGTTACTATCGTGATGAACCTAGAGGCTCTGGTGGTTATGACAGAGGTGGCATGCGCAT 191
                       ************************************************************

consensus_13787#0      GGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGA 1020
consensus_13787#1      GGGGAGTGGTGACAGATACGGGACCGGTGGACCTGCTCGCTTTGCTGGGAGTTACAGAGA 251
                       ************************************************************

consensus_13787#0      TAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTA 1080
consensus_13787#1      TAGGCCTGCCCCATATGATCGTCCCAGCCGGGCAGCAGCACGCACTTATGATGACCGCTA 311
                       ************************************************************

consensus_13787#0      CTGATGGAGGTTACTTCGGAGCATTGCAGAAGACCAGAATTACAAATATATGTTCCAGTT 1140
consensus_13787#1      CTGATGGAGGTTACTTCGGAGCATTTCAGAAGACCAGAATTACAAATATATGTTCCAGTT 371
                       ************************* **********************************

consensus_13787#0      CGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTCT 1200
consensus_13787#1      CGCAGTTCCTACTTTATTTGCCTTCCTGTATTAGTACATCGACTCTTTGAGTGTTGTTTT 431
                       ********************************************************** *

consensus_13787#0      TCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATG 1260
consensus_13787#1      TCCATGCAGTTTGTTTAATTACTAGTGAGACAATAAGGCAGTTCTTGAATTGTTAGTATG 491
                       ************************************************************

consensus_13787#0      TTGGCACATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGT 1320
consensus_13787#1      TTGGCCCATTAAGCTCCAGGCAGTGGGTGATTCTGATTCCCTGTTATCGTGGTACTGTGT 551
                       ***** ******************************************************

consensus_13787#0      AATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTG 1380
consensus_13787#1      AATTACCCTCCAGTGTAATAATCGTGTTCCGAGTGTGCTGTCTTATATAATTTTATTCTG 611
                       ************************************************************

consensus_13787#0      GATAGCATTGAAGATTAAAAAAAAAAATGTGGTTTCTGGAACCTGGATAGATGTTACATC 1440
consensus_13787#1      GATA------AAAAAAAAAAAAAAAA---------------------------------- 631
                       ****      ** *  **********                                  

consensus_13787#0      TGCTGGAAAGAAAATTCATACTG 1463
consensus_13787#1      -----------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)