cluster # 13819

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Oryza sativa
cluster # 13819 cluster # 13819 Sequences # 14 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13819#0 length = 1701 sequences # 13

consensus_13819#1 length = 366 sequences # 1

consensusID : consensus_13819#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1701
fasta sequence

                              [TCTCTCTCCTCCAATTCCTCCAATCCCAAATTCCACCCTCCTCTTGCCAATTACCCCCCTCCTCCTCCTCCTCCCCCACGACTCCCAAAATCCCCTCCTCCACCCCCTCCGCATCTCCCCATGTCGTCGTCGCCTCCTCCACCCCTCGCAGCCGCGCGTGCAACAGCGGGACCAGCACACGCCGCCACTGCCCCCGGCCCCGCATGGGAACGGCATGGTGCGCGCCGGAGGAGGAGGAGGAGGAGGAGGCGCGCACGTGCGGCTCATGTGCAGCTTCGGGGGACGCATCCTGCCGC-GCCC-GGGCGACCACCAGCTCCGCTACGTCGGCGGGGAGACCCGCATCGTGTCCGTCCCGCGGGCGGCGACGTTCGACGCCCTCGTCGCGGCGCTGGCCAAGGTCGCCCCCGCGCTCTTCCCGGCGGGCGGGCCATCCCCGGCGCTCAGGTACCAGCTCCCCCAGGACGACCTCGACGCGCTCATCTCCATCACCTCCGACGACGACGTGGACAACCTCATCGAGGAGATCGACCGGTTCCAGGGCCTCGCCGCCGCCTCCATCAAGCCGCCACGCCTCCGCCTCTTCCTCTTCGCCTCCTCGCCCGCCGACCACGCCTCCGCGGCCGCCTTCGGCTCCGTCCTCTCCGGCGCCGGCGGCGACTCCTCCTCCGACCAGTGGTTCGTCGACGCGCTCAACGCCCCCGCGCCTGCCCCCATCGAGCGCGGCCGATCCGAGGCCTCGTCGATCATCTCCGAGGTCCCCGACTACCTCTTCGGCCTCGACACCACCTCCGACGAACCCAGCCCTGGTCCCGGAGGAGCCCGCCCCAAGGTCGACACGGAGATGGCCCACGTCGAGGACGACGCGCCGGTTCTCTCGCGGGGGACGCCGCCTGCCCCGTACGTCACCGAGAGCGCGCCATGGCCGGCCCCGCCGCCGCCGTACA-TGACGCAGCAGGTG-TACTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGGCGGATACATGCCGGGTCCAGTCTACCACATTGTCGGTGGCGGAGGAAGCGAGGCGCGGGGAGATCTCTACTCCACCGGGGGCAGTGTCTCCGCCGCCGCCGGCG-TCGG-CGGCG-TC-TAC-GGCG-TCCCGCACCCCAT-GCAGCCGTTCCCGCCGAT-GATGTACGGG-CACGCGCCGCCGCCCGGCG-CGGTGG-TCTACTCG-TCGGA-GGGGAAGCCGCCGATGGAAGGTGGGGCCCACGCCTCGTAGGCCCCGCAAGTGGAGAGGAGGGAGGGAG-GCAGAGCA-CGGCGCGGATGAGCTGTTTCCCTGGAGGAGCTGGTCCTGAGCTCTTCCATCCTCGTGATTGCATATGCCTTATTCTACTAAGGATTTTTGCATTGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTATAGATGAGGGAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAAAATAGATTTGCTATAGTTATTATATTTATAATAATATA-TTATATAAGAGTAAGTACATCTGGTGTGATTAAGTAGTAGCAAGTTAATGTAATATGGGATTCATATGTTCTATGTGGTTCCTACCTGAGGAAGTCAAAATTTTGTGTGCTGCTGGATGCTTGAGGGATTAAAATGTAAACAATTCCTGTGCTTACCTTAAAAGG]

[+] EMBL BI799714             [TCTCTCTCCTCCAATTCCTCCAATCCCAAATTCCACCCTCCTCTTGCCAATTACCCCCCTCCTCCTCCTCCTCCCCCACGACTCCCAAAATCCCCTCCTCCACCCCCTCCGCATCTCCCCATGTCGTCGTCGCCTCCTCCACCCCTCGCAGCCGCGCGTGCAACAGCGGGACCAGCACACGCCGCCACTGCCCCCGGCCCCGCATGGGAACGGCATGGTGCGCGCCGGAGGAGGAGGAGGAGGAGGAGGCGCGCACGTGCGGCTCATGTGCAGCTTC GGGGACGCATCCTGCCGCAGCCCAGGGCGACCACCAGCTCCG TACGTCGGCGGGGAGACCCGCATCGTGTCCGTCCCGCGGGCGGCGACGTTCGACGCCCTCGTCGCGGCGCT GCCAA GTCGCCCCCGCGCTCTTCCCGGC GGCGGCCCATCCCCGGCGCTCAGGTACCAGCTCCCCCAGGACGACCTCGACGCGCTCATCTCCATCACCTCCGACGACGACGTGGACAACCTCATCGAGGAGATCGACCGGTTCCAGGGCCTCGCC CCGCCTCCATCAAGCCGCCACGCCTCCGCCTCTTCCTCTTCGCCTCCTCGCCCGCCGACCACGCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK109557             [                                                                                                                                                                                                                                                     GAGGCGCGCACGTGCGGCTCATGTGCAGCTTCGGGGGACGCATCCTGCCGC GCCC GGGCGACCACCAGCTCCGCTACGTCGGCGGGGAGACCCGCATCGTGTCCGTCCCGCGGGCGGCGACGTTCGACGCCCTCGTCGCGGCGCTGGCCAAGGTCGCCCCCGCGCTCTTCCCGGCGGGCGGGCCATCCCCGGCGCTCAGGTACCAGCTCCCCCAGGACGACCTCGACGCGCTCATCTCCATCACCTCCGACGACGACGTGGACAACCTCATCGAGGAGATCGACCGGTTCCAGGGCCTCGCCGCCGCCTCCATCAAGCCGCCACGCCTCCGCCTCTTCCTCTTCGCCTCCTCGCCCGCCGACCACGCCTCCGCGGCCGCCTTCGGCTCCGTCCTCTCCGGCGCCGGCGGCGACTCCTCCTCCGACCAGTGGTTCGTCGACGCGCTCAACGCCCCCGCGCCTGCCCCCATCGAGCGCGGCCGATCCGAGGCCTCGTCGATCATCTCCGAGGTCCCCGACTACCTCTTCGGCCTCGACACCACCTCCGACGAACCCAGCCCTGGTCCCGGAGGAGCCCGCCCCAAGGTCGACACGGAGATGGCCCACGTCGAGGACGACGCGCCGGTTCTCTCGCGGGGGACGCCGCCTGCCCCGTACGTCACCGAGAGCGCGCCATGGCCGGCCCCGCCGCCGCCGTACA TGACGCAGCAGGTG TACTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGGCGGATACATGCCGGGTCCAGTCTACCACATTGTCGGTGGCGGAGGAAGCGAGGCGCGGGGAGATCTCTACTCCACCGGGGGCAGTGTCTCCGCCGCCGCCGGCG TCGG CGGCG TC TAC GGCG TCCCGCACCCCAT GCAGCCGTTCCCGCCGAT GATGTACGGG CACGCGCCGCCGCCCGGCG CGGTGG TCTACTCG TCGGA GGGGAAGCCGCCGATGGAAGGTGGGGCCCACGCTTCGTAGGCCCCGCAAGTGGAGAGGAGGGAGGGAG GCAGAGCA CGGCGCGGATGAGCTGTTTCCCTGGAGGAGCTGGTCCTGAGCTCTTCCATCCTCGTGATTGCATATGCCTTATTCTACTAAGGATTTTTGCATTGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTATAGATGAGGGAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAAAATAGATTTGCTATAGTTATTATATTTATAATAATATA TTATATAAGAGTAAGTACATCTGGTGTGATTAAGTAGTAGCAAGTTAATGTAATATGGGAT                                                                                                        ]
[+] EMBL CB647837             [                                                                                                                                                                                                                                                     GAGGCGCGCACGTGCGGCTCATGTGCAGCTTCGGGGGACGCATCCTGCCGC GCCC GGGCGACCACCAGCTCCGCTACGTCGGCGGGGAGACCCGCATCGTGTCCGTCCCGCGGGCGGCGACGTTCGACGCCCTCGTCGCGGCGCTGGCCAAGGTCGCCCCCGCGCTCTTCCCGGCGGGCGGGCCATCCCCAGCGCTCAGGTACCAGCTCCCCCAGGACGACCTCGACGCGCTCATCTCCATCACCTCCGACGACGACGTGGACAACCTCATCGAGGAGATCGACCGGTTCCAAGGCCTCGCCGCCGCCTCCATCAAGCCGCCACGCCTCCGCCTCTTCCTCTTCGCCTCCTCGCCCGCCGACCACGCCTCCGCGGCCGCCTTCGGCTCCGTCCTCTCCGGCGCCGGCGGCGACTCCTCCTCCGACCAGTGGGTCGTCGACGCGCTCAACGCCCCCGCGCCTGCCCCCATCGAGCGCGGCCGATCCGAGGCCTCGTCGATCATCTCCGAGGTCCCCGACTACCTCTTCGGCCTCGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB647679             [                                                                                                                                                                                                                                                     GAGGCGCGCACGTGCGGCTCATGTGCAGCTTCGGGGGACGCATCCTGCCGC GCCC GGGCGACCACCAGCTCCGCTACGGCGGCGGGGAGACCCGCATCGTGTCCGTCCCGCGGGCGGCGACGTTCGACGCCCTCGTCGCGGCGCTGGCCAAGGTCGCCCCCGCGCTCTTCCCGGCTGGCGGGCCATCCCCAGCGCTCAGGTACCAGCTCCCCCAGGACGACCTCGACGCGCTCATCTCCATCACCTCCGACGACGACGTGGACAACCTCATCGAGGAGATCGACCGGTTCCAGGGCCTCGCCGCCGCCTCCATCAAGCCGCCACGCCTCCGCCTCTTCCTCTTCGCCTCCTCGCCCGCCGACCACGCCTCCGCGGCCGCCTTCGGCTCCGTCCTCTCCGGCGCCGGCGGCGACTCCTCCTCCGACCAGTGGGTCGTCGACCCGCTCAACGACCCCGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB682619             [                                                                                                                                                                                                                                                     GAGGCGCGCACGTGCGGCTCATGTGCAGCTTCGGGGGACGCATCCTGCCGC GCCC GGGCGACCACCAGCTCCGCTACGTCGGCGGGGAGACCCGCATCGTGTCCGACCCGCGGGCGGCGACGTTCGACGCCCTCGTCGCGGCGCTGGCCAAGGTCGCCCCCGCGCTCTTCCCGGCGGGCGGGCCATCCCCGGCGCTCAGGTACCATCTCCCCCAGGACGACCTCGACGCGCTCATCTCCATCACCTCCGACGACGACGTGGACAACCTCATCGAGGAGATCGACCGGTTGCATGGCCTCGCCGACGCCTCCAACAAGCCGCCACGCCTCCGCCTCTTCCACTTCGCCTCCTCGGCCGCCGACaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU078680             [                                                                                                                                                                                                                                                     GAGGCGCGCACGTGCGGCTCATGTGCAGCTTCGGGGGACGCATCCTGCCGC GCCC GGGCGACCACCAGCTCCGCTACGTCGGCGGGGAGACCCGCATCGTGTCCGTCCCGCGGGCGGCGACGTTCGACGCCCTCGTCGCGGCGCTGGCCAAGGTCGCCCCCGCGCTCTTCCCGGCGGGCGGGCCATCCCCGGCGCTCAGGTACCAGCTCCCCCAGGACGACCTCGACGCGCTCATCTCCATCACCTCCGACGACGACGTGGACAACCTCATCGAGGAGATCGACCGGTTCCAGGGCCTCGCCGCCGCCTCCATCAAGCCGCCACGCCTCCGCCTCTTCCTCTTCGCCTCCTCGCCCGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU082226             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGTCCTCTCCGGCGCCGGCNG GACTCCTCCTCCGACCAGTGGTTCGTCGACGCGCTCAACGCCCCCGCGCCTGCCCCCATCGAGCGCGGCCGATCCGAGGCCTCGTCGATCATCTCCGAGGTCCCCGACTACCTCTTCGGCCTCGACACCACCTCCGACGAACCCAGCCCTGGTCCCGGAGGAGCCCGCCCCAAGGTCGACACGGAGATGGCCCACGTCGAGGACGACGCGCCGGTTCTCTCGCGGGGGACGCCGCCTGCCCCGTACGTCACCGAGAGCGCGCCATGGCCGGCCCCGCCGCCGCCGTACA TGACGCAGCAGGTG TACTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGGCGGATACATGCCGGGTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU162695             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCGACACCACCTCCGACGAACCCAGCCCTGGTCCCGGAGGAGCCCGCCCCAAGGTCGACACGGAGATGGCCCACGTCGAGGACGACGCGCCGGTTCTCTCGCGGGGGACGCCGCCTGCCCCGTACGTCACCGAGAGCGCGCCATGGCCGGCCCCGCCGCCGCCGTACA TGACGCAGCAGGTG TACTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGGCGGATACATGCCGGGTCCAGTCTACCACATTGTCGGTGGCGGAGGAAGCGAGGCGCGGGGAGATCTCTACTCCACCGGGGGCAGTGTCTCCGCCGCCGCCGGCGTTCGGNCGGCGTTCTTACGGGCGTTCCCGNACCCCATGGCAGCCGTTCCCGCCGATGGATGTACGGG NACGCGCCGCCGCCCGGCG CGGTGGTTCTAATCGTTCGGANGGGAAAGCCGCCGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB647838             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCCTGGTCCCGGAGGAGCCCGCCCCAAGGTCGACACGGAGATGGCCCACGTCGAGGACGACGCGCCGGTTCTCTCGCGGGGGACGCCGCCTGCCCCGTACGTCACCGAGAGCGCGCCATGGCCGGCCCCGCCGCCGCCGTACA TGACGCAGCAGGTG TACTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGGCGGATACATGCCGGGTCCAGTCTACCACATTGTCGGTGGCGGAGGAAGCGAGGCGCGGGGAGATCTCTACTCCACCGGGGGCAGTGTCTCCGCCGCCGCCGGCG TCGG CGGCG TC TAC GGCG TCCCGCACCCCAT GCAGCCGTTCCCGCCGAT GATGTACGGG CACGCGCCGCCGCCCGGCG CGGTGG TCTACTCG TCGGA GGGGAAGCCGCCGATGGAAGGTGGGGCCCACGCCTCGTAGGCCCCGCAAGTGGAGAGGAGGGAGGGAG GCAGAGCA CGGCGCGGATGAGCTGTTTCCCTGGAGGAGCTGGTCCTGAGCTCTTCCATCCTCGTGATTGCATATGCCTTATTCTACTAAGGATTTTTGCATTGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTATAGATGAGGGAGGTGGAGGATGGGAGTGATATTGCAATTTTCGTCAAGTGAAAATAGATTTGta                                                                                                                                                                                                ]
[-] EMBL CB647680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCCCACGTCGAGGACGACGCGCCGGTTCTCTCGCGGGGGACGCCGCCTGCCCCGTACGTCACCGAGAGCGCGCCATGGCCGGCCCCGCCGCCGCCGTACA TGACGCAGCAGGTG TACTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGGCGGATACATGCCGGGTCCAGTCTACCACATTGTCGGTGGCGGAGGAAGCGAGGCGCGGGGAGATCTCTACTCCACCGGGGGCAGTGTCTCCGCCGCCGCCGGCG TCGG CGGCG TC TAC GGCG TCCCGCACCCCAT GCAGCCGTTCCCGCCGAT GATGTACGGG CACGCGCCGCCGCCCGGCG CGGTGG TCTACTCG TCGGA GGGGAAGCCGCCGATGGAAGGTGGGGCCCACGCCTCGTAGGCCCCGCAAGTGGAGAGGAGGGAGGGAG GCAGAGCA CGGCGCGGATGAGCTGTTTCCCTGGAGGAGCTGGTCCTGAGCTCTTCCATCCTCGTGATTGCATATGCCTTATTCTACTAAGGATTTTTGCATTGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTATAGATGAGGGAGGTGGAGGATGGGAGGGATATTGCAATTTTCGTCAAGTGAAAATAGATTTGCAATGGTTAT                                                                                                                                                                                        ]
[+] EMBL BI797159             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               cCCCCTCC CC CCGTACATTGAC CACCAGGTGTTACTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGCCGGATACAT CCGGGTCCAGTCTACCACATTGTCGGT GCGGAGGAAGCGAGGCGCGGGGAGATCTCTACTCCACCGGGGCCAGTGTCTCCGCCGCCGCCGGCG TC G CGGCG TC TAC GGCG TCCCGCACCCCAT GCAGCCGTTCCCGCCGAT GATGTACGGG CACGCGCCGCCGCCCGGCG CGGTGG TCTACTCG TCGGA GGGGAA CCGCCGATGGAAGGTGGGGCCCACGCCTCGTAGGCCCCGCAAGTGGAGAGGAGGGAGGGAGCGCAGAGCACCGGCGCGGATGAGCTGTTTCCCTGGAGGAGCTGGTCCTGAGCTCTTCCATCCTCGTGATTGCATATGCCTTATTCTACTAAGGATTTTTGCATTGCCCTTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTATAGATGAGGGA GTGGAGGATGGGATTGATATT C ATTTTCGTCAAGTGAAAATAGATTTGCTATAGTTATTATATTTATAATAATATACTTATATAAGAGTAAaaaaa                                                                                                                                                  ]
[-] EMBL CB682620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGCCGCCGCCGTACA TGACGCAGCAGGTG TACTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGGCGGATACATGCCGGGTCCAGTCTACCACATTGTCGGTGGCGGAGGAAGCGAGGCGCGGGGAGATCTCTACTCCACCGGGGGCAGTGTCTCCGCCGCCGCCGGCG TCGG CGGCG TT TAC GGCG TCCCGCACCCCAT GCAGCCGTTCCCGCCGAT GATGTACGGG CACGCGCCGCCGCCCGGCG CGGTGG TCTACTCG TCGGA GGGGAAGCCGCCGATGGAAGGTGGGGCCCACGCCTCGTAGGCCCCGCAAGTGGAGAGGAGGGAGGGAG GCAGAGCA CGGCGCGGATGAGCTGTTTCCCTGGAGGAGCTGGTCCTGAGCTCTTCCATCCTCGTGATTGCATATGCCTTATTCTACTAAGGATTTTTGCATTGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTATAGATGAGGGAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAAAATAGATTTGCTATAGTTATTATATTTATAATAATATA TTATATAAGAGTAAGTACATCTGGTGTGATTAAGTAGTAGCAAGTTAATGTAATATGGGATTCATATGTTCTATGTGGTTCCTACCTGAGGAAGTCAAAATTTTGTGTGCTGCTGGATGCTTGAGGGATTAAAATGTAAACAATTCCTGTGCTTACCTTAAAAGG]
[+] EMBL AU056512             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCCCGCACCCCAT GCAGCCTTCCCCGCCGAT GATGTACGGGCCACGCGCCGCCGCCCGGCGCCGGTGG TCTACTCG TCGGA GGGGAAGCCGCCGATGGAAGGTGGGGCCCACGCCTCGTAGGCCCCGCAAGTGGAGAGGAGGGAGGGAG GCAGAGCA CGGCGCGGATGAGCTGTTTCCCTGGAGGAGCTGGTCCTGAGCTCTTCCATCCTCGTGATTGCATATGCCTTATTCTACTAAGGATTTTTGCATTGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTATAGATGAGGGAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAAAATAGATTTGCTATAGTTATTATATTTATAATAATATA TTATATAAGAGTAAGTACATCTGGTGTGATTAAGTAGTAGCAAGTTAATGTAATATGGGATTCATATGTTCTATGTGGTTCCTACCTGAGGAAGTCAAAATTTTGTGTGCTGCTGGATGCTTGATGGATTAAAATGTAAACAATTCCTGTGATTAaaaa      ]




>consensus_13819#0
TCTCTCTCCTCCAATTCCTCCAATCCCAAATTCCACCCTCCTCTTGCCAATTACCCCCCT
CCTCCTCCTCCTCCCCCACGACTCCCAAAATCCCCTCCTCCACCCCCTCCGCATCTCCCC
ATGTCGTCGTCGCCTCCTCCACCCCTCGCAGCCGCGCGTGCAACAGCGGGACCAGCACAC
GCCGCCACTGCCCCCGGCCCCGCATGGGAACGGCATGGTGCGCGCCGGAGGAGGAGGAGG
AGGAGGAGGCGCGCACGTGCGGCTCATGTGCAGCTTCGGGGGACGCATCCTGCCGCGCCC
GGGCGACCACCAGCTCCGCTACGTCGGCGGGGAGACCCGCATCGTGTCCGTCCCGCGGGC
GGCGACGTTCGACGCCCTCGTCGCGGCGCTGGCCAAGGTCGCCCCCGCGCTCTTCCCGGC
GGGCGGGCCATCCCCGGCGCTCAGGTACCAGCTCCCCCAGGACGACCTCGACGCGCTCAT
CTCCATCACCTCCGACGACGACGTGGACAACCTCATCGAGGAGATCGACCGGTTCCAGGG
CCTCGCCGCCGCCTCCATCAAGCCGCCACGCCTCCGCCTCTTCCTCTTCGCCTCCTCGCC
CGCCGACCACGCCTCCGCGGCCGCCTTCGGCTCCGTCCTCTCCGGCGCCGGCGGCGACTC
CTCCTCCGACCAGTGGTTCGTCGACGCGCTCAACGCCCCCGCGCCTGCCCCCATCGAGCG
CGGCCGATCCGAGGCCTCGTCGATCATCTCCGAGGTCCCCGACTACCTCTTCGGCCTCGA
CACCACCTCCGACGAACCCAGCCCTGGTCCCGGAGGAGCCCGCCCCAAGGTCGACACGGA
GATGGCCCACGTCGAGGACGACGCGCCGGTTCTCTCGCGGGGGACGCCGCCTGCCCCGTA
CGTCACCGAGAGCGCGCCATGGCCGGCCCCGCCGCCGCCGTACATGACGCAGCAGGTGTA
CTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGGCGGATACATGCC
GGGTCCAGTCTACCACATTGTCGGTGGCGGAGGAAGCGAGGCGCGGGGAGATCTCTACTC
CACCGGGGGCAGTGTCTCCGCCGCCGCCGGCGTCGGCGGCGTCTACGGCGTCCCGCACCC
CATGCAGCCGTTCCCGCCGATGATGTACGGGCACGCGCCGCCGCCCGGCGCGGTGGTCTA
CTCGTCGGAGGGGAAGCCGCCGATGGAAGGTGGGGCCCACGCCTCGTAGGCCCCGCAAGT
GGAGAGGAGGGAGGGAGGCAGAGCACGGCGCGGATGAGCTGTTTCCCTGGAGGAGCTGGT
CCTGAGCTCTTCCATCCTCGTGATTGCATATGCCTTATTCTACTAAGGATTTTTGCATTG
CCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTT
GCTGTATAGATGAGGGAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAAAA
TAGATTTGCTATAGTTATTATATTTATAATAATATATTATATAAGAGTAAGTACATCTGG
TGTGATTAAGTAGTAGCAAGTTAATGTAATATGGGATTCATATGTTCTATGTGGTTCCTA
CCTGAGGAAGTCAAAATTTTGTGTGCTGCTGGATGCTTGAGGGATTAAAATGTAAACAAT
TCCTGTGCTTACCTTAAAAGG

consensusID : consensus_13819#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 366
fasta sequence

                              [NTCCATCCCCCGTGATTGCATATGCCTTATTCCTACTAAGGATTTTTGCATTGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTATAGATGAGGNAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAAAATAGATTTGCTATAGTTATTATATTTATAATAATATATTATATAAGAGTAAGTACATCTGGTGTGATTAAGTAGTAGCAAGTTAATGTAATATGGGATTCATATGTTCTATGTGGTTCCTACCTGAGGAAGTCAAAATTTTGTGTGCTGCTGGATGCTTGATGGATTAAAATGTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C98679               [NTCCATCCCCCGTGATTGCATATGCCTTATTCCTACTAAGGATTTTTGCATTGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTATAGATGAGGNAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAAAATAGATTTGCTATAGTTATTATATTTATAATAATATATTATATAAGAGTAAGTACATCTGGTGTGATTAAGTAGTAGCAAGTTAATGTAATATGGGATTCATATGTTCTATGTGGTTCCTACCTGAGGAAGTCAAAATTTTGTGTGCTGCTGGATGCTTGATGGATTAAAATGTAAAAAAAAAAAAAAAAAAAA]




>consensus_13819#1
NTCCATCCCCCGTGATTGCATATGCCTTATTCCTACTAAGGATTTTTGCATTGCCATTGC
CGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGGTTGCTGTAT
AGATGAGGNAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAAAATAGATTT
GCTATAGTTATTATATTTATAATAATATATTATATAAGAGTAAGTACATCTGGTGTGATT
AAGTAGTAGCAAGTTAATGTAATATGGGATTCATATGTTCTATGTGGTTCCTACCTGAGG
AAGTCAAAATTTTGTGTGCTGCTGGATGCTTGATGGATTAAAATGTAAAAAAAAAAAAAA
AAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13819#0      TCTCTCTCCTCCAATTCCTCCAATCCCAAATTCCACCCTCCTCTTGCCAATTACCCCCCT 60
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CCTCCTCCTCCTCCCCCACGACTCCCAAAATCCCCTCCTCCACCCCCTCCGCATCTCCCC 120
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      ATGTCGTCGTCGCCTCCTCCACCCCTCGCAGCCGCGCGTGCAACAGCGGGACCAGCACAC 180
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      GCCGCCACTGCCCCCGGCCCCGCATGGGAACGGCATGGTGCGCGCCGGAGGAGGAGGAGG 240
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      AGGAGGAGGCGCGCACGTGCGGCTCATGTGCAGCTTCGGGGGACGCATCCTGCCGCGCCC 300
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      GGGCGACCACCAGCTCCGCTACGTCGGCGGGGAGACCCGCATCGTGTCCGTCCCGCGGGC 360
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      GGCGACGTTCGACGCCCTCGTCGCGGCGCTGGCCAAGGTCGCCCCCGCGCTCTTCCCGGC 420
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      GGGCGGGCCATCCCCGGCGCTCAGGTACCAGCTCCCCCAGGACGACCTCGACGCGCTCAT 480
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CTCCATCACCTCCGACGACGACGTGGACAACCTCATCGAGGAGATCGACCGGTTCCAGGG 540
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CCTCGCCGCCGCCTCCATCAAGCCGCCACGCCTCCGCCTCTTCCTCTTCGCCTCCTCGCC 600
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CGCCGACCACGCCTCCGCGGCCGCCTTCGGCTCCGTCCTCTCCGGCGCCGGCGGCGACTC 660
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CTCCTCCGACCAGTGGTTCGTCGACGCGCTCAACGCCCCCGCGCCTGCCCCCATCGAGCG 720
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CGGCCGATCCGAGGCCTCGTCGATCATCTCCGAGGTCCCCGACTACCTCTTCGGCCTCGA 780
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CACCACCTCCGACGAACCCAGCCCTGGTCCCGGAGGAGCCCGCCCCAAGGTCGACACGGA 840
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      GATGGCCCACGTCGAGGACGACGCGCCGGTTCTCTCGCGGGGGACGCCGCCTGCCCCGTA 900
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CGTCACCGAGAGCGCGCCATGGCCGGCCCCGCCGCCGCCGTACATGACGCAGCAGGTGTA 960
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CTACGTCCCCGTGCGCCCGGTCCACTACCTCGATCCGTCTTCGCAGGGCGGATACATGCC 1020
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      GGGTCCAGTCTACCACATTGTCGGTGGCGGAGGAAGCGAGGCGCGGGGAGATCTCTACTC 1080
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CACCGGGGGCAGTGTCTCCGCCGCCGCCGGCGTCGGCGGCGTCTACGGCGTCCCGCACCC 1140
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CATGCAGCCGTTCCCGCCGATGATGTACGGGCACGCGCCGCCGCCCGGCGCGGTGGTCTA 1200
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CTCGTCGGAGGGGAAGCCGCCGATGGAAGGTGGGGCCCACGCCTCGTAGGCCCCGCAAGT 1260
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      GGAGAGGAGGGAGGGAGGCAGAGCACGGCGCGGATGAGCTGTTTCCCTGGAGGAGCTGGT 1320
consensus_13819#1      ------------------------------------------------------------
                                                                                   

consensus_13819#0      CCTGAGCTCTTCCATCCTC-GTGATTGCATATGCCTTATTC-TACTAAGGATTTTTGCAT 1378
consensus_13819#1      ---------NTCCATCCCCCGTGATTGCATATGCCTTATTCCTACTAAGGATTTTTGCAT 51
                                 ******* * ********************* ******************

consensus_13819#0      TGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGG 1438
consensus_13819#1      TGCCATTGCCGTGTGGTGAATTCTTATTTTTATTCTTCTTCTTTGGATGGCTTATGTGGG 111
                       ************************************************************

consensus_13819#0      TTGCTGTATAGATGAGGGAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAA 1498
consensus_13819#1      TTGCTGTATAGATGAGGNAGGTGGAGGATGGGATTGATATTGCAATTTTCGTCAAGTGAA 171
                       ***************** ******************************************

consensus_13819#0      AATAGATTTGCTATAGTTATTATATTTATAATAATATATTATATAAGAGTAAGTACATCT 1558
consensus_13819#1      AATAGATTTGCTATAGTTATTATATTTATAATAATATATTATATAAGAGTAAGTACATCT 231
                       ************************************************************

consensus_13819#0      GGTGTGATTAAGTAGTAGCAAGTTAATGTAATATGGGATTCATATGTTCTATGTGGTTCC 1618
consensus_13819#1      GGTGTGATTAAGTAGTAGCAAGTTAATGTAATATGGGATTCATATGTTCTATGTGGTTCC 291
                       ************************************************************

consensus_13819#0      TACCTGAGGAAGTCAAAATTTTGTGTGCTGCTGGATGCTTGAGGGATTAAAATGTAAACA 1678
consensus_13819#1      TACCTGAGGAAGTCAAAATTTTGTGTGCTGCTGGATGCTTGATGGATTAAAATGTAAAAA 351
                       ****************************************** *************** *

consensus_13819#0      ATTCCTGTGCTTACCTTAAAAGG 1701
consensus_13819#1      AAAAAAAAAAAAAAA-------- 366
                       *           *