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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13791#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1960 fasta sequence
[CCATAAATCGAGGACACCCACGCTGCCGCTGCCACTGCACACGCACGCAGCGAGTCGCGACACGAGACCGTACCGTGGAAAGAAGAGAGCGAGGCGAGGACACCACTCCGCTCCGCTCCACCGCCGGGTCGCCGCGCCGCGCGCGGC-CCGAGCTCGCCGATCGAGAGCCATGAGCCTCATCCTTTCCCGGCGGCGCCTCGCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTCCAGGTGGATGCACACGCCGCCATTCGCGACGGTGTCTCCTCAGGAAATTTCAGGTTCG-AGCCCGGCGG-AAGTGCAGAATTTTGTGCAGGGCAGTTGGAC-AACATCT-GGTAACTGGAATTGGCTAGTTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCAGGAAGCAGAAATAAAGCCATTTGTAGAGAGTTTATCTAATTGCCCAAAGCATGGACTTCACAACCCACTTAAAGCTCCAGAGAGGTATCTCATGTATGGAGATATATCTGCCAAAGCTGCAAACATGCTTGGTCAACCTGTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTATCTCCAAAGAGCTATCAGCAAGCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTGGAGAACTTTTGTGGAGATCAGGTACGCTTTCTGGCTCGATCATTTGCTGTACCTGGCAACCATCTTGGACAAAGCAGTAATGGTTACCGTTGGCCATATGGT-CCGGTTGCAATTATCACACCGTTCAATTTCCCATTGGAGATTCCATTACTGCAACTAATGGGAGCACTGTATATGGGAAATAAACCTGTCCTCAAAGTTGACAGCAAAGTTAGCATTGTGATGGACCAGATGCTTAGGTTGCTTCACGCATGTGGGATGCCAGCAGAGGATGTGGACTTCATAAATTCTGATGGTATCACGATGAACAAGCTGCTGTTAGAGGCAAATCCGAAAATGACCCTCTTCACTGGGAGCTCACGGATAGCAGAGAAATTGGCTGCTGATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGTTTTGACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTGCGACCAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTATTCATGCACAAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGGAAGCTTGAAGACTTGACCATTGGCCCAGTCCTTACTGTTACAACATCAAGCATGATAGAGCACATGAAAAACCTTCTCAAAATACCAGGATCAAAGGTCCTGTTTGGTGGTGAACCTCTGGAGAACCATTCTATCCCAGAAATATATGGTGCCTTCAAACCAACTGCTGTATTTGTTCCTCTATCGGAAATCCTTAAAAGTGGCAATTTTGAGCTTGTGACA-AGGGAGATCTTTGGTCCTTTCCAGGTGGTTACA-GAGTATTCTGATGATGAGCTTGAATTAGTATTAGAAGCCTGTGAAAGGATGAACGCTCATCTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAAGTACTTGGGCGATCAGTTAACGGGACAACATATGCCGGCATCCGAG-CAAGGACAACTGGTGCTCCA-CAGAACCA-CTGGTTTGGGCCTGCTGGTGATCCA-AGAGGTGCA-GGGATCGGAACTCCAGAAGCCATTAAACTCGTTTGGTCTTGCC-A-CAGGGAGATCATATATGACA-T-TGGCCCCTTGCCTAAGAACCGGGCACTACCTTCCGCTACATAAATA-CTATGTCAAGGCTAGATTAGCTTGTAGCATGTTATTCTGAATAATTTGCCCCGTCTGGGCAATCATGTGTTTCATTAACCCCGAGAGCATAATAAAAAGGCAGGAAATGGTTGTGAAAAAAAAAATGAATAAAAA]
[+] EMBL C72049 [CCATAAATCGAGGACACCCACGCTGCCGCTGCCACTGCACACGCACGCAGCGAGTCGCGACACGAGACCGTACCGTGGAAAGAAGAGAGCGAGGCGAGGACACCACTCCGCTCCGCTCCACCGCCGGGTCGCCGCGCCGCGCG GCCNCNGAGCTCGCCGATCGAAAGCCATGAGCCTCATCCTTTCCNGGCGGCGCCTCGCCG CGCCGTCCGGCGGTNAGGCCCCGCNGCGCTCGNTTCCAGGTGGATGCACACGACGCCATTCGCAACGGTNTCTCCTCAGGAAATTTNAGGTTCGAAGCCCGGCGGAAAGTGCAGAATTTTTTGCAGGGCAGTTGGACAAACATCTGGGTAACTG ]
[+] EMBL AK121765 [ CCACGCTGCCGCTGCCACTGCACACGCACGCAGCGAGTCGCGACACGAGACCGTACCGTGGAAAGAAGAGAGCGAGGCGAGGACACCACTCCGCTCCGCTCCACCGCCGGGTCGCCGCGCCGCGCGCGGC CCGAGCTCGCCGATCGAGAGTCATGAGCCTCATCCTTTCCCGGCGGCGCCTCGCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTCCAGGTGGATGCACACGCCGCCATTCGCGACGGTGTCTCCTCAGGAAATTTCAGGTTCG AGCCCGGCGG AAGTGCAGAATTTTGTGCAGGGCAGTTGGAC AACATCT GGTAACTGGAATTGGCTAGTTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCAGGAAGCAGAAATAAAGCCATTTGTAGAGAGTTTATCTAATTGCCCAAAGCATGGACTTCACAACCCACTTAAAGCTCCAGAGAGGTATCTCATGTATGGAGATATATCTGCCAAAGCTGCAAACATGCTTGGTCAACCTGTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTATCTCCAAAGAGCTATCAGCAAGCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTGGAGAACTTTTGTGGAGATCAGGTACGCTTTCTGGCTCGATCATTTGCTGTACCTGGCAACCATCTTGGACAAAGCAGTAATGGTTACCGTTGGCCATATGGT CCGGTTGCAATTATCACACCGTTCAATTTCCCATTGGAGATTCCATTACTGCAACTAATGGGAGCACTGTATATGGGAAATAAACCTGTCCTCAAAGTTGACAGCAAAGTTAGCATTGTGATGGACCAGATGCTTAGGTTGCTTCACGCATGTGGGATGCCAGCAGAGGATGTGGACTTCATAAATTCTGATGGTATCACGATGAACAAGCTGCTGTTAGAGGCAAATCCGAAAATGACCCTCTTCACTGGGAGCTCACGGATAGCAGAGAAATTGGCTGCTGATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGTTTTGACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTGCGACCAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTATTCATGCACAAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGGAAGCTTGAAGACTTGACCATTGGCCCAGTCCTTACTGTTACAACATCAAGCATGATAGAGCACATGAAAAACCTTCTCAAAATACCAGGATCAAAGGTCCTGTTTGGTGGTGAACCTCTGGAGAACCATTCTATCCCAGAAATATATGGTGCCTTCAAACCAACTGCTGTATTTGTTCCTCTATCGGAAATCCTTAAAAGTGGCAATTTTGAGCTTGTGACA AGGGAGATCTTTGGTCCTTTCCAGGTGGTTACA GAGTATTCTGATGATGAGCTTGAATTAGTATTAGAAGCCTGTGAAAGGATGAACGCTCATCTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAAGTACTTGGGCGATCAGTTAACGGGACAACATATGCCGGCATCCGAG CAAGGACAACTGGTGCTCCA CAGAACCA CTGGTTTGGGCCTGCTGGTGATCCA AGAGGTGCA GGGATCGGAACTCCAGAAGCCATTAAACTCGTTTGGTCTTGCC A CAGGGAGATCATATATGACA T TGGCCCCTTGCCTAAGAACCGGGCACTACCTTCCGCTACATAAATA CTATGTCAAGGCTAGATTAGCTTGTAGCATGTTATTCTGAATAATTTGCCCCGTCTGGGCAATCATGTGTTTCATTAACCCCGAGAGCATAATAAAAAGGCAGGA ]
[+] EMBL CB637962 [ TACCGTGGAAAGAANA AGCGAGGCGAGGACACCACTCCGCTCCGCTCCACCGCCGGGTCGCCGCGCCGCGCGCGGC CCGAGCTCGCCGATCGAGAGCCATGAGCCTCATCCTTTCCCGGCGGCGCCTCTCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTCCAGGTGGATGCACACGCCGCCATTCGCGACGGTGTCTCCTCAGGAAATTTCAGGTTCG AGCCCGGCGG AAGTGCAGAATTTTGTGCAGGGCAGTTGGAC AACATCT GGTAACTGGAATTGGCTAGTTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCAGGAAGCAGAAATAAAGCCATTTGTAGAGAGTTTATCTAATTGCCCAAAGCATGGACTTCACAACCCACTTAAAGCTCCAGAGAGGTATCTCATGTATGGAGATATATCTGCCAAAGCTGCAAACATGCTTGGTCAACCTGTGGTTTCAGATTTCTTTG ]
[+] EMBL CF322823 [ GCCGATCGAGAGCCATGAGCCTCATCCTTTCCCGGCGGCGCCTCGCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTCCAGGTGGATGCACACGCCGCCATTCGCGACGGTGTCTCCTCAGGAAATTTCAGGTTCG AGCCCGGCGG AAGTGCAGAATTTTGTGCAGGGCAGTTGGAC AACATCT GGTAACTGGAATTGGCTAGTTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCAGGAAGCAGAAATAAAGCCATTTGTAGAGAGTTTATCTAATTGCCCAAAGCATGGACTTCACAACCCACTTAAAGCTCCAGAGAGGTATCTCATGTATGGAGATATATCTGCCAAAGCTGCAAACATGCTTGGTCAACCTGTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTATCTCCAAAGAGCTATCAGCAAGCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTG ]
[+] EMBL CF323731 [ CGCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTCCAGGTGGATGCACACGCCGCCATTCGCGACGGTGTCTCCTCAGGAAATTTCAGGTTCG AGCCCGGCGG AAGTGCAGAATTTTGTGCAGGGCAGTTGGAC AACATCT GGTAACTGGAATTGGCTAGTTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCAGGAAGCAGAAATAAAGCCATTTGTAGAGAGTTTATCTAATTGCCCAAAGCATGGACTTCACAACCCACTTAAAGCTCCAGAGAGGTATCTCATGTATGGAGATATATCTGCCAAAGCTGCAAACATGCTTGGTCAACCTGTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTATCTCCAAAGAGCTATCAGCAAGCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTGGAGAACTTTTGTGGAGATCAGGTACGCTTTCTGGCTCGATCATTTGCTGTACCTGGCAACCATCTTGGACAAAGCAGTAATGGTTACCGTTGGCCATATGGTCCCGGTTGCAATTATCACACCGTTCAATTTCCCATTGGAGATTCCATTACTGCAACTAATGGGAGCACTGTATATGGGAAATAA ]
[-] EMBL CB622936 [ AAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGGAAGCTTGAAGACTTGACCATTGGCCCAGTCCTTACTGTTACAACATCAAGCATGATAGAGCACATGAAAAACCTTCTCAAAATACCAGGATCAAAGGTCCTGTTTGGTGGTGAACCTCTGGAGAACCATTCTATCCCAGAAATATATGGTGCCTTCAAACCAACTGCTGTATTTGTTCCTCTATCGGAAATCCTTAAAAGTGGCAATTTTGAGCTTGTGACA AGGGAGATCTTTGGTCCTTTCCAGGTGGTTACA GAGTATTCTGATGATGAGCTTGAATTAGTATTAGAAGCCTGTGAAAGGATGAACGCTCATTTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAAGTACTTGGGCGATCAGTTAACGGGACAACATATGCCGGCATCCGAG CAAGGACAACTGGTGCTCCA CAGAACCA CTGGTTTGGGCCTGCTGGTGATCCA AGAGGTGCA GGGATCGGAACTCCAGAAGCCATTAAACTCGTTTGGTCTTGCC A CAGGGAGATCATATATGACA T TGGCCCCTTGCCTAAGAACCGGGCACTACCTTCCGCTACATAAATA CTATGTCAAGGCTAGATTAGCTTGTAGCATGTTATTCTGAATAATTTGCCCCGTCTGGGCAATCATGTGTTTCATTAACCCCGAGAGCATAATAAAAAGGCAGGAAATGGTTG ]
[+] EMBL AU101111 [ CANCATCAAGCATGATAGAGCACATGAAAAACCTTCTCAAAATACCAGGATCAAAGGTCCTGTTTGGTGGTGAACCTCTGGAGAACCATTCTATCCCAGAAATATATGGTGCCTTCAAACCAACTGCTGTATTTGTTCCTCTATCGGAAATCCTTAAAAGTGGCAATTTTGAGCTTGTGACA AGGGAGATCTTTGGTCCTTTCCAGGTGGTTACA GAGTATTCTGATGATGAGCTTGAATTAGTATTAGAAGCCTGTGAAAGGATGAACGCTCATCTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAAGTACTTGGGCGATCAGTTAACGGGACAACATATGCCGGNATCCGAG CAAGGACAACTGGTGCTCCA CAGAACCA CTGGTTTGGGCCTGCTGGTGATCCA AGAGGTGCA GGGATCGGAACTCCAGAAGCCATTAAACTCGTTTGGTCTTGCC A CAGGGAGATCATATATGACA T TGGCCCCTTGCCTAAGAACCGGGCACTACCTTCCGCTACATAAATA CTATGTCAAGGCTAGATTAGCTTGTAGCATGTTATTCTGAATAATTTGCCCCGTCTGGGCAATCATGTGTTTCATTAACCCCGAGAGCATAATAAAAAGGCAGGAAATGGTTGTGAAATGTGTTCTGAATAAAAA]
[-] EMBL CB637963 [ TTTTGAGCTTGTGACA AGGGAGATCTTTGGTCCTTTCCAGGTGGTTACA GAGTATTTTGATGATGAGCTTGAATTAGTATTAGAAGCCTGTGAAAGGATGAACGCTCATTTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAAGTACTTGGGCGATCAGTTAACGGGACAACATATGCCGGCATCCGAG CAAGGACAACTGGTGCTCCA CAGAACCA CTGGTTTGGGCCTGCTGGTGATCCA AAAGGTGCA GGGATCGGAACTCCAGAAGCCATTAAACTTGTTTGGTTTTGCC A CAGGGAGATCATATATGACA T TGGCCCCTTGCCTAAGAACCGGGCACTACCTTCCGGTACATAAATA CTATGTCAAGGCTAGATTAGCTTGTAGCATGTTATTTTGAATAATTTGCCCCGTTTGGGCAATCATGTGTTTCATTAACCCCGAGAGCATAATAAAAAGGCAGGAAA ]
[+] EMBL BI804887 [ AGCTTGTGACACAGGGAGATCTTTGGTCCTTTCCAGGTGGTTACACGAGTATTCTGATGATGAGCTTGAATTAGTATTAGAAGCCTGTGAAAGGATGAACGCTCATCTGACGGCT CAGTTGTTTCCAACGACCCTTTATTCCTGCAGGAAGTACTTGGGCGATCAGTTAACGGGACAACATATGCCGGCATCCGAGCCAAGGACAACTGGTGCTCCA CAGAACCACCTGGTTTGGGCCTGCTGGTGATCCACAGAGGTGCACGGGATCGGAACTCCAGAAGCCATTAAACTCGTTTGGTCTTGCC ACCAGGGAGATCATATATGACACT TGGCCCCTTGCCTAAGAACCGGGCACTACCTTCCGCTACATAAATA CTATGTCAAGGCTAGATTAGCTTGTAGCATGTTATTCTGAATAATTTGCCCCGTCTGGGC ATCATGTGTTTCATTAACCCCGAGAGCATAATAAAAAGGCAGGAAATGGTTGTGAAAAAAAAAA ]
[+] EMBL BI797071 [ TGATGAGCTTGAATTAGTATTAGAAGCCTGTGAAAGGATGTACGCTCATTTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAAGTACTTGGGCGATCAGTTAACGGGACAACATATGCCGGCATCCGAG CAAGGACAACTGGTGCTCCACCAGAACCC CTGGTTTGGGCCTGCTGGTGATCCACAGAGGTGCA GGGATCGGAACTCCAGAAGCCATTAAACTCGTTTGGTCTTGCCAA CAGGGAGATCATATATGACA TGTGGCCCCTTGCCTAAGAACTGGGCACTACCTTCCGCTACATAAATATCTATGTCAAGGCTAGATTAGCTTGTAGCGTGTTATTCTGAATAATTTGCCCCGTCTGGGCAATCATGTGTTTCATTAACCCCGAGAGCATAAT AAAAGGCAGGAAATGGTTGTGAAAAAAAAAA ]
[+] EMBL BE230326 [ ATTAGAAGCCTGTGAAAGGATGAACGCTCATCTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAAGTACTTGGGCGATCAGTTAACGGGACAACATATGCCGGCATCCGAG CAAGGACAACTGGTGCTCCA CAGAACCA CTGGTTTGGGCCTGCTGGTGATCCA AGAGGTGCA GGGATCGGAACTCCAGAAGCCATTAAACTCGTTTGGTCTTGCC A CAGGGAGATCATATATGACA T TGGCCCCTTGCCTAAGAACCGGGCACTACCTTCCGCTACATAAATA CTATGTCAAGGCTAGATTAGCTTGTAGCATGTTATTCTGAATAATTTGCCCCGTCTGGGCAATCATGTGTTTCATTAACCCCGAGAGCATAATAAAAAGGCAGGAAATG ]
consensusID : consensus_13791#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 954 fasta sequence
[ACACGAGACCGTACCGTGGAAGGAAGAGAGCGAGGCGAGGACACCACTCCGCTCCGCTCCACCGTCGGGTCGCCGCGCCGTGCGCGGCCCGAGCTCGCCGATCGAGAGCCATGAGCCTCATCCTTTCCCGGCGGCGCCTCGCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTCCAGGTGGTTGCACACGCCGCCATTCGTGACGGTGTCTCCTCAGGAGATTTCAGGTTCGAGCCCGGCGGAAGTTCAGAATTTTGTGCAGGGCAGCTGGACAACATGTGGTAACTGGAATTGGCTAGTTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCACGAAGCAGAAATTAAGCCATTTGTAGAGAGTTTATCTAATTGCCCAAAGCATGGACTTCACAACCCACTTAAAGCTCCAGAGAGGTATCTCATGTATGGAGATATATCTGCCAAAGCTGCAAACATGCTTGGACAACCTGTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTATCTTCAAAGAGCTATCAGCAGGCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTGGAGAACTTCTGTGGAGATCAGGTACGCTTTCTGGCTCGATCATTTGCTGTACCTGGCAACCATTTTTTACAAAGCAGTAATGGTTACCGGTGGCCATATGGTCCGGTTGGAATTATTACACCCGGTCATTTTCCCATTGAAGATCCATTACTGGAACTAATGGGAGCCCTGTTTATGGGGAATAAACCTGTCCTAAAGGTGCCGGAAAGTTTGTATTGTGGTGGAACCAGAGGCTTAGGTGCTTCACACATTTGGGATGCCGCAGACGGAGTGGCCTTCATCAATTTGGTGGGTTAACAATGACCAACGGTGGTGGAGGCAAAATTGGAATGGACCCTTTAACTGGGAGCTACGGATTGGAAGAAAT]
[+] EMBL BE040067 [ACACGAGACCGTACCGTGGAAGGAAGAGAGCGAGGCGAGGACACCACTCCGCTCCGCTCCACCGTCGGGTCGCCGCGCCGTGCGCGGCCCGAGCTCGCCGATCGAGAGCCATGAGCCTCATCCTTTCCCGGCGGCGCCTCGCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTCCAGGTGGTTGCACACGCCGCCATTCGTGACGGTGTCTCCTCAGGAGATTTCAGGTTCGAGCCCGGCGGAAGTTCAGAATTTTGTGCAGGGCAGCTGGACAACATGTGGTAACTGGAATTGGCTAGTTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCACGAAGCAGAAATTAAGCCATTTGTAGAGAGTTTATCTAATTGCCCAAAGCATGGACTTCACAACCCACTTAAAGCTCCAGAGAGGTATCTCATGTATGGAGATATATCTGCCAAAGCTGCAAACATGCTTGGACAACCTGTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTATCTTCAAAGAGCTATCAGCAGGCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTGGAGAACTTCTGTGGAGATCAGGTACGCTTTCTGGCTCGATCATTTGCTGTACCTGGCAACCATTTTTTACAAAGCAGTAATGGTTACCGGTGGCCATATGGTCCGGTTGGAATTATTACACCCGGTCATTTTCCCATTGAAGATCCATTACTGGAACTAATGGGAGCCCTGTTTATGGGGAATAAACCTGTCCTAAAGGTGCCGGAAAGTTTGTATTGTGGTGGAACCAGAGGCTTAGGTGCTTCACACATTTGGGATGCCGCAGACGGAGTGGCCTTCATCAATTTGGTGGGTTAACAATGACCAACGGTGGTGGAGGCAAAATTGGAATGGACCCTTTAACTGGGAGCTACGGATTGGAAGAAAT]
consensusID : consensus_13791#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 799 fasta sequence
[ATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGTTTTGACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTGCGACCAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTATTCATGCACAAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGGAAGCTTGAAGACTTGACCATTGGCCCAGTCCTTACTGTTACAACATCAAGCATGATAGAGCACATGAAAAACCTTCTCAAAATACCAGGATCAAAGGTCCTGTTTGGTGGTGAACCTCTGGAGAACCATTCTATCCCAGAAATATATGGTGCCTTCAAACCAACTGCTGTATTTGTTCCTCTATCGGAAATCCTTAAAAGTGGCAATTTTGAGCTTGTGACAAGGGAGATCTTTGGTCCTTTCCAGGTGGTTACAGAGTATTCTGATGATGAGCTTGAATTATTATTAGCAGCCTGTGAAAAGATGAACGCTCATCTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAATTACTTGGGCGATCCATTAACCGGGACAACTATCCTCCCATTCGAACAAGGACACTGCTGCTCACAGAACCACTGGTTGGGCCTCCTGGTATTCAAAGTTCAGGATCTGACTTCCAAACCATAACCCTTTGGTGTGCCACGGAAATATATTTAATTGGCCCTTCCATAACACGGCACCCATCCCCCTCTTTTTAAGCNTANTANNATCNNTATTTATTTTCCCT]
[+] EMBL CA753328 [ATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGTTTTGACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTGCGACCAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTATTCATGCACAAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGGAAGCTTGAAGACTTGACCATTGGCCCAGTCCTTACTGTTACAACATCAAGCATGATAGAGCACATGAAAAACCTTCTCAAAATACCAGGATCAAAGGTCCTGTTTGGTGGTGAACCTCTGGAGAACCATTCTATCCCAGAAATATATGGTGCCTTCAAACCAACTGCTGTATTTGTTCCTCTATCGGAAATCCTTAAAAGTGGCAATTTTGAGCTTGTGACAAGGGAGATCTTTGGTCCTTTCCAGGTGGTTACAGAGTATTCTGATGATGAGCTTGAATTATTATTAGCAGCCTGTGAAAAGATGAACGCTCATCTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAATTACTTGGGCGATCCATTAACCGGGACAACTATCCTCCCATTCGAACAAGGACACTGCTGCTCACAGAACCACTGGTTGGGCCTCCTGGTATTCAAAGTTCAGGATCTGACTTCCAAACCATAACCCTTTGGTGTGCCACGGAAATATATTTAATTGGCCCTTCCATAACACGGCACCCATCCCCCTCTTTTTAAGCNTANTANNATCNNTATTTATTTTCCCT]
consensusID : consensus_13791#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 700 fasta sequence
[CGAGGCAAGCTGCTGTTAGAGGCAAATCCGAAAATGACCCTCTTCACTGGGAGCTCACGGATAGCAGAGAAATTGGCTGCTGATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGTTTTGACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTGCGACCAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTATTCATGCACAAGGTAATAGTGAAGATTAGTATTATGTTCCTTCTTTGCTTGAGTCTTTGACTGTGATCATGACTCTTGACATATAACTTATGTTACATGCTTCTTTTTTATCTTGATGGTTTGAGCCATTTACTTATGGACAAGGTTATTTATGACTACAGTAGTAACTTATCCAATGATCAACACTAGGTTTAAGACCGACTGTCTTATAATATCGATCCTACTGATTTCAAGACAATAGGTCCAGTGCTCCTGAGAAAAGGAAAATACAATTTGTCTTTCTTTTTTATTTGAGCTTTGGAAGCTAGTTGAGCTTGTGTTACTTTTCATATCTTAATCTGTTGTTTAATTTTCTTAACTTGCAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGGAAGCTTGAAGACTTGACCATTGGCCCAGTCCTTTACTGTACAACATCAAG]
[+] EMBL CF326743 [CGAGGCAAGCTGCTGTTAGAGGCAAATCCGAAAATGACCCTCTTCACTGGGAGCTCACGGATAGCAGAGAAATTGGCTGCTGATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGTTTTGACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTGCGACCAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTATTCATGCACAAGGTAATAGTGAAGATTAGTATTATGTTCCTTCTTTGCTTGAGTCTTTGACTGTGATCATGACTCTTGACATATAACTTATGTTACATGCTTCTTTTTTATCTTGATGGTTTGAGCCATTTACTTATGGACAAGGTTATTTATGACTACAGTAGTAACTTATCCAATGATCAACACTAGGTTTAAGACCGACTGTCTTATAATATCGATCCTACTGATTTCAAGACAATAGGTCCAGTGCTCCTGAGAAAAGGAAAATACAATTTGTCTTTCTTTTTTATTTGAGCTTTGGAAGCTAGTTGAGCTTGTGTTACTTTTCATATCTTAATCTGTTGTTTAATTTTCTTAACTTGCAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGGAAGCTTGAAGACTTGACCATTGGCCCAGTCCTTTACTGTACAACATCAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13791#0 CCATAAATCGAGGACACCCACGCTGCCGCTGCCACTGCACACGCACGCAGCGAGTCGCGA 60
consensus_13791#1 -----------------------------------------------------------A 1
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 CACGAGACCGTACCGTGGAAAGAAGAGAGCGAGGCGAGGACACCACTCCGCTCCGCTCCA 120
consensus_13791#1 CACGAGACCGTACCGTGGAAGGAAGAGAGCGAGGCGAGGACACCACTCCGCTCCGCTCCA 61
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ---CGAGGCAAGCTGCTGTTAGAGGCAAATCCGAAAATGACCCTCTTCACTGGGAGCTCA 57
consensus_13791#0 CCGCCGGGTCGCCGCGCCGCGCGCGGCCCGAGCTCGCCGATCGAGAGCCATGAGCCTCAT 180
consensus_13791#1 CCGTCGGGTCGCCGCGCCGTGCGCGGCCCGAGCTCGCCGATCGAGAGCCATGAGCCTCAT 121
consensus_13791#2 -------------------------ATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGT 35
consensus_13791#3 CGGATAGCAGAGAAATTGGCTGCTGATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGT 117
** *** * * ** ** *
consensus_13791#0 CCTTTCCCGGCGGCGCCTCGCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTC 240
consensus_13791#1 CCTTTCCCGGCGGCGCCTCGCCGCCGCCGTCCGGCGGTCAGGCCCCGCCGCGCTCGCCTC 181
consensus_13791#2 T-TTGACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTG 94
consensus_13791#3 T-TTGACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTG 176
** * ** ** * * * ** * * * * ** * *
consensus_13791#0 CAGGT-GGATGCACACGCCGCCATTCGC--GACGGTGTCTCCTCAGGAAATTTCAGGTTC 297
consensus_13791#1 CAGGT-GGTTGCACACGCCGCCATTCGT--GACGGTGTCTCCTCAGGAGATTTCAGGTTC 238
consensus_13791#2 CGACCAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTA--TTC 152
consensus_13791#3 CGACCAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTA--TTC 234
* ** *** * ** ** * * ** * *** ***** *** * ***
consensus_13791#0 GAGCCCGGCGGAAGTGCAGAATTTTGTGCAGGGCAGTTGGACAACATCTGG----TAACT 353
consensus_13791#1 GAGCCCGGCGGAAGTTCAGAATTTTGTGCAGGGCAGCTGGACAACATGTGG----TAACT 294
consensus_13791#2 ATGC---ACAAGAATTGGTCGTCTAGTG---GGCTTCTTGATAAAATGAAAAGTCTTTCT 206
consensus_13791#3 ATGCACAAGGTAATAGTGAAGATTAGTATTATGTTCCTTCTTTGCTTGAGTC-TTTGACT 293
** * * ** * * * * **
consensus_13791#0 GGAATTGGCTAG-TTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCAG 412
consensus_13791#1 GGAATTGGCTAG-TTGATCCTTTAAATGGTGAAAAATTTATCAAAGTTGCTGAGGTTCAC 353
consensus_13791#2 GAAAGAAGGAAGCTTGAAGACTTGACCATTGGCCCAGTCCTTACTGTTACAA-----CAT 261
consensus_13791#3 GTGATCATGACTCTTGA-CATATAACTTATGTTACATGCTTCTTTTTTATCTTGATGGTT 352
* * **** * * ** * * **
consensus_13791#0 GAAGCAGAAATAAAGCCATTTGTAGAGAGTT-TATCTAATTGCCCAAAGCATGGACTTCA 471
consensus_13791#1 GAAGCAGAAATTAAGCCATTTGTAGAGAGTT-TATCTAATTGCCCAAAGCATGGACTTCA 412
consensus_13791#2 CAAGCATGA--TAGAGCACATG-AAAAACCT-TCTCAAAATACCAGGATCAAAGGTCCTG 317
consensus_13791#3 TGAGC--CATTTA---CTTATGGACAAGGTTATTTATGACTACAGTAGTAACTTATCCAA 407
*** * * * ** * * * * * * * * *
consensus_13791#0 CAACCCACTTAAAGCTCCAGAG-AGGTATCTCATGTATGGAGATATATCTGCCAAAGCTG 530
consensus_13791#1 CAACCCACTTAAAGCTCCAGAG-AGGTATCTCATGTATGGAGATATATCTGCCAAAGCTG 471
consensus_13791#2 TTTGGTGGT-GAACCTCTGGAG-AACCATTCTAT-CCCAGAAATATATGGTGC----CTT 370
consensus_13791#3 TGATCAACACTAGGTTTAAGACCGACTGTCTTAT-AATATCGATCCTACTGATTTCAAGA 466
* * ** * ** **
consensus_13791#0 CAAACATGCTTGGTCAACCTGTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTAT 590
consensus_13791#1 CAAACATGCTTGGACAACCTGTGGTTTCAGATTTCTTTGCTAAACTTATCCAGAGGGTAT 531
consensus_13791#2 CAAAC---------CAACTGCTGTATTTGTTCCTCTATCGGAAATCCTTAAAAGTGGCAA 421
consensus_13791#3 CAATAGGTCCAGTGCTCCTGAGAAAAGGAAAATACAATTTGTCTTTCTTTTTTATTTGAG 526
*** * * * * * *
consensus_13791#0 CTCCAAAGAGCTATCAGCAAGCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTGGAGA 650
consensus_13791#1 CTTCAAAGAGCTATCAGCAGGCTCTTGCAGAAGTTCAAGTCTCTCAAAAATTCTTGGAGA 591
consensus_13791#2 TTTT---GAGCTTGTGACAAG-----GGAGATCTTTG-GTCCTTTCCAGGTGGTTACAGA 472
consensus_13791#3 CTTTGG-AAGCTAGT--TGAGCTTGTGTTACTTTTCATATCTT----AATCTGTTGTTTA 579
* **** * * ** ** * ** *
consensus_13791#0 ACTTTTGTGGAGATCAGGTACGCTTTCTGGCTCGATCATTTGCTGTACCTGGCAACCATC 710
consensus_13791#1 ACTTCTGTGGAGATCAGGTACGCTTTCTGGCTCGATCATTTGCTGTACCTGGCAACCATT 651
consensus_13791#2 G-TATTCTGATGATGAGCTTGAATTATTA--TTAGCAGCCTGTGAAAA--GATGAACGCT 527
consensus_13791#3 ATTTTCTTAACTTGCAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAAT---GAAAAGTC 636
* * ** * * ** * *
consensus_13791#0 TTGGACAAAGCAGTAATGGTTACCGTTGGCCATATGGTCCGGTTGCAATTATCACACC-G 769
consensus_13791#1 TTTTACAAAGCAGTAATGGTTACCGGTGGCCATATGGTCCGGTTGGAATTATTACACCCG 711
consensus_13791#2 CATCTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAATTACTTGGGCGA 587
consensus_13791#3 TTTCTGAAAGAAGGAAGCTTGAAGACTTGACCATTGGCCCAGTCCT--TTACTGTACAAC 694
* * * * * * * ** * ***
consensus_13791#0 TTCAATTTCCCATTGGAG-ATTCCATTACTGCAACTAATGGGAGCACTGTATATGGGAAA 828
consensus_13791#1 GTCATTTTCCCATTGAAG-AT-CCATTACTGGAACTAATGGGAGCCCTGTTTATGGGGAA 769
consensus_13791#2 TCCATTAACCGGGACAACTATCCTCCCATTCGAAC-AAGGACACTGCTGCTCACAG---- 642
consensus_13791#3 ATCAAG------------------------------------------------------ 700
**
consensus_13791#0 TAAACCTGTCCTCAAAGTTGACAGCAAAGTTAGCATTGTGATGGA-CCAGATGCTTAGGT 887
consensus_13791#1 TAAACCTGTCCTAAAGGT--GCCGGAAAGTTTGTATTGTGGTGGAACCAGAGGCTTAGGT 827
consensus_13791#2 --AACCACTGGTTGGGCC--TCCTGGTATTCAAAGTT----CAGGATCTGACTTCCAAAC 694
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 TGCTTCACGCATGTGGGATGCCA-GCAGAGGATGTGGACTTCATAAATTCTGATGGTATC 946
consensus_13791#1 -GCTTCACACATTTGGGATGCC--GCAGACGGAGTGGCCTTCATCAATT-TGGTGGGTTA 883
consensus_13791#2 --CATAACCC-TTTGGTGTGCCACGGAAATATATTTAATTGGCCCTTCCATAACACGGCA 751
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 ACGATGAACAAGCTGCTGTTAGAGGCAAATCCGAAAATGACCCTCTTCACTGGGAGCTCA 1006
consensus_13791#1 ACAATGACCAA--CGGTGGTGGAGGCAAAATTGGAATGGACCCT-TTAACTGGGAGCT-A 939
consensus_13791#2 CCCATCCCCCTCTTTTTAAGCNTANTANNATCNNTATTTATTTTCCCT------------ 799
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 CGGATAGCAGAGAAATTGGCTGCTGATTTGAAAGGCAAAATCAAATTGGAAGATGCTGGT 1066
consensus_13791#1 CGGATTGGA-AGAAAT-------------------------------------------- 954
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 TTTGACTGGAAAATTCTTGGTCCAGATGTTCAAGAGGTTGATTACATTGCATGGGTTTGC 1126
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 GACCAGGATGCTTATGCTTGCAGTGGTCAGAAGTGCTCTGCTCAGTCTATTCTATTCATG 1186
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 CACAAGAATTGGTCGTCTAGTGGGCTTCTTGATAAAATGAAAAGTCTTTCTGAAAGAAGG 1246
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 AAGCTTGAAGACTTGACCATTGGCCCAGTCCTTACTGTTACAACATCAAGCATGATAGAG 1306
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 CACATGAAAAACCTTCTCAAAATACCAGGATCAAAGGTCCTGTTTGGTGGTGAACCTCTG 1366
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 GAGAACCATTCTATCCCAGAAATATATGGTGCCTTCAAACCAACTGCTGTATTTGTTCCT 1426
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 CTATCGGAAATCCTTAAAAGTGGCAATTTTGAGCTTGTGACAAGGGAGATCTTTGGTCCT 1486
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 TTCCAGGTGGTTACAGAGTATTCTGATGATGAGCTTGAATTAGTATTAGAAGCCTGTGAA 1546
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 AGGATGAACGCTCATCTGACGGCTGCAGTTGTTTCAAACGACCCTTTATTCCTGCAGGAA 1606
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 GTACTTGGGCGATCAGTTAACGGGACAACATATGCCGGCATCCGAGCAAGGACAACTGGT 1666
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 GCTCCACAGAACCACTGGTTTGGGCCTGCTGGTGATCCAAGAGGTGCAGGGATCGGAACT 1726
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 CCAGAAGCCATTAAACTCGTTTGGTCTTGCCACAGGGAGATCATATATGACATTGGCCCC 1786
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 TTGCCTAAGAACCGGGCACTACCTTCCGCTACATAAATACTATGTCAAGGCTAGATTAGC 1846
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 TTGTAGCATGTTATTCTGAATAATTTGCCCCGTCTGGGCAATCATGTGTTTCATTAACCC 1906
consensus_13791#1 ------------------------------------------------------------
consensus_13791#2 ------------------------------------------------------------
consensus_13791#3 ------------------------------------------------------------
consensus_13791#0 CGAGAGCATAATAAAAAGGCAGGAAATGGTTGTGAAAAAAAAAATGAATAAAAA 1960
consensus_13791#1 ------------------------------------------------------
consensus_13791#2 ------------------------------------------------------
consensus_13791#3 ------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||