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Oryza sativa
cluster # 13854 cluster # 13854       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13854#0 length = 1168 sequences # 13  
consensus_13854#1 length = 536 sequences # 1  

consensusID : consensus_13854#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1168
fasta sequence
                              [ATTCTTTCCTCTCCTGCTCGGCTTCCCCCCCAACCCCCGCCTTCTCCCCTCCGACTCCGGCCACCTCCGCGGCGGCGGAGCATCCTAGGGTTTCGCGCCGGCTCGCCGCCGGCGT-ACGGAGAGGGAGGGTGTAACACGCGCAGGCCTGCGCCGTCGTCCTGCTCTGGGAACTTCCGCGTGCAGCGAGGGATGGACGAGTGGGTTCGCCAGGCCGAGGTGTGGGTGGGACAAGCCGAGAGGTGGATCCGGCAGCAGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACGGTTCTGTTGCTGGTCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAGTGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCGGGATGGATCAACACATCAAGGAACTGTGACTTCAATGGAACAAAACAACGATACTTTCGTGCTTCATTCTGAGCTGGAGAGGAGAGGCAAAGT-AAAACCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGGCTCAAACCCAAACTTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTCTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGTAGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA-CTG-ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCT-GACCGGT-AATGTTTCAGCGG-TTGA-GGAGTTCATTCGTGAGTATGTGAAAGC-T-TAGGCCT-T-AGA-GTTGTCGGACCTTTACA-GAATAGAGTTTGTATTCG-TTCAAAATTGTCATCTAAGCGGAGACTGATTTTCCTGATGGAAGAAGGAAAACCTTCATCATCTCATCTGCATCTGCTTCATTCCATTCATGCGTGTGAGAAATTTCAACATT-TTCTTGAAAGGAAAGCATCGGACATTCAGTTGAA---AAAAAAAAAAAAAAAAAA]

[+] EMBL CF278511             [ATTCTTTCCTCTCCTGCTCGGCTTCCCCCCCAACCCCCGCCTTCTCCCCTCCGACTCCGGCCACCTCCGCGGCGGCGGAGCATCCTAGGGTTTCGCGCCGGCTCGCCGCCGGCGT ACGGAGAGGGAGGGTGTAACACGCGCAGGCCTGCGCCGTCGTCCTGCTCTGGGAACTTCCGCGTGCAGCGAGGGATGGACGAGTGGGTTCGCCAGGCCGAGGTGTGGGTGGGACAAGCCGAGAGGTGGATCCGGCAGCAGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACGGTTCTGTTGCTGGTCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAGTGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCGGGATGGATCAACACATCAAGGAACTGTGACTTCAATGGAACAAAACAACGATACTTTCGTGCTTCATTCTGAGCTGGAGAGGAGAGGCAAAGT AAAACCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGGCTCAAACCCAAACTTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTCTTGTCTACCATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK067169             [                   GGCTTCCCCCCCAACCCCCGCCTTCTCCCCTCCGACTCCGGCCACCTCCGCGGCGGCGGAGCATCCTAGGGTTTCGCGCCGGCTCGCCGCCGGCGT ACGGAGAGGGAGGGTGTAACACGCGCAGGCCTGCGCCGTCGTCCTGCTCTGGGAACTTCCGCGTGCAGCGAGGGATGGACGAGTGGGTTCGCCAGGCCGAGGTGTGGGTGGGACAAGCCGAGAGGTGGATCCGGCAGCAGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACGGTTCTGTTGCTGGTCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAGTGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCGGGATGGATCAACACATCAAGGAACTGTGACTTCAATGGAACAAAACAACGATACTTTCGTGCTTCATTCTGAGCTGGAGAGGAGAGGCAAAGT AAAACCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGGCTCAAACCCAAACTTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTCTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGTAGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA CTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCT GACCGGT AATGTTTCAGCGG TTGA GGAGTTCATTCGTGAGTATGTGAAAGC T TAGGCCT T AGA GTTGTCGGACCTTTACA GAATAGAGTTTGTATTCG TTCAAAATTGTCATCTAAGCGGAGACTGATTTTCCTGATGGAAGAAGGAAAACCTTCATCATCTCATCTGCATCTGCTTCATTCCATTCATGCGTGTGAGAAATTTCAACATT TTCTTGAAAGGAAAGCATCGGA                                 ]
[+] EMBL C28556               [                                                           GCCACCTCCGCGGCGGCGGAGCATCCTAGGGTTTCNCNCCGGCTCGCCGCCGG GTAACGGAGAGGGAGGGTGTAACACGCGCAGGCCTGCNCCGTCGTCCTGCTCTGGGAACTTCCGCGTGCAG GAGNGATGGACGAGTGGGTTCGCCAGGCCGAGGTGTGGGTGGGACAAGCCGAGAGGTGGATCCGGCAGCAGCCTCCCGAGCAGGTTTACGTCGNCGTCGCGGTGGTCGCCGTGACGGTTCTGTTGCTGGTCGCAGTTTCGTGCCTTAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAGTGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCGGGATGGATCAACACATCAAGGAACTGTGACTTCAATGG ACAAAACAACGATACTTTCGTGCTTCATTCTTAGCTGGAGAAGAGA GCAAAGT A                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF314163             [                                                                                                                                                                                                                                                                                                                                                                                                  CTATTCTCTTCTACCAGCTTCGGGATGGATCAACACATCAAGGAACTGTGACTTCAATGGAACAAAACAACGATACTTTCGTGCTTCATTCTGAGCTGGAGAGGAGAGGCAAAGT AAAACCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGGCTCAAACCCAAACTTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTCTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGTAGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA CTGNATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCA                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU161319             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAGGAGAGGCAAAGTNAAACCCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGGCTCAAACCCAAACTTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTCTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGTAGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA CTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCT GACCGGT AATGTTTCAGCGG TTGA GGAGTTCATTCGTGAGTATGTGAAAGC T TAGGCCT T AGA GTTGTCGGACCTTTACA GAATAGAGTTTGTATTCG TTCAAAATTGTCATCTAAGCGGAGACTGATTTTCCTGATGGAAGAAGGAAANCCTTCATCATCTCATCTGCATCTGCTTCATTCCATTCATGCGTGTGAGAAATTTCAACATT TTCTTGAAAGGAAAGCATCGGACATTCAGTTGAACTTAAAAAAAAAAAAAAAAAA]
[-] EMBL CF314164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AACCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGGCTCAAACCCAAACTTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTTTTGTTTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGTAGTGAAGAAGAGGGTTCCTGTTTTGATATTTTGCAACAAGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATTTGCTGACATCA CTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTTT GACCGGT AATGTTTCAGCGG TTGA GGAGTTCATTTGTGAGTATGTGAAAGC T TAGGCCT T AGA GTTGTCGGACCTTTACA GAATAGAGTTTGTATTTG TTCAAAATTGTCATTTAAGCGGAGACTGATTTTCCTGATAAAAAAAAAAAAAaaaa                                                                                                                 ]
[+] EMBL AU163274             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTCTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGTAGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA CTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAGGGTGCTGGTCT GACCGGT AATGTTTCAGCGG TTGA GGAGTTCATCCGTGAGTATGTNAAAGC T TAGGCCT TAAGA GTTTTCGGACCTTTACA GATTAGGGTTTGTATTCG                                                                                                                                                                          ]
[+] EMBL AU063469             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTCTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGTAGTGAAGAAGAGGGTTCCTGTTCTNATATTCTGCAACAAGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA CTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTANTTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCT GACCGGT AATGTTTCAGCGG TTGAGGGAGTTCATTCGTGAGTATGTGAAAGCTT TAGGCCT T AGA GTTGTCGGACCTTTACA GAATAGAGTTTGTATTCG  TCAAAATTGTCATCTAAGCGGNGACTGA TTTCCTGTTGG AGANGG  AACCCTCA CA CTCA CTG ANCTGtt                                                                                           ]
[+] EMBL C97613               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTCTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTNTAGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA CTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCT GACCGGT AATGTTTCAGCGG TTGA GGAGTTCATTCGTGAGTATGTGAAAGC T TAGGCCT T AGA GTTGTCGGACCTTTACA GAATAGAGTTTGTATTCG TTCAAAATTGTCATCTAAGCGGAGACTGATTTTCCTGATGGAAGAAGGAAAACCTTCATCATCTCATCTGCATCTGCTTCATTCCATTCATGCGTGTGAGAAATTTCAACATT TTCTTGAAAGGAAAGCATCGGACATTCAGTTGAA   AAAAAAAAAAAAAAAAAA]
[+] EMBL BI811216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGTAGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCCATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA CTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCT GACCGGT AATGTTTCAGCGG TTGA GGAGTTCATTCGTGAGTATGTGAAAGC T TAGGCCT T AGA GTTGTCGGACCTTTACA GAATAGAGTTTGTATTCG TTCAAAATTGTCATCTAAGCGGAGACTGATTTTCCTGATGGAAGAAGGAAAACCTTCATCATCTCATCTGCATCTGCTTCATTCCATTCATGCGTGTGAGAAATTTCAACATT TTCTTGAAAGGAAAGCATCGGACATTCAGTTGAA   AAAAA             ]
[+] EMBL BI811236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         tccagGAGTACTTGTATGACATCCTGAC AAGCCCCCTGTAGTGAAGAAGAGGCTTCCTGTTCTGATATTCGGCAACAAGACAGATAAAGTTACAGCTCACTC AAAGAATTCATCAAGAAGCCATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAAC CCATATCATCTGCTGACATCATCTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCA CCAATGCCAGCACAAGGTGACAGTTACTGAAGGTGCTGGTCTCGACCGGTCAATGTTTCA CGGCTTGA GGAGTTCATTCGTGAGTATGTGAAAGC TCTAGGCCTCT AGACATTGTCGGACCTTTACACGAATAGAGTTTGTATTCGCTTCCAAATTGTCATCTAAGCGGAGACTGATTTTCCTGATGGAAGAAGG AAACCTTCATCATCTCATCTGCATCTGCTTCATTCCATTCATGCGCGTGAGAAATTTCAACATTCTTCTTGAAAGGAAAGCATCGGACATTCAGTTGAA   AAAAA             ]
[+] EMBL CB683815             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGCACCATGACAGATAAAGTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA CTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCT GACCGGT AATGTTTCAGCGG TTGA GGAGTTCATTCGTGAGTATGTGAAAGC T TAGGCCT T AGA GTTGTCGGACCTTTACA GAATAGAGTTTGTATTCG TTCAAAATTGTCATCTAAGCGGAGACTGATTTTCCTGATGGAAGAAGGAAAACCTTCATCATCTCATCTGCATCTGCTTCATTCCATTCATGCGTGTGAGAAATTTCAACATT TTCTTGAAAGGAAAGCATCGGACATTC                            ]
[-] EMBL CF278512             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGAACGCCATATCATCTGCTGACATCA CTG ATGAAGTCAAGCTTGGGAACCCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCT GACCGGT AATGTTTCAGCGG TTGA GGAGTTCATTCGTGAGTATGTGAAAGC T TAGGCCT T AGA GTTGTCGGACCTTTACA GAATAGAGTTTGTATTCG TTCAAAATTGTCATCTAAGCGGAGACTGATTTTCCTGATGGAAGAAGGAAAACCTTCATCATCTCAaaaaa                                                                                                  ]


>consensus_13854#0 ATTCTTTCCTCTCCTGCTCGGCTTCCCCCCCAACCCCCGCCTTCTCCCCTCCGACTCCGG CCACCTCCGCGGCGGCGGAGCATCCTAGGGTTTCGCGCCGGCTCGCCGCCGGCGTACGGA GAGGGAGGGTGTAACACGCGCAGGCCTGCGCCGTCGTCCTGCTCTGGGAACTTCCGCGTG CAGCGAGGGATGGACGAGTGGGTTCGCCAGGCCGAGGTGTGGGTGGGACAAGCCGAGAGG TGGATCCGGCAGCAGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACG GTTCTGTTGCTGGTCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTA TCTGGGCTCAGTGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCGGGATGGATCAACA CATCAAGGAACTGTGACTTCAATGGAACAAAACAACGATACTTTCGTGCTTCATTCTGAG CTGGAGAGGAGAGGCAAAGTAAAACCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGG CTCAAACCCAAACTTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGAT GCTCAAGATTTCTTGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACA AAGGCAACTGTAGTGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAA GTTACAGCTCACTCAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTC CGGGAATCAAGGAACGCCATATCATCTGCTGACATCACTGATGAAGTCAAGCTTGGGAAC CCTGGAGAAGCATTTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCT GGTCTGACCGGTAATGTTTCAGCGGTTGAGGAGTTCATTCGTGAGTATGTGAAAGCTTAG GCCTTAGAGTTGTCGGACCTTTACAGAATAGAGTTTGTATTCGTTCAAAATTGTCATCTA AGCGGAGACTGATTTTCCTGATGGAAGAAGGAAAACCTTCATCATCTCATCTGCATCTGC TTCATTCCATTCATGCGTGTGAGAAATTTCAACATTTTCTTGAAAGGAAAGCATCGGACA TTCAGTTGAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13854#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 536
fasta sequence
                              [CCTTCTCCCCTCCGACTCCGGCCACCTCCGCGGCGGCGGAGCATCCTTAGGTTTCGCGCCGGCTCGCCGCCGGCGTACGGAGAGGGAGGGTGTAACACGCGCAGGCCTGCGCCGTCGTCCTGCTCTGGGAACTTCCGCGTGCAGCGAGGTAACGCGCATCTCCGCTGCTCCTTCAGATCTGATCGTCTTCTTCCAGCCCACGCGCTCCGCTCGCCGCTTGCTCACCCCCACCTCCGTCGCCTCGTTTCGTGCAGGGATGGACGAGTGGGTTCGCCAGGCCGAGGTGGTGGGTGGGACAAGCCGAGAGGTGGATCCGGCAGCAGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACGGTTCTGTTGCTGGTCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAGTGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCNGGATGGATCAACACATCAAGGAACTGTGACTTCAATGGAACAAAACAACGATACTTTCGTG]

[+] EMBL CF311936             [CCTTCTCCCCTCCGACTCCGGCCACCTCCGCGGCGGCGGAGCATCCTTAGGTTTCGCGCCGGCTCGCCGCCGGCGTACGGAGAGGGAGGGTGTAACACGCGCAGGCCTGCGCCGTCGTCCTGCTCTGGGAACTTCCGCGTGCAGCGAGGTAACGCGCATCTCCGCTGCTCCTTCAGATCTGATCGTCTTCTTCCAGCCCACGCGCTCCGCTCGCCGCTTGCTCACCCCCACCTCCGTCGCCTCGTTTCGTGCAGGGATGGACGAGTGGGTTCGCCAGGCCGAGGTGGTGGGTGGGACAAGCCGAGAGGTGGATCCGGCAGCAGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACGGTTCTGTTGCTGGTCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAGTGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCNGGATGGATCAACACATCAAGGAACTGTGACTTCAATGGAACAAAACAACGATACTTTCGTG]


>consensus_13854#1 CCTTCTCCCCTCCGACTCCGGCCACCTCCGCGGCGGCGGAGCATCCTTAGGTTTCGCGCC GGCTCGCCGCCGGCGTACGGAGAGGGAGGGTGTAACACGCGCAGGCCTGCGCCGTCGTCC TGCTCTGGGAACTTCCGCGTGCAGCGAGGTAACGCGCATCTCCGCTGCTCCTTCAGATCT GATCGTCTTCTTCCAGCCCACGCGCTCCGCTCGCCGCTTGCTCACCCCCACCTCCGTCGC CTCGTTTCGTGCAGGGATGGACGAGTGGGTTCGCCAGGCCGAGGTGGTGGGTGGGACAAG CCGAGAGGTGGATCCGGCAGCAGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCG CCGTGACGGTTCTGTTGCTGGTCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCA TAGTGCTATCTGGGCTCAGTGGTAGTGGCAAAACTATTCTCTTCTACCAGCTTCNGGATG GATCAACACATCAAGGAACTGTGACTTCAATGGAACAAAACAACGATACTTTCGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13854#0      ATTCTTTCCTCTCCTGCTCGGCTTCCCCCCCAACCCCCGCCTTCTCCCCTCCGACTCCGG 60
consensus_13854#1      ---------------------------------------CCTTCTCCCCTCCGACTCCGG 21
                                                              *********************

consensus_13854#0      CCACCTCCGCGGCGGCGGAGCATCCTAGGGTTTCGCGCCGGCTCGCCGCCGGCGTACGGA 120
consensus_13854#1      CCACCTCCGCGGCGGCGGAGCATCCTTAGGTTTCGCGCCGGCTCGCCGCCGGCGTACGGA 81
                       **************************  ********************************

consensus_13854#0      GAGGGAGGGTGTAACACGCGCAGGCCTGCGCCGTCGTCCTGCTCTGGGAACTTCCGCGTG 180
consensus_13854#1      GAGGGAGGGTGTAACACGCGCAGGCCTGCGCCGTCGTCCTGCTCTGGGAACTTCCGCGTG 141
                       ************************************************************

consensus_13854#0      CAGCGAGG---------------------------------------------------- 188
consensus_13854#1      CAGCGAGGTAACGCGCATCTCCGCTGCTCCTTCAGATCTGATCGTCTTCTTCCAGCCCAC 201
                       ********                                                    

consensus_13854#0      ------------------------------------------------------GATGGA 194
consensus_13854#1      GCGCTCCGCTCGCCGCTTGCTCACCCCCACCTCCGTCGCCTCGTTTCGTGCAGGGATGGA 261
                                                                             ******

consensus_13854#0      CGAGTGGGTTCGCCAGGCCGAGGTG-TGGGTGGGACAAGCCGAGAGGTGGATCCGGCAGC 253
consensus_13854#1      CGAGTGGGTTCGCCAGGCCGAGGTGGTGGGTGGGACAAGCCGAGAGGTGGATCCGGCAGC 321
                       ************************* **********************************

consensus_13854#0      AGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACGGTTCTGTTGCTGG 313
consensus_13854#1      AGCCTCCCGAGCAGGTTTACGTCGCCGTCGCGGTGGTCGCCGTGACGGTTCTGTTGCTGG 381
                       ************************************************************

consensus_13854#0      TCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAGTG 373
consensus_13854#1      TCGCAGTTTCGTGCCTGAAATCCTCGAAAGCAAACACCATAGTGCTATCTGGGCTCAGTG 441
                       ************************************************************

consensus_13854#0      GTAGTGGCAAAACTATTCTCTTCTACCAGCTTCGGGATGGATCAACACATCAAGGAACTG 433
consensus_13854#1      GTAGTGGCAAAACTATTCTCTTCTACCAGCTTCNGGATGGATCAACACATCAAGGAACTG 501
                       ********************************* **************************

consensus_13854#0      TGACTTCAATGGAACAAAACAACGATACTTTCGTGCTTCATTCTGAGCTGGAGAGGAGAG 493
consensus_13854#1      TGACTTCAATGGAACAAAACAACGATACTTTCGTG------------------------- 536
                       ***********************************                         

consensus_13854#0      GCAAAGTAAAACCTGTTCATGTTGTTGACGTTCCTGGTCATGCAAGGCTCAAACCCAAAC 553
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      TTGATGAAGTCCTGCCTCAAGCAGCTGGAATAGTTTATGTTGTTGATGCTCAAGATTTCT 613
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      TGTCTACCATGCATGCTGCTGCAGAGTACTTGTATGACATCCTGACAAAGGCAACTGTAG 673
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      TGAAGAAGAGGGTTCCTGTTCTGATATTCTGCAACAAGACAGATAAAGTTACAGCTCACT 733
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      CAAAAGAATTCATCAAGAAGCAATTGGAAAAGGAATTAAACAAGCTCCGGGAATCAAGGA 793
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      ACGCCATATCATCTGCTGACATCACTGATGAAGTCAAGCTTGGGAACCCTGGAGAAGCAT 853
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      TTAATTTCAGCCAATGCCAGAACAAGGTGACAGTTACTGAAGGTGCTGGTCTGACCGGTA 913
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      ATGTTTCAGCGGTTGAGGAGTTCATTCGTGAGTATGTGAAAGCTTAGGCCTTAGAGTTGT 973
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      CGGACCTTTACAGAATAGAGTTTGTATTCGTTCAAAATTGTCATCTAAGCGGAGACTGAT 1033
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      TTTCCTGATGGAAGAAGGAAAACCTTCATCATCTCATCTGCATCTGCTTCATTCCATTCA 1093
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      TGCGTGTGAGAAATTTCAACATTTTCTTGAAAGGAAAGCATCGGACATTCAGTTGAAAAA 1153
consensus_13854#1      ------------------------------------------------------------
                                                                                   

consensus_13854#0      AAAAAAAAAAAAAAA 1168
consensus_13854#1      ---------------
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)