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Oryza sativa
cluster # 13858 cluster # 13858       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13858#0 length = 1257 sequences # 11  
consensus_13858#1 length = 687 sequences # 2  
consensus_13858#2 length = 463 sequences # 1  

consensusID : consensus_13858#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1257
fasta sequence
                              [GTCTCGCCTTGCCCCGTCCACTAACCCTAGCGGCAACTGCGATCTCCAACCGCTCGATCTCTCGCCGGAGGTTCCAGATCTGCGGGAGGTAGTCGACCTCGTCGCCGGCGGTGGGGTTTCCGAATCGGGGGCGAAGATGACGGAGGCGTGGGTGCGGCACAAGCCCGGGATGGCGAGCNTCAAGGACATGCCGGTGCTGCAGGACGGGCCGCCGCCGGGC-GC-T-TCGCGCCCGT-NCGCTACGC-GCGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGCCTTCG-CCTGGGGGATGTACCAGGTTGGCCA-GGGGAACA-AGGTCCGCCGTGCA-CT-CAAAGAGGAGAAAATTGCTGCCCGCA-CCGCTTTAGTGCCAGTGCTCCAAGCTGAAGAAGA-TGAAAGA-TTTGTCAAAGAG-TGGACAAAGTC-TCTTA-TG-TGGGAGGAAATAATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAA-CCAGAATACCCAAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCACT-CGCTGTGCATTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGACATGT-CAAACAGACATTTGTTTCACATGAACTATGCTCTTTTGTGGACGGAACATCTGTTTTGCCCTGATGTTCTCCCTTCTCTATGTTTTATTTTTTTCTACTCTGTACTAAGCACTTCTTGGTCAGTGCTTTACCTTACTGTAAACATTCGAATGTATTCAGTCTTTTTAGACAAAGACACAGGAGGAACATTCAATGTCAAGCGCTTGGATCGGATGGGTATATTACCGAGATAGTGAACGGAAAACTCAAGAAGTCAGAATCAAGCCCGTGATCAGATAGGGAGAGCCAAAACAGTGTCNCTGCGTACTAGAGATAAATGAACAAGCAAAAGGCAACTCAAGAAGTCAGAATCAAGCACGTGATCAGATAGAGAGAGCCAAAGAGCCAAAACAGCGCCNCTGCATGCGTACAGGAGATAAATGAACAAGCAAAAGGCGNCCGATAATATGTATTCCATTCGTTTTATAATGTAAGACTTTTTAGCCTTGCCCACATACATATAGATGTTAAAAAAAAAAAAA]

[+] EMBL AK070573             [GTCTCGCCTTGCCCCGTCCACTAACCCTAGCGGCAACTGCGATCTCCAACCGCTCGATCTCTCGCCGGAGGCTCCAGATCTGCGGGAGGTAGTCGACCTCGTCGCCGGCGGTGGGGTTTCCGAATCGGGGGCGAAGATGACGGAGGCGTGGGTGCGGCACAAGCCCGGGATGGCGAGCGTCAAGGACATGCCGGTGCTGCAGGACGGGCCGCCGCCGGGCGGC T TCGCGCCCGT GCGCTACGC GCGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGCCTTCG CCTGGGGGATGTACCAGGTTGGCCA GGGGAACA AGGTCCGCCGTGCA CT CAAAGAGGAGAAAATTGCTGCCCGCA CCGCTTTAGTGCCAGTGCTCCAAGCTGAAGAAGA TGAAAGA TTTGTCAAAGAG TGGACAAAGTC TCTTA TG TGGGAGGAAATAATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAA CCAGAATACCCAAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCACT CGCTGTGCATTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGACATGT CAAACAGACATTTGTTTCACATGAACTATGCTCTTTTGTGGACGGAACATCTGTTTTGCCCTGATGTTCTCCCTTCTCTATGTTTTATTTTTTTCTACTCTGTACTAAGCACTTCTTGGTCAGTGCTTTACCTTACTGTAAACATTCGAATGTATTCAGTCTTTTTAGACAAAG                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OS1321695            [              CGTCCACTAACCCTAGCGGCAACTGCNATCTCCAACCGCTCGATCTCTCGCCGGAGGTNNCAGATCTGCGGGAGGTAGTCGACCTCGTCGCCGGCGGTGGGGTTTCCGAATCGGGGGCGAAGATGACGGAGGCGTGGGTGCGGCACAAGCCCGGGATGGCGAGCNTCAAGGACATGCCGGTGCTGCAGGACGGGCCGCCGCCGGGC GC TNTCGCGCCCGTGCCGCTACGC G GNCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGACTTCG CCTGGGGGATGTACCAGGTTGGCCA GGGG ACA AGGTCCGCCGTGCA CT NAAAGAGGAGAAAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSS4660A             [                       ACCCTAGCGGCAACTGCNATCTCCAACCGCTCGATCTCTCGCCGGAGNTNCCAGATCTGCGGGAGGTAGTCGACCTCGTCGCCGGCGGTGGGGTTTCCGAATCGGGGGCGAAGATGACGGAGGCGTGGGTNCGGCACAAGCCCGGGATGGCGAGCNTCAAGGACATGCCGGTGCTGCAGGACGGGCCGCCGCCGGGC GC TNTCGCGCCCGT NCGCTACGC  NGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGCCTTCG CCTGGGGGATGTACCAGGTTGGCCA GGGGAACA AGGTCCGCCGTGCA CT CAAAGAGGAGAAAATTGCTGCCCGNA CCGCTTTAGTGCCAATTCTTCAAGCTGAAGAAGA TGAAAGA TTTGTCAAAGAG TTGNCAAAGTC TCTTA TG TGGGNGGAAATAATTATTNAAGATGTCCCTGGAT GAAGGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C74125               [                                   ACTGCGATCTCCAACCGCTCGATCTCTCGCCGGACG TCCAGATCTGCGGGAGGTAGTCGACCTCGTCGCCGGCGGTGGGGTTTCCGAATCGGGGGCGAAGATGACGGAGGCGTGGGTGCGG ACAANCCCGGGATGGCGAGCGTNAAGGACATGCCGGTGCTGCAGGACGGG CGCCG CGGGC GT T TCGCG CCGT GCNCNACGngnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSR3360A             [                                                                                                                                             GGAGGCGTGGGTGCGGCACAAGCCCGGGATGGCGAGCNTCAAGGACATGCCGGTGCTGCAGGACGGGCCGCCNNCGGGC GCTT TCGCGCCCGT NCGCTACGCNGC CCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGCCTTCG CCTGGGGGATGTACCAGGTTGGCCA GGGGAACA AGGTCCGCCGTGCA CT CAAAGAGGAGAAAATTGCTGCCCGCA CCGCTTTAGTGCCAATGCTCCAAGCTGAAGAAGATTGAAAGA TTTtg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSR3303A             [                                                                                                                                             GGAGGCGTGGGTGCGGCACAAGCCCGGGATGGCGAGCGTCAAGGACATGCCGGTGCTGCAGGACGGGCCGCCGCCGGGC GC TNTCGCGCCCGT NCGCTACGC G GCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGCCTTCG CCTGGGGGATGTACCAGGTTGGCCA GGGGAACA AGGTCCGCCGTGCA CT CAAAGAGGAGAAAATTGCTGCCCGCA CCGCTTTAGTGCCAGTNCTCCAAGCTGAAGAAGA TGAAAGA TTTGTCAAAGAG TGGACAAAGTC TCTTA TG TGGGAGGAAATAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSR3361A             [                                                                                                                                             GGAGGCGTGGGTGCGGCACAAGCCCGGGATGGCGAGCNTCAAGGACATGCCGGTGCTGCAGGACGGGCCGCCNTCGGGC GCTT TCGCGCCCGT NCGCTACGC  NGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGCCTTCG CCTGGGGGATGTACCAGGTTGGCCA GGGGAACA AGGTCCGCCGTNCA CT CAAAGAGGAGAAAATTGCTGCCCGNA CCGCTTTAGTGCCAGTTCTCCAAGCTGAAGAAGA TGAAAGATTTTTTCAAAGAGTTGGACAAAGTCTTCTTATTGTTGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI806131             [                                                                                                                                                                                                                                                                           GGCCC GCGCCATCGCCATCTTCCTCACTA CTTCGGC CCTTCGTCCTGGGGTATGTA CAGGTTGGCCACGGGGAACACAGGTCC CCCT CACCTCCCAAGAGGAG AAATTGCTGCCCGCACCCGCTTTAGTGCCCGTGCTCCCAGCTGNAGAAGA TGAAAGA TTTGTCCAAGAG TGGACCAAGTC TCTTA TG TGGGAGGAAATAATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCCAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACCGGCGAGCTGC TCGTGAAGATTGATGAAATCCCAGGGGCTT CCGCAGCCTACCCAAGATGCCCTCATGTCTTTTGGGCATGCATAAGGCTTTTGAACCCAGAATACCCCAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCNCT CGCTGTGCCTTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGACATGTCCAACCAGACCTTTGTTTCACCTGAACTATGCTCTTTTNTGGACGGAAaaaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU032051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAAAAATTGCTACGNGGAACTCACTCTTAAAGCACTCCGCTGTGCATTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGACATGN CAAACAGCCATTT TTTCACATGANCTATGCTCTTTTGTGGACGGAACATCTGTTTTGCCCTGATGTTCTCCCTTCTCTATGTTTTATTTTTTTCTACTCTGTCCTAAGCACTTCTTGGTCAGTGCTTTNCCTTACTGTAAACATTCGAATGTATTCAGTCTTTTTAGACAAAGACACAGGAGGAACATTCAATGTCAAGCGCTTGGATCGGATGGGTATATTACCGAGATNGTGAACGGAAAACTCAAGAAGTCAGAATCAAGCCCGTGATCAGATAGGGAGAGCCAAAACAGTGTCACTGCGTACTAGNGATAAATGAACAAGCAAAAGGCAACTCAAGAAGTCAGAATCAAGCACGTGATCAGATAGAGAGAGCCAAAGAGCCAAAACAGCGCCACTGCATGCGTACAGGNGATAAATGAACAAGCAAAAGGCGACCGATAATATGTATTCCATTCGTTTTATAATGTAAGACTTTTTAGCCTTGCCNACATACATATAGATGTTAAAAAAAAAAAAA]
[+] EMBL AU173479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTCTACTCTGTACTAAGCACTTNTTGGTCAGTGCTTTACCTTACTGTAAACATTCGAATGTATTCAGTCTTTTTAGACAAAGACACAGGAGGAACATTCAATGTCAAGCGCTTGGATCGGATGGGTATATTACCGAGATAGTGAACGGAAAACTCAAGAAGTCAGAATCAAGCCCGTGATCAGATAGGGAGAGCCAAAACAGTGTCNCTGCGTACTAGAGATAAATGAACAAGCAAAAGGCAACTCAAGAAGTCAGAATCAAGCACGTGATCAGATAGAGAGAGCCAAAGAGCCAAAACAGCGCCNCTGCATGCGTACAGGAGATAAATGAACAAGCAAAAGGCGNCCGATAATATGTATTCCATTCGTTTTATAATGTAAGACTTTTTAGCCTTGCCCACATACATATAGATGTTNAAAAAAAAAAAA]
[+] EMBL AU173496             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCAAGCGCTTGGATCGGATGGGTATATTACCGAGATAGTGAACGGAAAACTCAAGAAGTCAGAATCAAGCCCGTGATCAGATAGGGAGAGCCAAAACAGTGTCNCTGCGTACTAGAGATAAATGAACAAGCAAAAGGCAACTCAAGAAGTCAGAATCAAGCACGTGATCAGATAGAGAGAGCCAAAGAGCCAAAACAGCGCCNCTGCATGCGTACAGGAGATAAATGAACAAGCAAAAGGCGNCCGATAATATGTATTCCATTCGTTTTATAATGTAAGACTTTTTAGCCTTGCCCNCATACATATAGATGTTAAAAAAAAAAAAA]


>consensus_13858#0 GTCTCGCCTTGCCCCGTCCACTAACCCTAGCGGCAACTGCGATCTCCAACCGCTCGATCT CTCGCCGGAGGTTCCAGATCTGCGGGAGGTAGTCGACCTCGTCGCCGGCGGTGGGGTTTC CGAATCGGGGGCGAAGATGACGGAGGCGTGGGTGCGGCACAAGCCCGGGATGGCGAGCNT CAAGGACATGCCGGTGCTGCAGGACGGGCCGCCGCCGGGCGCTTCGCGCCCGTNCGCTAC GCGCGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGC GCCTTCGCCTGGGGGATGTACCAGGTTGGCCAGGGGAACAAGGTCCGCCGTGCACTCAAA GAGGAGAAAATTGCTGCCCGCACCGCTTTAGTGCCAGTGCTCCAAGCTGAAGAAGATGAA AGATTTGTCAAAGAGTGGACAAAGTCTCTTATGTGGGAGGAAATAATTATGAAAGATGTC CCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACC GGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCTACCAAAGAT GCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAACCAGAATACCCAAAAAAAATTGC TACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTGTTGATGAAATCTTGGC TAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTATGCTCTTTTGTGGACG GAACATCTGTTTTGCCCTGATGTTCTCCCTTCTCTATGTTTTATTTTTTTCTACTCTGTA CTAAGCACTTCTTGGTCAGTGCTTTACCTTACTGTAAACATTCGAATGTATTCAGTCTTT TTAGACAAAGACACAGGAGGAACATTCAATGTCAAGCGCTTGGATCGGATGGGTATATTA CCGAGATAGTGAACGGAAAACTCAAGAAGTCAGAATCAAGCCCGTGATCAGATAGGGAGA GCCAAAACAGTGTCNCTGCGTACTAGAGATAAATGAACAAGCAAAAGGCAACTCAAGAAG TCAGAATCAAGCACGTGATCAGATAGAGAGAGCCAAAGAGCCAAAACAGCGCCNCTGCAT GCGTACAGGAGATAAATGAACAAGCAAAAGGCGNCCGATAATATGTATTCCATTCGTTTT ATAATGTAAGACTTTTTAGCCTTGCCCACATACATATAGATGTTAAAAAAAAAAAAA



consensusID : consensus_13858#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 687
fasta sequence
                              [CGGCCGGTGGGGTTNCCGAATCGGGGNCGAANATTGCCGAAGGCGTGGGTCCGGCACAAGCCCGGGATGCCAAGCGTCAAGGACATGCCGGTCTGCAGGACGGCCGCCGCCGGCGGCTTCGCGCCCGTGCGGCTACGCGCGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGCCTTCGCCTGGGGGATGTACCAGGTTGGCCAGGGGAACAAGGTCCGCCGTGCACTCAAAGAGGAGAAAATTGCTGCCCGCACCGCTTTAGTGCCAGTGCTCCAAGCTGAAGAAGATGAAAGATTTGTCAAAGAGTGGACAAAGTCTCTTATGTGGGAGGAAATAATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGC-TTTTGAACCAGAATACCCAAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTATGCTCTTTTGTGGAAAAAAAAAAAAAA]

[+] EMBL AU101395             [CGGCCGGTGGGGTTNCCGAATCGGGGNCGAANATTGCCGAAGGCGTGGGTCCGGCACAAGCCCGGGATGCCAAGCGTCAAGGACATGCCGGTCTGCAGGACGGCCGCCGCCGGCGGCTTCGCGCCCGTGCGGCTACGCGCGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCGGCGCCTTCGCCTGGGGGATGTACCAGGTTGGCCAGGGGAACAAGGTCCGCCGTGCACTCAAAGAGGAGAAAATTGCTGCCCGCACCGCTTTAGTGCCAGTGCTCCAAGCTGAAGAAGATGAAAGATTTGTCAAAGAGTGGACAAAGTCTCTTATGTGGGAGGAAATAATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGC TTTTGAACCAGAATACCCAAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTATGCTCTTTTGTGGAAAAAAAAAAAAAA]
[+] EMBL CB679210             [                                                                                                                                                                                                                                                                                                                                                                                                                                      TGCCTTTAGGCACCGGCGAGCTGCGTCTTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCGTTTTGAACCAGAATACCCAAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTATGC                        ]


>consensus_13858#1 CGGCCGGTGGGGTTNCCGAATCGGGGNCGAANATTGCCGAAGGCGTGGGTCCGGCACAAG CCCGGGATGCCAAGCGTCAAGGACATGCCGGTCTGCAGGACGGCCGCCGCCGGCGGCTTC GCGCCCGTGCGGCTACGCGCGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTT CCTCACTACCTTCGGCGCCTTCGCCTGGGGGATGTACCAGGTTGGCCAGGGGAACAAGGT CCGCCGTGCACTCAAAGAGGAGAAAATTGCTGCCCGCACCGCTTTAGTGCCAGTGCTCCA AGCTGAAGAAGATGAAAGATTTGTCAAAGAGTGGACAAAGTCTCTTATGTGGGAGGAAAT AATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATG GATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCC GCAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAACCAGAAT ACCCAAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTG TTGATGAAATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTA TGCTCTTTTGTGGAAAAAAAAAAAAAA



consensusID : consensus_13858#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 463
fasta sequence
                              [CAGGTGCCAGGGAAAAAGTCCGCCNTGTCAACTCAAAAGNGGGGAGGAAAAATTTGCTGCCCCGCAACCGCTTTTAGTGCCAGTGCTCCCAAGCTGAAGAAGTTGAAAGATTTGTCAAAGAGTGGACAAAGTTCTCTTATGTGGAGGAAATAATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAACCAGAATACCCAAAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTAAAAAAAAAAAA]

[+] EMBL AU097406             [CAGGTGCCAGGGAAAAAGTCCGCCNTGTCAACTCAAAAGNGGGGAGGAAAAATTTGCTGCCCCGCAACCGCTTTTAGTGCCAGTGCTCCCAAGCTGAAGAAGTTGAAAGATTTGTCAAAGAGTGGACAAAGTTCTCTTATGTGGAGGAAATAATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAACCAGAATACCCAAAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTAAAAAAAAAAAA]


>consensus_13858#2 CAGGTGCCAGGGAAAAAGTCCGCCNTGTCAACTCAAAAGNGGGGAGGAAAAATTTGCTGC CCCGCAACCGCTTTTAGTGCCAGTGCTCCCAAGCTGAAGAAGTTGAAAGATTTGTCAAAG AGTGGACAAAGTTCTCTTATGTGGAGGAAATAATTATGAAAGATGTCCCTGGATGGAAGG TCGGCCAAAGTGTCTATAATTCCGGGAAATGGATGCCTCCTGCCACCGGCGAGCTGCGTC GTGAAGATTGATGAAATCCAAGGGGCTTGCCGCAGCCTACCAAAGATGCCATCATGTCTT TTGGGCATGCATAAGGCTTTTGAACCAGAATACCCAAAAAAAAATTGCTACGAGGAACTC ACTCTTAAAGCACTCGCTGTGCATTTGTTGTGTTGATGAAATCTTGGCTAATAATTGGAC ATGTCAAACAGACATTTGTTTCACATGAACTAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13858#0      GTCTCGCCTTGCCCCGTCCACTAACCCTAGCGGCAACTGCGATCTCCAACCGCTCGATCT 60
consensus_13858#1      ------------------------------------------------------------
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      CTCGCCGGAGGTTCCAGATCTGCGGGAGGTAGTCGACCTCGTCGCCGGCGGTGGGGTTTC 120
consensus_13858#1      --------------------------------------------CGGCCGGTGGGGTTNC 16
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      CGAATCGGGGGCGAAGAT-GACGGAGGCGTGGGTGCGGCACAAGCCCGGGATGGCGAGCN 179
consensus_13858#1      CGAATCGGGGNCGAANATTGCCGAAGGCGTGGGTCCGGCACAAGCCCGGGATGCCAAGCG 76
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      TCAAGGACATGCCGGTGCTGCAGGACGGGCCGCCGCCGGGCGCTTCGCGCCCGTNCG-CT 238
consensus_13858#1      TCAAGGACATGCCGGT-CTGCAGGACGG-CCGCCGCCGGCGGCTTCGCGCCCGTGCGGCT 134
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      ACGCGCGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCG 298
consensus_13858#1      ACGCGCGCCGGATCCCCACCAAGGGGCCCAGCGCCATCGCCATCTTCCTCACTACCTTCG 194
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      GCGCCTTCGCCTGGGGGATGTACCAGGTTGGCCAGGGGAACAAGGTCCGCCGTGC--ACT 356
consensus_13858#1      GCGCCTTCGCCTGGGGGATGTACCAGGTTGGCCAGGGGAACAAGGTCCGCCGTGC--ACT 252
consensus_13858#2      -----------------------CAGGT--GCCAGGGAAA--AAGTCCGCCNTGTCAACT 33
                                              *****  ******* **  * ******* **   ***

consensus_13858#0      CAAA------GAGGAGAAAATTGCTGCCC-GCA-CCGCTTT-AGTGCCAGTGCTCC-AAG 406
consensus_13858#1      CAAA------GAGGAGAAAATTGCTGCCC-GCA-CCGCTTT-AGTGCCAGTGCTCC-AAG 302
consensus_13858#2      CAAAAGNGGGGAGGAAAAATTTGCTGCCCCGCAACCGCTTTTAGTGCCAGTGCTCCCAAG 93
                       ****      ***** *** ********* *** ******* ************** ***

consensus_13858#0      CTGAAGAAGATGAAAGATTTGTCAAAGAGTGGACAAAGT-CTCTTATGTGGGAGGAAATA 465
consensus_13858#1      CTGAAGAAGATGAAAGATTTGTCAAAGAGTGGACAAAGT-CTCTTATGTGGGAGGAAATA 361
consensus_13858#2      CTGAAGAAGTTGAAAGATTTGTCAAAGAGTGGACAAAGTTCTCTTATGTGG-AGGAAATA 152
                       ********* ***************************** *********** ********

consensus_13858#0      ATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGG 525
consensus_13858#1      ATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGG 421
consensus_13858#2      ATTATGAAAGATGTCCCTGGATGGAAGGTCGGCCAAAGTGTCTATAATTCCGGGAAATGG 212
                       ************************************************************

consensus_13858#0      ATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCG 585
consensus_13858#1      ATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCG 481
consensus_13858#2      ATGCCTCCTGCCACCGGCGAGCTGCGTCGTGAAGATTGATGAAATCCAAGGGGCTTGCCG 272
                       ************************************************************

consensus_13858#0      CAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAACCAGAATA 645
consensus_13858#1      CAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAACCAGAATA 541
consensus_13858#2      CAGCCTACCAAAGATGCCATCATGTCTTTTGGGCATGCATAAGGCTTTTGAACCAGAATA 332
                       ************************************************************

consensus_13858#0      CCCAAAAAAAA-TTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTG 704
consensus_13858#1      CCCAAAAAAAA-TTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTG 600
consensus_13858#2      CCCAAAAAAAAATTGCTACGAGGAACTCACTCTTAAAGCACTCGCTGTGCATTTGTTGTG 392
                       *********** ************************************************

consensus_13858#0      TTGATGAAATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTA 764
consensus_13858#1      TTGATGAAATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTA 660
consensus_13858#2      TTGATGAAATCTTGGCTAATAATTGGACATGTCAAACAGACATTTGTTTCACATGAACTA 452
                       ************************************************************

consensus_13858#0      TGCTCTTTTGTGGACGGAACATCTGTTTTGCCCTGATGTTCTCCCTTCTCTATGTTTTAT 824
consensus_13858#1      TGCTCTTTTGTGGAAAAAAAAAAAAAA--------------------------------- 687
consensus_13858#2      -----------AAAAAAAAAAA-------------------------------------- 463
                                    *   ** *                                       

consensus_13858#0      TTTTTTCTACTCTGTACTAAGCACTTCTTGGTCAGTGCTTTACCTTACTGTAAACATTCG 884
consensus_13858#1      ------------------------------------------------------------
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      AATGTATTCAGTCTTTTTAGACAAAGACACAGGAGGAACATTCAATGTCAAGCGCTTGGA 944
consensus_13858#1      ------------------------------------------------------------
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      TCGGATGGGTATATTACCGAGATAGTGAACGGAAAACTCAAGAAGTCAGAATCAAGCCCG 1004
consensus_13858#1      ------------------------------------------------------------
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      TGATCAGATAGGGAGAGCCAAAACAGTGTCNCTGCGTACTAGAGATAAATGAACAAGCAA 1064
consensus_13858#1      ------------------------------------------------------------
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      AAGGCAACTCAAGAAGTCAGAATCAAGCACGTGATCAGATAGAGAGAGCCAAAGAGCCAA 1124
consensus_13858#1      ------------------------------------------------------------
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      AACAGCGCCNCTGCATGCGTACAGGAGATAAATGAACAAGCAAAAGGCGNCCGATAATAT 1184
consensus_13858#1      ------------------------------------------------------------
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      GTATTCCATTCGTTTTATAATGTAAGACTTTTTAGCCTTGCCCACATACATATAGATGTT 1244
consensus_13858#1      ------------------------------------------------------------
consensus_13858#2      ------------------------------------------------------------
                                                                                   

consensus_13858#0      AAAAAAAAAAAAA 1257
consensus_13858#1      -------------
consensus_13858#2      -------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)