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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13812#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 3228 fasta sequence
[GCAAGTCAGTTTGACCGAAGAGAAGAGGGGTGGGGCCCAATTGTCAGTGACGCCTGGTTCCATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAATCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGC-GTNTCGATTGGAGTTGGAGACCATCTCGCCGCCGCCGCCGCCGCCGCCTCTTCTTACTGCTGCTTGTAGATGGCGCGGAGCAATTGGGAGGCAGACAAGATGCTGGATGTGTACATCTACGACTACCTGGTGAAGCGCAACATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGATCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTTCGAATGGTGGTCCATCTTCTGGGACATCTTCGATGCAAGAACAAGAGACAAACCACCACAGCCTCAGCCTCAGCCTCCTCCTCCTATTCCGATAGACATCAAATCCAGGGAACAGCAGATGAGGCTCCAGCTACTGCAACAGCAGCAGAATGCCCACCAGCAGCGAAGAGATCCCCCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTACAGCAGCAGCAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGT-GGGTTACCAGTGGCTAGCAACATGAACATTGTACAAAAGAGTTCATTAATTTGCGGTGCAGATGGAACCAGTGGACTTGCTTCATCCTCAAATCAAATGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTCATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTCCTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAGCAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGGCCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGAAGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTACATCATCTTCTGATGGAACTGTTCGACTATGGAATGCAATCGAACGAACTGGTGCTGTACAGACTTTTCATGGGCATAGTTCCCATGTAACCTCTGTAGATTTTCACCCGAAATCTACAGAGGTTCTATGCTCTTGTGACGACAATGGAGAAATTTGTTTCTGGAAAATTGGTCAAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTACATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTA-CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAA---GAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC-TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGA-CCGATT-GTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGATCCGTGATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGGCAGTTTCCGCGCGNCGNCGTCGCCAGCAGCGCCCAGCACACCATCACCACCACCATCACCGGCTGCCTTTCTGCCGCTGCCTCACCATCACCACCATCTTCATCTTCTTTTCTTCTTGTTTGCCCCTCTCTCTCTCTCTCTATATATATAATATATT]
[+] EMBL AU068238 [GCAAGTCAGTTTGACCGAAGAGAAGAGGGGTGGGGCCCAATTGTCAGTGACGCCTGGTTCCATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAATCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGCNGTNTCGATTGGAGTTGGAGACCATCTCGCCGCCGCCGCCGCCGCCGCCTCTTCTTACTGCTGCTTGTAGATGGCGCGGAGCAATTGGGAGGCAGACAAGATGCTGGATGTGTACATCTACGACTACCTGGTGAAGCGCAACATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGATCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTT ]
[+] EMBL AK111575 [ CCATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAATCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGC GATTCGATTGGAGTTGGAGACCATCTCGCCGCCGCCTCCGCCGCCGCCTCTTCTTACTGCTGCTTGTAGATGGCGCGGAGCAATTGGGAGGCAGACAAGATGCTGGATGTGTACATCTACGACTACCTGGTGAAGCGCAACATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGATCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTTCGAATGGTGGTCCATCTTCTGGGACATCTTCGATGCAAGAACAAGAGACAAACCACCACAGCCTCAGCCTCAGCCTCCTCCTCCTATTCCGATAGACATCAAATCCAGGGAACAGCAGATGAGGCTCCAGCTACTGCAACAGCAGCAGAATGCCCACCAGCAGCGAAGAGATCCCCCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCCCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTACAGCAGCAGCAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGT GGGTTACCAGTGGCTAGCAACATGAACATTGTACAAAAGAGTTCATTAATTTGCGGTGCAGATGGAACCAGTGGACTTGCTTCATCCTCAAATCAAATGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTCATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTCCTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAGCAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGGCCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGAAGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTACATCATCTTCTGATGGAACTGTTCGACTATGGAATGCAATCGAACGAACTGGTGCTGTACAGACTTTTCATGGGCATAGTTCCCATGTAACCTCTGTAGATTTTCACCCGAAATCTACAGAGGTTCTATGCTCTTGTGACGACAATGGAGAAATTTGTTTCTGGAAAATTGGTCAAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTTCATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTA CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGGATGGTAGCAAGAAAAC ]
[+] EMBL CB629153 [ CCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAGTTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTA CAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGTGGGGTTACCAGgg ]
[+] EMBL CB629155 [ CCTCTCAATGCTGCTATGGATGCTCTCAACTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAATCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAAACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCTACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACAAAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATCTGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCCTCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAGTTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTA CAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGT GGGTT ]
[+] EMBL CB643920 [ CAGCTGATGGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACAATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCGACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGGTCACCGTCTTATGGAATTACAGCAGCAGCAGCAGCAATTGCAACAGAATACTAGAAAACGGAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTCCCCACCCTCAACTCCTTCCACTCACACACCTGGTGGT GGGTTACCAGTGGCTAGCAACATGAACATTGTACAAAAGAGTTCATTAATTTGCGGTGCAGATGGAACCAGTGGACTTGCTTCATCCTCAAATCAAATGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTCATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTCCTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAGCAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGGCCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGAAGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTACATCATCCTCT ]
[-] EMBL CB629154 [ TGTTTCTGGAAAATTGGTCAAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTACATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTA CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAA GAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAA ]
[-] EMBL CB629156 [ AAAGTAAAGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCAAATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAAGGAGGCAAGTTTGCACTCACTGCCTAAGGTACATACCAATGAGGTAAACTGCATCTGTTGGGATGAAAAGGGTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCATATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTA CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAA GAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATGATTAATAGAAAGAGCAATGGAATTTGAAGAGA ]
[+] EMBL AU068237 [ GGNCGGTAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACTAATACCAGTCTTGCATATTTCATCCAAGATATCCGANTGTTCTGATAGTTGGTGGTTN CCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGANACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTNACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGANTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGANCGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAAaaa ]
[+] EMBL BI809098 [ ATCCGAATGTTCTGATAGTTGGTGGTTACCCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAG AACCCGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAA GAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAGAC AATGAATGACTTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCCATGGAATTTGAAGAGAAAAaaaaaa ]
[-] EMBL AK121155 [ TTTAGACAAATGAATGAC TTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGA CCGATT GTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGATCCGTGATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGG ]
[-] EMBL AU172661 [ ttTTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGA CCGATT GTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGATCCGTGATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGG ]
[-] EMBL C73213 [ ATATGGGATTT AAAATGAATGGTAGCAANAAAACAATTCGTTTCAGATTTTGTCAGGGTCGANACCCTTGAGCACGGAGA CCGAAT GNTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGAACCGTGATGGACTGTGGTGTGNCGGTGCTCATGGCGGAGATGCCGACTTCGCCGANGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTNGCGG ]
[-] EMBL C73352 [ cnCCTTAAGCACGGAGANCCGATTAGTTGTNCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGATCCNTNATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGNAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACNCGTCGCGGCAGTTTCCGCGCGNCGNCGTCGCCAGCAGCGCCCAGCACACCATCACCACCACCATCACCGGCTGCCTTTCTGCCGCTGCCTCACCATCACCACCATCTTCATCTTCTTTTCTTCTTGTTTGCCCCTCTCTCTCTCTCTCTATATATATAATATATT]
consensusID : consensus_13812#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 993 fasta sequence
[ATATGGCTTCACTTATCCTAAAGACAAGTACACTATTTTCCTCTCGCTATTAAGTCACAAAGCATTGACCGCCCTGGTGGTATCAATGTAAATAGCCGAGCACATATTACATGTCTTAAGAAAGTGCTACCTATATTAATTTCTTAGACAAATTGCTCCTCCTCGATAATATGTCTTGTGTGTCCAAAAGACTTTTAACCGTCGGAATGGCAACTGATTGATGGTCTTTGGTGTCATTTGTGCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGCAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGACTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGACCGATTGTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGACCCGTGATGGACTGTGGTGTGGCTGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGG]
[-] EMBL AK111687 [ATATGGCTTCACTTATCCTAAAGACAAGTACACTATTTTCCTCTCGCTATTAAGTCACAAAGCATTGACCGCCCTGGTGGTATCAATGTAAATAGCCGAGCACATATTACATGTCTTAAGAAAGTGCTACCTATATTAATTTCTTAGACAAATTGCTCCTCCTCGATAATATGTCTTGTGTGTCCAAAAGACTTTTAACCGTCGGAATGGCAACTGATTGATGGTCTTTGGTGTCATTTGTGCAGACGATGGAGCTATGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCTTTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAACTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGCCAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTATTTTTGATTCGTTGGCTTCGTTACAGAAGGCAGCCCGTAATTTGTTATTATACTAGTTTAGACAAATGAATGACTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTTGACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATGGAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTATATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTCGAGACCCTTGAGCACGGAGACCGATTGTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTGCTGATCCTGACCCGTGATGGACTGTGGTGTGGCTGTGCTCATGGCGGAGATGCCGACTTCGCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGCGAGGCACTCGTCGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13812#0 GCAAGTCAGTTTGACCGAAGAGAAGAGGGGTGGGGCCCAATTGTCAGTGACGCCTGGTTC 60
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 CATTTCTTCCTCCTTTGTTGTTGGATTCCAGTTCCAGGCGAGGCGAGCGGCAAATCCAAA 120
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 TCGGCACACGAGCGAGACTGCGAGTGCGAGCGCGAGCGCGAGCGCGAGCGTNTCGATTGG 180
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 AGTTGGAGACCATCTCGCCGCCGCCGCCGCCGCCGCCTCTTCTTACTGCTGCTTGTAGAT 240
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 GGCGCGGAGCAATTGGGAGGCAGACAAGATGCTGGATGTGTACATCTACGACTACCTGGT 300
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 GAAGCGCAACATGCACAACACCGCTAAGGCCTTCATGACCGAGGGCAAGGTCGCCACCGA 360
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 TCCCGTGGCCATCGATGCTCCTGGAGGCTTCCTCTTCGAATGGTGGTCCATCTTCTGGGA 420
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 CATCTTCGATGCAAGAACAAGAGACAAACCACCACAGCCTCAGCCTCAGCCTCCTCCTCC 480
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 TATTCCGATAGACATCAAATCCAGGGAACAGCAGATGAGGCTCCAGCTACTGCAACAGCA 540
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 GCAGAATGCCCACCAGCAGCGAAGAGATCCCCCTCTCAATGCTGCTATGGATGCTCTCAA 600
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 CTCTGATGTTTCTGCTGTCCTCGCTTCTAAAATGATGCAAGACCGAATGAGGAACCCCAA 660
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 TCCCACCGATTCCGATGCTTCCCACCAACTCCTGGACGCTAACAGGATTGCTCTCCTCAA 720
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 ACCAGCAACTAACCAAACTGGACAACTGGTTCAGGGTGCCTCGGTCAACATGTCAGCTCT 780
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 ACAGCAGATCCACTCAAGAAACCAGCAACCTGACATGAAAGGTGATGCTGCCATGTCACA 840
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 AAGATCAATGCCTACAGACCCTTCAACTTTGTATGGATCAGGAATGATGCAACCAAAATC 900
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 TGGATTAGTTTCCACTGGATTAAATCAAGGTGTTGGTAGTGTACCACTGAAAGGCTGGCC 960
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 TCTTACAGTCCCAGGTATTGACCAACTCCGGTCAAATTTAGGTGTGCAGAAGCAGTTGAT 1020
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 GGCATCTCCAAACCAATTTCAACTTTTATCGCCACAACAACAATTAATTGCTCAAGCACA 1080
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 ATCACAGAATGACCTTGCTAGAATGGGTTCTCCAGCTCCATCTGGTTCACCAAAGGTTCG 1140
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 ACCAGATGAATCAGATTATATGATGAAGTTGAAGATGGCTCAAATGCAGCAGCCCTCAGG 1200
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 TCACCGTCTTATGGAATTACAGCAGCAGCAGCAGCAATTGCAACAGAATACTAGAAAACG 1260
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 GAAACCAACCTCTTCCGGCGCAGCTAATAGTACAGGCACAGGAAATACTGTTGGCCCTTC 1320
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 CCCACCCTCAACTCCTTCCACTCACACACCTGGTGGTGGGTTACCAGTGGCTAGCAACAT 1380
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 GAACATTGTACAAAAGAGTTCATTAATTTGCGGTGCAGATGGAACCAGTGGACTTGCTTC 1440
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 ATCCTCAAATCAAATGGATAATCTGGATAGTTTTGTTGATTTTGATGAAAACGTTGATTC 1500
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 ATTTTTGTCAAATGATGATGGAGATGGGCGGGACATATTTGCTTCATTGAAGAAAGGGTC 1560
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 CTCAGAGCAGGATTCCTTAAAGGGTCTCTCGTTGAGTGAGTTTGGTAATAACCGTACAAG 1620
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 CAACAATAAGGTTGTTTGCTGTCACTTCTCCACAGATGGGAAATTGCTGGCTAGTGCTGG 1680
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 CCATGAGAAAAAGGTCTTCCTCTGGAATATGGACAATCTTAACATGGATACTAAAATAGA 1740
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 AGAACATACGAACTTTATTACAGATATAAGATTCAAACCGAATTCAACTCAGTTAGCTAC 1800
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 ATCATCTTCTGATGGAACTGTTCGACTATGGAATGCAATCGAACGAACTGGTGCTGTACA 1860
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 GACTTTTCATGGGCATAGTTCCCATGTAACCTCTGTAGATTTTCACCCGAAATCTACAGA 1920
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 GGTTCTATGCTCTTGTGACGACAATGGAGAAATTTGTTTCTGGAAAATTGGTCAAAGTAA 1980
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 AGTTTCACGTATCTCCAGGATGAAACAGGGTGGTACTGGTAGGGTCAGGTTTCAGCCTCA 2040
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 AATTGGACAGCTCCTAGCTGTGGCAACTGGAAGCATTGTGAATATTGTTGATGTTGAAAA 2100
consensus_13812#1 --------------------------------ATATGGCTT-CACTTATCCTAAAGACAA 27
** * * * * * ** **
consensus_13812#0 GGAGGCAAGTTTGCACTCACTGCCTAAGGTACATACCAATGAGGTAAACTGCATCTGTTG 2160
consensus_13812#1 GTACACTATTTTCCTCTCGCTAT-TAAGTCACAAAGCATTGAC-CGCCCTGGTGGTATCA 85
* * * * *** * *** ** **** *** * ** *** *** * *
consensus_13812#0 GGATGAAAAGG-GTGAACGTGTGGCATCTGTAAGTCAGGATACTGTGAAGGTTTGGTCGG 2219
consensus_13812#1 ATGTAAATAGCCGAGCACATATTACATGTCTTAAG-AAAGTGCTACCTATATTAATTTCT 144
* ** ** * * ** * * *** * * * * * ** * ** *
consensus_13812#0 TAGCATCAGGCGCATGCATCCATGAGTTAAGATCTCATGGAAACCAATACCAGTCTTGCA 2279
consensus_13812#1 TAG-ACAAATTGC--TCCTCCTCGA--TAATATGTCTTGTGTGTCCAAAAGACTTTTAAC 199
*** * * ** * *** ** *** ** ** ** * * * * * **
consensus_13812#0 TATTTCATCCAAGATATCCGAATGTTCTGATAGTTGGTGGTTAC-CAGACGATGGAGCTA 2338
consensus_13812#1 CGTCGGAATGGCAACTGATTGATGGTCT--TTGGTGTCATTTGTGCAGACGATGGAGCTA 257
* * * *** *** * * ** ** ***************
consensus_13812#0 TGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCT 2398
consensus_13812#1 TGGAGCTTGTCAGATAATCACAGAAACACGGTCCAGGCACATGAAGGCCTTATAGCTGCT 317
************************************************************
consensus_13812#0 TTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAA 2458
consensus_13812#1 TTGGCGCACTCTCAGTTCACTGGGATGATAGCTTCTGCGAGCCATGACAGATCCGTGAAA 377
************************************************************
consensus_13812#0 CTGTGGAAATGAAGAAGGATTGGAGATGAAGAG---AAGGGGCCTCAGCGCGACGGCTGC 2515
consensus_13812#1 CTGTGGAAATGAAGAAGGATTGGAGATGAAGAGGAGAAGGGGCCTCAGCGCGACGGCTGC 437
********************************* ************************
consensus_13812#0 CAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTAT 2575
consensus_13812#1 CAGAATCTTAACTTGCATAGCTTCCCAGACGTGCGTACGTATAGAGTTTGTGTTGTTTAT 497
************************************************************
consensus_13812#0 TTTTGATTCGTTGGCTTCGTTACAGAAGGTAGCCCGTAATTTGTTATTATACTAGTTTAG 2635
consensus_13812#1 TTTTGATTCGTTGGCTTCGTTACAGAAGGCAGCCCGTAATTTGTTATTATACTAGTTTAG 557
***************************** ******************************
consensus_13812#0 ACAAATGAATGACTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTT 2695
consensus_13812#1 ACAAATGAATGACTTTTTTTACTTTAGGGGTGAGGTGTACATGGTTGGGGCAAAAATGTT 617
************************************************************
consensus_13812#0 GACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATG 2755
consensus_13812#1 GACAATACTAATCTATGTGGAACGTGCTGTGTAAATTAATAATTAATAGAAAGAGCAATG 677
************************************************************
consensus_13812#0 GAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTA 2815
consensus_13812#1 GAATTTGAAGAGAAAACATGAATTATTCCATGTGTGTGTGTGTGTAGTGCAGTGTATGTA 737
************************************************************
consensus_13812#0 TATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTC 2875
consensus_13812#1 TATGGGATTTGAAAATGAATGGTAGCAAGAAAACAATTCGTTTCAGATTTTGTCAGGGTC 797
************************************************************
consensus_13812#0 GAGACCCTTGAGCACGGAGACCGATTGTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTG 2935
consensus_13812#1 GAGACCCTTGAGCACGGAGACCGATTGTTGTGCTTGTTGCTGCTGCTGTGATGGATGCTG 857
************************************************************
consensus_13812#0 CTGATCCTGATCCGTGATGGACTGTGGTGTGGCGGTGCTCATGGCGGAGATGCCGACTTC 2995
consensus_13812#1 CTGATCCTGACCCGTGATGGACTGTGGTGTGGCTGTGCTCATGGCGGAGATGCCGACTTC 917
********** ********************** **************************
consensus_13812#0 GCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGC 3055
consensus_13812#1 GCCGAGGCAGGCGCTGTTGCAGGAGAGGTGGCAGATGATGGCCCAACCTTGGCACCCGGC 977
************************************************************
consensus_13812#0 GAGGCACTCGTCGCGGCAGTTTCCGCGCGNCGNCGTCGCCAGCAGCGCCCAGCACACCAT 3115
consensus_13812#1 GAGGCACTCGTCGCGG-------------------------------------------- 993
****************
consensus_13812#0 CACCACCACCATCACCGGCTGCCTTTCTGCCGCTGCCTCACCATCACCACCATCTTCATC 3175
consensus_13812#1 ------------------------------------------------------------
consensus_13812#0 TTCTTTTCTTCTTGTTTGCCCCTCTCTCTCTCTCTCTATATATATAATATATT 3228
consensus_13812#1 -----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||