cluster # 13814

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Oryza sativa
cluster # 13814 cluster # 13814 Sequences # 14 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13814#0 length = 1924 sequences # 13

consensus_13814#1 length = 371 sequences # 1

consensusID : consensus_13814#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1924
fasta sequence

                              [AAAAACTAAAAAAGAAGAGAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCCTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCA-AAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA-TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTACTTATATGGTAACTTATTTTAAGGGTGTGTTTAGTTCACGCTAAAATTGGAAGTTTGGTTGAAATTGGAACGATGTGATGGAAAAGTTGGAAGTTTAAAGAAATAA]

[+] EMBL CB618213             [AAAAACTAAAAAAGAAGAGAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACTACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCTGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCCTCTAGAGGCCGTGCTTCTGCTGCCGCTGCGGCTGCGATGTGGAGGACAGGGAGCTCGGGCGGTGGGCCTACTTCTGCCCGGCGACTCCGAAATGCAATTATTCTGTTTGGTGTGGAGATTCTGATATTTGTCCCAATCCACAGCCTGCTTATATGAGCCCTCCTATACCGCATCCTCTTGTTTTTAGCCCCCCTTGCAGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB622577             [      TAAAAAAGCATTGAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCCTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCTAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCGCAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCAAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK105999             [                  GAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCTTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCA AAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCACCAAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCGCCACCTCATGGTAGCGGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTA                                                                                                          ]
[+] EMBL AK105736             [                           CGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCTTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCA AAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCACCAAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCGCCACCTCATGGTAGCGGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTA                                                                                                          ]
[+] EMBL CB619653             [                                                                          CATGGGAGGCGCCGCCGGCCGCCGGAGCGAGCGAGCGATGAGCAGCAGCGCCGCCACCTCCACCTACGCGGAGAGCGNCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACGCCGCCGCGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTCCTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCAAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTACCAATCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF322720             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGAAATGCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTTTTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCGTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCANAAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BP184934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        acgaggGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTTCTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACAATAAAAGGGCA AAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACATTCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB619655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             atTACAGTCCAGTTAAAGGGGAGGCGAACAATGACAACGGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGATGAGCCTACACTAAGAGATGGTATAGTTGTTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGATTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTGGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGGTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGTTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGTTATAGTATTGGGCACCTGATAATACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATATGCTTTGTTAATCACTTAGGACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTAAGGGGGCCTATAAAGATGT                                                                                                                         ]
[-] EMBL CB619654             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTAAGGCGCCTATAAAGATGTATCAA                                                                                                                    ]
[-] EMBL CB622578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGATCAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTACTTAaaaaaaaga                                                                                             ]
[-] EMBL CB618214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTGATCAACCTGAATACGATGAGTGGCCATTTGACA TCGTCAACAATGATGTTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTACTTATATGGTAACTTATTTTAAGGGTGTGTTTAGTTCACGCTAAAATTGGAAGTTTGGTTGAAATTGGAACGATGTGATGGAAAAGTTGGAAGTTTAAAGAAATAA]
[-] EMBL CB637573             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCATTATGCCGCCACCTCATGGTAGCGGGAGCCCCTTCACTCCTCGGTCGAACCCCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTAC                                                                                                         ]
[+] EMBL BP184935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAAGTTAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGATGTATCAATATATACTTACTTATATGGTAACTTATTTTAAGGGTGTGTTTAGTTCACGCTAAAAaaaaaaa                                                     ]




>consensus_13814#0
AAAAACTAAAAAAGAAGAGAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGG
CGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGC
AGCGCCGCCACCTCCACCTACGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCC
ACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACGGC
GGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCGCC
GCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCG
CCGCCGTCTCAGCCCCCGGCTTTCCTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCTGC
GATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAATGC
AAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATATG
AGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCAAC
AGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTTTT
AATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTACA
ACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCAAC
AGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTTCT
AGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGACA
ATAAAAGGGCAAAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTTAC
CAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCATTG
GAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGATCA
ATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACATCGTCAACAATGATGTT
GTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTGGG
GAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAAAA
TCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACCCC
TGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGAGC
CCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCCCT
GGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAATG
TGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATTGA
CTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTATAG
TATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGGTG
TTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGTTA
GGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAAGA
TGTATCAATATATACTTACTTATATGGTAACTTATTTTAAGGGTGTGTTTAGTTCACGCT
AAAATTGGAAGTTTGGTTGAAATTGGAACGATGTGATGGAAAAGTTGGAAGTTTAAAGAA
ATAA

consensusID : consensus_13814#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 371
fasta sequence

                              [AGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCCCGCCACCTCCACGCTACGGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACCCGCCGTGAGGCGCCACTGATTCCCCCGGCGACGCGGTGAGTGGATGACGACGAGGTCGAGACGAGGACGAGGACGACTTCCTTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCATACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTTTCGAGAGCGGCATTGCGCCGCTTTAGAGATCCA]

[+] EMBL BI795518             [AGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGCAGCCCGCCACCTCCACGCTACGGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACCCGCCGTGAGGCGCCACTGATTCCCCCGGCGACGCGGTGAGTGGATGACGACGAGGTCGAGACGAGGACGAGGACGACTTCCTTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCATACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTTTCGAGAGCGGCATTGCGCCGCTTTAGAGATCCA]




>consensus_13814#1
AGAGAGAGGGGGGCGGCGCCGCCGGCGACAGAGCCGCGACATGTGAGGCCCGCCGGTCGC
CGGAGCGAGCGAGCGATGAGCAGCAGCCCGCCACCTCCACGCTACGGCGGAGAGCGTCGC
GTCCTGCCGCGCTCCCGCTCCCGCCACCCCCAGGCCCCCCCACCCGCCGTGAGGCGCCAC
TGATTCCCCCGGCGACGCGGTGAGTGGATGACGACGAGGTCGAGACGAGGACGAGGACGA
CTTCCTTTCCGCGCCGCGGAGGAGACGGAGCGGAGCCATACGAGGCCCAGCGCCGCGCTT
CCGCACCTCCCCCGCCGCCGTCTCAGCCCCCGGCTTTTTCGAGAGCGGCATTGCGCCGCT
TTAGAGATCCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13814#0      AAAAACTAAAAAAGAAGAGAAAAACAACGAAAGAGAGAGAGAGGGGGGCGGCGCCGCCGG 60
consensus_13814#1      -----------------------------------AGAGAGAGGGGGGCGGCGCCGCCGG 25
                                                          *************************

consensus_13814#0      CGACAGAGCCGCGACATGTGAGGCGCCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGC 120
consensus_13814#1      CGACAGAGCCGCGACATGTGAGGC-CCGCCGGTCGCCGGAGCGAGCGAGCGATGAGCAGC 84
                       ************************ ***********************************

consensus_13814#0      AGCGCCGCCACCTCCAC-CTACG-CGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCG 178
consensus_13814#1      AGC-CCGCCACCTCCACGCTACGGCGGAGAGCGTCGCGTCCTGCCGCGCTCCCGCTCCCG 143
                       *** ************* ***** ************************************

consensus_13814#0      CCACCCCCAGGCCCCCCCACGCCGCCGTGAGGCGCCACCTCGACTTCGCCGCCGGCGACG 238
consensus_13814#1      CCACCCCCAGGCCCCCCCAC-CCGCCGTGAGGCGCCACT--GATT---CCCCCGGCGACG 197
                       ******************** *****************   ** *   ** *********

consensus_13814#0      GCGGTGAGCTGGATGACGACGAGGTCGAGGACGAGGACGAGGACGACTTCCTCTTCCGCG 298
consensus_13814#1      -CGGTGAG-TGGATGACGACGAGGTCGAG-ACGAGGACGAGGACGACTTCCT-TTCCGCG 253
                        ******* ******************** ********************** *******

consensus_13814#0      CCGCGGAGGAGACGGAGCGGAGCCACTACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCC 358
consensus_13814#1      CCGCGGAGGAGACGGAGCGGAGCCA-TACGAGGCCCAGCGCCGCGCTTCCGCACCTCCCC 312
                       ************************* **********************************

consensus_13814#0      CGCCGCCGTCTCAGCCCCCGGCTTTCCTCGAGAGGCCGTGCATCTGCGGCCGCGGCGGCT 418
consensus_13814#1      CGCCGCCGTCTCAGCCCCCGGCTTTT-TCGAGAG--CGGCATTGCGCCGCTTTAGAGATC 369
                       *************************  *******  **    *  ** **    * *   

consensus_13814#0      GCGATGTGGAGGAGAGGGAGCTCGGGCGGTGGGCCTACGTCTGCCCGGCGACTCCGAAAT 478
consensus_13814#1      CA---------------------------------------------------------- 371
                                                                                   

consensus_13814#0      GCAAATATTCTGTTTGGTGTGGAGAAGCTGATATTTGTCCAAATCCACAGCCTGCTTATA 538
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      TGAGCCATCCTAAACCAAATCCTCATGTTTTTAGCAGCCCATGCAGTCCTGTTGTGTTCA 598
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      ACAGTCCTAGCAATCATTTAGCTGGTTCTACAACTCCTACACCGAACAATCTCCAAGTTT 658
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      TTAATGGTCCAAGAAACCCTCATGTGTCCAACAGTCCTAGCAATCATTTAGCTGGTTCTA 718
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      CAACTCCTACACCAAACAATCTCCAAGTTTTTAATGCTCCAGGAAACCTTCATGTGTCCA 778
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      ACAGTCCAAACAATCATCGATCTGGTGCTACAACTCCAGTTAACGCTAATCCCCCTGGTT 838
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      CTAGATCAAGTGATAAACAACCAATCTGCCATTGTAGGGCTGGAAAATGCAAAGTGGAGA 898
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      CAATAAAAGGGCAAAAGTACTATGTGTGTTGTATACAGAAGGGACAAGGTGCATGCCCTT 958
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      ACCAAGTGCCGGTCAATGCTTTTGTTGAAGAATCACCACAAGCTGGAAACAGCGTTCCAT 1018
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      TGGAGGATAACCGTGGGAACTACAGTCCAGTTAAAGTGGAGGCGAACAATGACAACGGAT 1078
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      CAATCAATCCTGATCAACCTGAATACGATGAGTGGCCATTTGACATCGTCAACAATGATG 1138
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      TTGTATGCAGTGGCTTCTTGCCAACTGCTGAGCCTACACTAAGAGATGGTATAGTTGCTG 1198
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      GGGAATCGCCGAGTACGCAGCACCTGTCAAATGCTACGACTGAAGCGAAAACACCAACAA 1258
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      AATCGCCCATTATGCCACCACCTCATGGTAGCAGGAGCCCCTTCACTCCTCGGTCGAACC 1318
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      CCTGCTACCGATGTGGTGAAGACGGGCACTGGTCCAGGAACTGCCCTAAGCCGGCTTCGA 1378
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      GCCCACTTAACTCTCCTTGCTACAACTGCGGCAAGCTTGGGCACTGGAGAGGTAATTGCC 1438
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      CTGGAACTTGATGACACAAGAGGGGTGTTAAGAAGCATATGATCGGTATCATTTTGGCAA 1498
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      TGTGACAGGACCATCAGAAGCTAGGCTTAATGAGTAATGGCCTACTTCTGCTTAATGATT 1558
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      GACTCTCCCATGGCTGCCATGTAAATAGGTTTAGGGTTTAGGGTTTATGCAATATGCTAT 1618
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      AGTATTGGGCACCTGATACTACTTGTGGTGTCTGTGGCAGCAAGAGGTGGGCTCCTACGG 1678
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      TGTTTGTCCATCATCTGCTTTGTTAATCACTTCTTACATGAAGTAACCCCAGGATTAAGT 1738
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      TAGGTCGTAATTGGAACCTTCTGTTTATGGATCATGTATGGTATTTATGTCGCCTATAAA 1798
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      GATGTATCAATATATACTTACTTATATGGTAACTTATTTTAAGGGTGTGTTTAGTTCACG 1858
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      CTAAAATTGGAAGTTTGGTTGAAATTGGAACGATGTGATGGAAAAGTTGGAAGTTTAAAG 1918
consensus_13814#1      ------------------------------------------------------------
                                                                                   

consensus_13814#0      AAATAA 1924
consensus_13814#1      ------