These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13814#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1924 fasta sequence [AAAAACTAAAAAAGAAGAGAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCCTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCA-AAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA-TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTACTTATATGGTAACTTATTTTAAGGGTGTGTTTAGTTCACGCTAAAATTGGAAGTTTGGTTGAAATTGGAACGATGTGATGGAAAAGTTGGAAGTTTAAAGAAATAA] [+] EMBL CB618213 [AAAAACTAAAAAAGAAGAGAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACTACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCTGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCCTCTAGAGGCCGTGCTTCTGCTGCCGCTGCGGCTGCGATGTGGAGGACAGGGAGCTCGGGCGGTGGGCCTACTTCTGCCCGGCGACTCCGAAATGCAATTATTCTGTTTGGTGTGGAGATTCTGATATTTGTCCCAATCCACAGCCTGCTTATATGAGCCCTCCTATACCGCATCCTCTTGTTTTTAGCCCCCCTTGCAGTCC ] [+] EMBL CB622577 [ TAAAAAAGCATTGAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCCTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCTAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCGCAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCAAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCT ] [+] EMBL AK105999 [ GAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCTTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCA AAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCACCAAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCGCCACCTCATGGTAGCGGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTA ] [+] EMBL AK105736 [ CGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCTTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCA AAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCACCAAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCGCCACCTCATGGTAGCGGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTA ] [+] EMBL CB619653 [ CATGGGAGGCGCCGCCGGCCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGNCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGCGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCCTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCAAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTACCAATCATT ] [+] EMBL CF322720 [ CGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCGTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCANAAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCA ] [+] EMBL BP184934 [ acgaggGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCA AAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACATTCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATA ] [-] EMBL CB619655 [ atTACAGTCCAGTTAAAGGGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGATGAGCCTACACTAAGAGATGGTATAGTTGTTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGATTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTGGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGGTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGTTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGTTATAGTATTGGGCACCTGATAATACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATATGCTTTGTTAATCACTTAGGACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTAAGGGGGCCTATAAAGATGT ] [-] EMBL CB619654 [ GGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTAAGGCGCCTATAAAGATGTATCAA ] [-] EMBL CB622578 [ GGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTACTTAaaaaaaaga ] [-] EMBL CB618214 [ CCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTACTTATATGGTAACTTATTTTAAGGGTGTGTTTAGTTCACGCTAAAATTGGAAGTTTGGTTGAAATTGGAACGATGTGATGGAAAAGTTGGAAGTTTAAAGAAATAA] [-] EMBL CB637573 [ CCATTATGCCGCCACCTCATGGTAGCGGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTAC ] [+] EMBL BP184935 [ TAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTACTTATATGGTAACTTATTTTAAGGGTGTGTTTAGTTCACGCTAAAAaaaaaaa ] consensusID : consensus_13814#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 371 fasta sequence [AGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCCCGCCACCTCCACGCTACGGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACCCGCCGTGAGGCGCCACTGATTCCCCCGGCGACGCGGTGAGTGGATGACGACGAGGTCGAGACGAGGACGAGGACGACTTCCTTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCATACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTTTCGAGAGCGGCATTGCGCCGCTTTAGAGATCCA] [+] EMBL BI795518 [AGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCCCGCCACCTCCACGCTACGGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACCCGCCGTGAGGCGCCACTGATTCCCCCGGCGACGCGGTGAGTGGATGACGACGAGGTCGAGACGAGGACGAGGACGACTTCCTTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCATACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTTTCGAGAGCGGCATTGCGCCGCTTTAGAGATCCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13814#0 AAAAACTAAAAAAGAAGAGAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGG 60 consensus_13814#1 -----------------------------------AGAGAGAGGGGGGCGGCGCCGCCGG 25 ************************* consensus_13814#0 CGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGC 120 consensus_13814#1 CGACAGAGCCGCGACATGTGAGGC-CCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGC 84 ************************ *********************************** consensus_13814#0 AGCGCCGCCACCTCCAC-CTACG-CGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCG 178 consensus_13814#1 AGC-CCGCCACCTCCACGCTACGGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCG 143 *** ************* ***** ************************************ consensus_13814#0 CCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACG 238 consensus_13814#1 CCACCCCCAGGCCCCCCCAC-CCGCCGTGAGGCGCCACT--GATT---CCCCCGGCGACG 197 ******************** ***************** ** * ** ********* consensus_13814#0 GCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCG 298 consensus_13814#1 -CGGTGAG-TGGATGACGACGAGGTCGAG-ACGAGGACGAGGACGACTTCCT-TTCCGCG 253 ******* ******************** ********************** ******* consensus_13814#0 CCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCC 358 consensus_13814#1 CCGCGGAGGAGACGGAGCGGAGCCA-TACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCC 312 ************************* ********************************** consensus_13814#0 CGCCGCCGTCTCAGCCCCCGGCTTTCCTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCT 418 consensus_13814#1 CGCCGCCGTCTCAGCCCCCGGCTTTT-TCGAGAG--CGGCATTGCGCCGCTTTAGAGATC 369 ************************* ******* ** * ** ** * * consensus_13814#0 GCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAAT 478 consensus_13814#1 CA---------------------------------------------------------- 371 consensus_13814#0 GCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATA 538 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 TGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCA 598 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 ACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTT 658 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 TTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTA 718 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 CAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCA 778 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 ACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTT 838 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 CTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGA 898 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 CAATAAAAGGGCAAAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTT 958 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 ACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCAT 1018 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 TGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGAT 1078 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 CAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACATCGTCAACAATGATG 1138 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 TTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTG 1198 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 GGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAA 1258 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 AATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACC 1318 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 CCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGA 1378 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 GCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCC 1438 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 CTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAA 1498 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 TGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATT 1558 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 GACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTAT 1618 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 AGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGG 1678 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 TGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGT 1738 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 TAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAA 1798 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 GATGTATCAATATATACTTACTTATATGGTAACTTATTTTAAGGGTGTGTTTAGTTCACG 1858 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 CTAAAATTGGAAGTTTGGTTGAAATTGGAACGATGTGATGGAAAAGTTGGAAGTTTAAAG 1918 consensus_13814#1 ------------------------------------------------------------ consensus_13814#0 AAATAA 1924 consensus_13814#1 ------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||