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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13871#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 953 fasta sequence
[GACACTGCATGGACTGAGGAGTAGAAAAGAAAAGAGAGAGCAGCAGCGAGAGACGAACAAAAAACAGAATCCATCGCCATAATCGAAGGTTCGCTCTTGCTTCCACCCCGCAATCCACATGGAGAACGAATTCCAGGATGGTAAGACGGAGGTGATAGAAGCATGGTACATGG-ATGATAGCGAAGAGGACCAGAGGCTTCCTCATCACCGCGAACCCAAAGAATTCATTCATGTTGATAAGCTTACAGAACTAGGAGTAATCAGCTGGCGCCTAAATCCTGATAACTGGGAGAATTGCGAGAACCTGAAGAGAATCCGCGAAGCCAG-AGGTTACTC-TTATGT-GGACATTTGTG-ATGTGTGCCCAGA-GAAGCTGCCAAATTATGAAACTAAGAT-CAAGAGTTTCTTTGAAGAACACCTGCATACCGATGAAGAAATACGCTATTGTCTTGAAGGGAGTGGATACTTTGATGTGAGAGACCAAAA-TGATCAGTGGATTCGTATAGCACTGAAGAAAGGAGGCATGATTGTTCTGCCTGCAGGGATGTACCACCGCTTTACGTTGGACACCGACAACTATATCAAGGCAATGCGACTGTTTGTTGGCGATCCTGTTTGGACACCCTACAACCGTCCCCATGACCATCTTCCTGCAAGAAAGGAGTTTTTGGCTAAACTTCTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTCTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTCTATATTCAACCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCACAGTGGCTATGGTCGCCACTCACCAACTTGAAGTGAAAGATTTAATGATTTTTGTTAATTCTTATGTATCAATCGGCATATAGCATTTCCGAAATGTGTTTTCAATAAACAGAAAGTAAGAGTCATGAAGCTGAAAATGAACAAAATTTCTCAAAAAAA]
[+] EMBL CF322075 [GACACTGCATGGACTGAGGAGTAGAAAAGAAAAGAGAGAGCAGCAGCGAGAGACGAACAAAAAACAGAATCCATCGCCATAATCGAAGGTTCGCTCTTGCTTCCACCCCGCAATCCACATGGAGAACGAATTCCAGGATGGTAAGATGGAGGTGATAGAAGCATGGTACATGG ATGATAGCGAAGAGGACCAGAGGCTTCCTCATCACCGCGAACCCAAAGAATTCATTCATGTTGATAAGCTTACAGAACTAGGAGTAATCAGCTGGCGCCTAAATCCTGATAACTGGGAGAATTGCGAGAACCTGAAGAGAATCCGCGAAGCCAG AGGTTACTC TTATGT GGACATTTGTG ATGTGTGCCCAGA GAAGCTGCCAAATTATGAAACTAAGAT CAAGAGTTTCTTTGAAGAACACCTGCATACCGATGAAGAAATACGCTATTGTCTTGAAGGGAGTGGATACTTTGATGTGAGAGACCAAAA TGATCAGTGGATTCGTATAGC ]
[+] EMBL AK102331 [ GAGAGCAGCAGCGAGAGACGAACAAAAAACAGAATCCATCGCCATAATCGAAGGTTCGCTCTTGCTTCCACCCCGCAATCCACATGGAGAACGAATTCCAGGATGGTAAGACGGAGGTGATAGAAGCATGGTACATGG ATGATAGCGAAGAGGACCAGAGGCTTCCTCATCACCGCGAACCCAAAGAATTCATTCATGTTGATAAGCTTACAGAACTAGGAGTAATCAGCTGGCGCCTAAATCCTGATAACTGGGAGAATTGCGAGAACCTGAAGAGAATCCGCGAAGCCAG AGGTTACTC TTATGT GGACATTTGTG ATGTGTGCCCAGA GAAGCTGCCAAATTATGAAACTAAGAT CAAGAGTTTCTTTGAAGAACACCTGCATACCGATGAAGAAATACGCTATTGTCTTGAAGGGAGTGGATACTTTGATGTGAGAGACCAAAA TGATCAGTGGATTCGTATAGCACTGAAGAAAGGAGGCATGATTGTTCTGCCTGCAGGGATGTACCACCGCTTTACGTTGGACACCGACAACTATATCAAGGCAATGCGACTGTTTGTTGGCGATCCTGTTTGGACACCCTACAACCGTCCCCATGACCATCTTCCTGCAAGAAAGGAGTTTTTGGCTAAACTTCTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTCTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTCTATATTCAACCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCACAGTGGCTATGGTCGCCACTCACCAACTTGATGTGAAAGATTTAATGATTTTTGTTAATTCTTATGTATCAATCGGCATATAGCATTTCCGAAATGTGTTTTCAATAAACAGAAAGTAAGAGT ]
[+] EMBL AK103834 [ GCAGCGAGAGACGAACAAAAAACAGAATCCATCGCCATAATCGAAGGTTCGCTCTTGCTTCCACCCCGCAATCCACATGGAGAACGAATTCCAGGATGGTAAGACGGAGGTGATAGAAGCATGGTACATGG ATGATAGCGAAGAGGACCAGAGGCTTCCTCATCACCGCGAACCCAAAGAATTCATTCATGTTGATAAGCTTACAGAACTAGGAGTAATCAGCTGGCGCCTAAATCCTGATAACTGGGAGAATTGCGAGAACCTGAAGAGAATCCGCGAAGCCAG AGGTTACTC TTATGT GGACATTTGTG ATGTGTGCCCAGA GAAGCTGCCAAATTATGAAACTAAGAT CAAGAGTTTCTTTGAAGAACACCTGCATACCGATGAAGAAATACGCTATTGTCTTGAAGGGAGTGGATACTTTGATGTGAGAGACCAAAA TGATCAGTGGATTCGTATAGCACTGAAGAAAGGAGGCATGATTGTTCTGCCTGCAGGGATGTACCACCGCTTTACGTTGGACACCGACAACTATATCAAGGCAATGCGACTGTTTGTTGGCGATCCTGTTTGGACACCCTACAACCGTCCCCATGACCATCTTCCTGCAAGAAAGGAGTTTTTGGCTAAACTTCTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTCTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTCTATATTCAACCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCACAGTGGCTATGGTCGCCACTCACCAACTTGAAGTGAAAGATTTAATGATTTTTGTTAATTCTTATGTATCAATCGGCATATAGCATTTCCGAAATGTGTTTTCAATAAACAGAAAGTAAGAGTCATGAAGCTGAAAATGAAC ]
[+] EMBL C27474 [ GAGACGAACAAAAAACAGAATCCATCGCCATAATCGAAGGTTCGCTCTTGCTTCCACCCCGCAATCCACATGGAGAACGAATTCCAGGATGGTAAGACGGAGGTGATAGAAGCATGGTACATGG ATGATAGCGAAGAGGACCAGAGGCTTCCTCATCACCGCGAACCCAAAGANTTCATTCATGTTGATAAGCTTACAGAACTAGGAGTAATCAGCTGGCGCCTAAATCCTGATAACTGGGAGANTTGCGAGAACCTGAAGAGAATCCGCGAAG CAG AGGTTACTC TTATGT GGACATTTGTGAATGTGTGCCCAGAGGAAGCTGCCAAATTATGAAACTAAGAT CAAGAGNTTCTTTGANGAACACCTGCATACCGATGAAGGAATACGCTATTGTCTTGAAGGGAGTGGATACTTTGATGTTAGGGACC AAA TGATCANTGGt ]
[+] EMBL C28694 [ AGACGAACAAAAAACAGAATCCATCGCCATAATCGAAGGTTCGCTCTTGCTTCCACCCCGCAATCCACATGGAGAACGAATTCCAGGATGGTAAGACGGAGGTGATAGAAGCATGGTACATGGNATGATAGCGAAGAGGACCAGAGGCTTCCTCATCACCGCGAACCCAAAGAATTCATTCATGTTGATAAGCTTACAGAACTAGGAGTAATCAGCTGGCGCCTAAATCCTGATAACTGGGAGATTTGCGAGAACCTNAGGAGATTCCGCG AGCCAGAAGGTTACTCNTTATGT TGGCAATTtt ]
[+] EMBL C28663 [ ACGAACAAAAAACAGAATCCATCGCCATAATCGAAGGTTCGCTCTTGCTTCCACCCCGCAATCCACATGGAGAACGAATTCCAGGATGGTAAGACGGAGGTGATAGAAGCATGGTACATGGAATGATAGCGAAGAGGACCAGAGGCTTCCTCATCACCGCGAACCCAAAGAATTCATTCATGTTGATAAGCTTACAGAACTAGGAGTAATCAGCTGGCGCCTAAATCCTGATAACTGGGAGAATTGCGAGAACCTGAAGAGAATCCGCGAAGCAAG AGGTTACTC TTATGTGGGACATTTGTN ATGTGTGCCCAGA GAAGCTGCCAAATTATGAAACTAAGAT CAAGAGTTTCTTTGAAGGACACCTGCATACCGATGAAGGAATACGCTATTGTNTTGAAGGGAGTTGGTACTTTGATGTTAGGGGCCAAAA TGATCAGTGGATTCG ]
[+] EMBL AF050200 [ AAAAACAGAATCCATCGCCATAATCGAAGGTTCGCTCTTGCTTCCACCCCGCAATCCACATGGAGAACGAATTCCAGGATGGTAAGACGGAGGTGATAGAAGCATGGTACATGG ATGATAGCGAAGAGGACCAGAGGCTTCCTCATCACCGCGAACCCAAAGAATTCATTCCTGTTGATAAGCTTACAGAACTAGGAGTAATCAGCTGGCGCCTAAATCCTGATAACTGGGAGAATTGCGAGAACCTGAAGAGAATCCGCGAAGCCAG AGGTTACTC TTATGT GGACATTTGTG ATGTGTGCCCAGA GAAGCTGCCAAATTATGAAACTAAGAT CAAGAGTTTCTTTGAAGAACACCTGCATACCGATGAAGAAATACGCTATTGTCTTGAAGGGAGTGGATACTTTGATGTGAGAGACCAAAA TGATCAGTGGATTCGTATAGCACTGAAGAAAGGAGGCATGATTGTTCTGCCTGCAGGGATGTACCACCGCTTTACGTTGGACACCGACAACTATATCAAGGCAATGCGACTGTTTGTTGGCGATCCTGTTTGGACACCCTACAACCGTCCCCATGACCATCTTCCTGCAAGAAAGGAGTTTTTGGCTAAACTTCTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTCTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTCTATATTCAACCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCACAGTGGCTATGGTCGCCACTCACCAACTTGAAGTGAAAGATTTAATGATTTTTGTTAATTCTTATGTATCAATCGGCATATAGCATTTCCGAAATGTGTTTTCAATAAACAGgagtca ]
[+] EMBL CF310754 [ GAATCCATCGCCATAATCGAAGGTTCGCTCTTGCTTCCACCCCGCAATCCACATGGAGAACGAATTCCAGGATGGTAAGACGGAGGTGATAGAAGCATGGTACATGG ATGATAGCGAAGAGGACCAGAGGCTTCCTCATCACCGCGAACCCAAAGAATTCATTCATGTTGATAAGCTTACAGAACTAGGAGTAATCAGCTGGCGCCTAAATCCTGGTAACTGGGAGAATTGCGAGAACCTGAAGAGAATCCGCGAAGCCAG AGGTTACTC TTATGT GGACATTTGTG ATGTGTGCCCAGA GAAGCTGCCAAATTATGAAACTAAGAT CAAGAGTTTCTTTGAAGAACACCTGCATACCGATGAAGAAATACGCTATTGTCTTGAAGGGAGTGGATACTTTGATGTGAGAGACCAAAA TGATCAGTGGATTCGTATATCACTGAAGAAAGGAGGCATGATTGTTCTGCCTGCAGGGATGTACCACCGCTTTACGTTGGACACCGACAACTATATCAAGGCAATGCGACTGTTTGTTGGCGATCCTGTTTGGACACC ]
[+] EMBL AU100980 [ anA GAAGCTGCCAAATTATG AACTAAGATCCAAGAGTTTCTTTGAAGAACACNTGCATACCGATGAAGAAATACGCTATTGTCTTGAAGGAAGTGGATACTTTGATGTGAGAGACCAAAA TGATCAGTGGATTCGTATAGCACTGAAGAAAGGAGGCATGATTGTTCTGCCTGCAGGGATGTACCACCGCTTTACGTTGGACACCGACAACTATATCAAGGCAATGCGACTGTTTGTTGGCGATCCTGTTTGGACACCCTACAACCGTCCCCATGACCATCTTCCTGCAAGAAAGGAGTTTTTGGCTAAACTTCTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTCTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTCTATATTCAACCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCACAGTGGCTATGGTCGCCACTCACCAACTTGAAGTGAAAGATTTAATGATTTTTGTTAATTCTTATGTATCAATCGGCATATAGCATTTCCGAAATGTGTTTTCAATAAACAGAAAGTAAGAGTCATGAAGCTGAAAATGAACAAAATTTCTCAAAAAA ]
[-] EMBL CF322076 [ TGAAGAAATACGCTATTGTCTTGAAGGGAGTGGATACTTTGATGTGAGAGACCAAAA TGATCAGTGGATTCGTATAGCACTGAAGAAAGGAGGCATGATTGTTCTGCCTGCAGGGATGTACCACCGCTTTACGTTGGACACCGACAACTATATCAAGGCAATGCGACTGTTTGTTGGCGATCCTGTTTGGACACCCTACAACCGTCCCCATGACCATCTTCCTGCAAGAAAGGAGTTTTTGGCTAAACTTCTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTCTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTCTATATTCAACCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCACAGTGGCTATGGTCGCCAATCACCAACTTGAAGTGAAAGATTTAATGATTTTTGTTAATTCTTATGTATCAATCGGCATATAGCATTTCCGAAATGTGTTTTCAATAAACAGAAAGTAAGAGTCATGAAGCTGAAAATGAACAAAATTTCTCAAAAAA ]
[-] EMBL CF310755 [ GAAGAAATACGCTATTGTCTTGAAGGGAGTGGATACTTTGATGTGAGAGACCAAAATTGATCAGTGGATTCGTATATCACTGAAGAAAGGAGGCATGATTGTTCTGCCTGCAGGGATGTACCACCGCTTTACGTTGGACACCGACAACTATATCAAGGCAATGCGACTGTTTGTTGGCGATCCTGTTTGGACACCCTACAACCGTCCCCATGACCATCTTCCTGCAAGAAAGGAGTTTTTGGCTAAACTTCTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTCTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTCTATATTCAACCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCACAGTGGCTATGGTCGCCACTCACCAACTTGAAGTGAAAGATTTAATGATTTTTGTTAATTCTTATGTATCAATCGGCATATAGCATTTCCGAAATGTGTTTTCAATAAACAGAAAGTAAGAGTCATGAAGCTGGAAATGAACAAAATTTCTCAAAAAAA]
[-] EMBL CF318313 [ GATTGTTCTGCCTGCAGGGATGTACCACCGCTTTACGTTGGACACCGTCAACTATATCAAGGCAATGCGACTGTTTGTTGGCGATCCTGTTTGGACACCCTACAACCGTCCCCATGACCATCTTCCTGCAAGAAAGGAGTTTTTGGATAAACTTTTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTTTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTGTATATTCAACCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCCCAGTGGTTATGGTCGCCACTCACCA ]
[+] EMBL AU161404 [ ATCTTCCTGCAAGAAAGGAGTTTTTGGCTAAACTTCTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTCTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTCTATATTCAACCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCACAGTGGCTATGGTCGCCACTCACCAACTTGAAGTGAAAGATTTAATGATTTTTGTTAATTCTTATGTATCAATCGGCATATAGCATTTCCGAAATGTGTTTTCAATAAACAGAAAGTAAGAGTCATGAAGCTGAAAATGAACAAAATTTCTCAAAAAAA]
[+] EMBL AU160851 [ TCCTGCAAGAAAGGAGTTTTTGGCTAAACTTCTCAAGTCAGAAGGTGAAAATCAAGCAGTTGAAGGCTTCTGAGGGTTTTGTTGGGCTCCTGCACTGCGGTTCTATATTCANCCTGAATAAGATGTGCTATAGCAATGTAAATTTAGCACAGTGGCTATGGTCGCCACTCACCAACTTGAAGTGAAAGATTTAATGATTTTTGTTAATTCTTATGTATCAATCGGCATATAGCATTTCCGAAATGTGTTTTCAATAAACAGAAAGTAAGAGTCATGAAGCTGAAAATGAACAAAATTTCTCAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||