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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13875#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1552 fasta sequence
[ATCAGTTTTCTTGGCCTGAACATTGCAAGAATTACTTGTCAAGGATATCAACTCTTGGCCCAAGGCATCCTGCTTTTGCAAGCAATGAAGACCGGATTAAGGCACCTATTAAGGGAAGGAAGCATGTCACTGTTATTGCTGTAGATTCTGTCAGTAAGGAAGATCTGATTCGCATTGTCAGAAATTCTATCGAGGCTGCACGTAAAGAAAATTTGTCAGGATCGACAGGTTTTGTGTTGTCAACTTCCCTGACAATAGGGGAGATACATTCTCTATTAATGTCTGCTGGCATGCTTCCTACTGATTTCGATGCTTTCATATGCAATAGTGGAAGTGATTTGTATTATCCTTCATGTACTGGTGATACACCAAGCAACTCCCGTGTTACATTTGCATTAGATCGTAGTTACCAATCACATATAGAGTATCATTGGGGAGGAGAAGGTTTAAGGAAATATCTAGTGAAGTGGGCTTCTTCCGTGGTAGAAAGAAGAGGGAGGATTGAAAAACAAGTTATCTTCGAAGATCCAGAGCACTCTTCAACATACTGTCTTGCATTTAAAGTGGTCAATCCAAATCATTTACCTCCTTTAAAGGAGCTGCAAAAGTTGATGAGAATTCAGTCACTCCGTTGTCACGCTCTGTATAACCATGGTGCTACCAGACTATCTGTAATTCCAATCCACGCATCACGGTCTAAGGCTCTAAGGTACTTATCTGTTCGCTGGGGCATAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCCTTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAGCTTGCAATTTCCCTTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGACCATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCGTGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCAAAGTTTTGTTGAGATCAATGCATTTATGTTGTTTGTCCTTGGATGGGCAAAGATTAGTACTAAAAAAAAGA]
[+] EMBL CB000534 [ATCAGTTTTCTTGGCCTGAACATTGCAAGAATTACTTGTCAAGGATATCAACTCTTGGCCCAAGGCATCCTGCTTTTGCAAGCAATGAAGACCGGATTAAGGCACCTATTAAGGGAAGGAAGCATGTCACTGTTATTGCTGTAGATTCTGTCAGTAAGGAAGATCTGATTCGCATTGTCAGAAATTCTATCGAGGCTGCACGTAAAGAAAATTTGTCAGGATCGACAGGTTTTGTGTTGTCAACTTCCCTGACAATAGGGGAGATACATTCTCTATTAATGTCTGCTGGCATGCTTCCTACTGATTTCGATGCTTTCATATGCAATAGTGGAAGTGATTTGTATTATCCTTCATGTACTGGTGATACACCAAGCAACTCCCGTGTTACATTTGCATTAGATCGTAGTTACCAATCACATATAGAGTATCATTGGGGAGGAGAAGGTTTAAGGAAATATCTAGTGAAGTGGGCTTCTTCCGTGGTAGAAAGAAGAGGGAGGATTGAAAAACAAGTTATCTTCGAAGATCCAGAGCACTCTTCAACATACTGTCTTGCATTTAAAGTGGTCAATC ]
[+] EMBL CB641942 [ TTTGCAAGCAATGAAGACCGGATTAAGGCACCTATTAAGGGAAGGAAGCATGTCACTGTTATTGCTGTAGATTCTGTCAGTAAGGAAGATCTGATTCGCATTGTCAGAAATTCTATCGAGGCTGCACGTAAAGAAAATTTGTCAGGATCGACAGGTTTTGTGTTGTCAACTTCCCTGACAATAGGGGAGATACATTCTCTATTAATGTCTGCTGGCATGCTTCCTACTGATTTCGATGCTTTCATATGCAATAGTGGAAGTGATTTGTATTATCCTTCATGTACTGGTGATACACCAAGCAACTCCCGTGTTACATTTGCATTAGATCGTAGTTACCAATCACATATAGAGTATCATTGGGGAGGAGAAGGTTTAAGGAAATATCTAGTGAAGTGGGCTTCTTCCGTGGTAGAAAGAAGAGGGAGGATTGAAAAACAAGTTATCTTCGAAGATCCAGAGCACTCTTCAACATACTGTCTTGCATTTAAAGTGGTCAATCCAAATCATTTACCTCCTTTAAAGGAGCTGCAAAAGTTGATGAGAATTCAGTCACTCCGTTGTCACGCTCTGTATAACCATGGTGCTACCAGACTATCTGTAATTCCAATCCACGCATCACGGTCTAAGGCTCTAAGGTACTTATCTGTTCGCTGGGGCATAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAAGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGG ]
[+] EMBL CB641944 [ TTGCAAGCAATGAAGACCGGATTAAGGCTCCTATTAAGGGAAGGAAGCATGTCACTGTTATTGCTGAATATTCTGTCAGTAAGGAAGATCTGATTCGCATTGTCAGAAATTCTATCGAGGCTGCACGTAAAGAAAATTTGTCAGGATCGACAGGTTTTGTGTTGTCAACTTCCCTGACAATAGGGGAGATACATTCTCTATTAATGTCTGCTGGCATGCTTCCTACTGATTTCGATGCTTTCATATGCAATAGAGCAACTGATTTGTATTATCCTTCATGTACTGGTGATACACCAAGCAACTCCCGTGTTACATTTGCATTAGATCGTAGTTACCAATCACATATACAGAATCATTGGGGAGGAGAACGTTTAACGAAATATCTAGTGAAGTGGGCTTCTTCCGTGGTACAAATAACAGGGAGGATTGAAAAACAAGTTATCTTCTAAGATCCACAGCACTCTTCAACATACTGTCTTGCATTTAAAGTGGTCAATCCAAATCATTTACCTCCTTTAAAGGAGCTGCAAAAGTTGATGAGAATTCAGTCACTCCGTTGTCACGCTCTGTATAACCATGGTGCTACCATACTATCTGTAATTCCAATCCACGCATCACGGTCTAAGGCTCTAAGGCACTTATCTGT ]
[+] EMBL CA999208 [ TATTAATGTCTGCTGGCATGCTTCCTACTGATTTCGATGCTTTCATATGCAATAGTGGAAGTGATTTGTATTATCCTTCATGTACTGGTGATACACCAAGCAACTCCCGTGTTACATTTGCATTAGATCGTAGTTACCAATCACATATAGAGTATCATTGGGGAGGAGAAGGTTTAAGGAAATATCTAGTGAAGTGGGCTTCTTCCGTGGTAGAAAGAAGAGGGAGGATTGAAAAACAAGTTATCTTCGAAGATCCAGAGCACTCTTCAACATACTGTCTTGCATTTAAAGTGGTCAATCCAAATCATTTACCTCCTTTAAAGGAGCTGCAAAAGTTGATGAGAATTCAGTCACTCCGTTGTCACGCTCTGTATAACCATGGTGCTACCAGACTATCTGTAATTCCAATCCACGCATCACGGTCTAAGGCTCTAAGGTACTTATCTGTTCGCTGGGGCATAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAG ]
[+] EMBL AK071732 [ AGAAGGTTTAAGGAAATATCTAGTGAAGTGGGCTTCTTCCGTGGTAGAAAGAAGAGGGAGGATTGAAAAACAAGTTATCTTCGAAGATCCAGAGCACTCTTCAACATACTGTCTTGCATTTAAAGTGGTCAATCCAAATCATTTACCTCCTTTAAAGGAGCTGCAAAAGTTGATGAGAATTCAGTCACTCCGTTGTCACGCTCTGTATAACCATGGTGCTACCAGACTATCTGTAATTCCAATCCACGCATCACGGTCTAAGGCTCTAAGGTACTTATCTGTTCGCTGGGGCATAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCCTTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAGCTTGCAATTTCCCTTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGACCATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCGTGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCAAAGTTT ]
[-] EMBL CB635597 [ ACTCTTCAACATACTGTCTTGCATTTAAAGTGGTCAATCCAAATCATTTACCTCCTTTAAAGGAGCTGCAAAAGTTGATGAGAATTCAGTCACTCCGTTGTCACGCTCTGTATAACCATGGTGCTACCAGACTATCTGTAATTCCAATCCACGCATCACGGTCTAAGGCTCTAAGGTACTTATCTGTTCGCTGGGGCATAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTATGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCTCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCCTTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCT ]
[+] EMBL CA755589 [ CTCTAAGGTACTTATCTGTTCGCTGGGGCATAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCCATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCCTTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAGCTTGCAATTTCCCTTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGACCATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCGTGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCNAAGTTTTG ]
[-] EMBL CB638900 [ CTGTTCGCTGGGGCATAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCCTTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAA ]
[-] EMBL CB669304 [ AAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCCTTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAGCTTGCAATTTCCCTTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGACCATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCGTGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCAAAGTTTTGTTGAGATCAATGCATTTATGTTGTTTGTCCTTGGATGGGCAAAGATTAGTACTAAAAAAAAGA]
consensusID : consensus_13875#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 777 fasta sequence
[TAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCC-TTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAGCTTGCAATTTCCC-TTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGACCATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCGTGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCAAAGTTTTGTTGAGATCAAAAAAAAAAAG]
[-] EMBL CB641943 [TAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCC TTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAGCTTGCAATTTCCC TTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGACCATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCGTGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCAAAGTTTTGTTGAGATCAAAAAAAAAAAG]
[-] EMBL CB645119 [ AGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCC TTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAGCTTGCAATTTCCCTTTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGACCATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCGTGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCAAAGTTTT ]
[-] EMBL CB649252 [ AAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAGATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACACATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTGATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGAAACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCC TTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAGCTTGCAATTTCCC TTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGACCATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCGTGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCAAAGTTTT ]
[+] EMBL CF328390 [ AGTGACACCAAGCCCCCATCTGTTTATCATTAATATATGAAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATGGAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCC TTGAGCTGTGAATAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATCGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACATGTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCA ]
[-] EMBL CB641945 [ GGACGATACAAAGTCAGCAATCAAACTTTAGCATTTCCATAATTGATGGAGATGCGGATTTTCCCAAGTAAGTCACGTAGTTTATGTGTGTGGTCCATTGAGCTGTGAATAGCATTCCGAAATATCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAATTGATTCCATCCAGGAATACGGACAAAAGAAATAGGTTCCAATGTAGATAATGAAAAACACGTTAAGGAAGCATTAATTCAGCAAGAAAAGTTTCCAAAATCAATACAATTCTTGGCCAAGCTTGCAACTTCCC TTTTTTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13875#0 ATCAGTTTTCTTGGCCTGAACATTGCAAGAATTACTTGTCAAGGATATCAACTCTTGGCC 60
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 CAAGGCATCCTGCTTTTGCAAGCAATGAAGACCGGATTAAGGCACCTATTAAGGGAAGGA 120
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 AGCATGTCACTGTTATTGCTGTAGATTCTGTCAGTAAGGAAGATCTGATTCGCATTGTCA 180
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 GAAATTCTATCGAGGCTGCACGTAAAGAAAATTTGTCAGGATCGACAGGTTTTGTGTTGT 240
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 CAACTTCCCTGACAATAGGGGAGATACATTCTCTATTAATGTCTGCTGGCATGCTTCCTA 300
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 CTGATTTCGATGCTTTCATATGCAATAGTGGAAGTGATTTGTATTATCCTTCATGTACTG 360
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 GTGATACACCAAGCAACTCCCGTGTTACATTTGCATTAGATCGTAGTTACCAATCACATA 420
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 TAGAGTATCATTGGGGAGGAGAAGGTTTAAGGAAATATCTAGTGAAGTGGGCTTCTTCCG 480
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 TGGTAGAAAGAAGAGGGAGGATTGAAAAACAAGTTATCTTCGAAGATCCAGAGCACTCTT 540
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 CAACATACTGTCTTGCATTTAAAGTGGTCAATCCAAATCATTTACCTCCTTTAAAGGAGC 600
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 TGCAAAAGTTGATGAGAATTCAGTCACTCCGTTGTCACGCTCTGTATAACCATGGTGCTA 660
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 CCAGACTATCTGTAATTCCAATCCACGCATCACGGTCTAAGGCTCTAAGGTACTTATCTG 720
consensus_13875#1 ------------------------------------------------------------
consensus_13875#0 TTCGCTGGGGCATAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAG 780
consensus_13875#1 ------------TAGAGTTGCAAAATGTGGTGGTTCTTGTTGGTGAAACTGGTGATTCAG 48
************************************************
consensus_13875#0 ATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACA 840
consensus_13875#1 ATTACGAAGAATTGTTTGGAGGTCTTCATAAGACGGTCATCCTTAAGGGTGAATTCAACA 108
************************************************************
consensus_13875#0 CATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTG 900
consensus_13875#1 CATCTGCAAATAGAATCCATTCTGTTAGGCGGTATCCTTTACAAGATGTTGTTGCACTTG 168
************************************************************
consensus_13875#0 ATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGA 960
consensus_13875#1 ATAGCCCAAACATCATTGGAATTGAGGGTTATGGCACTGATGACATGAGGTCTGCTCTGA 228
************************************************************
consensus_13875#0 AACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATG 1020
consensus_13875#1 AACAACTGGATATACGGGCACAGTGACACCAAGCCCCCATCTGTTTATCATTAATATATG 288
************************************************************
consensus_13875#0 AAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATG 1080
consensus_13875#1 AAGAAAACCAGTGGACGATACAAAGACAGCAAACAAACACTAGCATTTCCATACTTGATG 348
************************************************************
consensus_13875#0 GAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCCTTGAGCTGTGAA 1140
consensus_13875#1 GAGATGCCGATTTTGCCATGTAAGTCATGTAGTTTATGTGTGTGGTCCTTGAGCTGTGAA 408
************************************************************
consensus_13875#0 TAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAAT 1200
consensus_13875#1 TAGCATTCCGAAATCTCATCCCATTGAGATTTTGGTATGTGGCAATTTTGGAGTAAAAAT 468
************************************************************
consensus_13875#0 CGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACAT 1260
consensus_13875#1 CGATTCCATCCAGGAATACGGACAAAAGAAATTGGTTACAATGTTGATAATGAAAAACAT 528
************************************************************
consensus_13875#0 GTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAG 1320
consensus_13875#1 GTTAAGGAAGCATTAATTCAGCAAGAAAAGCTTCCAAAATCACTACAATTCTTGGCCAAG 588
************************************************************
consensus_13875#0 CTTGCAATTTCCCTTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGAC 1380
consensus_13875#1 CTTGCAATTTCCCTTTTTTTGAAGTGGAAGCTTATGTTGTGTGTTTACTGCTGGGTGGAC 648
************************************************************
consensus_13875#0 CATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCG 1440
consensus_13875#1 CATATGGCCCTGGCAGCCCTTCTTTACTATGTTTACTCCAGGAGGGCTGCCTAGCTTTCG 708
************************************************************
consensus_13875#0 TGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCAAAGTTTTGTTGAGATCAAT 1500
consensus_13875#1 TGTAAGTATTGTTTGACACGATGGTTCATTCTATATATCCAAAGTTTTGTTGAGATCAAA 768
***********************************************************
consensus_13875#0 GCATTTATGTTGTTTGTCCTTGGATGGGCAAAGATTAGTACTAAAAAAAAGA 1552
consensus_13875#1 AAAAAAAAG------------------------------------------- 777
* * *
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||