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Oryza sativa
cluster # 13912 cluster # 13912       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13912#0 length = 1066 sequences # 13  
consensus_13912#1 length = 692 sequences # 1  

consensusID : consensus_13912#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1066
fasta sequence
                              [TAATATCCATATCCGAAATGACCAAGCATGACCACGAACACCCGCTCTCCCATATCTCGTCTTTCACATAGTTTCATCTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTA-T-CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCGAGACTGAAGTATCAAACTGTGTCAACTGCGAT-GGGGTT-GGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACTAAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCATAATCTGGAGAGGTGCACATTTGAGAATTGATCTGATAGTTTTGTGTTGTATTATATGTCCATTTTTGGTAAATATGTATGTATGTCTTCTGAAGCGTCTGAAAAAAATGGAGGCCCTTTATAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAAGTTGTAGTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTAGCCTACAACAATAGTGCAATACAACCTTTTGATGCCTTCTTTTTTTAAAAAA]

[+] EMBL AK061036             [TAATATCCATATCCGAAATGACCAAGCATGACCACGAACACCCGCTCTCCCATATCTCGTCTTTCACATAGTTTCATCTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTA T CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCGAGACTGAAGTATCAAACTGTGTCAACTGCGAT GGGGTT GGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACTAAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCATAATCTGGAGAGGTGCACATTTGAGAATTGATCTGATAGTTTTGTGTTGTATTATATGTCCATTTTTGGTAAATATGTATGTATGTCTTCTGAAGCGTCTGAAAAAAATGGAGGCCCTTTATAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAAGTTGTAGTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTAGCCTACAACAATAGTGCAATACAACCTTTTGATGCCT               ]
[+] EMBL CF332838             [                                         CCGCTCTCCCATATCTCGTCTTT ACATAGTTTCATCTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTATT CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCGAGACTGAAGTATCAAACTGTGTCAACTGCGATGGGGGGT GGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCAC                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK104109             [                                          CGCTCTCCCATATCTCGTCTTTCACATAGTTTCATCTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTA T CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCGAGACTGAAGTATCAAACTGTGTCAACTGCGAT GGGGTT GGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACTAAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCATAATCTGGAGAGGTGCACATTTGAGAATTGATCTGATAGTTTTGTGTTGTATTATATGTCCATTTTTGGTAAATATGTATGTATGTCTTCTGAAGCGTCTGAAAAAAATGGAGGCCCTTTATAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAAGTTGTAGTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTAGCCTACAACAATAGTGCAATACAACCTTTTGATGCCT               ]
[+] EMBL CF302188             [                                                   ATATCTCGTCTTT ACATAGTTTCATCTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTATCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF305256             [                                                     ATCTCGTCTTTC CATAGTTTCATCTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTATGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTA T CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF298896             [                                                              TTTACATAGTTTCATCTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF305275             [                                                                             CTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCTGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTA T CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF333422             [                                                                                          CAGGTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTA TCCCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCGAGACTG AGTATCAAACTGTGTCAACTGCGATGGGGGTTGGGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCACGCT                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF322064             [                                                                                             GTATACCTTAGCGTTCCATTCAGAGATTTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGCCGTCAGCGTTGCCATCGGCATCGGTA T CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF302445             [                                                                                                                    gagtagaaaATGTTCTCTT CATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTA T CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF302548             [                                                                                                                                     TTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATCTTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGGTTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTA T CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCGAGACTGAAGTATCAAACTGTGTCAACTGCGATGGGGGTT GGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCAC                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CF302448             [                                                                                                                                                                                                                                                                                                                                                                                                                     CGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTA T CCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCGAGACTGAAGTATCAAACTGTGTCAACTGCGAT GGGGTT GGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACTAAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCATAATCTGGAGAGGTGCACATTTGAGAATTGATCTGATAGTTTTGTGTTGTATTATATGTCCATTTTTGGTAAATATGTATGTATGTCTTCTGAAGCGTCTGAAAAAAATGGAGGCCCTTTAT ATTCCAGCAGAGAAAAATGGCTGTTC                                                                                                                                          ]
[-] EMBL CF302189             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGAT GGGGTT GGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACTAAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCATAATCTGGAGAGGTGCACATTTGAGAATTGATCTGATAGTTTTGTGTTGTATTATATGTCCATTTTTGGTAAATATGTATGTATGTCTTCTGAAGCGTCTGAAAAAAATGGAGGCCCTTTATAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAAGTTGTAGTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTAGCCTACAACAATAGTGCAATACAACCTTTTGATGCCTTCTTTTTTTAAAAAA]


>consensus_13912#0 TAATATCCATATCCGAAATGACCAAGCATGACCACGAACACCCGCTCTCCCATATCTCGT CTTTCACATAGTTTCATCTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGAT TTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATC TTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGG TTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGT TCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCG GCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATAT CGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTATCCCGGTGTTCTACGAGACACAGA TCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGG CACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCG AGACTGAAGTATCAAACTGTGTCAACTGCGATGGGGTTGGCTCGTTGACATGCACCACAT GTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACT AAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCAT AATCTGGAGAGGTGCACATTTGAGAATTGATCTGATAGTTTTGTGTTGTATTATATGTCC ATTTTTGGTAAATATGTATGTATGTCTTCTGAAGCGTCTGAAAAAAATGGAGGCCCTTTA TAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAAGTTGTA GTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTAGCCTAC AACAATAGTGCAATACAACCTTTTGATGCCTTCTTTTTTTAAAAAA



consensusID : consensus_13912#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 692
fasta sequence
                              [CTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTATCCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCGAGACTGAAGTATCAAACTGTGTCAACTGCGATGGGGTTGGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACTAAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCATAATCTGGAGAGCGTCTGAAAAAAATGGAGGCCCTTTATAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAAGTTGTAGTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTAGCCTACAACAATAGTGCATTACAACCTTTTGA]

[+] EMBL BF430457             [CTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTATCCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCGAGACTGAAGTATCAAACTGTGTCAACTGCGATGGGGTTGGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACTAAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCATAATCTGGAGAGCGTCTGAAAAAAATGGAGGCCCTTTATAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAAGTTGTAGTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTAGCCTACAACAATAGTGCATTACAACCTTTTGA]


>consensus_13912#1 CTCGCCGCTCACAGCCCTATACTCCTCGTTCCTCTCATATACTCCTTCCACGCCATCCAT GGCGGCGCTGCCCCGGCGGCGAAGGGCCGGCTGCCGCTACCCTCGTATCCAGGCCGTCGA TCTCGACCAGAACACGATCGTGGCGATATCGGTCGGCGTCGTCAGCGTTGCCATCGGCAT CGGTATCCCGGTGTTCTACGAGACACAGATCGACAATGCCGCGAAGAGGGATAACACACA GCCGTGCTTCCCCTGCAGTGGCTCTGGGGCACAGGTGTGCAGGTTTTGCACCGGGAAGGG AACAGTTACTGTAGTGATCGGCGGAGGCGAGACTGAAGTATCAAACTGTGTCAACTGCGA TGGGGTTGGCTCGTTGACATGCACCACATGTCAAGGCTCTGGAATTCAACCACGCTATCT TGACCGCAGGGAATTCAAGGATGACGACTAAGGGTTTTGTTATTGCTAATGATGGTATGC CATATTATTGTCTGATCTGACAACGCCATAATCTGGAGAGCGTCTGAAAAAAATGGAGGC CCTTTATAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAA GTTGTAGTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTA GCCTACAACAATAGTGCATTACAACCTTTTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13912#0      TAATATCCATATCCGAAATGACCAAGCATGACCACGAACACCCGCTCTCCCATATCTCGT 60
consensus_13912#1      ------------------------------------------------------------
                                                                                   

consensus_13912#0      CTTTCACATAGTTTCATCTTCTCCTATCCACAGGTATACCTTAGCGTTCCATTCAGAGAT 120
consensus_13912#1      ------------------------------------------------------------
                                                                                   

consensus_13912#0      TTGGCATGTTCTCTTCCATGCACTGCTGCCTCCCTTGATGTGCAGCAGGAGCTGTTCATC 180
consensus_13912#1      ------------------------------------------------------------
                                                                                   

consensus_13912#0      TTTACTCCTTTAGGAGTTCTTCAGATTGATCAGAGGCAGTAGCCAGCCCATTAGACAAGG 240
consensus_13912#1      ------------------------------------------------------------
                                                                                   

consensus_13912#0      TTACGCATTCAGGCGCCATGGCCACCTCCTCCTCGCCGCTCACAGCCCTATACTCCTCGT 300
consensus_13912#1      -------------------------------CTCGCCGCTCACAGCCCTATACTCCTCGT 29
                                                      *****************************

consensus_13912#0      TCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCG 360
consensus_13912#1      TCCTCTCATATACTCCTTCCACGCCATCCATGGCGGCGCTGCCCCGGCGGCGAAGGGCCG 89
                       ************************************************************

consensus_13912#0      GCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATAT 420
consensus_13912#1      GCTGCCGCTACCCTCGTATCCAGGCCGTCGATCTCGACCAGAACACGATCGTGGCGATAT 149
                       ************************************************************

consensus_13912#0      CGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTATCCCGGTGTTCTACGAGACACAGA 480
consensus_13912#1      CGGTCGGCGTCGTCAGCGTTGCCATCGGCATCGGTATCCCGGTGTTCTACGAGACACAGA 209
                       ************************************************************

consensus_13912#0      TCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGG 540
consensus_13912#1      TCGACAATGCCGCGAAGAGGGATAACACACAGCCGTGCTTCCCCTGCAGTGGCTCTGGGG 269
                       ************************************************************

consensus_13912#0      CACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCG 600
consensus_13912#1      CACAGGTGTGCAGGTTTTGCACCGGGAAGGGAACAGTTACTGTAGTGATCGGCGGAGGCG 329
                       ************************************************************

consensus_13912#0      AGACTGAAGTATCAAACTGTGTCAACTGCGATGGGGTTGGCTCGTTGACATGCACCACAT 660
consensus_13912#1      AGACTGAAGTATCAAACTGTGTCAACTGCGATGGGGTTGGCTCGTTGACATGCACCACAT 389
                       ************************************************************

consensus_13912#0      GTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACT 720
consensus_13912#1      GTCAAGGCTCTGGAATTCAACCACGCTATCTTGACCGCAGGGAATTCAAGGATGACGACT 449
                       ************************************************************

consensus_13912#0      AAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCAT 780
consensus_13912#1      AAGGGTTTTGTTATTGCTAATGATGGTATGCCATATTATTGTCTGATCTGACAACGCCAT 509
                       ************************************************************

consensus_13912#0      AATCTGGAGAGGTGCACATTTGAGAATTGATCTGATAGTTTTGTGTTGTATTATATGTCC 840
consensus_13912#1      AATCTGGAGAG------------------------------------------------- 520
                       ***********                                                 

consensus_13912#0      ATTTTTGGTAAATATGTATGTATGTCTTCTGAAGCGTCTGAAAAAAATGGAGGCCCTTTA 900
consensus_13912#1      ----------------------------------CGTCTGAAAAAAATGGAGGCCCTTTA 546
                                                         **************************

consensus_13912#0      TAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAAGTTGTA 960
consensus_13912#1      TAATTCCAGCAGAGAAAAATGGCTGTTCTCCAGTGGACAATGCCGATGACTCAAGTTGTA 606
                       ************************************************************

consensus_13912#0      GTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTAGCCTAC 1020
consensus_13912#1      GTGTTAAACATTCTGCAAGGTACTGTCTGTTTTGACATGTCTTTATGAGTGTTAGCCTAC 666
                       ************************************************************

consensus_13912#0      AACAATAGTGCAATACAACCTTTTGATGCCTTCTTTTTTTAAAAAA 1066
consensus_13912#1      AACAATAGTGCATTACAACCTTTTGA-------------------- 692
                       ************ *************                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)