Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13883 cluster # 13883       Sequences # 14       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13883#0 length = 1496 sequences # 1  
consensus_13883#1 length = 1225 sequences # 8  
consensus_13883#2 length = 1106 sequences # 2  
consensus_13883#3 length = 520 sequences # 1  
consensus_13883#4 length = 316 sequences # 2  

consensusID : consensus_13883#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1496
fasta sequence
                              [CTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGGGTGTATCTTTGGTTACTGATGTTGCCTTGCTGAATTAGCACTGCCTTGACACTTGCAGGGATGATTATCTAGTTGCCCTGTGGCATCTCGAATAGTCATGTACCAGTTACCTGACCTTTCGGTGATAATATTCTTTGATTTGTGGCTCATATGCTGTTGTTCTTAAGCAACCGTGTCCCGTAGCTCATCTAATTAACCTGGAGTTTGCCAGTGTTACGGGAGTCAATTTTGGATATGGAATGGCAGTGCATAGTCGGTTGATGCTTTGATATTTGATTTTAGCTTCACAATGCGATTTAGGCATACATTGTCTAATTTGGTCCATTTTATTGTTAGAGTTTATCCCTAAAATTTGGTCTATATATAGCTCTTTGATGCTTGTGAAGCACTGACAGATTCTGATAGTATCGATACATGATGAAAATGTTGGATTCATGTTGATACCATTTATATTTTATTATGACATGTAGGATCAGTGTTAAGCTCTTATGTACAATCTGATTGGGATTGCGTTTTGGTCTTAGTATTCATAAGTGTTGG]

[+] EMBL AK106322             [CTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGGGTGTATCTTTGGTTACTGATGTTGCCTTGCTGAATTAGCACTGCCTTGACACTTGCAGGGATGATTATCTAGTTGCCCTGTGGCATCTCGAATAGTCATGTACCAGTTACCTGACCTTTCGGTGATAATATTCTTTGATTTGTGGCTCATATGCTGTTGTTCTTAAGCAACCGTGTCCCGTAGCTCATCTAATTAACCTGGAGTTTGCCAGTGTTACGGGAGTCAATTTTGGATATGGAATGGCAGTGCATAGTCGGTTGATGCTTTGATATTTGATTTTAGCTTCACAATGCGATTTAGGCATACATTGTCTAATTTGGTCCATTTTATTGTTAGAGTTTATCCCTAAAATTTGGTCTATATATAGCTCTTTGATGCTTGTGAAGCACTGACAGATTCTGATAGTATCGATACATGATGAAAATGTTGGATTCATGTTGATACCATTTATATTTTATTATGACATGTAGGATCAGTGTTAAGCTCTTATGTACAATCTGATTGGGATTGCGTTTTGGTCTTAGTATTCATAAGTGTTGG]


>consensus_13883#0 CTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCT CTGCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGG CGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGC CGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCAT CTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGT GCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTC CAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCC CGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGT GCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCA GCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCGCGC CCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGA GTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTT CCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAG TGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCT GAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGC ATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGGGTGT ATCTTTGGTTACTGATGTTGCCTTGCTGAATTAGCACTGCCTTGACACTTGCAGGGATGA TTATCTAGTTGCCCTGTGGCATCTCGAATAGTCATGTACCAGTTACCTGACCTTTCGGTG ATAATATTCTTTGATTTGTGGCTCATATGCTGTTGTTCTTAAGCAACCGTGTCCCGTAGC TCATCTAATTAACCTGGAGTTTGCCAGTGTTACGGGAGTCAATTTTGGATATGGAATGGC AGTGCATAGTCGGTTGATGCTTTGATATTTGATTTTAGCTTCACAATGCGATTTAGGCAT ACATTGTCTAATTTGGTCCATTTTATTGTTAGAGTTTATCCCTAAAATTTGGTCTATATA TAGCTCTTTGATGCTTGTGAAGCACTGACAGATTCTGATAGTATCGATACATGATGAAAA TGTTGGATTCATGTTGATACCATTTATATTTTATTATGACATGTAGGATCAGTGTTAAGC TCTTATGTACAATCTGATTGGGATTGCGTTTTGGTCTTAGTATTCATAAGTGTTGG



consensusID : consensus_13883#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1225
fasta sequence
                              [CTCATCAGATCCACACCCATCCTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA-GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG-CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG-CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTCATTTATGTTTTATGATTTGTCTGCTGATTAAGCTTTATGTTGCTGTTCAATACGCATGCT]

[+] EMBL AK058481             [CTCATCAGATCCACACCCATCCTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTCATTTATGTTTTATGATTTGTCTGCTG                                  ]
[+] EMBL AK102579             [                    CCTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTC                                                            ]
[+] EMBL AK099100             [                      TCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAGCATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCAACCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTCATTT                                                        ]
[+] EMBL CB685339             [                           ACCCCCCTAGAGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCTGCTA GGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCCGCGCCCGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK061324             [                                                                          TCTCTCTCTGCTAGGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTCATTTATGTTTTATGATTTGTCTGCTGATTAAGCTTTATGTTGCTGTTCAATACGCATGCT]
[+] EMBL CA756360             [                                                                                                                                                                                                              GCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACNAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCTTCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCANCANGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCCAGGCTGAGCAGGAAAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK059483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCG CCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGG CCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTAAGACTC                                                            ]
[+] EMBL BG101700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GACAATGGCCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAATAAGTTCTGGGTCTA                                                                  ]


>consensus_13883#1 CTCATCAGATCCACACCCATCCTCCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCA CTTCTCTCTCAATCTCTCTCTCTGCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAG ACGAGAGAGCGCCATGGCCGGCGGTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAA GGCGGCGGCGGGGCTCGGCGCCGCGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGA CGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGG CGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCAC GCGCCCCCACAACTTCTCCTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCAC CCTCCGCCTCCTCTCCCGCCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGG CCTCGAGTACGACGACAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGT CGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCG CGACGCCCTCATCCGCCGCGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCAC CCACCTCTCCTACGGCATCGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCA GGAGGCCGAGCGCTCCAAGTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCAT CGTGCGCGCGGAGGGAGAGAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGC TGGGACAGGGCTGATTGAGCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCT GGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGG CCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCC CAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTG CTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATC CAAATAAGTTCTGGGTCTAAGACTCATTTATGTTTTATGATTTGTCTGCTGATTAAGCTT TATGTTGCTGTTCAATACGCATGCT



consensusID : consensus_13883#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1106
fasta sequence
                              [TTCCCAAACAATCCCCCACCGGAAAAGCAGGCGAACCCCCATCCATCGGGATCCATGGCCGGCGGCGGGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGGCCGGGCTGGGCATCGCGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGCAGCGCGCCGTGGTCTTCGACCGGTTCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCACCCACTTCATCGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGCACAGCTTCTCCTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCGTCCTCGCGCGCCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGTACGACGAGAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCCTCATCCGCCGCGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCGCCTACGGCCCGGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGGTCCAGGTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCGCCGAGGGGGAGAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCGGCCAGATCGAGCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCTCCCCCAATGTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGGTGAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCACTTCATGGTATTATTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAATTGCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACCACTGCAATGCAGGAATCTTATATTTAG]

[+] EMBL AK108467             [TTCCCAAACAATCCCCCACCGGAAAAGCAGGCGAACCCCCATCCATCGGGATCCATGGCCGGCGGCGGGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGGCCGGGCTGGGCATCGCGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGCAGCGCGCCGTGGTCTTCGACCGGTTCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCACCCACTTCATCGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGCACAGCTTCTCCTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCGTCCTCGCGCGCCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGTACGACGAGAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGACCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCCTCATCCGCCGCGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCGCCTACGGCCCGGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGGTCCAGGTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCGCCGAGGGGGAGAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCGGCCAGATCGAGCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCTCCCCCAATGTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGGTGAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCACTTCATGGTATTATTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAATTGCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACCACTGCAATGCAGGAATCTTATAT    ]
[+] EMBL CA764231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aaGCTCCCCCAATGTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGGTGAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCACTTCATGGTATTATTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAATTGCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACTACTGCAATGCAGGAATCTTATATTTAG]


>consensus_13883#2 TTCCCAAACAATCCCCCACCGGAAAAGCAGGCGAACCCCCATCCATCGGGATCCATGGCC GGCGGCGGGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGGCCGGGCTG GGCATCGCGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGCAGCGCGCC GTGGTCTTCGACCGGTTCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCACCCACTTC ATCGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGCACAGCTTC TCCTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCGTCCTCGCG CGCCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGTACGACGAG AAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCC GACCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCCTCATCCGC CGCGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCGCCTACGGC CCGGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGGTCC AGGTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCGCCGAGGGG GAGAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCGGCCAGATC GAGCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCTCCCCCAAT GTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGG TGAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCAC TTCATGGTATTATTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAATT GCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACCA CTGCAATGCAGGAATCTTATATTTAG



consensusID : consensus_13883#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 520
fasta sequence
                              [ACATCATTCAGATACAAGGACAAACAAACAGNGATANTNTNGTNGTAATANGAANTTCCAAGCCACCCCCCAAGNGGGGGGAGACCAAATCCCCCAGTTCTNTCTCAATCTCTCTTTNNGNNAGGGTTNATCCTTCNGCGCCGCCGCCCCCGGAAGANGAGAGAGCGCCATGGCCGGCGGTCCCGCGGNGGTGTNGNNCAANANAAACATCGCCAAGGCGGCGGCGGGGCTNGGCGCCGCGGCCTCCNTCCTGTGGGNGTCGCTNNACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCNTTGTCTTGGACATCCGCACGCGCCCCCACAACTTNTCCTCCAACTCCGGCACCAAGGACGGGCAGATGGTCAACCTCACCNTCCGCCTCCTCTCCCGCCCANANGTCGTGTACCTCCCCTGGTGCCGAATTCGGCAGTGCTCAA]

[-] EMBL AA754503             [ACATCATTCAGATACAAGGACAAACAAACAGNGATANTNTNGTNGTAATANGAANTTCCAAGCCACCCCCCAAGNGGGGGGAGACCAAATCCCCCAGTTCTNTCTCAATCTCTCTTTNNGNNAGGGTTNATCCTTCNGCGCCGCCGCCCCCGGAAGANGAGAGAGCGCCATGGCCGGCGGTCCCGCGGNGGTGTNGNNCAANANAAACATCGCCAAGGCGGCGGCGGGGCTNGGCGCCGCGGCCTCCNTCCTGTGGGNGTCGCTNNACACCGTCGACGGCGGCGAGCGCGCCGTCATCTTCGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCCGTGGCTCCAGAAGCCNTTGTCTTGGACATCCGCACGCGCCCCCACAACTTNTCCTCCAACTCCGGCACCAAGGACGGGCAGATGGTCAACCTCACCNTCCGCCTCCTCTCCCGCCCANANGTCGTGTACCTCCCCTGGTGCCGAATTCGGCAGTGCTCAA]


>consensus_13883#3 ACATCATTCAGATACAAGGACAAACAAACAGNGATANTNTNGTNGTAATANGAANTTCCA AGCCACCCCCCAAGNGGGGGGAGACCAAATCCCCCAGTTCTNTCTCAATCTCTCTTTNNG NNAGGGTTNATCCTTCNGCGCCGCCGCCCCCGGAAGANGAGAGAGCGCCATGGCCGGCGG TCCCGCGGNGGTGTNGNNCAANANAAACATCGCCAAGGCGGCGGCGGGGCTNGGCGCCGC GGCCTCCNTCCTGTGGGNGTCGCTNNACACCGTCGACGGCGGCGAGCGCGCCGTCATCTT CGACCGGTTCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCCACTTCCTCGTGCC GTGGCTCCAGAAGCCNTTGTCTTGGACATCCGCACGCGCCCCCACAACTTNTCCTCCAAC TCCGGCACCAAGGACGGGCAGATGGTCAACCTCACCNTCCGCCTCCTCTCCCGCCCANAN GTCGTGTACCTCCCCTGGTGCCGAATTCGGCAGTGCTCAA



consensusID : consensus_13883#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 316
fasta sequence
                              [GGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTANTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGA]

[+] EMBL CF330083             [GGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTANTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAAAAA                                             ]
[-] EMBL CF330084             [ GCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTAGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTGTGATCCAAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGA]


>consensus_13883#4 GGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGG GGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTTCGGCCGGTGATCCGTCAC TCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGTTACATTAAACTGGAATGA TGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTTANTCTGGATGTCTTTGAA CGGAATGTGCTAATCTTTGTGATCCAAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTA CGTAGCGTATCGTTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13883#0      ----------------------------------------------------------CT 2
consensus_13883#3      ACATCATTCAGATACAAGGACAAACAAACAGNGATANTNTNGTNGTAATANGAANTTCCA 60
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      -------------------------------------CTCATCAGATCCACACCCATCCT 23
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCT 62
consensus_13883#3      AGCCACCCCCCAAGNGG-GGGGAGACCAAATCCCCCAGTTCTNTCTCAATCTCTCTTTNN 119
consensus_13883#2      --------------------------------------TTCCCAAACAATCCCCCACCGG 22
consensus_13883#1      CCCCACCCCCCAAGCGGCGGCGAGACCAAATCCCCCACTTCTCTCTCAATCTCTCTCTCT 83
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCG 122
consensus_13883#3      GNNAGGGTTNATCCTTCNGCGCCGCCGCCCCCGGAAGANGAGAGAGCGCCATGGCCGGCG 179
consensus_13883#2      AAAAGCAGGCGAACCCCCAT-------CCATCGGGATCCATG-----GCC---GGCGGCG 67
consensus_13883#1      GCTAGGGTTTATCCCTCCGCGCCGCCGCCCCCGGAAGACGAGAGAGCGCCATGGCCGGCG 143
consensus_13883#4      ----------------------------------GGCCAGGGAGATTGCT--GCCGAGCT 24
                                                                *     **        ** 

consensus_13883#0      GTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCG 182
consensus_13883#3      GTCCCGCGGNGGTGTNGNNCAANANAAACATCGCCAAGGCGGCGGCGGGGCTNGGCGCCG 239
consensus_13883#2      GGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGGCCGGGCTGGGCATCG 127
consensus_13883#1      GTCCCGCGGCGGTGTCGTTCCTGACCAACATCGCCAAGGCGGCGGCGGGGCTCGGCGCCG 203
consensus_13883#4      GGCCCGTTCTCCTAATGTTGCATACGTTCCTGCTGGGGACAATGGCCGGAT---GCTGCT 81
                       * *  *          *      *      *      * *   *** **     **  * 

consensus_13883#0      CGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCT 242
consensus_13883#3      CGGCCTCCNTCCTGTGGGNGTCGCTNNACACCGTCGACGGCGGCGAGCGCGCCGTCATCT 299
consensus_13883#2      CGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGCAGCGCGCCGTGGTCT 187
consensus_13883#1      CGGCCTCCCTCCTGTCGGCGTCGCTCTACACCGTCGACGGCGGCGAGCGCGCCGTCATCT 263
consensus_13883#4      CGGCCTCAACGCTGCCGGGTTCGGCCGGTG--ATCCGTCACTCCAATTTTACCCCTTTAG 139
                       **** **      *  *    **          *      *    *     **    *  

consensus_13883#0      TCGACCGGT--TCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCC---ACTTCCT 297
consensus_13883#3      TCGACCGGT--TCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCC---ACTTCCT 354
consensus_13883#2      TCGACCGGT--TCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCACCC---ACTTCAT 242
consensus_13883#1      TCGACCGGT--TCCGCGGGGTGCTCCCGGAGACCGTCGGCGAGGGGACCC---ACTTCCT 318
consensus_13883#4      TTGCCCAGGCATCCGCTCTGTGTTACATTAAACTG-GAATGATGGTATGGGGAATTATGT 198
                       * * ** *   *****   *** * *   * **       ** ** *      * *   *

consensus_13883#0      CGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTC 357
consensus_13883#3      CGTGCCGTGGCTCCAGAAGCCNTT-GTCTTGGACATCCGCACGCGCCCCCACAACTTNTC 413
consensus_13883#2      CGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGCACAGCTTCTC 302
consensus_13883#1      CGTGCCGTGGCTCCAGAAGCCCTTCGTCTTCGACATCCGCACGCGCCCCCACAACTTCTC 378
consensus_13883#4      TATCTGCTACTTTTGGTAATATTT-ANTCTGGATGTCT--------TTGAACGGAATGTG 249
                         *    *   *   * *    **     * **  **             **    * * 

consensus_13883#0      CTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCG 417
consensus_13883#3      CTCCAACTCCGGCACCAAGGACGGGCAGATGGTCAACCTCACCNTCCGCCTCCTCTCCCG 473
consensus_13883#2      CTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCGTCCTCGCGCG 362
consensus_13883#1      CTCCAACTCCGGCACCAAGGACCTGCAGATGGTCAACCTCACCCTCCGCCTCCTCTCCCG 438
consensus_13883#4      CTA-ATCTTTGTGATCCAAAAAAAAAAAAAAAAAAACAATGTCATGC----CGTTACGTA 304
                       **  * **  *  * * *  *     * *     * *     * * *    * *  *   

consensus_13883#0      CCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAA 477
consensus_13883#3      CCCANANGTCGTGTACCTCCCC-TGGTGCCGAATTCGGCAGTGCTCAA------------ 520
consensus_13883#2      CCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGTACGACGAGAA 422
consensus_13883#1      CCCCGACGTCGTGCACCTCCCCACCATCTTCACCTCCCTCGGCCTCGAGTACGACGACAA 498
consensus_13883#4      GCGTATCGTTGA------------------------------------------------ 316
                        *      * *                                                 

consensus_13883#0      GGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGA 537
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGA 482
consensus_13883#1      GGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTCAACGCCGA 558
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCG 597
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      CCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCCTCATCCGCCG 542
consensus_13883#1      CCAGCTCCTCACCGAGCGGCCCCACGTCTCAGCCCTCGTCCGCGACGCCCTCATCCGCCG 618
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCAT 657
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      CGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCGCCTACGGCCC 602
consensus_13883#1      CGCCCGCGAGTTCAACATCATCCTCGACGACGTCGCCATCACCCACCTCTCCTACGGCAT 678
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAA 717
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGGTCCAG 662
consensus_13883#1      CGAGTTCTCGCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAGCGCTCCAA 738
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGA 777
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCGCCGAGGGGGA 722
consensus_13883#1      GTTCCTCGTGGCCAAGGCTGAGCAGGAGAGGCGCGCGGCCATCGTGCGCGCGGAGGGAGA 798
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGA 837
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCGGCCAGATCGA 782
consensus_13883#1      GAGTGAGTCCGCGCGGCTCATTTCTGAGGCCACCGCCGCCGCTGGGACAGGGCTGATTGA 858
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGT 897
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      GCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCTCCCCCAATGT 842
consensus_13883#1      GCTGAGGAGGATCGAGGCGGCCAGGGAGATTGCTGCCGAGCTGGCCCGTTCTCCTAATGT 918
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGG- 956
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      CTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGCGCTCGGT- 901
consensus_13883#1      TGCATACGTTCCTGCTGGGGACAATGGCCGGATGCTGCTCGGCCTCAACGCTGCCGGGTT 978
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      -GTGTATCTT-TGGTTACTGATGTTGCCTTGCTGAATTAGCACTGCCTTGACACTTGCAG 1014
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      -GAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTTATTATCAC 960
consensus_13883#1      CGGCCGGTGATCCGTCACTCCAATTTTACCCCTTTAGTTGCCCAGGCATCCGCTCTGTGT 1038
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GGATGATTATCT-AGTTGCCCTGTGGCATCTCGAATAGTCATGTACCAGTTACCTGACCT 1073
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      TTCATGGTATTA-TTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTCGAACAAT 1019
consensus_13883#1      TACATTAAACTGGAATGATGGTATGGGGAATTATGTTATCTGCTACTTTTGGTAATATTT 1098
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TTCGGTGATAATATTCTTTGATTTGTG-GCTCATATGCTGTTGTTCTTAAGCAACCGTGT 1132
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      TGCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCCTTCAACC 1079
consensus_13883#1      AGTCTGGATGTCTTTGAACGGAATGTGCTAATCTTTG-TGATCCAAATAAGTTCTGGGTC 1157
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      CCCGTAGCTCATCTAATTAACCTGGAGTTTGCCAGTGTTACGGGAGTCAATTTTGGATAT 1192
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ACTGCAATGCAGGAATCTTATATTTAG--------------------------------- 1106
consensus_13883#1      TAAGACTCATTTATGTTTTATGATTTGTCTGCTGATTAAGCTTTATGTTGCTGTTCAATA 1217
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GGAATGGCAGTGCATAGTCGGTTGATGCTTTGATATTTGATTTTAGCTTCACAATGCGAT 1252
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      CGCATGCT---------------------------------------------------- 1225
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TTAGGCATACATTGTCTAATTTGGTCCATTTTATTGTTAGAGTTTATCCCTAAAATTTGG 1312
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      ------------------------------------------------------------
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TCTATATATAGCTCTTTGATGCTTGTGAAGCACTGACAGATTCTGATAGTATCGATACAT 1372
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      ------------------------------------------------------------
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      GATGAAAATGTTGGATTCATGTTGATACCATTTATATTTTATTATGACATGTAGGATCAG 1432
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      ------------------------------------------------------------
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TGTTAAGCTCTTATGTACAATCTGATTGGGATTGCGTTTTGGTCTTAGTATTCATAAGTG 1492
consensus_13883#3      ------------------------------------------------------------
consensus_13883#2      ------------------------------------------------------------
consensus_13883#1      ------------------------------------------------------------
consensus_13883#4      ------------------------------------------------------------
                                                                                   

consensus_13883#0      TTGG 1496
consensus_13883#3      ----
consensus_13883#2      ----
consensus_13883#1      ----
consensus_13883#4      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)